Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	G-rich strand telomeric DNA binding	HNRNPA1L2 RPA2 HNRNPA2B1	2.71e-06	11	52	3	GO:0098505
GeneOntologyMolecularFunction	single-stranded telomeric DNA binding	HNRNPA1L2 RPA2 HNRNPA2B1	4.68e-06	13	52	3	GO:0043047
GeneOntologyMolecularFunction	sequence-specific single stranded DNA binding	HNRNPA1L2 RPA2 HNRNPA2B1	7.41e-06	15	52	3	GO:0098847
GeneOntologyMolecularFunction	mRNA binding	TARDBP PABPC3 EIF4G2 HNRNPM HNRNPA1L2 HNRNPA1L3 PABPC1 HNRNPA2B1 MYEF2	6.78e-05	694	52	9	GO:0003729
GeneOntologyMolecularFunction	mRNA 3'-UTR binding	TARDBP PABPC3 HNRNPA1L2 HNRNPA1L3 PABPC1 HNRNPA2B1	7.89e-05	276	52	6	GO:0003730
GeneOntologyMolecularFunction	telomeric DNA binding	HNRNPA1L2 RPA2 HNRNPA2B1	1.54e-04	40	52	3	GO:0042162
GeneOntologyMolecularFunction	single-stranded DNA binding	HNRNPA1L2 SSBP4 RPA2 HNRNPA2B1	4.09e-04	134	52	4	GO:0003697
GeneOntologyMolecularFunction	Hsp70 protein binding	DNAJB1 DNAJA4 DNAJA1	5.92e-04	63	52	3	GO:0030544
GeneOntologyMolecularFunction	pre-mRNA intronic binding	TARDBP HNRNPA2B1	5.93e-04	14	52	2	GO:0097157
GeneOntologyMolecularFunction	pre-mRNA binding	TARDBP HNRNPA1L2 HNRNPA2B1	6.20e-04	64	52	3	GO:0036002
GeneOntologyMolecularFunction	histone methyltransferase binding	NCOA6 WIZ	9.91e-04	18	52	2	GO:1990226
GeneOntologyMolecularFunction	poly(A) binding	PABPC3 PABPC1	2.58e-03	29	52	2	GO:0008143
GeneOntologyMolecularFunction	lysine-acetylated histone binding	YEATS4 TAF1	2.76e-03	30	52	2	GO:0070577
GeneOntologyMolecularFunction	acetylation-dependent protein binding	YEATS4 TAF1	2.95e-03	31	52	2	GO:0140033
GeneOntologyMolecularFunction	single-stranded RNA binding	PABPC3 HNRNPA1L2 PABPC1	3.03e-03	111	52	3	GO:0003727
GeneOntologyMolecularFunction	ATPase activator activity	DNAJB1 DNAJA1	3.14e-03	32	52	2	GO:0001671
GeneOntologyMolecularFunction	poly(U) RNA binding	PABPC3 PABPC1	3.54e-03	34	52	2	GO:0008266
GeneOntologyMolecularFunction	transcription regulator inhibitor activity	DNAJB1 TAF1	3.96e-03	36	52	2	GO:0140416
GeneOntologyMolecularFunction	poly-purine tract binding	PABPC3 PABPC1	4.18e-03	37	52	2	GO:0070717
GeneOntologyMolecularFunction	unfolded protein binding	DNAJB1 DNAJA4 DNAJA1	4.33e-03	126	52	3	GO:0051082
GeneOntologyMolecularFunction	poly-pyrimidine tract binding	PABPC3 PABPC1	4.63e-03	39	52	2	GO:0008187
GeneOntologyMolecularFunction	molecular condensate scaffold activity	TARDBP HNRNPA2B1	5.36e-03	42	52	2	GO:0140693
GeneOntologyBiologicalProcess	positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	PABPC3 TNRC6B PABPC1	5.39e-06	14	52	3	GO:0060213
GeneOntologyBiologicalProcess	positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	PABPC3 TNRC6B PABPC1	8.27e-06	16	52	3	GO:1900153
GeneOntologyBiologicalProcess	regulation of nuclear-transcribed mRNA poly(A) tail shortening	PABPC3 TNRC6B PABPC1	8.27e-06	16	52	3	GO:0060211
GeneOntologyBiologicalProcess	mRNA processing	TARDBP SAFB PABPC3 HNRNPM HNRNPA1L2 HNRNPA1L3 PABPC1 HNRNPA2B1 AKAP8L	8.58e-06	551	52	9	GO:0006397
GeneOntologyBiologicalProcess	mRNA metabolic process	TARDBP SAFB PABPC3 HNRNPM TNRC6B HNRNPA1L2 TAF1 HNRNPA1L3 PABPC1 HNRNPA2B1 AKAP8L	1.43e-05	917	52	11	GO:0016071
GeneOntologyBiologicalProcess	RNA splicing	TARDBP PABPC3 HNRNPM HNRNPA1L2 HNRNPA1L3 PABPC1 HNRNPA2B1 AKAP8L	3.42e-05	502	52	8	GO:0008380
GeneOntologyBiologicalProcess	regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	PABPC3 TNRC6B PABPC1	4.24e-05	27	52	3	GO:1900151
GeneOntologyBiologicalProcess	nuclear-transcribed mRNA poly(A) tail shortening	PABPC3 TNRC6B PABPC1	7.82e-05	33	52	3	GO:0000289
GeneOntologyBiologicalProcess	response to temperature stimulus	DNAJB1 ATR DNAJA4 GMPR DNAJA1	1.76e-04	208	52	5	GO:0009266
GeneOntologyBiologicalProcess	nuclear membrane organization	TARDBP ATR AKAP8L	2.41e-04	48	52	3	GO:0071763
GeneOntologyBiologicalProcess	response to heat	DNAJB1 ATR DNAJA4 DNAJA1	2.45e-04	121	52	4	GO:0009408
GeneOntologyBiologicalProcess	negative regulation of inclusion body assembly	DNAJB1 DNAJA4	4.05e-04	12	52	2	GO:0090084
GeneOntologyBiologicalProcess	nuclear membrane disassembly	ATR AKAP8L	4.78e-04	13	52	2	GO:0051081
GeneOntologyBiologicalProcess	nuclear envelope organization	TARDBP ATR AKAP8L	5.39e-04	63	52	3	GO:0006998
GeneOntologyBiologicalProcess	regulation of mRNA 3'-end processing	PABPC3 PABPC1	5.56e-04	14	52	2	GO:0031440
GeneOntologyBiologicalProcess	membrane disassembly	ATR AKAP8L	5.56e-04	14	52	2	GO:0030397
GeneOntologyBiologicalProcess	nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	PABPC3 TNRC6B PABPC1	5.91e-04	65	52	3	GO:0000288
GeneOntologyBiologicalProcess	regulation of mRNA processing	SAFB PABPC3 PABPC1 HNRNPA2B1	6.74e-04	158	52	4	GO:0050684
GeneOntologyBiologicalProcess	regulation of cellular response to heat	DNAJB1 ATR	7.31e-04	16	52	2	GO:1900034
GeneOntologyCellularComponent	catalytic step 2 spliceosome	PABPC3 HNRNPM HNRNPA1L2 HNRNPA1L3 PABPC1 HNRNPA2B1	1.64e-07	97	53	6	GO:0071013
GeneOntologyCellularComponent	spliceosomal complex	PABPC3 HNRNPM HNRNPA1L2 HNRNPA1L3 PABPC1 HNRNPA2B1	1.69e-05	215	53	6	GO:0005681
GeneOntologyCellularComponent	mCRD-mediated mRNA stability complex	PABPC3 PABPC1	9.40e-05	6	53	2	GO:0106002
GeneOntologyCellularComponent	nuclear protein-containing complex	NCOA6 ATR PABPC3 HNRNPM HNRNPA1L2 TAF1 POLD3 BCL9 RPA2 HNRNPA1L3 PABPC1 HNRNPA2B1	1.36e-04	1377	53	12	GO:0140513
GeneOntologyCellularComponent	nuclear matrix	YEATS4 HNRNPM HNRNPA2B1 AKAP8L	4.37e-04	140	53	4	GO:0016363
GeneOntologyCellularComponent	cytoplasmic ribonucleoprotein granule	TARDBP PABPC3 TNRC6B PABPC1 HNRNPA2B1	5.89e-04	269	53	5	GO:0036464
GeneOntologyCellularComponent	ribonucleoprotein granule	TARDBP PABPC3 TNRC6B PABPC1 HNRNPA2B1	7.89e-04	287	53	5	GO:0035770
GeneOntologyCellularComponent	nuclear periphery	YEATS4 HNRNPM HNRNPA2B1 AKAP8L	9.26e-04	171	53	4	GO:0034399
GeneOntologyCellularComponent	nuclear replisome	POLD3 RPA2	1.54e-03	23	53	2	GO:0043601
GeneOntologyCellularComponent	replisome	POLD3 RPA2	1.82e-03	25	53	2	GO:0030894
GeneOntologyCellularComponent	cytoplasmic stress granule	TARDBP PABPC3 PABPC1	1.86e-03	96	53	3	GO:0010494
GeneOntologyCellularComponent	pronucleus	TAF1 TET3	2.29e-03	28	53	2	GO:0045120
GeneOntologyCellularComponent	ribonucleoprotein complex	PABPC3 HNRNPM SRP54 HNRNPA1L2 HNRNPA1L3 PABPC1 RPL4 HNRNPA2B1 AKAP8L	2.86e-03	1194	53	9	GO:1990904
