Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctioncalcium ion binding

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1 CRB2

1.05e-097494714GO:0005509
GeneOntologyMolecularFunctionN6-methyladenosine-containing RNA reader activity

YTHDF1 YTHDF3

5.58e-0415472GO:1990247
GeneOntologyBiologicalProcesscell-cell adhesion via plasma-membrane adhesion molecules

FGFRL1 PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1 CRB2

1.25e-163134615GO:0098742
GeneOntologyBiologicalProcesshomophilic cell adhesion via plasma membrane adhesion molecules

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

1.44e-161874613GO:0007156
GeneOntologyBiologicalProcesscell-cell adhesion

FGFRL1 PCDHGB2 PCDHGB1 MUC4 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1 CRB2

6.16e-1010774616GO:0098609
GeneOntologyBiologicalProcesspositive regulation of nuclear-transcribed mRNA poly(A) tail shortening

TNRC6B TNRC6C TNRC6A

3.71e-0614463GO:0060213
GeneOntologyBiologicalProcessregulation of nuclear-transcribed mRNA poly(A) tail shortening

TNRC6B TNRC6C TNRC6A

5.70e-0616463GO:0060211
GeneOntologyBiologicalProcessregulation of mRNA stability

YTHDF1 TNRC6B SENP1 TNRC6C YTHDF3 TNRC6A

4.45e-05292466GO:0043488
GeneOntologyBiologicalProcessregulation of mRNA metabolic process

YTHDF1 RBM5 TNRC6B SENP1 TNRC6C YTHDF3 TNRC6A

5.22e-05443467GO:1903311
GeneOntologyBiologicalProcessnuclear-transcribed mRNA poly(A) tail shortening

TNRC6B TNRC6C TNRC6A

5.40e-0533463GO:0000289
GeneOntologyBiologicalProcessregulation of RNA stability

YTHDF1 TNRC6B SENP1 TNRC6C YTHDF3 TNRC6A

5.98e-05308466GO:0043487
GeneOntologyBiologicalProcessregulation of mRNA catabolic process

YTHDF1 TNRC6B SENP1 TNRC6C YTHDF3 TNRC6A

6.09e-05309466GO:0061013
GeneOntologyBiologicalProcessmRNA destabilization

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

9.30e-05206465GO:0061157
GeneOntologyBiologicalProcessRNA destabilization

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.04e-04211465GO:0050779
GeneOntologyBiologicalProcesspositive regulation of mRNA catabolic process

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.04e-04211465GO:0061014
GeneOntologyBiologicalProcessmRNA catabolic process

YTHDF1 TNRC6B SENP1 TNRC6C YTHDF3 TNRC6A

1.71e-04373466GO:0006402
GeneOntologyBiologicalProcessneuroblast differentiation

DLX1 NFIX

2.16e-0410462GO:0014016
GeneOntologyBiologicalProcesspositive regulation of mRNA metabolic process

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.70e-04259465GO:1903313
GeneOntologyBiologicalProcessdiaphragm development

GATA4 FGFRL1

3.17e-0412462GO:0060539
GeneOntologyBiologicalProcessregulation of axon guidance

YTHDF1 MYCBP2

3.17e-0412462GO:1902667
GeneOntologyBiologicalProcessnegative regulation of response to biotic stimulus

NR1H3 USP38 MUC4 YTHDF3

3.55e-04151464GO:0002832
GeneOntologyBiologicalProcessRNA catabolic process

YTHDF1 TNRC6B SENP1 TNRC6C YTHDF3 TNRC6A

3.76e-04432466GO:0006401
GeneOntologyBiologicalProcessnuclear-transcribed mRNA catabolic process, deadenylation-dependent decay

TNRC6B TNRC6C TNRC6A

4.12e-0465463GO:0000288
GeneOntologyBiologicalProcessatrioventricular canal development

GATA4 NFIX

4.35e-0414462GO:0036302
GeneOntologyBiologicalProcessnucleic acid catabolic process

YTHDF1 TNRC6B SENP1 TNRC6C YTHDF3 TNRC6A

5.48e-04464466GO:0141188
GeneOntologyBiologicalProcesspositive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay

TNRC6B TNRC6C

5.72e-0416462GO:1900153
GeneOntologyBiologicalProcessnegative regulation of protein metabolic process

TNRC6B NR1H3 SENP1 TNRC6C USP38 MYCBP2 PARD6A CRB2 TNRC6A

5.76e-041088469GO:0051248
GeneOntologyBiologicalProcessnegative regulation of DNA-templated transcription

GATA4 ZBTB10 CELA1 NR1H3 DLX1 RCOR1 MIDEAS NFIX WWP1 ZNF746

8.57e-0413994610GO:0045892
GeneOntologyBiologicalProcessmRNA metabolic process

YTHDF1 RBM5 TNRC6B NR1H3 SENP1 TNRC6C YTHDF3 TNRC6A

8.59e-04917468GO:0016071
GeneOntologyBiologicalProcessnegative regulation of RNA biosynthetic process

GATA4 ZBTB10 CELA1 NR1H3 DLX1 RCOR1 MIDEAS NFIX WWP1 ZNF746

9.26e-0414134610GO:1902679
GeneOntologyBiologicalProcessendoderm development

GATA4 TNRC6C TNRC6A

9.98e-0488463GO:0007492
GeneOntologyCellularComponentP-body

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.93e-06102465GO:0000932
GeneOntologyCellularComponentcytoplasmic ribonucleoprotein granule

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

3.03e-04269465GO:0036464
GeneOntologyCellularComponentribonucleoprotein granule

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

4.07e-04287465GO:0035770
MousePhenoabnormal diaphragm morphology

GATA4 FGFRL1 PBX1 MYCBP2

3.25e-0578334MP:0002279
MousePhenodiaphragmatic hernia

GATA4 FGFRL1 PBX1

4.20e-0529333MP:0003924
MousePhenoabnormal nephrogenic mesenchyme morphogenesis

FGFRL1 PBX1

5.38e-055332MP:0010987
DomainCadherin_tail

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

8.94e-26374713PF15974
DomainCadherin_CBD

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

8.94e-26374713IPR031904
DomainCadherin_C_2

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

6.35e-25424713PF16492
DomainCadherin_C

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

6.35e-25424713IPR032455
DomainCadherin_N

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

3.93e-22654713IPR013164
DomainCadherin_2

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

3.93e-22654713PF08266
DomainCadherin_CS

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

5.19e-191094713IPR020894
DomainCadherin

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

8.47e-191134713PF00028
DomainCADHERIN_1

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

8.47e-191134713PS00232
DomainCADHERIN_2

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

9.54e-191144713PS50268
Domain-

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

9.54e-1911447132.60.40.60
DomainCA

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

1.07e-181154713SM00112
DomainCadherin-like

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

1.21e-181164713IPR015919
DomainCadherin

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

1.52e-181184713IPR002126
DomainAgo_hook

TNRC6B TNRC6C TNRC6A

1.49e-083473PF10427
DomainTNRC6-PABC_bdg

TNRC6B TNRC6C TNRC6A

1.49e-083473PF16608
DomainTNRC6_PABC-bd

TNRC6B TNRC6C TNRC6A

1.49e-083473IPR032226
DomainArgonaute_hook_dom

TNRC6B TNRC6C TNRC6A

1.49e-083473IPR019486
DomainM_domain

TNRC6C TNRC6A

6.20e-062472PF12938
DomainGW182_M_dom

TNRC6C TNRC6A

6.20e-062472IPR026805
DomainYTH

YTHDF1 YTHDF3

6.17e-055472PS50882
DomainYTH_domain

YTHDF1 YTHDF3

6.17e-055472IPR007275
DomainYTH

YTHDF1 YTHDF3

6.17e-055472PF04146
DomainELM2

RCOR1 MIDEAS

4.75e-0413472SM01189
DomainELM2

RCOR1 MIDEAS

4.75e-0413472PF01448
DomainELM2

RCOR1 MIDEAS

4.75e-0413472PS51156
DomainELM2_dom

RCOR1 MIDEAS

4.75e-0413472IPR000949
DomainUBA-like

TNRC6B TNRC6C TNRC6A

5.59e-0464473IPR009060
DomainSANT_dom

RCOR1 MIDEAS

1.94e-0326472IPR017884
DomainSANT

RCOR1 MIDEAS

2.25e-0328472PS51293
DomainRRM

RBM5 TNRC6B TNRC6C TNRC6A

2.64e-03230474PS50102
Domain-

RBM5 TNRC6B TNRC6C TNRC6A

3.26e-032444743.30.70.330
DomainMyb_DNA-binding

RCOR1 MIDEAS

3.50e-0335472PF00249
DomainNucleotide-bd_a/b_plait

RBM5 TNRC6B TNRC6C TNRC6A

3.98e-03258474IPR012677
DomainMYB_LIKE

RCOR1 MIDEAS

4.11e-0338472PS50090
DomainSANT

RCOR1 MIDEAS

7.03e-0350472SM00717
DomainSANT/Myb

RCOR1 MIDEAS

7.59e-0352472IPR001005
Domain-

GATA4 NR1H3

9.06e-03574723.30.50.10
DomainZnf_NHR/GATA

GATA4 NR1H3

9.37e-0358472IPR013088
DomainHomeodomain-like

DLX1 RCOR1 PBX1 MIDEAS

9.59e-03332474IPR009057
PathwayREACTOME_POST_TRANSCRIPTIONAL_SILENCING_BY_SMALL_RNAS

TNRC6B TNRC6C TNRC6A

1.94e-077263M46421
PathwayREACTOME_REGULATION_OF_PTEN_MRNA_TRANSLATION

TNRC6B TNRC6C TNRC6A

4.64e-079263M27810
PathwayREACTOME_REGULATION_OF_NPAS4_MRNA_TRANSLATION

TNRC6B TNRC6C TNRC6A

4.64e-079263M46436
PathwayREACTOME_NR1H3_NR1H2_REGULATE_GENE_EXPRESSION_LINKED_TO_CHOLESTEROL_TRANSPORT_AND_EFFLUX

TNRC6B NR1H3 TNRC6C TNRC6A

5.76e-0737264M29790
PathwayREACTOME_REGULATION_OF_CDH11_MRNA_TRANSLATION_BY_MICRORNAS

TNRC6B TNRC6C TNRC6A

6.63e-0710263M48013
PathwayREACTOME_NR1H2_AND_NR1H3_MEDIATED_SIGNALING

TNRC6B NR1H3 TNRC6C TNRC6A

1.54e-0647264M29777
PathwayREACTOME_REGULATION_OF_NPAS4_GENE_EXPRESSION

TNRC6B TNRC6C TNRC6A

1.57e-0613263M46434
PathwayREACTOME_REGULATION_OF_RUNX1_EXPRESSION_AND_ACTIVITY

TNRC6B TNRC6C TNRC6A

3.72e-0617263M27788
PathwayREACTOME_REGULATION_OF_MITF_M_DEPENDENT_GENES_INVOLVED_IN_APOPTOSIS

TNRC6B TNRC6C TNRC6A

5.29e-0619263M48238
PathwayREACTOME_TGFBR3_EXPRESSION

TNRC6B TNRC6C TNRC6A

1.77e-0528263M48253
PathwayREACTOME_CELL_CELL_JUNCTION_ORGANIZATION

TNRC6B TNRC6C PARD6A TNRC6A

2.09e-0590264M820
PathwayREACTOME_REGULATION_OF_HOMOTYPIC_CELL_CELL_ADHESION

TNRC6B TNRC6C TNRC6A

2.67e-0532263M48012
PathwayREACTOME_REGULATION_OF_MECP2_EXPRESSION_AND_ACTIVITY

TNRC6B TNRC6C TNRC6A

2.67e-0532263M27900
PathwayREACTOME_TRANSCRIPTIONAL_REGULATION_BY_NPAS4

TNRC6B TNRC6C TNRC6A

3.21e-0534263M46422
PathwayREACTOME_ONCOGENE_INDUCED_SENESCENCE

TNRC6B TNRC6C TNRC6A

3.51e-0535263M27190
PathwayREACTOME_POST_TRANSCRIPTIONAL_SILENCING_BY_SMALL_RNAS

TNRC6B TNRC6A

4.88e-056262MM15083
PathwayREACTOME_TRANSCRIPTIONAL_REGULATION_BY_VENTX

TNRC6B TNRC6C TNRC6A

5.67e-0541263M29748
PathwayREACTOME_CELL_JUNCTION_ORGANIZATION

TNRC6B TNRC6C PARD6A TNRC6A

5.85e-05117264M19248
PathwayREACTOME_SIGNALING_BY_TGFBR3

TNRC6B TNRC6C TNRC6A

9.70e-0549263M48250
PathwayREACTOME_PTEN_REGULATION

TNRC6B RCOR1 TNRC6C TNRC6A

1.14e-04139264M27646
PathwayREACTOME_BETA_CATENIN_INDEPENDENT_WNT_SIGNALING

TNRC6B TNRC6C PARD6A TNRC6A

1.38e-04146264M27288
PathwayREACTOME_ADHERENS_JUNCTIONS_INTERACTIONS

TNRC6B TNRC6C TNRC6A

1.61e-0458263M11980
PathwayREACTOME_CELL_CELL_COMMUNICATION

TNRC6B TNRC6C PARD6A TNRC6A

1.74e-04155264M522
PathwayREACTOME_CA2_PATHWAY

TNRC6B TNRC6C TNRC6A

1.96e-0462263M27321
PathwayREACTOME_SIGNALING_BY_TGFB_FAMILY_MEMBERS

TNRC6B TNRC6C PARD6A TNRC6A

2.01e-04161264M27871
PathwayREACTOME_TRANSCRIPTIONAL_REGULATION_BY_MECP2

TNRC6B TNRC6C TNRC6A

2.06e-0463263M27862
PathwayREACTOME_TP53_REGULATES_METABOLIC_GENES

TNRC6B TNRC6C TNRC6A

4.81e-0484263M27495
PathwayREACTOME_MAPK6_MAPK4_SIGNALING

TNRC6B TNRC6C TNRC6A

6.47e-0493263M27572
PathwayREACTOME_MITF_M_DEPENDENT_GENE_EXPRESSION

TNRC6B TNRC6C TNRC6A

6.89e-0495263M48268
PathwayREACTOME_RUNX1_REGULATES_GENES_INVOLVED_IN_MEGAKARYOCYTE_DIFFERENTIATION_AND_PLATELET_FUNCTION