MousePheno	conotruncal ridge hypoplasia	ALDH1A2 TBX2	2.39e-05	3	40	2	MP:0010587
Domain	RRM	TARDBP SAFB PABPC3 HNRNPM TNRC6B HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	9.00e-09	230	50	9	PS50102
Domain	-	TARDBP SAFB PABPC3 HNRNPM TNRC6B HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	1.50e-08	244	50	9	3.30.70.330
Domain	Nucleotide-bd_a/b_plait	TARDBP SAFB PABPC3 HNRNPM TNRC6B HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	2.44e-08	258	50	9	IPR012677
Domain	RRM_1	TARDBP SAFB PABPC3 HNRNPM HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	7.43e-08	208	50	8	PF00076
Domain	RRM	TARDBP SAFB PABPC3 HNRNPM HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	1.03e-07	217	50	8	SM00360
Domain	RRM_dom	TARDBP SAFB PABPC3 HNRNPM HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	1.46e-07	227	50	8	IPR000504
Domain	HSP40/DnaJ_pept-bd	DNAJB1 DNAJA4 DNAJA1	1.50e-06	9	50	3	IPR008971
Domain	DnaJ_C	DNAJB1 DNAJA4 DNAJA1	1.50e-06	9	50	3	IPR002939
Domain	DnaJ_C	DNAJB1 DNAJA4 DNAJA1	1.50e-06	9	50	3	PF01556
Domain	HnRNPA1	HNRNPA1L2 HNRNPA2B1	2.10e-05	3	50	2	PF11627
Domain	HnRNPA1	HNRNPA1L2 HNRNPA2B1	2.10e-05	3	50	2	IPR021662
Domain	-	DNAJA4 DNAJA1	4.20e-05	4	50	2	2.10.230.10
Domain	ZF_CR	DNAJA4 DNAJA1	4.20e-05	4	50	2	PS51188
Domain	DnaJ	DNAJA4 DNAJA1	4.20e-05	4	50	2	IPR012724
Domain	DnaJ_CXXCXGXG	DNAJA4 DNAJA1	4.20e-05	4	50	2	PF00684
Domain	DnaJ_domain_CS	DNAJB1 DNAJA4 DNAJA1	5.05e-05	27	50	3	IPR018253
Domain	PABC	PABPC3 PABPC1	6.99e-05	5	50	2	PS51309
Domain	HSP_DnaJ_Cys-rich_dom	DNAJA4 DNAJA1	6.99e-05	5	50	2	IPR001305
Domain	PolyA	PABPC3 PABPC1	6.99e-05	5	50	2	SM00517
Domain	PABP_1234	PABPC3 PABPC1	6.99e-05	5	50	2	IPR006515
Domain	PABP_HYD	PABPC3 PABPC1	6.99e-05	5	50	2	IPR002004
Domain	-	PABPC3 PABPC1	6.99e-05	5	50	2	1.10.1900.10
Domain	PABP	PABPC3 PABPC1	6.99e-05	5	50	2	PF00658
Domain	INT_SG_DDX_CT_C	CT45A10 CT45A7	1.95e-04	8	50	2	PF15300
Domain	INT_SG_DDX_CT_C	CT45A10 CT45A7	1.95e-04	8	50	2	IPR029307
Domain	DnaJ	DNAJB1 DNAJA4 DNAJA1	2.87e-04	48	50	3	PF00226
Domain	DnaJ	DNAJB1 DNAJA4 DNAJA1	3.05e-04	49	50	3	SM00271
Domain	DNAJ_1	DNAJB1 DNAJA4 DNAJA1	3.05e-04	49	50	3	PS00636
Domain	DNAJ_2	DNAJB1 DNAJA4 DNAJA1	3.05e-04	49	50	3	PS50076
Domain	-	DNAJB1 DNAJA4 DNAJA1	3.05e-04	49	50	3	1.10.287.110
Domain	DnaJ_domain	DNAJB1 DNAJA4 DNAJA1	3.43e-04	51	50	3	IPR001623
Domain	RRM_dom_euk	PABPC3 PABPC1	1.71e-03	23	50	2	IPR003954
Domain	RRM_1	PABPC3 PABPC1	1.71e-03	23	50	2	SM00361
Pathway	WP_MRNA_PROCESSING	TARDBP PABPC3 EIF4G2 HNRNPM HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	4.67e-05	451	42	8	MM15946
Pathway	REACTOME_MISMATCH_REPAIR_MMR_DIRECTED_BY_MSH2_MSH3_MUTSBETA	POLD3 RPA2	3.84e-04	10	42	2	MM15185
Pathway	WP_TRANSLATION_FACTORS	PABPC3 EIF4G2 PABPC1	4.64e-04	51	42	3	MM15881
Pathway	WP_ATR_SIGNALING	ATR RPA2	4.69e-04	11	42	2	M39507
Pathway	REACTOME_HSP90_CHAPERONE_CYCLE_FOR_STEROID_HORMONE_RECEPTORS_SHR_IN_THE_PRESENCE_OF_LIGAND	DNAJB1 DNAJA4 DNAJA1	4.91e-04	52	42	3	MM14949
Pathway	KEGG_MEDICUS_REFERENCE_ATR_SIGNALING	ATR RPA2	5.61e-04	12	42	2	M47841
Pathway	REACTOME_HSP90_CHAPERONE_CYCLE_FOR_STEROID_HORMONE_RECEPTORS_SHR_IN_THE_PRESENCE_OF_LIGAND	DNAJB1 DNAJA4 DNAJA1	6.43e-04	57	42	3	M27251
Pathway	REACTOME_PROCESSIVE_SYNTHESIS_ON_THE_LAGGING_STRAND	POLD3 RPA2	8.88e-04	15	42	2	MM15373
Pathway	REACTOME_MISMATCH_REPAIR	POLD3 RPA2	8.88e-04	15	42	2	M27442
Pathway	REACTOME_MISMATCH_REPAIR	POLD3 RPA2	8.88e-04	15	42	2	MM15184
Pathway	REACTOME_PROCESSIVE_SYNTHESIS_ON_THE_LAGGING_STRAND	POLD3 RPA2	8.88e-04	15	42	2	M744
Pathway	REACTOME_HDR_THROUGH_HOMOLOGOUS_RECOMBINATION_HRR	ATR POLD3 RPA2	1.17e-03	70	42	3	M27570
Pathway	REACTOME_PROCESSIVE_SYNTHESIS_ON_THE_C_STRAND_OF_THE_TELOMERE	POLD3 RPA2	1.29e-03	18	42	2	MM14682
Pathway	WP_MECP2_AND_ASSOCIATED_RETT_SYNDROME	TARDBP TAF1 TET3	1.32e-03	73	42	3	M39401
Pathway	REACTOME_PROCESSIVE_SYNTHESIS_ON_THE_C_STRAND_OF_THE_TELOMERE	POLD3 RPA2	1.43e-03	19	42	2	M27029
Pathway	REACTOME_LAGGING_STRAND_SYNTHESIS	POLD3 RPA2	1.59e-03	20	42	2	MM15374
Pathway	REACTOME_LAGGING_STRAND_SYNTHESIS	POLD3 RPA2	1.59e-03	20	42	2	M9461
Pathway	REACTOME_PCNA_DEPENDENT_LONG_PATCH_BASE_EXCISION_REPAIR	POLD3 RPA2	1.76e-03	21	42	2	M27505
Pathway	BIOCARTA_P53HYPOXIA_PATHWAY	DNAJB1 TAF1	1.76e-03	21	42	2	M5202
Pathway	REACTOME_PCNA_DEPENDENT_LONG_PATCH_BASE_EXCISION_REPAIR	POLD3 RPA2	1.76e-03	21	42	2	MM15230
Pathway	REACTOME_REGULATION_OF_HSF1_MEDIATED_HEAT_SHOCK_RESPONSE	DNAJB1 ATR RPA2	1.85e-03	82	42	3	M27250
Pathway	REACTOME_GAP_FILLING_DNA_REPAIR_SYNTHESIS_AND_LIGATION_IN_GG_NER	POLD3 RPA2	1.93e-03	22	42	2	MM15303
Pathway	BIOCARTA_EIF4_PATHWAY	PABPC3 PABPC1	2.11e-03	23	42	2	MM1470
Pathway	WP_DNA_MISMATCH_REPAIR	POLD3 RPA2	2.11e-03	23	42	2	M39668
Pathway	KEGG_MISMATCH_REPAIR	POLD3 RPA2	2.11e-03	23	42	2	M13515
Pathway	REACTOME_DEADENYLATION_OF_MRNA	PABPC3 PABPC1	2.29e-03	24	42	2	MM15090
Pathway	BIOCARTA_EIF4_PATHWAY	EIF4G2 PABPC1	2.29e-03	24	42	2	M4791
Pathway	REACTOME_DNA_STRAND_ELONGATION	POLD3 RPA2	2.29e-03	24	42	2	MM15375
Pathway	REACTOME_RESOLUTION_OF_AP_SITES_VIA_THE_MULTIPLE_NUCLEOTIDE_PATCH_REPLACEMENT_PATHWAY	POLD3 RPA2	2.49e-03	25	42	2	M541
Pathway	REACTOME_GAP_FILLING_DNA_REPAIR_SYNTHESIS_AND_LIGATION_IN_GG_NER	POLD3 RPA2	2.49e-03	25	42	2	M27593
Pathway	REACTOME_REGULATION_OF_TP53_ACTIVITY_THROUGH_PHOSPHORYLATION	ATR TAF1 RPA2	2.57e-03	92	42	3	M27636
Pathway	REACTOME_RESOLUTION_OF_AP_SITES_VIA_THE_MULTIPLE_NUCLEOTIDE_PATCH_REPLACEMENT_PATHWAY	POLD3 RPA2	2.69e-03	26	42	2	MM14481
Pathway	KEGG_MEDICUS_REFERENCE_MISMATCH_REPAIR	POLD3 RPA2	2.69e-03	26	42	2	M47827
Pathway	REACTOME_CELLULAR_RESPONSES_TO_STIMULI	DNAJB1 NCOA6 ATR DNAJA4 TNRC6B DNAJA1 RPA2 RPL4	2.72e-03	828	42	8	M27827
Pathway	REACTOME_MITF_M_DEPENDENT_GENE_EXPRESSION	TNRC6B GMPR TBX2	2.81e-03	95	42	3	M48268
Pathway	REACTOME_NONSENSE_MEDIATED_DECAY_NMD_INDEPENDENT_OF_THE_EXON_JUNCTION_COMPLEX_EJC	PABPC3 PABPC1 RPL4	2.90e-03	96	42	3	MM15705
Pubmed	New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules.	DNAJB1 TARDBP ATR PABPC3 EIF4G2 HNRNPM TNRC6B HNRNPA1L2 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2	2.29e-13	462	54	13	31138677
Pubmed	Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis.	TARDBP SAFB PABPC3 HNRNPM HNRNPA1L2 PABPC1 RPL4 HNRNPA2B1 MYEF2	6.30e-12	172	54	9	26336360
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	DNAJB1 TARDBP ALDH1A2 SAFB WIZ EIF4G2 HNRNPM PPME1 TNRC6B SRP54 LASP1 PABPC1 NEK9 RPL4	1.10e-10	934	54	14	33916271
Pubmed	Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy.	TARDBP SAFB HNRNPM PABPC1 RPL4 HNRNPA2B1 MYEF2	3.83e-10	109	54	7	29511296
Pubmed	C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.	DNAJB1 TARDBP PMPCA PABPC3 HNRNPM TNRC6B HNRNPA1L2 POLD3 DNAJA1 RPA2 PABPC1 NEK9 RPL4 HNRNPA2B1 AKAP8L	4.97e-10	1257	54	15	37317656
Pubmed	ATG5 is required for B cell polarization and presentation of particulate antigens.	DNAJB1 TARDBP SAFB PABPC3 EIF4G2 HNRNPA1L2 LASP1 DNAJA1 RPA2 PABPC1 HNRNPA2B1 MYEF2	6.48e-10	701	54	12	30196744
Pubmed	TERRA transcripts are bound by a complex array of RNA-binding proteins.	PABPC3 HNRNPM HNRNPA1L2 PABPC1 HNRNPA2B1	7.14e-10	28	54	5	20975687
Pubmed	TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.	TARDBP SAFB HNRNPM TNRC6B DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1 KRT73	1.11e-09	430	54	10	38172120
Pubmed	Human transcription factor protein interaction networks.	TARDBP NCOA6 YEATS4 WIZ NKX2-4 PABPC3 TNRC6B LASP1 TAF1 SSBP4 BCL9 DNAJA1 RPA2 PABPC1 AKAP8L	2.85e-09	1429	54	15	35140242
Pubmed	Identification of cancer/testis-antigen genes by massively parallel signature sequencing.	CT45A6 CT45A10 CT45A5 CT45A7	6.99e-09	15	54	4	15905330
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	TARDBP NCOA6 SAFB YEATS4 WIZ ATR EIF4G2 HNRNPM ANKRD11 DNAJA1 RPA2 TET3 RPL4 HNRNPA2B1	7.32e-09	1294	54	14	30804502
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	TARDBP SAFB EIF4G2 HNRNPM SRP54 LASP1 POLD3 DNAJA1 PABPC1 NEK9 RPL4 HNRNPA2B1 AKAP8L MYEF2	1.28e-08	1353	54	14	29467282
Pubmed	Systematic Determination of Human Cyclin Dependent Kinase (CDK)-9 Interactome Identifies Novel Functions in RNA Splicing Mediated by the DEAD Box (DDX)-5/17 RNA Helicases.	TARDBP SAFB EIF4G2 HNRNPM LASP1 PABPC1 RPL4 HNRNPA2B1	1.81e-08	295	54	8	26209609
Pubmed	The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation.	TARDBP WIZ NKX2-4 HNRNPM TAF1 DNAJA1 RPL4 AKAP8L KRT73 TBX2	2.00e-08	583	54	10	29844126
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	TARDBP NCOA6 SAFB WIZ PABPC3 EIF4G2 HNRNPM ANKRD11 HNRNPA1L2 TAF1 PABPC1 HNRNPA2B1	2.01e-08	954	54	12	36373674
Pubmed	In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.	DNAJB1 TARDBP DNAJA4 EIF4G2 HNRNPM TNRC6B SRP54 HNRNPA1L2 DNAJA1 PABPC1 HNRNPA2B1 AKAP8L	2.44e-08	971	54	12	33306668
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	DNAJB1 TARDBP SAFB ATR PMPCA ARPC1A EIF4G2 HNRNPM DNAJA1 RPA2 PABPC1 NEK9 RPL4 HNRNPA2B1	2.46e-08	1425	54	14	30948266
Pubmed	EZH2 interacts with HP1BP3 to epigenetically activate WNT7B that promotes temozolomide resistance in glioblastoma.	DNAJB1 TARDBP MYO7A ARPC1A HNRNPM LASP1 DNAJA1 PABPC1 RPL4 HNRNPA2B1 MYEF2	3.60e-08	803	54	11	36517590
Pubmed	Quantitative analysis of PPT1 interactome in human neuroblastoma cells.	DNAJB1 HNRNPM HNRNPA1L2 DNAJA1 RPA2 PABPC1 HNRNPA2B1	3.69e-08	210	54	7	26217791
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	TARDBP NCOA6 EIF4G2 HNRNPM TNRC6B LASP1 POLD3 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1 AKAP8L	4.29e-08	1247	54	13	27684187
Pubmed	Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.	SAFB EIF4G2 HNRNPM HNRNPA1L2 TAF1 DNAJA1 RPL4 HNRNPA2B1	4.50e-08	332	54	8	32786267
Pubmed	SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.	TARDBP HNRNPM TNRC6B DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2 TBX2	5.95e-08	655	54	10	35819319
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	DNAJB1 NCOA6 SAFB WIZ EIF4G2 PPME1 SRP54 LASP1 BCL9 RPA2 PABPC1 HNRNPA2B1	9.79e-08	1103	54	12	34189442
Pubmed	Heterozygous deletion of chromosome 17p renders prostate cancer vulnerable to inhibition of RNA polymerase II.	TARDBP SAFB HNRNPM DNAJA1 PABPC1 RPL4 HNRNPA2B1	1.03e-07	244	54	7	30349055
Pubmed	Mutual regulation between OGT and XIAP to control colon cancer cell growth and invasion.	ALDH1A2 PMPCA EIF4G2 HNRNPM SRP54 DNAJA1 PABPC1 RPL4 HNRNPA2B1 MYEF2	1.16e-07	704	54	10	32994395
Pubmed	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	TARDBP SAFB HNRNPM HNRNPA1L2 DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2	1.32e-07	714	54	10	28302793
Pubmed	SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.	TARDBP EIF4G2 HNRNPM LASP1 PABPC1 RPL4 HNRNPA2B1	1.50e-07	258	54	7	37794589
Pubmed	Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.	TARDBP SAFB WIZ HNRNPM PABPC1 NEK9 RPL4 HNRNPA2B1 AKAP8L	1.66e-07	551	54	9	34728620
Pubmed	Host factors that interact with the pestivirus N-terminal protease, Npro, are components of the ribonucleoprotein complex.	HNRNPM SRP54 PABPC1 RPL4 HNRNPA2B1	1.75e-07	81	54	5	24965446
Pubmed	NFX1-123 and poly(A) binding proteins synergistically augment activation of telomerase in human papillomavirus type 16 E6-expressing cells.	PABPC3 HNRNPM PABPC1 HNRNPA2B1	1.81e-07	32	54	4	17267499
Pubmed	Ubiquilin 2 modulates ALS/FTD-linked FUS-RNA complex dynamics and stress granule formation.	SAFB EIF4G2 HNRNPM SRP54 DNAJA1 PABPC1 HNRNPA2B1	1.99e-07	269	54	7	30442662
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	TARDBP SAFB PMPCA DNAJA4 PABPC3 HNRNPM HNRNPA1L2 DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L KRT73	2.30e-07	1442	54	13	35575683
Pubmed	Transcription factor protein interactomes reveal genetic determinants in heart disease.	DNAJB1 TARDBP SAFB WIZ HNRNPM DNAJA1 HNRNPA2B1 AKAP8L	2.30e-07	411	54	8	35182466
Pubmed	Cdc37 interacts with the glycine-rich loop of Hsp90 client kinases.	DNAJB1 TARDBP HNRNPM HNRNPA2B1	2.32e-07	34	54	4	16611982
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	DNAJB1 TARDBP SAFB ATR EIF4G2 SRP54 LASP1 TAF1 POLD3 DNAJA1 RPA2	3.73e-07	1014	54	11	32416067
Pubmed	Identification of proximal SUMO-dependent interactors using SUMO-ID.	TARDBP SAFB EIF4G2 HNRNPM TNRC6B SRP54 LASP1 POLD3	4.12e-07	444	54	8	34795231
Pubmed	The RNA recognition motif protein RBM11 is a novel tissue-specific splicing regulator.	PABPC3 HNRNPA1L2 PABPC1	4.21e-07	10	54	3	21984414
Pubmed	A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning.	YEATS4 DNAJA4 ARPC1A EIF4G2 HNRNPM SRP54 POLD3 PABPC1 NEK9 RPL4 AKAP8L	4.69e-07	1038	54	11	26673895
Pubmed	Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.	TARDBP SAFB HNRNPM LASP1 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	4.84e-07	626	54	9	33644029
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	TARDBP SAFB WIZ HNRNPM TNRC6B SRP54 DNAJA1 RPL4 HNRNPA2B1 AKAP8L MYEF2	7.06e-07	1082	54	11	38697112