TNRC6B TNRC6C TNRC6A

7.10e-0496263M27792
PathwayWP_MAMMALIAN_DISORDER_OF_SEXUAL_DEVELOPMENT

GATA4 PBX1

9.56e-0425262M39896
PathwayREACTOME_SIGNALING_BY_NOTCH

TNRC6B TNRC6C PBX1 TNRC6A

1.00e-03246264M10189
PathwayREACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING

TNRC6B TNRC6C TNRC6A

1.32e-03119263M607
PathwayREACTOME_OXIDATIVE_STRESS_INDUCED_SENESCENCE

TNRC6B TNRC6C TNRC6A

1.52e-03125263M27186
PathwayREACTOME_SIGNALING_BY_NUCLEAR_RECEPTORS

TNRC6B NR1H3 TNRC6C TNRC6A

1.98e-03296264M27869
PathwayREACTOME_MITF_M_REGULATED_MELANOCYTE_DEVELOPMENT

TNRC6B TNRC6C TNRC6A

1.98e-03137263M48232
PathwayREACTOME_GENE_SILENCING_BY_RNA

TNRC6B TNRC6C TNRC6A

2.07e-03139263M715
PathwayWP_ENDODERM_DIFFERENTIATION

GATA4 TNRC6C PBX1

2.24e-03143263M39591
PathwayREACTOME_INTRACELLULAR_SIGNALING_BY_SECOND_MESSENGERS

TNRC6B RCOR1 TNRC6C TNRC6A

2.42e-03313264M27867
PathwayREACTOME_ESTROGEN_DEPENDENT_GENE_EXPRESSION

TNRC6B TNRC6C TNRC6A

2.52e-03149263M27888
PathwayREACTOME_SIGNALING_BY_WNT

TNRC6B TNRC6C PARD6A TNRC6A

2.93e-03330264M7847
PathwayREACTOME_GENE_SILENCING_BY_RNA

TNRC6B TNRC6A

3.65e-0349262MM14837
PathwayKEGG_ENDOCYTOSIS

PIKFYVE PARD6A WWP1

4.36e-03181263M1519
PathwayPID_TGFBR_PATHWAY

PARD6A WWP1

4.41e-0354262M286
PathwayREACTOME_CELLULAR_SENESCENCE

TNRC6B TNRC6C TNRC6A

5.51e-03197263M27188
Pubmed

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

3.29e-2568481311230163
Pubmed

A striking organization of a large family of human neural cadherin-like cell adhesion genes.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

7.42e-2572481310380929
Pubmed

Cadherin superfamily genes: functions, genomic organization, and neurologic diversity.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

1.09e-2474481310817752
Pubmed

Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

1.91e-2477481310835267
Pubmed

Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

3.27e-2480481310716726
Pubmed

Maturation of postnatally generated olfactory bulb granule cells depends on functional γ-protocadherin expression.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGA4 PCDHGA3

4.07e-231548923515096
Pubmed

Interaction with protocadherin-gamma regulates the cell surface expression of protocadherin-alpha.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGA4 PCDHGA3

5.54e-202848915347688
Pubmed

Functional significance of isoform diversification in the protocadherin gamma gene cluster.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGA4 PCDHGA3

4.19e-193448922884324
Pubmed

A differential developmental pattern of spinal interneuron apoptosis during synaptogenesis: insights from genetic analyses of the protocadherin-gamma gene cluster.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGA4 PCDHGA3

5.60e-184448919029045
Pubmed

Clustered gamma-protocadherins regulate cortical interneuron programmed cell death.

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGA4 PCDHGA3

7.01e-175748932633719
Pubmed

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons.

PCDHGB2 PCDHGA10 PCDHGA7 PCDHGA6 PCDHGA4 PCDHGA3

1.92e-105848630377227
Pubmed

Impact of scaffolding protein TNRC6 paralogs on gene expression and splicing.

TNRC6B TNRC6C TNRC6A

2.47e-09348334108231
Pubmed

Gawky is a component of cytoplasmic mRNA processing bodies required for early Drosophila development.

TNRC6B TNRC6C TNRC6A

2.47e-09348316880270
Pubmed

Expression of TNRC6 (GW182) Proteins Is Not Necessary for Gene Silencing by Fully Complementary RNA Duplexes.

TNRC6B TNRC6C TNRC6A

2.47e-09348331670606
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

RBM5 PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

5.35e-091442481435575683
Pubmed

Two PABPC1-binding sites in GW182 proteins promote miRNA-mediated gene silencing.

TNRC6B TNRC6C TNRC6A

9.86e-09448321063388
Pubmed

Differential expression of individual gamma-protocadherins during mouse brain development.

PCDHGA12 PCDHGA4 PCDHGA3

8.60e-08748315964765
Pubmed

The C-terminal domains of human TNRC6A, TNRC6B, and TNRC6C silence bound transcripts independently of Argonaute proteins.

TNRC6B TNRC6C TNRC6A

8.60e-08748319383768
Pubmed

Functional dissection of the human TNRC6 (GW182-related) family of proteins.

TNRC6B TNRC6C TNRC6A

8.60e-08748319470757
Pubmed

Human transcription factor protein interaction networks.

GATA4 ZBTB10 YTHDF1 TNRC6B RCOR1 TNRC6C PBX1 MIDEAS NFIX YTHDF3 ZNF746 TNRC6A

3.90e-071429481235140242
Pubmed

Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation.

TNRC6B TNRC6C TNRC6A

8.88e-071448319716330
Pubmed

GW182 proteins directly recruit cytoplasmic deadenylase complexes to miRNA targets.

TNRC6B TNRC6C TNRC6A

1.11e-061548321981923
Pubmed

Cytoplasmic m6A reader YTHDF3 promotes mRNA translation.

YTHDF1 YTHDF3

1.87e-06248228106076
Pubmed

Deletion of YTHDF1 (not YTHDF3) reduced brain and gut damage after traumatic brain injury.

YTHDF1 YTHDF3

1.87e-06248239081030
Pubmed

Role of GW182 protein in the cell.

TNRC6B TNRC6A

1.87e-06248229791863
Pubmed

Trinucleotide repeat containing 6a (Tnrc6a)-mediated microRNA function is required for development of yolk sac endoderm.