Pubmed	Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.	DNAJB1 TARDBP PMPCA EIF4G2 HNRNPM SRP54 HNRNPA1L2 DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L	7.50e-07	1335	54	12	29229926
Pubmed	Lysosomal Signaling Licenses Embryonic Stem Cell Differentiation via Inactivation of Tfe3.	TARDBP WIZ HNRNPM HNRNPA1L2 RPA2 RPL4 HNRNPA2B1	8.17e-07	332	54	7	30595499
Pubmed	PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.	TARDBP PABPC3 EIF4G2 HNRNPM TNRC6B DNAJA1 RPL4 HNRNPA2B1 MYEF2	9.38e-07	678	54	9	30209976
Pubmed	A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.	TARDBP SAFB PABPC3 HNRNPM HNRNPA1L2 PABPC1 MYEF2	1.10e-06	347	54	7	16033648
Pubmed	Interaction network of human early embryonic transcription factors.	NCOA6 YEATS4 WIZ TAF1 BCL9 AKAP8L TBX2	1.18e-06	351	54	7	38297188
Pubmed	SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes.	HNRNPM TNRC6B DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L	1.23e-06	353	54	7	27545878
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	DNAJB1 TARDBP HNRNPM POLD3 DNAJA1 RPA2 PABPC1 NEK9 RPL4 HNRNPA2B1 AKAP8L	1.27e-06	1149	54	11	35446349
Pubmed	Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation.	PABPC3 TNRC6B PABPC1	1.27e-06	14	54	3	19716330
Pubmed	FIP200 controls the TBK1 activation threshold at SQSTM1/p62-positive condensates.	SAFB HNRNPM TNRC6B RPA2 PABPC1 RPL4	1.30e-06	223	54	6	34226595
Pubmed	Proteomic analysis of integrin-associated complexes identifies RCC2 as a dual regulator of Rac1 and Arf6.	DNAJB1 TARDBP EIF4G2 HNRNPM LASP1 RPA2 PABPC1 RPL4 HNRNPA2B1	1.32e-06	707	54	9	19738201
Pubmed	Integrative genomics positions MKRN1 as a novel ribonucleoprotein within the embryonic stem cell gene regulatory network.	PABPC3 HNRNPA1L2 PABPC1 HNRNPA2B1	1.33e-06	52	54	4	26265008
Pubmed	Systematic analysis of human protein complexes identifies chromosome segregation proteins.	DNAJB1 TARDBP DNAJA4 PPME1 HNRNPA1L2 LASP1 DNAJA1 RPA2 PABPC1 NEK9 AKAP8L	1.33e-06	1155	54	11	20360068
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	DNAJB1 KCTD6 DNAJA4 EIF4G2 HNRNPM TNRC6B LASP1 DNAJA1 PABPC1 NEK9 RPL4 HNRNPA2B1	1.38e-06	1415	54	12	28515276
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	TARDBP SAFB HNRNPM DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2	1.42e-06	713	54	9	29802200
Pubmed	Host E3 ligase HUWE1 attenuates the proapoptotic activity of the MERS-CoV accessory protein ORF3 by promoting its ubiquitin-dependent degradation.	DNAJB1 PMPCA EIF4G2 HNRNPM SRP54 POLD3 DNAJA1 NEK9	1.64e-06	534	54	8	35032548
Pubmed	EIF3H Orchestrates Hippo Pathway-Mediated Oncogenesis via Catalytic Control of YAP Stability.	HNRNPM DNAJA1 RPL4 KRT73	1.67e-06	55	54	4	32269044
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	WIZ DNAJA4 PABPC3 HNRNPM TNRC6B BCL9 DNAJA1 PABPC1 NEK9 MYEF2	2.01e-06	963	54	10	28671696
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	DNAJB1 TARDBP NCOA6 YEATS4 WIZ TNRC6B TAF1 NEK9	2.01e-06	549	54	8	38280479
Pubmed	Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1.	TARDBP SAFB HNRNPM PABPC1 RPL4 HNRNPA2B1	2.03e-06	241	54	6	23125841
Pubmed	The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3.	TARDBP PABPC3 HNRNPM HNRNPA1L2 RPA2 PABPC1 HNRNPA2B1 MYEF2	2.10e-06	552	54	8	36293380
Pubmed	Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.	TARDBP SAFB HNRNPM PABPC1 HNRNPA2B1 AKAP8L	2.18e-06	244	54	6	29884807
Pubmed	Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein-protein interaction network.	TARDBP HNRNPM RPA2 PABPC1 HNRNPA2B1	2.30e-06	136	54	5	26979993
Pubmed	Characterization of two cytoplasmic poly(A)-binding proteins, PABPC1 and PABPC2, in mouse spermatogenic cells.	PABPC3 PABPC1	2.37e-06	2	54	2	19020299
Pubmed	ATR kinase activity regulates the intranuclear translocation of ATR and RPA following ionizing radiation.	ATR RPA2	2.37e-06	2	54	2	12814551
Pubmed	Overexpression of the essential Sis1 chaperone reduces TDP-43 effects on toxicity and proteolysis.	DNAJB1 TARDBP	2.37e-06	2	54	2	28531192
Pubmed	Functional compensation for the loss of testis-specific poly(A)-binding protein, PABPC2, during mouse spermatogenesis.	PABPC3 PABPC1	2.37e-06	2	54	2	26971890
Pubmed	Human immunodeficiency virus type 1 Vpr induces DNA replication stress in vitro and in vivo.	ATR RPA2	2.37e-06	2	54	2	16956949
Pubmed	Levels of free PABP are limited by newly polyadenylated mRNA in early Spisula embryogenesis.	PABPC3 PABPC1	2.37e-06	2	54	2	10954604
Pubmed	The promoter of the Poly(A) binding protein 2 (Pabp2) retroposon is derived from the 5'-untranslated region of the Pabp1 progenitor gene.	PABPC3 PABPC1	2.37e-06	2	54	2	10534404
Pubmed	The mouse gene encoding the testis-specific isoform of Poly(A) binding protein (Pabp2) is an expressed retroposon: intimations that gene expression in spermatogenic cells facilitates the creation of new genes.	PABPC3 PABPC1	2.37e-06	2	54	2	9732454
Pubmed	Nucleotide sequence of a mouse testis poly(A) binding protein cDNA.	PABPC3 PABPC1	2.37e-06	2	54	2	1630930
Pubmed	TDP-43 suppresses CGG repeat-induced neurotoxicity through interactions with HnRNP A2/B1.	TARDBP HNRNPA2B1	2.37e-06	2	54	2	24920338
Pubmed	Developmental expression of poly(A) binding protein mRNAs during spermatogenesis in the mouse.	PABPC3 PABPC1	2.37e-06	2	54	2	7893484
Pubmed	Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.	TARDBP SAFB YEATS4 HNRNPM TAF1 PABPC1 HNRNPA2B1	2.38e-06	390	54	7	17643375
Pubmed	Binding of USP4 to cortactin enhances cell migration in HCT116 human colon cancer cells.	DNAJB1 EIF4G2 LASP1 PABPC1 HNRNPA2B1	2.39e-06	137	54	5	37039823
Pubmed	Characterization of SARS-CoV-2 proteins reveals Orf6 pathogenicity, subcellular localization, host interactions and attenuation by Selinexor.	DNAJB1 TARDBP HNRNPM TNRC6B PABPC1 RPL4 AKAP8L	3.20e-06	408	54	7	33766124
Pubmed	The Nuclear SUMO-Targeted Ubiquitin Quality Control Network Regulates the Dynamics of Cytoplasmic Stress Granules.	TARDBP SAFB HNRNPM HNRNPA2B1	3.27e-06	65	54	4	32521226
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	TARDBP SAFB EIF4G2 HNRNPM PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2	3.90e-06	807	54	9	22681889
Pubmed	Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.	TARDBP EIF4G2 HNRNPM SRP54 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	3.98e-06	809	54	9	32129710