TNRC6B TNRC6C TNRC6A

3.73e-062248322187428
Pubmed

Trinucleotide repeat containing 6c (TNRC6c) is essential for microvascular maturation during distal airspace sacculation in the developing lung.

TNRC6B TNRC6C TNRC6A

4.29e-062348328811219
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

RBM5 TNRC6B FGFRL1 SENP1 TNRC6C PBX1 MYCBP2 PCDHGB1 NFIX SNX29 WWP1

4.47e-061489481128611215
Pubmed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.

PCDHGB2 PCDHGA10 PCDHGA3

4.89e-062448324698270
Pubmed

YTHDF3 facilitates translation and decay of N6-methyladenosine-modified RNA.

YTHDF1 YTHDF3

5.59e-06348228106072
Pubmed

YTHDF2 suppresses the plasmablast genetic program and promotes germinal center formation.

YTHDF1 YTHDF3

5.59e-06348235508130
Pubmed

Comprehensive Analysis of YTH Domain Family in Lung Adenocarcinoma: Expression Profile, Association with Prognostic Value, and Immune Infiltration.

YTHDF1 YTHDF3

5.59e-06348234497675
Pubmed

A Unified Model for the Function of YTHDF Proteins in Regulating m6A-Modified mRNA.

YTHDF1 YTHDF3

5.59e-06348232492408
Pubmed

m6A-binding YTHDF proteins promote stress granule formation.

YTHDF1 YTHDF3

5.59e-06348232451507
Pubmed

m6A enhances the phase separation potential of mRNA.

YTHDF1 YTHDF3

5.59e-06348231292544
Pubmed

N(6)-methyladenosine of HIV-1 RNA regulates viral infection and HIV-1 Gag protein expression.

YTHDF1 YTHDF3

5.59e-06348227371828
Pubmed

Interaction network of human early embryonic transcription factors.

GATA4 RCOR1 PBX1 MIDEAS YTHDF3 ZNF746

8.69e-0635148638297188
Pubmed

The b1 isoform of protocadherin-gamma (Pcdhgamma) interacts with the microtubule-destabilizing protein SCG10.

PCDHGB2 PCDHGB1

1.12e-05448215581637
Pubmed

The interactions of GW182 proteins with PABP and deadenylases are required for both translational repression and degradation of miRNA targets.

TNRC6C TNRC6A

1.12e-05448223172285
Pubmed

Structural basis of binding of P-body-associated proteins GW182 and ataxin-2 by the Mlle domain of poly(A)-binding protein.

TNRC6C TNRC6A

1.12e-05448220181956
Pubmed

N6-methyladenosine-dependent regulation of messenger RNA stability.

YTHDF1 YTHDF3

1.12e-05448224284625
Pubmed

The TRIM9/TRIM67 neuronal interactome reveals novel activators of morphogenesis.

YTHDF1 PIKFYVE TNRC6B TNRC6C TNRC6A

1.27e-0521848533378226
Pubmed

Genome-Wide CRISPR-Cas9 Screens Expose Genetic Vulnerabilities and Mechanisms of Temozolomide Sensitivity in Glioblastoma Stem Cells.

YTHDF1 TNRC6B YTHDF3 TNRC6A

1.48e-0510748430995489
Pubmed

Context-dependent functional compensation between Ythdf m6A reader proteins.

YTHDF1 YTHDF3

1.86e-05548232943573
Pubmed

Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps.

TNRC6B TNRC6C

1.86e-05548219838187
Pubmed

Brn-3b inhibits generation of amacrine cells by binding to and negatively regulating DLX1/2 in developing retina.

DLX1 PBX1

2.79e-05648221875655
Pubmed

Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.

YTHDF1 TNRC6B SENP1 MIDEAS YTHDF3 TNRC6A

3.83e-0545748632344865
Pubmed

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules.

YTHDF1 TNRC6B RCOR1 MYCBP2 YTHDF3 TNRC6A

4.07e-0546248631138677
Pubmed

A DDX6-CNOT1 complex and W-binding pockets in CNOT9 reveal direct links between miRNA target recognition and silencing.

TNRC6C TNRC6A

5.19e-05848224768540
Pubmed

The Eyes Absent family members EYA4 and EYA1 promote PLK1 activation and successful mitosis through tyrosine dephosphorylation.

TNRC6B TNRC6C MIDEAS TNRC6A

5.87e-0515248438360978
Pubmed

An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.

YTHDF1 PIKFYVE RBM5 TNRC6B MYCBP2 YTHDF3 TNRC6A

6.24e-0573348734672954
Pubmed

High-resolution photocatalytic mapping of SARS-CoV-2 spike interactions on the cell surface.

TNRC6B TNRC6C MYCBP2 PCDHGA4 TNRC6A

6.51e-0530748537499664
Pubmed

Frequent long-range epigenetic silencing of protocadherin gene clusters on chromosome 5q31 in Wilms' tumor.

PCDHGA12 PCDHGA6

6.67e-05948219956686
Pubmed

Molecular mechanisms governing Pcdh-gamma gene expression: evidence for a multiple promoter and cis-alternative splicing model.

PCDHGB2 PCDHGA12

6.67e-05948212154121
Pubmed

TNRC6 proteins modulate hepatitis C virus replication by spatially regulating the binding of miR-122/Ago2 complexes to viral RNA.

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

7.57e-0531748530997501
Pubmed

miRNA-mediated deadenylation is orchestrated by GW182 through two conserved motifs that interact with CCR4-NOT.

TNRC6C TNRC6A

8.33e-051048221984185
Pubmed

miRNA repression involves GW182-mediated recruitment of CCR4-NOT through conserved W-containing motifs.

TNRC6C TNRC6A

1.02e-041148221984184
Pubmed

TRIM24 is an insulin-responsive regulator of P-bodies.

TNRC6B TNRC6C TNRC6A

1.88e-048048335803934
Pubmed

Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.

GATA4 RCOR1 MIDEAS

2.10e-048348328794006
Pubmed

A census of human transcription factors: function, expression and evolution.

GATA4 NR1H3 DLX1 RCOR1 PBX1 MIDEAS NFIX

2.34e-0490848719274049
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

ZBTB10 TNRC6B RCOR1 MYCBP2 TNRC6A

2.74e-0441848534709266
Pubmed

m6A regulation of cortical and retinal neurogenesis is mediated by the redundant m6A readers YTHDFs.

YTHDF1 YTHDF3

3.14e-041948236039295
Pubmed

The m6A reader YTHDF2 is a negative regulator for dendrite development and maintenance of retinal ganglion cells.

YTHDF1 YTHDF3

5.05e-042448235179492
Pubmed

The Maternal Microbiome Programs the m6A Epitranscriptome of the Mouse Fetal Brain and Intestine.

YTHDF1 YTHDF3

5.48e-042548235874829
Pubmed

Loss of Gsx1 and Gsx2 function rescues distinct phenotypes in Dlx1/2 mutants.

DLX1 PBX1

5.48e-042548223042297
Pubmed

Conditional mutagenesis of Gata6 in SF1-positive cells causes gonadal-like differentiation in the adrenal cortex of mice.