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	SAFB EIF4G2 HNRNPM PABPC1 RPL4 HNRNPA2B1 AKAP8L KRT73	4.12e-06	605	54	8	28977666
Pubmed	mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.	TARDBP SAFB HNRNPM PABPC1 RPL4 HNRNPA2B1	4.26e-06	274	54	6	34244482
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	SAFB EIF4G2 HNRNPM SRP54 DNAJA1 PABPC1 RPL4 HNRNPA2B1	4.65e-06	615	54	8	31048545
Pubmed	Inhibition of SAPK2a/p38 prevents hnRNP A0 phosphorylation by MAPKAP-K2 and its interaction with cytokine mRNAs.	HNRNPM HNRNPA1L2 HNRNPA2B1	5.34e-06	22	54	3	12456657
Pubmed	Mammalian HSP40/DNAJ homologs: cloning of novel cDNAs and a proposal for their classification and nomenclature.	DNAJB1 DNAJA4 DNAJA1	5.34e-06	22	54	3	11147971
Pubmed	A Noncanonical Role of Fructose-1, 6-Bisphosphatase 1 Is Essential for Inhibition of Notch1 in Breast Cancer.	SAFB HNRNPM RPA2 PABPC1 RPL4 HNRNPA2B1	5.44e-06	286	54	6	32041737
Pubmed	PARK2 promotes mitochondrial pathway of apoptosis and antimicrotubule drugs chemosensitivity via degradation of phospho-BCL-2.	TARDBP HNRNPM DNAJA1 PABPC1 RPL4 HNRNPA2B1	5.89e-06	290	54	6	32929329
Pubmed	The diverse members of the mammalian HSP70 machine show distinct chaperone-like activities.	DNAJB1 DNAJA4 DNAJA1	6.13e-06	23	54	3	21231916
Pubmed	ARHGAP24 represses β-catenin transactivation-induced invasiveness in hepatocellular carcinoma mainly by acting as a GTPase-independent scaffold.	PABPC3 EIF4G2 HNRNPM SARDH PABPC1 RPL4 AKAP8L	6.16e-06	451	54	7	36168627
Pubmed	Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.	DNAJB1 TARDBP SAFB EIF4G2 HNRNPM PPME1 SRP54 LASP1 DNAJA1 PABPC1 HNRNPA2B1	6.71e-06	1367	54	11	32687490
Pubmed	Embryonic Poly(A)-Binding Protein Is Required During Early Stages of Mouse Oocyte Development for Chromatin Organization, Transcriptional Silencing, and Meiotic Competence.	PABPC3 PABPC1	7.09e-06	3	54	2	26134869
Pubmed	Prion-like nuclear aggregation of TDP-43 during heat shock is regulated by HSP40/70 chaperones.	DNAJB1 TARDBP	7.09e-06	3	54	2	23962724
Pubmed	Human testis expresses a specific poly(A)-binding protein.	PABPC3 PABPC1	7.09e-06	3	54	2	11328870
Pubmed	Superovulation alters embryonic poly(A)-binding protein (Epab) and poly(A)-binding protein, cytoplasmic 1 (Pabpc1) gene expression in mouse oocytes and early embryos.	PABPC3 PABPC1	7.09e-06	3	54	2	25034140
Pubmed	Disruption of scaffold attachment factor B1 leads to TBX2 up-regulation, lack of p19ARF induction, lack of senescence, and cell immortalization.	SAFB TBX2	7.09e-06	3	54	2	16912158
Pubmed	Overexpression of a conserved HSP40 chaperone reduces toxicity of several neurodegenerative disease proteins.	DNAJB1 TARDBP	7.09e-06	3	54	2	29308690
Pubmed	Epab is dispensable for mouse spermatogenesis and male fertility.	PABPC3 PABPC1	7.09e-06	3	54	2	24599567
Pubmed	Differential 3' Processing of Specific Transcripts Expands Regulatory and Protein Diversity Across Neuronal Cell Types.	PABPC3 PABPC1	7.09e-06	3	54	2	29578408
Pubmed	SIRT1 Functions as a Negative Regulator of Eukaryotic Poly(A)RNA Transport.	PABPC3 PABPC1	7.09e-06	3	54	2	28756945
Pubmed	The poly(A)-binding protein genes, EPAB, PABPC1, and PABPC3 are differentially expressed in infertile men with non-obstructive azoospermia.	PABPC3 PABPC1	7.09e-06	3	54	2	26843391
Pubmed	Domain-functional analyses of PIWIL1 and PABPC1 indicate their synergistic roles in protein translation via 3'-UTRs of meiotic mRNAs.	PABPC3 PABPC1	7.09e-06	3	54	2	29701755
Interaction	NAA40 interactions	DNAJB1 TARDBP ALDH1A2 SAFB WIZ EIF4G2 HNRNPM PPME1 TNRC6B SRP54 LASP1 RPA2 PABPC1 NEK9 RPL4	1.45e-08	978	52	15	int:NAA40
Interaction	YAP1 interactions	DNAJB1 TARDBP NCOA6 YEATS4 PABPC3 HNRNPM TNRC6B HNRNPA1L2 TAF1 RPA2 PABPC1 NEK9 RPL4 HNRNPA2B1 TBX2	6.48e-08	1095	52	15	int:YAP1
Interaction	CHD4 interactions	SAFB WIZ ATR EIF4G2 HNRNPM POLD3 SSBP4 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1 AKAP8L KRT73	6.88e-08	938	52	14	int:CHD4
Interaction	DNAJC8 interactions	DNAJB1 PMPCA EIF4G2 HNRNPM ANKRD11 RPA2 RPL4 HNRNPA2B1	1.24e-07	230	52	8	int:DNAJC8
Interaction	RPA4 interactions	DNAJB1 TARDBP SAFB HNRNPM SRP54 POLD3 RPA2 PABPC1 RPL4 HNRNPA2B1	1.99e-07	452	52	10	int:RPA4
Interaction	TOP3B interactions	COL4A5 NCOA6 SAFB WIZ MYO7A ARPC1A HNRNPM ANKRD11 TNRC6B SSBP4 BCL9 DNAJA1 RPA2 GBA2 PABPC1 AKAP8L	4.95e-07	1470	52	16	int:TOP3B
Interaction	EIF3H interactions	TARDBP EIF4G2 HNRNPM TAF1 DNAJA1 RPA2 RPL4 KRT73	5.88e-07	282	52	8	int:EIF3H
Interaction	UBQLN2 interactions	DNAJB1 TARDBP SAFB EIF4G2 HNRNPM SRP54 C1QTNF2 LASP1 DNAJA1 RPA2 PABPC1 HNRNPA2B1	6.48e-07	797	52	12	int:UBQLN2
Interaction	C9orf72 interactions	DNAJB1 TARDBP PMPCA PABPC3 HNRNPM TNRC6B HNRNPA1L2 POLD3 DNAJA1 RPA2 PABPC1 NEK9 RPL4 HNRNPA2B1 AKAP8L	7.17e-07	1319	52	15	int:C9orf72
Interaction	CIC interactions	TARDBP WIZ NKX2-4 HNRNPM TAF1 DNAJA1 RPA2 RPL4 AKAP8L KRT73 TBX2	9.21e-07	673	52	11	int:CIC
Interaction	GATA4 interactions	DNAJB1 TARDBP SAFB WIZ HNRNPM DNAJA1 RPA2 HNRNPA2B1 AKAP8L	9.47e-07	411	52	9	int:GATA4
Interaction	SMC5 interactions	TARDBP NCOA6 SAFB WIZ PABPC3 EIF4G2 HNRNPM ANKRD11 HNRNPA1L2 TAF1 RPA2 PABPC1 HNRNPA2B1	1.07e-06	1000	52	13	int:SMC5
Interaction	ATXN2 interactions	TARDBP YEATS4 TNRC6B GMPR RPA2 PABPC1 RPL4 HNRNPA2B1	1.26e-06	312	52	8	int:ATXN2
Interaction	BAG5 interactions	DNAJB1 DNAJA4 HNRNPM DNAJA1 RPA2 GBA2 PABPC1 RPL4	2.44e-06	341	52	8	int:BAG5
Interaction	PML interactions	DNAJB1 TARDBP SAFB ATR EIF4G2 HNRNPM TNRC6B SRP54 LASP1 POLD3 RPL4 TBX2	3.36e-06	933	52	12	int:PML
Interaction	BAG2 interactions	DNAJB1 TARDBP NCOA6 WIZ DNAJA4 EIF4G2 SRP54 DNAJA1 RPA2 HNRNPA2B1	3.58e-06	622	52	10	int:BAG2
Interaction	PPT1 interactions	DNAJB1 HNRNPM HNRNPA1L2 DNAJA1 RPA2 PABPC1 HNRNPA2B1	4.04e-06	256	52	7	int:PPT1
Interaction	OGT interactions	ALDH1A2 PMPCA EIF4G2 HNRNPM PPME1 SRP54 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1 MYEF2	4.04e-06	950	52	12	int:OGT
Interaction	BIRC3 interactions	DNAJB1 TARDBP SAFB ATR PMPCA ARPC1A EIF4G2 HNRNPM DNAJA1 RPA2 PABPC1 NEK9 RPL4 HNRNPA2B1	4.73e-06	1334	52	14	int:BIRC3
Interaction	GMPS interactions	PMPCA HNRNPM PPME1 TNRC6B RPA2 MYEF2	5.21e-06	172	52	6	int:GMPS
Interaction	MATR3 interactions	TARDBP SAFB HNRNPM HNRNPA1L2 RPA2 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2	5.66e-06	655	52	10	int:MATR3
Interaction	FZR1 interactions	DNAJB1 TARDBP DNAJA4 EIF4G2 HNRNPM TNRC6B SRP54 HNRNPA1L2 DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L	6.16e-06	1172	52	13	int:FZR1
Interaction	RC3H2 interactions	TARDBP PABPC3 EIF4G2 HNRNPM TNRC6B DNAJA1 PABPC1 RPL4 HNRNPA2B1 MYEF2	6.64e-06	667	52	10	int:RC3H2
Interaction	G3BP1 interactions	TARDBP SAFB ARPC1A EIF4G2 PPME1 TNRC6B SRP54 DNAJA1 RPA2 PABPC1 RPL4	7.37e-06	835	52	11	int:G3BP1
Interaction	SSRP1 interactions	TARDBP SAFB HNRNPM ANKRD11 POLD3 RPA2 PABPC1 NEK9 HNRNPA2B1 AKAP8L	8.38e-06	685	52	10	int:SSRP1
Interaction	CDK9 interactions	TARDBP SAFB ATR EIF4G2 HNRNPM LASP1 RPA2 PABPC1 RPL4 HNRNPA2B1	8.38e-06	685	52	10	int:CDK9
Interaction	API5 interactions	HNRNPM LASP1 RPA2 PABPC1 RPL4 HNRNPA2B1	8.67e-06	188	52	6	int:API5
Interaction	TAF15 interactions	DNAJB1 TARDBP SAFB HNRNPM TAF1 RPA2 PABPC1 HNRNPA2B1	9.10e-06	408	52	8	int:TAF15
Interaction	RNF113A interactions	TARDBP HNRNPM TNRC6B DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2 TBX2	9.16e-06	692	52	10	int:RNF113A
Interaction	SOX2 interactions	TARDBP NCOA6 WIZ ARPC1A HNRNPM SRP54 BCL9 DNAJA1 RPA2 RPL4 HNRNPA2B1 AKAP8L MYEF2 TBX2	9.87e-06	1422	52	14	int:SOX2
Interaction	RBM39 interactions	TARDBP NCOA6 SAFB HNRNPM HNRNPA1L2 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2	1.04e-05	1042	52	12	int:RBM39
Interaction	LDB1 interactions	TARDBP TAF1 SSBP4 BCL9 RPA2	1.16e-05	115	52	5	int:LDB1
Interaction	CEBPB interactions	DNAJB1 TARDBP YEATS4 DNAJA4 HNRNPM SRP54 LASP1 POLD3 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1 AKAP8L	1.17e-05	1443	52	14	int:CEBPB
Interaction	CEBPA interactions	DNAJB1 NCOA6 SAFB WIZ EIF4G2 HNRNPM PPME1 SRP54 LASP1 BCL9 RPA2 PABPC1 HNRNPA2B1	1.18e-05	1245	52	13	int:CEBPA
Interaction	BRCA1 interactions	DNAJB1 TARDBP WIZ ATR DNAJA4 HNRNPM PPME1 TNRC6B DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	1.22e-05	1249	52	13	int:BRCA1
Interaction	NCAPH interactions	ARPC1A HNRNPM SRP54 DNAJA1 RPA2 PABPC1 RPL4	1.56e-05	315	52	7	int:NCAPH
Interaction	GLDC interactions	TARDBP SAFB HNRNPM RPA2 PABPC1 RPL4 HNRNPA2B1	1.76e-05	321	52	7	int:GLDC
Interaction	CUL2 interactions	TARDBP HNRNPM TNRC6B DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1 AKAP8L	1.80e-05	591	52	9	int:CUL2
Interaction	ACE2 interactions	TARDBP SAFB ARPC1A EIF4G2 HNRNPM SRP54 HNRNPA1L2 LASP1 RPA2 PABPC1 RPL4 HNRNPA2B1	1.88e-05	1106	52	12	int:ACE2
Interaction	FUS interactions	TARDBP NCOA6 KCTD6 SAFB YEATS4 HNRNPM RPA2 PABPC1 RPL4 HNRNPA2B1	1.99e-05	757	52	10	int:FUS
Interaction	ERG interactions	NCOA6 DNAJA4 HNRNPM BCL9 DNAJA1 HNRNPA2B1	2.28e-05	223	52	6	int:ERG
Interaction	AR interactions	TARDBP NCOA6 WIZ ARPC1A HNRNPM TAF1 BCL9 DNAJA1 PABPC1 NEK9 MYEF2	3.66e-05	992	52	11	int:AR
Interaction	ARL4D interactions	WIZ HNRNPM DNAJA1 RPL4 HNRNPA2B1	3.68e-05	146	52	5	int:ARL4D
Interaction	HNRNPDL interactions	TARDBP PMPCA HNRNPM HNRNPA1L2 RPA2 PABPC1 HNRNPA2B1	3.94e-05	364	52	7	int:HNRNPDL
Interaction	IL17B interactions	HNRNPM RPL4 HNRNPA2B1 MYEF2	4.88e-05	78	52	4	int:IL17B
Interaction	DMRT2 interactions	HNRNPM PABPC1 HNRNPA2B1	5.07e-05	28	52	3	int:DMRT2
Interaction	MEN1 interactions	TARDBP NCOA6 SAFB WIZ HNRNPM TAF1 RPA2 PABPC1 RPL4 AKAP8L MYEF2	5.11e-05	1029	52	11	int:MEN1
Interaction	KIF23 interactions	TARDBP SAFB PABPC3 EIF4G2 HNRNPM HNRNPA1L2 RPA2 PABPC1 RPL4 HNRNPA2B1 AKAP8L	5.20e-05	1031	52	11	int:KIF23
Interaction	RC3H1 interactions	WIZ PABPC3 HNRNPM TNRC6B DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L	5.21e-05	677	52	9	int:RC3H1
Interaction	FN1 interactions	COL4A5 DNAJB1 TARDBP EIF4G2 HNRNPM LASP1 RPA2 PABPC1 RPL4 HNRNPA2B1	5.23e-05	848	52	10	int:FN1
Interaction	RPS6KB2 interactions	DNAJB1 HNRNPM DNAJA1 PABPC1 RPL4 HNRNPA2B1	5.51e-05	261	52	6	int:RPS6KB2
Interaction	CIT interactions	TARDBP SAFB PABPC3 EIF4G2 HNRNPM PPME1 SRP54 HNRNPA1L2 DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L	5.88e-05	1450	52	13	int:CIT
Interaction	KIF20A interactions	TARDBP SAFB PABPC3 HNRNPM TNRC6B HNRNPA1L2 PABPC1 TET3 RPL4 HNRNPA2B1 AKAP8L	6.25e-05	1052	52	11	int:KIF20A
Interaction	ACTC1 interactions	YEATS4 WIZ DNAJA4 HNRNPM LASP1 DNAJA1 RPA2 PABPC1 NEK9	6.31e-05	694	52	9	int:ACTC1
Interaction	PAN2 interactions	HNRNPM TNRC6B DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	6.81e-05	397	52	7	int:PAN2
Interaction	DCUN1D1 interactions	EIF4G2 TNRC6B RPA2 PABPC1 RPL4 HNRNPA2B1	7.35e-05	275	52	6	int:DCUN1D1
Interaction	OTUD1 interactions	TARDBP WIZ TNRC6B DNAJA1 PABPC1	7.59e-05	170	52	5	int:OTUD1
Interaction	VHL interactions	COL4A5 TARDBP HNRNPM ANKRD11 C1QTNF2 DNAJA1 TET3 HNRNPA2B1	8.77e-05	561	52	8	int:VHL
Interaction	EWSR1 interactions	DNAJB1 TARDBP NCOA6 SAFB WIZ HNRNPM TAF1 BCL9 RPA2 HNRNPA2B1	9.09e-05	906	52	10	int:EWSR1
Interaction	DNAJB7 interactions	DNAJB1 HNRNPM RPL4	9.16e-05	34	52	3	int:DNAJB7
Interaction	METTL3 interactions	DNAJB1 TARDBP HNRNPM DNAJA1 RPA2 AKAP8L	9.30e-05	287	52	6	int:METTL3
Interaction	COPS5 interactions	KCTD6 CT45A5 HNRNPM PPME1 TNRC6B LASP1 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	9.48e-05	1102	52	11	int:COPS5
Interaction	CELF1 interactions	TARDBP HNRNPM TNRC6B RPA2 PABPC1 HNRNPA2B1	9.48e-05	288	52	6	int:CELF1
Interaction	WWTR1 interactions	DNAJB1 NCOA6 YEATS4 WIZ TNRC6B NEK9 TBX2	9.97e-05	422	52	7	int:WWTR1
Interaction	ZFP36 interactions	DNAJB1 TNRC6B DNAJA1 PABPC1 HNRNPA2B1	1.02e-04	181	52	5	int:ZFP36
Interaction	NUDCD2 interactions	TARDBP STOML1 HNRNPM RPA2 PABPC1 RPL4 HNRNPA2B1	1.03e-04	424	52	7	int:NUDCD2
Interaction	KLF16 interactions	TARDBP YEATS4 WIZ TAF1 DNAJA1 RPA2 AKAP8L	1.04e-04	425	52	7	int:KLF16
Interaction	SOX17 interactions	NCOA6 WIZ NKX2-4 BCL9	1.05e-04	95	52	4	int:SOX17
Interaction	SREK1 interactions	DNAJB1 SAFB RPA2 PABPC1 HNRNPA2B1	1.08e-04	183	52	5	int:SREK1
Interaction	SNW1 interactions	TARDBP WIZ ATR HNRNPM SRP54 DNAJA1 RPA2 PABPC1 HNRNPA2B1	1.11e-04	747	52	9	int:SNW1
Interaction	PRMT1 interactions	TARDBP SAFB WIZ HNRNPM RPA2 PABPC1 NEK9 RPL4 HNRNPA2B1 AKAP8L	1.12e-04	929	52	10	int:PRMT1
Interaction	MIR363 interactions	SAFB HNRNPM HNRNPA2B1 MYEF2	1.14e-04	97	52	4	int:MIR363
Interaction	SUMO2 interactions	SAFB EIF4G2 HNRNPM HNRNPA1L2 TAF1 DNAJA1 RPL4 HNRNPA2B1	1.26e-04	591	52	8	int:SUMO2
Interaction	STARD9 interactions	HNRNPA1L2 RPA2 HNRNPA2B1	1.28e-04	38	52	3	int:STARD9
Interaction	EIF2S3 interactions	TARDBP SRP54 DNAJA1 RPA2 PABPC1 RPL4	1.30e-04	305	52	6	int:EIF2S3
Interaction	BOP1 interactions	WIZ CT45A5 RPA2 NEK9 RPL4	1.31e-04	191	52	5	int:BOP1