GATA4 PBX1

6.40e-042748223471215
Pubmed

Abnormal neocortex arealization and Sotos-like syndrome-associated behavior in Setd2 mutant mice.

PCDHGA7 PCDHGA3

6.89e-042848233523829
Pubmed

Cul3-KLHL20 E3 ubiquitin ligase plays a key role in the arms race between HIV-1 Nef and host SERINC5 restriction.

MYCBP2 WWP1

6.89e-042848235474067
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

GATA4 ZBTB10 TNRC6B RCOR1 SENP1 WWP1 TNRC6A

8.02e-04111648731753913
Pubmed

A protein-protein interaction map of the TNF-induced NF-κB signal transduction pathway.

YTHDF1 TNRC6B YTHDF3 TNRC6A

8.03e-0430248430561431
Pubmed

Global mapping of herpesvirus-host protein complexes reveals a transcription strategy for late genes.

YTHDF1 RBM5 MYCBP2 WWP1 YTHDF3

8.25e-0453348525544563
Pubmed

Corticothalamic Projection Neuron Development beyond Subtype Specification: Fog2 and Intersectional Controls Regulate Intraclass Neuronal Diversity.

GATA4 MYCBP2

8.45e-043148227321927
Pubmed

A genome-wide association study provides evidence for association of chromosome 8p23 (MYP10) and 10q21.1 (MYP15) with high myopia in the French Population.

GATA4 SPATA22

9.01e-043248223049088
Pubmed

Mettl14-mediated m6A modification ensures the cell-cycle progression of late-born retinal progenitor cells.

YTHDF1 YTHDF3

1.08e-033548237269288
Pubmed

Human ISG15 conjugation targets both IFN-induced and constitutively expressed proteins functioning in diverse cellular pathways.

SENP1 NFIX YTHDF3

1.23e-0315248316009940
Pubmed

ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2.

ZBTB10 TNRC6A

1.27e-033848230629181
Pubmed

Transcriptional network orchestrating regional patterning of cortical progenitors.

PBX1 NFIX

1.34e-033948234921112
InteractionPCDHGA4 interactions

PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3

3.68e-1734469int:PCDHGA4
InteractionPCDHGA9 interactions

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA9 PCDHGA8 PCDHGA5 PCDHGA4 PCDHGA3

5.16e-1533468int:PCDHGA9
InteractionPCDHGA12 interactions

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA9 PCDHGA7 PCDHGA4

2.10e-1410466int:PCDHGA12
InteractionPCDHGA7 interactions

PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA7 PCDHGA6 PCDHGA5 PCDHGA4

9.33e-1425467int:PCDHGA7
InteractionH2BC5 interactions

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

3.13e-133314613int:H2BC5
InteractionPCDHA9 interactions

PCDHGB2 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA6 PCDHGA4

8.73e-1132466int:PCDHA9
InteractionPCDHGA8 interactions

PCDHGA9 PCDHGA8 PCDHGA5 PCDHGA4

1.19e-105464int:PCDHGA8
InteractionPCDHGB2 interactions

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA6

6.67e-1044466int:PCDHGB2
InteractionPCDHGA6 interactions

PCDHGB2 PCDHGA7 PCDHGA6 PCDHGA5 PCDHGA4

2.04e-0924465int:PCDHGA6
InteractionPCDHGA5 interactions

PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4

6.21e-0963466int:PCDHGA5
InteractionPCDHGB1 interactions

FGFRL1 PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA9 PCDHGA7

2.12e-0877466int:PCDHGB1
InteractionPCDHGA10 interactions

PCDHGB2 PCDHGA10 PCDHGA7 PCDHGA4

8.98e-0819464int:PCDHGA10
InteractionANKRD17 interactions

YTHDF1 TNRC6B FGFRL1 RCOR1 TNRC6C YTHDF3 TNRC6A

7.50e-07226467int:ANKRD17
InteractionPCDHGA3 interactions

PCDHGA9 PCDHGA4 PCDHGA3

9.26e-079463int:PCDHGA3
InteractionLTBP1 interactions

PCDHGB2 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGA5

2.10e-0692465int:LTBP1
InteractionCNOT11 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

5.54e-06112465int:CNOT11
InteractionPCDHGC3 interactions

PCDHGB2 PCDHGB1 PCDHGA6 PCDHGA4

6.91e-0654464int:PCDHGC3
InteractionMARF1 interactions

YTHDF1 RBM5 TNRC6B YTHDF3 TNRC6A

1.06e-05128465int:MARF1
InteractionDCHS1 interactions

PCDHGB1 PCDHGA7 PCDHGA6

1.23e-0520463int:DCHS1
InteractionPAN3 interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

1.45e-0565464int:PAN3
InteractionCNOT7 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.64e-05140465int:CNOT7
InteractionCNOT10 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.70e-05141465int:CNOT10
InteractionCPEB1 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.01e-05146465int:CPEB1
InteractionFAM193A interactions

TNRC6B RCOR1 YTHDF3 TNRC6A

2.06e-0571464int:FAM193A
InteractionB9D2 interactions

YTHDF1 TNRC6B RCOR1 YTHDF3

2.30e-0573464int:B9D2
InteractionCNOT8 interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

2.43e-0574464int:CNOT8
InteractionHELZ interactions

YTHDF1 CELA1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.48e-05257466int:HELZ
InteractionAGO3 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.52e-05153465int:AGO3
InteractionCPEB4 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.77e-05156465int:CPEB4
InteractionKIZ interactions

TNRC6B TNRC6C TNRC6A

3.13e-0527463int:KIZ
InteractionDCP1A interactions

TNRC6B RCOR1 TNRC6C YTHDF3 TNRC6A

3.72e-05166465int:DCP1A
InteractionTNRC6A interactions

ZBTB10 YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

4.00e-05280466int:TNRC6A
InteractionCEP85 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

4.06e-05169465int:CEP85
InteractionSCLT1 interactions

YTHDF1 TNRC6B RCOR1 TNRC6C TNRC6A

4.06e-05169465int:SCLT1
InteractionTNRC6B interactions

YTHDF1 TNRC6B RCOR1 TNRC6C YTHDF3 TNRC6A

4.17e-05282466int:TNRC6B
InteractionCELF1 interactions

YTHDF1 RBM5 TNRC6B TNRC6C YTHDF3 TNRC6A

4.68e-05288466int:CELF1
InteractionCNOT2 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

5.19e-05178465int:CNOT2
InteractionFUBP3 interactions

ZBTB10 YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

5.56e-05297466int:FUBP3
InteractionZFP36 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

5.62e-05181465int:ZFP36
InteractionUBAP2L interactions

ZBTB10 YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

5.66e-05298466int:UBAP2L
InteractionAGO1 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

5.92e-05183465int:AGO1
InteractionCNOT6L interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

5.98e-0593464int:CNOT6L
InteractionFAM120C interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

7.26e-05191465int:FAM120C
InteractionGLI3 interactions

YTHDF1 CELA1 TNRC6B TNRC6A

7.34e-0598464int:GLI3
InteractionPCDHGB7 interactions

PCDHGB2 PCDHGA4

7.60e-056462int:PCDHGB7
InteractionSMG7 interactions

YTHDF1 RBM5 TNRC6B TNRC6C YTHDF3 TNRC6A

8.25e-05319466int:SMG7
InteractionCNOT3 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.06e-04207465int:CNOT3
InteractionANKHD1-EIF4EBP3 interactions

YTHDF1 TNRC6B FGFRL1 TNRC6A

1.07e-04108464int:ANKHD1-EIF4EBP3
InteractionZC3H7A interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.27e-04215465int:ZC3H7A
InteractionPCDHGB3 interactions

PCDHGB2 PCDHGB1

1.41e-048462int:PCDHGB3
InteractionMEX3B interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.47e-04222465int:MEX3B
InteractionHDAC1 interactions

GATA4 TNRC6B RCOR1 SENP1 PBX1 USP38 MIDEAS MYCBP2 NFIX TNRC6A

1.61e-0411084610int:HDAC1
InteractionCNOT9 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

1.77e-04231465int:CNOT9
InteractionPAX7 interactions

RCOR1 MIDEAS NFIX ZNF746

1.82e-04124464int:PAX7
InteractionRPL23 interactions

PCDHGB1 PCDHGA9 PCDHGA7 PCDHGA6 PCDHGA5 PCDHGA4 ZNF746

2.06e-04540467int:RPL23
InteractionITFG1 interactions

RCOR1 PCDHGB2 PCDHGB1 PCDHGA6 PCDHGA5 PCDHGA4 YTHDF3

2.06e-04540467int:ITFG1
InteractionR3HDM2 interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

2.12e-04129464int:R3HDM2
InteractionKDM1A interactions

GATA4 ZBTB10 TNRC6B NR1H3 RCOR1 SPATA22 USP38 MYCBP2 TNRC6A

2.35e-04941469int:KDM1A
InteractionYTHDF3 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.37e-04246465int:YTHDF3
InteractionPRRC2A interactions

YTHDF1 CELA1 TNRC6B TNRC6C YTHDF3 TNRC6A

2.43e-04389466int:PRRC2A
InteractionDAG1 interactions

PCDHGA9 PCDHGA5 PCDHGA4 WWP1

2.46e-04134464int:DAG1
InteractionTEX19 interactions

ZBTB10 RCOR1 ZNF746

2.54e-0454463int:TEX19
InteractionTNRC6C interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

2.75e-04138464int:TNRC6C
InteractionRBPJ interactions

GATA4 ZBTB10 RCOR1 PBX1 NFIX

2.75e-04254465int:RBPJ
InteractionPCDHB2 interactions

PCDHGB2 PCDHGB1

2.77e-0411462int:PCDHB2
InteractionCNOT6 interactions

TNRC6B TNRC6C TNRC6A

2.83e-0456463int:CNOT6
InteractionLSM14A interactions

ZBTB10 YTHDF1 TNRC6B MYCBP2 YTHDF3

3.06e-04260465int:LSM14A
InteractionDAZL interactions

YTHDF1 TNRC6B YTHDF3 TNRC6A

3.32e-04145464int:DAZL
InteractionEPHB4 interactions

PARD6A PCDHGA7 PCDHGA6 PCDHGA5

3.41e-04146464int:EPHB4
InteractionITSN2 interactions

YTHDF1 TNRC6B TNRC6C TNRC6A

3.49e-04147464int:ITSN2
InteractionCEP135 interactions

YTHDF1 TNRC6B RCOR1 TNRC6C TNRC6A

3.76e-04272465int:CEP135
InteractionTBX5 interactions

GATA4 RCOR1 SENP1 PBX1

3.77e-04150464int:TBX5
InteractionPCDH10 interactions

MYCBP2 PCDHGB2 PCDHGB1

3.83e-0462463int:PCDH10
InteractionCNOT4 interactions

TNRC6B YTHDF3 TNRC6A

4.40e-0465463int:CNOT4
InteractionCBX6 interactions

PCDHGB2 PCDHGA9 PCDHGA6 PCDHGA5 PCDHGA4

4.51e-04283465int:CBX6
InteractionIQCC interactions

TNRC6B TNRC6C

4.56e-0414462int:IQCC
InteractionPUM1 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

4.81e-04287465int:PUM1
InteractionNME7 interactions

TNRC6B TNRC6C WWP1 TNRC6A

4.82e-04160464int:NME7
InteractionARRDC1 interactions

FGFRL1 RCOR1 WWP1

5.03e-0468463int:ARRDC1
InteractionGCM1 interactions

YTHDF1 SENP1 MIDEAS

5.03e-0468463int:GCM1
InteractionGARRE1 interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

5.66e-04167464int:GARRE1
InteractionAP2A1 interactions

GATA4 TNRC6B TNRC6C ZNF746 TNRC6A

5.79e-04299465int:AP2A1
InteractionEIF4ENIF1 interactions

YTHDF1 TNRC6B RCOR1 YTHDF3 TNRC6A

5.88e-04300465int:EIF4ENIF1
InteractionFAM184A interactions

TNRC6B TNRC6C TNRC6A

5.94e-0472463int:FAM184A
InteractionPCCB interactions

GATA4 RCOR1 NFIX ZNF746

6.05e-04170464int:PCCB
InteractionSP7 interactions

DLX1 RCOR1 PBX1 MIDEAS NFIX

6.24e-04304465int:SP7
InteractionCNOT1 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

6.34e-04305465int:CNOT1
InteractionGPBP1 interactions

TNRC6B TNRC6C TNRC6A

6.70e-0475463int:GPBP1
InteractionAGO2 interactions

ZBTB10 YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

6.77e-04472466int:AGO2
InteractionAMOT interactions

GATA4 TNRC6B RCOR1 WWP1 TNRC6A

7.02e-04312465int:AMOT
InteractionYTHDF2 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3 TNRC6A

7.02e-04312465int:YTHDF2
InteractionPATL1 interactions

YTHDF1 TNRC6B YTHDF3 TNRC6A

7.04e-04177464int:PATL1
InteractionGIGYF1 interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

7.04e-04177464int:GIGYF1
InteractionDUXB interactions

MIDEAS YTHDF3

7.62e-0418462int:DUXB
InteractionALG13 interactions

YTHDF1 TNRC6B YTHDF3 TNRC6A

7.97e-04183464int:ALG13
InteractionDZIP3 interactions

YTHDF1 RCOR1 YTHDF3 TNRC6A

7.97e-04183464int:DZIP3
InteractionTBKBP1 interactions

TNRC6B TNRC6C TNRC6A

8.09e-0480463int:TBKBP1
InteractionSMAP2 interactions

YTHDF1 TNRC6B TNRC6C YTHDF3

8.99e-04189464int:SMAP2
InteractionSTIL interactions

TNRC6B TNRC6C YTHDF3 TNRC6A

9.17e-04190464int:STIL
InteractionSMG5 interactions

TNRC6B YTHDF3 TNRC6A

9.32e-0484463int:SMG5
Cytoband5q31

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

1.36e-2311548135q31
CytobandEnsembl 112 genes in cytogenetic band chr5q31

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

4.40e-182984813chr5q31
GeneFamilyClustered protocadherins

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

4.18e-2364401320
GeneFamilyAtaxins|Trinucleotide repeat containing

TNRC6B TNRC6C TNRC6A

2.23e-0525403775
GeneFamilyGATA zinc finger domain containing|Myb/SANT domain containing