Interaction	MIRLET7D interactions	SAFB HNRNPM HNRNPA2B1 MYEF2	1.34e-04	101	52	4	int:MIRLET7D
Interaction	CSNK2A1 interactions	SAFB YEATS4 CT45A5 EIF4G2 ANKRD11 TAF1 RPA2 PABPC1 RPL4 HNRNPA2B1	1.42e-04	956	52	10	int:CSNK2A1
Interaction	LHX1 interactions	WIZ SSBP4 BCL9 PABPC1	1.44e-04	103	52	4	int:LHX1
Interaction	DCP1B interactions	TNRC6B RPA2 PABPC1 HNRNPA2B1	1.50e-04	104	52	4	int:DCP1B
Interaction	HNRNPF interactions	SAFB HNRNPM PPME1 HNRNPA1L2 LASP1 RPA2 PABPC1 HNRNPA2B1	1.51e-04	607	52	8	int:HNRNPF
Interaction	PHIP interactions	TNRC6B TAF1 RPA2 AKAP8L MYEF2	1.52e-04	197	52	5	int:PHIP
Interaction	ARIH2 interactions	PARP6 HNRNPM TNRC6B PABPC1 RPL4 HNRNPA2B1	1.52e-04	314	52	6	int:ARIH2
Interaction	MYCN interactions	TARDBP SAFB YEATS4 HNRNPM TNRC6B HNRNPA1L2 DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L MYEF2	1.53e-04	1373	52	12	int:MYCN
Interaction	TSPYL2 interactions	YEATS4 HNRNPA1L2 RPL4 HNRNPA2B1	1.55e-04	105	52	4	int:TSPYL2
Interaction	ILK interactions	HNRNPM LASP1 DNAJA1 RPA2 AKAP8L KRT73	1.66e-04	319	52	6	int:ILK
Interaction	IRAK1 interactions	DNAJB1 TARDBP TAF1 DNAJA1 RPA2 AKAP8L	1.68e-04	320	52	6	int:IRAK1
Interaction	RBMX interactions	TARDBP SAFB PMPCA HNRNPM HNRNPA1L2 PABPC1 HNRNPA2B1	1.72e-04	461	52	7	int:RBMX
Interaction	GSK3A interactions	DNAJB1 HNRNPM TNRC6B SRP54 RPA2 PABPC1 RPL4	1.79e-04	464	52	7	int:GSK3A
Interaction	NFX1 interactions	PABPC3 HNRNPM DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	1.84e-04	466	52	7	int:NFX1
Interaction	BTF3 interactions	TARDBP SAFB HNRNPM LASP1 DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	1.84e-04	799	52	9	int:BTF3
Interaction	HPSE interactions	DNAJB1 DNAJA4 DNAJA1	1.86e-04	43	52	3	int:HPSE
Interaction	RBM45 interactions	TARDBP HNRNPM RPA2 PABPC1 HNRNPA2B1	1.91e-04	207	52	5	int:RBM45
Interaction	NUMA1 interactions	NCOA6 YEATS4 WIZ HNRNPA1L2 RPA2 RPL4 HNRNPA2B1	1.91e-04	469	52	7	int:NUMA1
Interaction	ATG13 interactions	SAFB HNRNPM PABPC1 RPL4 HNRNPA2B1	1.96e-04	208	52	5	int:ATG13
Interaction	RECQL4 interactions	DNAJB1 TARDBP PMPCA EIF4G2 HNRNPM SRP54 HNRNPA1L2 DNAJA1 PABPC1 RPL4 HNRNPA2B1 AKAP8L	1.99e-04	1412	52	12	int:RECQL4
Interaction	NPM1 interactions	TARDBP ATR EIF4G2 HNRNPM SRP54 SARDH DNAJA1 RPA2 PABPC1 RPL4 HNRNPA2B1	2.02e-04	1201	52	11	int:NPM1
Interaction	HNRNPC interactions	TARDBP SAFB HNRNPM HNRNPA1L2 DNAJA1 RPA2 PABPC1 HNRNPA2B1	2.03e-04	634	52	8	int:HNRNPC
Interaction	PPP4R2 interactions	CT45A5 PPME1 DNAJA1 RPA2	2.06e-04	113	52	4	int:PPP4R2
Interaction	POLRMT interactions	TARDBP KCTD6 PMPCA RPA2 RPL4	2.09e-04	211	52	5	int:POLRMT
Cytoband	Ensembl 112 genes in cytogenetic band chrXq26	CT45A6 CT45A10 CT45A5 CT45A7	5.08e-05	171	54	4	chrXq26
Cytoband	19p13.3-p13.2	SAFB HNRNPM	1.22e-04	14	54	2	19p13.3-p13.2
Cytoband	Ensembl 112 genes in cytogenetic band chr19p13	DNAJB1 SAFB WIZ HNRNPM SSBP4 AKAP8L	3.42e-04	797	54	6	chr19p13
Cytoband	19p13.1	WIZ SSBP4	1.48e-03	48	54	2	19p13.1
Cytoband	Xq26.3	CT45A6 CT45A5	2.86e-03	67	54	2	Xq26.3
Cytoband	9p13.3	DNAJA1 GBA2	3.57e-03	75	54	2	9p13.3
GeneFamily	RNA binding motif containing	TARDBP SAFB PABPC3 HNRNPM HNRNPA1L2 PABPC1 HNRNPA2B1 MYEF2	3.51e-09	213	33	8	725
GeneFamily	DNAJ (HSP40) heat shock proteins\|C2 tensin-type domain containing	DNAJB1 DNAJA4 DNAJA1	9.64e-05	49	33	3	584
Coexpression	FAN_OVARY_CL1_GPRC5A_TNFRS12A_HIGH_SELECTABLE_FOLLICLE_STROMAL_CELL	TARDBP SAFB EIF4G2 HNRNPM DNAJA1 PABPC1 RPL4 HNRNPA2B1	1.05e-06	380	54	8	M41703
Coexpression	HE_LIM_SUN_FETAL_LUNG_C0_MYOFIBROBLAST_1_CELL	CT45A6 CT45A10 CT45A5 CT45A7	1.26e-05	69	54	4	M45681
Coexpression	WANG_TUMOR_INVASIVENESS_UP	TARDBP PMPCA PABPC3 EIF4G2 RPA2 PABPC1 HNRNPA2B1	1.80e-05	402	54	7	MM1248
Coexpression	LAKE_ADULT_KIDNEY_C8_DECENDING_THIN_LIMB	ALDH1A2 EIF4G2 HNRNPM PABPC1 RPL4 HNRNPA2B1	2.27e-05	278	54	6	M39227
Coexpression	GSE3982_CTRL_VS_PMA_STIM_EOSINOPHIL_DN	COL4A5 DNAJB1 PABPC3 SLC12A8 HNRNPA2B1	5.74e-05	200	54	5	M5364
Coexpression	TABULA_MURIS_SENIS_AORTA_AORTIC_ENDOTHELIAL_CELL_AGEING	PABPC3 LASP1 SSBP4 DNAJA1 PABPC1 RPL4	5.81e-05	329	54	6	MM3671
Coexpression	HE_LIM_SUN_FETAL_LUNG_C0_MYOFIBROBLAST_2_CELL	CT45A6 CT45A10 CT45A5 CT45A7	6.35e-05	104	54	4	M45682
Coexpression	TABULA_MURIS_SENIS_MESENTERIC_ADIPOSE_TISSUE_MESENCHYMAL_STEM_CELL_OF_ADIPOSE_AGEING	DNAJB1 ALDH1A2 PABPC3 LASP1 SSBP4 DNAJA1 PABPC1 RPL4	7.52e-05	685	54	8	MM3782
Coexpression	TABULA_MURIS_SENIS_MAMMARY_GLAND_LUMINAL_EPITHELIAL_CELL_OF_MAMMARY_GLAND_AGEING	DNAJB1 HNRNPM TNRC6B SSBP4 DNAJA1 HNRNPA2B1	8.43e-05	352	54	6	MM3788
Coexpression	LAKE_ADULT_KIDNEY_C10_THIN_ASCENDING_LIMB	EIF4G2 HNRNPM DNAJA1 PABPC1 RPL4 HNRNPA2B1	8.57e-05	353	54	6	M39229
Coexpression	JIANG_MELANOMA_TRM9_CD8	EIF4G2 LASP1 SSBP4 DNAJA1 PABPC1 RPL4 HNRNPA2B1	9.86e-05	526	54	7	M48973
Coexpression	WANG_TUMOR_INVASIVENESS_UP	TARDBP PMPCA EIF4G2 RPA2 PABPC1 HNRNPA2B1	1.36e-04	384	54	6	M1865
Coexpression	AIZARANI_LIVER_C12_NK_NKT_CELLS_4	DNAJB1 DNAJA4 DNAJA1	1.42e-04	49	54	3	M39116
Coexpression	GROSS_HYPOXIA_VIA_HIF1A_ONLY	PABPC3 PABPC1	1.85e-04	10	54	2	MM1122
Coexpression	BUSSLINGER_GASTRIC_IMMUNE_CELLS	ATR MYO7A EIF4G2 ANKRD11 TNRC6B LASP1 SSBP4 RPA2 NEK9 RPL4 HNRNPA2B1	1.94e-04	1492	54	11	M40023
Coexpression	GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_BLUE_UP	DNAJB1 DNAJA4 ESM1 DNAJA1	1.95e-04	139	54	4	M11672
Coexpression	TABULA_MURIS_SENIS_LIVER_ENDOTHELIAL_CELL_OF_HEPATIC_SINUSOID_AGEING	TARDBP PABPC3 HNRNPM ESM1 PABPC1 RPL4	2.15e-04	418	54	6	MM3752
Coexpression	LAKE_ADULT_KIDNEY_C9_THIN_ASCENDING_LIMB	EIF4G2 HNRNPM PABPC1 RPL4 HNRNPA2B1	2.26e-04	268	54	5	M39228
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000	COL4A5 SAFB ANKRD11 SRP54 POLD3 SARDH BCL9 DNAJA1 HNRNPA2B1 MYEF2 TBX2	2.09e-05	983	52	11	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5\|Hippocampus / BrainAtlas - Mouse McCarroll V32	TARDBP EIF4G2 PABPC1 RPL4 HNRNPA2B1	2.62e-06	180	54	5	44988c34861df359a68376500c42a64fbcc4b431
ToppCell	3'\|World / Celltypes from developing, pediatric, Crohn's, & adult GI tract	TARDBP ARPC1A HNRNPM TNRC6B HNRNPA1L3	3.07e-06	186	54	5	e265aac37f33947ff6c83f23f8a2c63bbccd60af
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_myocytic-mes_immature_ASM1_(8)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	CT45A10 GMPR HNRNPA1L3 RPL4 TBX2	3.59e-06	192	54	5	c4efc170852abbcf0c53c2b0f8a0cc9fe7f116c8