RCOR1 MIDEAS

6.12e-0353402532
CoexpressionAtlasPP_RBC_top-relative-expression-ranked_2500_k-means-cluster#3

PCDHGB2 PCDHGA6 PCDHGA3 NFIX PCDHGA2

2.06e-05158455PP_RBC_2500_K3
CoexpressionAtlasgeo_heart_top-relative-expression-ranked_1000_k-means-cluster#5

GATA4 PCDHGA12 PCDHGA7 PCDHGA6 PCDHGA3 NFIX PCDHGA2

2.84e-05424457geo_heart_1000_K5
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Differentiated-like-AC-like-AC-like-C|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA2 PCDHGA1

4.59e-08184486629cfed10e1112cf30f6a828ce9efbbc6b207789
ToppCellTCGA-Thymus-Primary_Tumor-Thymoma-Type_AB-3|TCGA-Thymus / Sample_Type by Project: Shred V9

PCDHGB2 PCDHGA6 PCDHGA5 PCDHGA4

4.66e-0610348491fe062dcadd12fdb04fa4593a794c57f3f0411d
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_B-B_cell-B_c03-CD27-AIM2|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)

ADORA2A-AS1 PBX1 PARD6A PCDHGA10

1.66e-05142484199a0a1024b6cc446f5ca1f277846a2bdb227a9f
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Gad1Gad2.Sgol2a_(Very_small_cluster)--|Striatum / BrainAtlas - Mouse McCarroll V32

YTHDF1 MIDEAS PCDHGA7 PCDHGA6

3.29e-051694845375eb52ebadccb7bfff997a11985f23e81014d6
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Gad1Gad2.Sgol2a_(Very_small_cluster)|Striatum / BrainAtlas - Mouse McCarroll V32

YTHDF1 MIDEAS PCDHGA7 PCDHGA6

3.29e-05169484c3bf0cb67f200d02d5a021754e9b2a68d23ea168
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Gad1Gad2.Sgol2a_(Very_small_cluster)-|Striatum / BrainAtlas - Mouse McCarroll V32

YTHDF1 MIDEAS PCDHGA7 PCDHGA6

3.29e-051694841c132d21255f5a5174ac38db4e91927f9093418e
ToppCell11.5-Distal-Mesenchymal-Mesenchyme_SERPINF1-high|Distal / Age, Tissue, Lineage and Cell class

GATA4 LRRN4 PCDHGA8 CRB2

3.60e-051734846989c9cebcd81eccceac7e5a86152676ee959386
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia/MHC-C|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PCDHGB2 PCDHGA9 PCDHGA7 PCDHGA4

4.11e-05179484be1e09145e24cd40ba51aae1fcd868b4c1e2b4c1
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-NPC-like-NPC-like_OPC-B|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PCDHGB2 PCDHGA10 PCDHGA7 PCDHGA8

4.39e-05182484f7b28744d9c330b6004763aa8aa8605ba41fd1fa
ToppCellSmart-start-Cell-Wel_seq-Neoplastic-Stem-like-OPC-like-OPC-like-C|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PCDHGB2 PCDHGA10 PCDHGA9 PCDHGA4

4.77e-0518648410edc3dd96181b6f7bd07a5ad0862ba9fa6a9cb9
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibro-meso-mesothelial_cell-Mesothelium-Mesothelium_L.2.6.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

GATA4 LRRN4 PCDHGB1 CRB2

4.98e-05188484e2bee29865805d4db30b090d4bce9a1f5311cf51
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

DLX1 BRS3 PCDHGB1 NFIX

5.08e-051894848e6b6025f5554672e26a5d19fe365acb4333789c
ToppCellFibroblast-C|World / shred on cell class and cell subclass (v4)

LRRN4 PBX1 ARSI NFIX

5.08e-0518948458e0400fbab5a0755504275aef5cf7986149abab
ToppCellBronchial-10x5prime-Stromal-Mesofibroblastic-Mesothelia|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

GATA4 LRRN4 PCDHGB2 CRB2

5.97e-0519748426888af95a7cc082a1f1218af35b1f07cb9436ed
ToppCellBronchial-10x5prime-Stromal-Mesofibroblastic|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

GATA4 LRRN4 PCDHGB2 CRB2

5.97e-05197484438de7f0d35d81d5f5e41dcef7b2c54b6da03df4
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M|organoid_Kanton_Nature / Sample Type, Dataset, Time_group, and Cell type.

DLX1 MYCBP2 PCDHGA8 NFIX

6.20e-05199484b2d7dea11207cca63d688f8051143850b29dbdf0
ToppCellSubstantia_nigra-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cspg5_(Cspg5)|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

PCDHGA7 PCDHGA3 PCDHGA1

1.25e-04904833817a5b0235e632d976ea565175bdbebbd959bf0
ToppCellSubstantia_nigra-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cspg5_(Cspg5)-|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

PCDHGA7 PCDHGA3 PCDHGA1

1.25e-0490483a528f5dcee1a356dea89ff2588d2e0f276f2d5fc
Drugmontmorillonite

PCDHGA12 PCDHGA10 PCDHGA8 ARSI PCDHGA3 PCDHGA2

2.31e-1040486CID000517273
DrugCID9959010

PCDHGA12 PCDHGA10 PCDHGA8 PCDHGA3 PCDHGA2

1.83e-0839485CID009959010
DrugAC1L1UVI

PCDHGA12 PCDHGA10 PCDHGA8 PCDHGA3 PCDHGA2

1.08e-0755485CID000061263
Druglactofen

PCDHGA12 PCDHGA10 PCDHGA8 PCDHGA3 PCDHGA2

7.64e-0781485CID000062276
Drugsertaconazole

CELA1 PCDHGA12 PCDHGA10 PCDHGA8 PCDHGA3 PCDHGA2

6.65e-06220486CID000065863
DrugAC1NFC6P

PCDHGA12 PCDHGA10 PCDHGA8 PCDHGA3 PCDHGA2

1.48e-05148485CID000004587
DrugA25618

GATA4 RCOR1 PBX1 MUC4 PCDHGA12 PCDHGA10 PCDHGA8 PCDHGA3 PCDHGA2

3.04e-05777489CID000005562
Drugss,ss-carotene

PCDHGA12 PCDHGA10 PCDHGA8 PCDHGA3 PCDHGA2

6.42e-05201485CID000000573
Diseasemental development measurement

PCDHGB2 PCDHGB1 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

2.95e-28254712EFO_0008230
Diseasechildhood trauma measurement, alcohol consumption measurement

PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

3.73e-24714713EFO_0007878, EFO_0007979
DiseaseSarcosine measurement

PCDHGB2 PCDHGB1 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

4.24e-23234710EFO_0021668
Diseasemean platelet volume

GATA4 ZBTB10 CELA1 RCOR1 PBX1 PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1 TNRC6A

4.07e-1610204719EFO_0004584
Diseaselymphocyte count

TNRC6B PBX1 PCDHGB2 PCDHGB1 PCDHGA12 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA8 PCDHGA6 PCDHGA5 PCDHGA4 PCDHGA3 NFIX PCDHGA2 PCDHGA1

4.34e-1014644716EFO_0004587
DiseaseAlzheimer disease, polygenic risk score

PCDHGB2 PCDHGB1 PCDHGA5 PCDHGA4 PCDHGA3 PCDHGA2 PCDHGA1

3.71e-05586477EFO_0030082, MONDO_0004975
DiseaseCongenital hernia of foramen of Morgagni

GATA4 FGFRL1

4.17e-0419472C0265699
DiseaseCongenital hernia of foramen of Bochdalek

GATA4 FGFRL1

4.17e-0419472C0265700
Diseasedisease of metabolism (implicated_via_orthology)

YTHDF1 YTHDF3

5.12e-0421472DOID:0014667 (implicated_via_orthology)
DiseaseCongenital diaphragmatic hernia

GATA4 FGFRL1

5.12e-0421472C0235833
Diseasecortical thickness

TNRC6B FGFRL1 MYCBP2 NFIX CRB2 ESPNL TNRC6A

1.79e-031113477EFO_0004840
Diseasecognitive function measurement, self reported educational attainment

RBM5 MYCBP2 NFIX TNRC6A

2.44e-03355474EFO_0004784, EFO_0008354
Diseasecarotid artery intima media thickness

GATA4 SPATA22 SNX29 PCDHGA1

5.67e-03450474EFO_0007117
Diseasereticulocyte count

PIKFYVE TNRC6B FGFRL1 RCOR1 SENP1 MIDEAS

6.05e-031045476EFO_0007986
Diseasereticulocyte measurement

PIKFYVE TNRC6B FGFRL1 RCOR1 SENP1 MIDEAS

6.27e-031053476EFO_0010700
Diseasepreeclampsia

ADORA2A-AS1 MYCBP2

6.90e-0378472EFO_0000668
DiseaseAlzheimer disease, educational attainment

RBM5 NFIX SNX29

7.16e-03247473EFO_0011015, MONDO_0004975
Diseasethyroxine measurement

ADORA2A-AS1 SNX29

7.78e-0383472EFO_0005130

Protein segments in the cluster

PeptideGeneStartEntry
QANGSWSGSQPECGV

CSMD2

2876

Q7Z408
SDNGGQTFSGGSNWP

ARSI

296

Q5FYB1
FPSNSNAVGTSSGWN

ADORA2A-AS1

41

P86434
WNPNSSSGKGSGGNA

DLX1

216

P56177
AAPNGNSSSNSWEEG

RCOR1

76

Q9UKL0
TSGSQNGDDTGTWPN

PCDHGA7

826

Q9Y5G6
TSGSQNGDDTGTWPN

PCDHGA2

826

Q9Y5H1
QDTDGSWTQPSTDGS

ITPKC

271

Q96DU7
SGSQNGDDTGTWPNN

PCDHGA5

826

Q9Y5G8
TSGSQNGDDTGTWPN

PCDHGA8

826

Q9Y5G5
TSGSQNGDDTGTWPN

PCDHGA12

826

O60330
WKPGAQDASSQAQGG

NR1H3

21

Q13133
TSGSQNGDDTGTWPN

PCDHGA4

856

Q9Y5G9
AGAQTQWTQETGTTG

MUC4

561

Q99102
PQGISANGGWQDATT

PBX1

396

P40424
QDNGGSSGPTEQAAW

ESPNL

471

Q6ZVH7
TSGSQNGDDTGTWPN

PCDHGA6

826

Q9Y5G7
SSQSSGWPNDVDAGP

NFIX

306

Q14938
NSSQPSELGGRQSWN

CRB2

786

Q5IJ48
SSSGGQEDPASQQWA

FGFRL1

131

Q8N441
TSGSQNGDDTGTWPN

PCDHGA9

826

Q9Y5G4
SGSQNGDDTGTWPNN

PCDHGA10

831

Q9Y5H3
TSGSQNGDDTGTWPN

PCDHGB1

821

Q9Y5G3
SGSQNGDDTGTWPNN

PCDHGB2

826

Q9Y5G2
GGTEAGRNSWPSQIS

CELA1

21

Q9UNI1
AQWSSTQSQSGEGGS

RBM5

341

P52756
TSGSQNGDDTGTWPN

PCDHGA3

826

Q9Y5H0
PSLDDQEQASSGWGS

PARD6A

321

Q9NPB6
EGGQGEQQPLSGSWT

PIKFYVE

61

Q9Y2I7
GTQQGSPGWSQAGAD

GATA4

81

P43694
AASNIWEESSQAPGG

CEFIP

1071

Q711Q0
GGGGGVSDSSWQQQP

MIDEAS

111

Q6PJG2
TQQGPWGSSGSNATD

LRRN4

31

Q8WUT4
SGSQNGDDTGTWPNN

PCDHGA1

826

Q9Y5H4
NDTTRSGNSGWGNST

TNRC6C

631

Q9HCJ0
FGPNSNGSQSSNSWK

SNX29

311

Q8TEQ0
NSIQSNTGRSQGGWS

SPATA22

96

Q8NHS9
GQSANGQWRNSTPSS

SENP1

91

Q9P0U3
TSQGRSWNTGNGSPD

MYCBP2

1731

O75592
PAWGTESTTVNGNDQ

MRGPRX2

6

Q96LB1
NTNKGWSGDNSPGIE

BRS3

31

P32247
WGTSGSQGQSTQSSA

YTHDF3

136

Q7Z739
STNGLSGNNPTSGLW

USP38

951

Q8NB14
STNNNAGGEASAWPP

ZBTB10

26

Q96DT7
PSPAQEGAWESQGSS

ZNF746

321

Q6NUN9
QQSGNANTETLPSGW

WWP1

341

Q9H0M0
SGAANSQSTSWGSGN

TNRC6A

576

Q8NDV7
SQSTSWGSGNGANSG

TNRC6A

581

Q8NDV7
NSTWGSGASSNNGTS

TNRC6B

166

Q9UPQ9
SGPNQPNSSTGAWDN

TNRC6B

526

Q9UPQ9
KNSGGWGDAPSQSNQ

TNRC6B

661

Q9UPQ9
NPAFSAWGTSGSQGQ

YTHDF1

126

Q9BYJ9
AWGTSGSQGQQTQSS

YTHDF1

131

Q9BYJ9