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_myocytic-mes_immature_ASM1_(8)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	CT45A10 GMPR HNRNPA1L3 RPL4 TBX2	3.59e-06	192	54	5	4c9d748f209cc1e13d28c8c7f5180ab8522e0fbf
ToppCell	10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_Prolif-F\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	DNAJB1 DNAJA4 HNRNPM DNAJA1 HNRNPA2B1	4.06e-06	197	54	5	2b58ac5d70e1ebd9bf9f2b60ee8079337a723658
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_2\|Hippocampus / BrainAtlas - Mouse McCarroll V32	EIF4G2 PABPC1 RPL4 HNRNPA2B1	2.25e-05	136	54	4	3e13dc0634f3b05e9f9e6c3193f843f62e603b78
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_2-Sox4\|Hippocampus / BrainAtlas - Mouse McCarroll V32	EIF4G2 PABPC1 RPL4 HNRNPA2B1	2.25e-05	136	54	4	0185486c39700dd2f72d79be6d283494dd8379c9
ToppCell	wk_15-18-Mesenchymal-Myofibro_&_SMC-Myofibro_2\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	CT45A6 CT45A10 CT45A5 TBX2	3.94e-05	157	54	4	b9d04ee417c0d8ea0801d10f1c54e138587009fd
ToppCell	Control-CD4+_T_activated\|Control / Disease group and Cell class	DNAJB1 ALDH1A2 DNAJA4 DNAJA1	5.88e-05	174	54	4	2b683e81b315ad22555314433aed5681feb48da8
ToppCell	(08)_Brush+PNEC-(1)_GFP\|(08)_Brush+PNEC / shred by cell type by condition	PABPC1 RPL4	6.32e-05	10	54	2	6c2a17d7efaad0e2be560c5412e724864d2aac27
ToppCell	COVID-19-kidney-Stressed_EC\|COVID-19 / Disease (COVID-19 only), tissue and cell type	DNAJB1 DNAJA4 ESM1 DNAJA1	6.56e-05	179	54	4	754f69bac7a1d5137f5141f6193285ccbfe361cb
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c05-FOS\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	DNAJB1 TNRC6B PABPC1 RPL4	7.45e-05	185	54	4	f60b39010b9210a5f18ccd113758512bd15d7eec
ToppCell	Fetal_29-31_weeks-Immune-enucleated_erythrocyte-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DNAJB1 DNAJA4 PPME1 GMPR	7.45e-05	185	54	4	e8f7da9641b6cf1db1093b4f301ce828fd3a529c
ToppCell	5'-Adult-SmallIntestine-Hematopoietic-T_cells-gdT\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	DNAJB1 DNAJA4 ESM1 DNAJA1	8.10e-05	189	54	4	5c85656f555d91ecc9540faa67717694a4aef92f
ToppCell	wk_15-18-Mesenchymal-Myofibro_&_SMC-Myofibro_1\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	CT45A6 CT45A10 CT45A5 TBX2	8.26e-05	190	54	4	d24af6af3271e34afab744352afd28be8a7cc5c3
ToppCell	H1299-infected-SARSCoV1\|infected / Cell line, Condition and Strain	EIF4G2 PABPC1 RPL4 HNRNPA2B1	8.26e-05	190	54	4	f7bfeefc0f30f81710a5ddd979f19b0c910c4a42
ToppCell	wk_08-11-Mesenchymal-Myofibro_&_SMC-Myofibro_1\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	CT45A6 CT45A10 CT45A5 GMPR	8.26e-05	190	54	4	71a00f63fdd4eb4cc6f190d37e7a0417cdaafacb
ToppCell	10x_3'_v2v3-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_pro-infl_II-Z\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	DNAJB1 DNAJA4 PABPC3 DNAJA1	8.26e-05	190	54	4	4d401b73c0e7eb38e95d0851a128bf12bb0d3a9f
ToppCell	COVID-19-kidney-Stressed_EC\|kidney / Disease (COVID-19 only), tissue and cell type	DNAJB1 DNAJA4 ESM1 DNAJA1	8.43e-05	191	54	4	d35aa842b813ea0eff7362abc894cca4e86b2fb2
ToppCell	ILEUM-inflamed-(1)_Central_Memory_T_cells\|inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	DNAJB1 DNAJA1 PABPC1 RPL4	8.78e-05	193	54	4	c4975fff8927649669e93d3e04308cbf4a48e3e9
ToppCell	10x5'-GI_small-bowel\|World / Manually curated celltypes from each tissue	DNAJB1 DNAJA4 SSBP4 DNAJA1	8.78e-05	193	54	4	cd89dfe53a114078f06343049685883c8e26508f
ToppCell	ILEUM-inflamed-(1)_T_cell-(1)_Central_Memory_T_cells\|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	DNAJB1 DNAJA1 PABPC1 RPL4	9.13e-05	195	54	4	0a200e43e861d5a24c07244c576bba5d67efcf2d
ToppCell	10x5'-lymph-node_spleen-Lymphocytic_T_CD4-Tnaive/CM_CD4_activated\|lymph-node_spleen / Manually curated celltypes from each tissue	DNAJB1 DNAJA4 DNAJA1 KRT73	9.32e-05	196	54	4	c945dc6c56c61732e065daaad7e6f48c02ee183c
ToppCell	Basal-basal-9\|World / Class top	DNAJB1 PABPC1 RPL4 HNRNPA2B1	9.50e-05	197	54	4	66db9eeb66b378471e4bccc2e6de51053d7cfa5c
ToppCell	Basal-basal-5\|World / Class top	DNAJB1 PABPC1 RPL4 HNRNPA2B1	9.50e-05	197	54	4	267db5fc5d59eeadbc7746af08ed6e3cb3da8f3a
ToppCell	systemic_lupus_erythematosus-flare\|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex	EIF4G2 RPA2 PABPC1 HNRNPA2B1	9.69e-05	198	54	4	4c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCell	Basal-basal-8\|World / Class top	DNAJB1 PABPC1 RPL4 HNRNPA2B1	9.69e-05	198	54	4	1ea1515e7320068762387e19f6b47c0cf185549a
ToppCell	ILEUM-non-inflamed-(1)_T_cell-(1)_Trm\|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	DNAJB1 DNAJA1 PABPC1 RPL4	9.69e-05	198	54	4	ff4f4e7f8ebd977dd8082afad3cd980324f42170
ToppCell	390C-Lymphocytic-NK_cells-NK_cell_A\|NK_cells / Donor, Lineage, Cell class and subclass (all cells)	DNAJB1 DNAJA1 PABPC1 HNRNPA2B1	9.69e-05	198	54	4	a1c8e5c332336823c47c04e56b6d7bc8f057c9da
ToppCell	wk_08-11-Mesenchymal-Fibroblast-Early_fibro\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	HNRNPM DNAJA1 HNRNPA1L3 HNRNPA2B1	9.88e-05	199	54	4	d67f5ae05daf942fb79f5b962021f37f4e275f4d
ToppCell	Transverse-T_cell-Th1\|T_cell / Region, Cell class and subclass	DNAJB1 DNAJA4 DNAJA1 PABPC1	9.88e-05	199	54	4	9271d9d36ffe1c169049d4340258f366916adfaf
ToppCell	TCGA-Stomach-Primary_Tumor\|TCGA-Stomach / Sample_Type by Project: Shred V9	TARDBP HNRNPM SLC12A8 HNRNPA2B1	9.88e-05	199	54	4	38f1f612b29feb868322999ceeda78e52447ec4f
ToppCell	Basal\|World / Class top	DNAJB1 PABPC1 RPL4 HNRNPA2B1	9.88e-05	199	54	4	09af08355a659a655d6e4d5262434dffce79c4d9
ToppCell	TCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma\|TCGA-Stomach / Sample_Type by Project: Shred V9	TARDBP HNRNPM SLC12A8 HNRNPA2B1	9.88e-05	199	54	4	b10698aee2e6c17bc559eb4f723024141f914b90
Computational	Translation factors.	EIF4G2 SRP54 PABPC1	3.66e-04	37	41	3	MODULE_149
Computational	Neighborhood of ELAC2	TARDBP HNRNPM SRP54	6.98e-04	46	41	3	GNF2_ELAC2
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DNAJB1 DNAJA4 DNAJA1	8.91e-04	50	41	3	GAVISH_3CA_METAPROGRAM_MACROPHAGES_STRESS_HSP
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DNAJB1 DNAJA4 DNAJA1	8.91e-04	50	41	3	GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_HEAT_SHOCK
Computational	Genes upregulated in subsets of cells of a given type within various tumors	DNAJB1 DNAJA4 DNAJA1	8.91e-04	50	41	3	GAVISH_3CA_METAPROGRAM_CD4_T_CELLS_STRESS_HSP
Computational	Neighborhood of DNMT1	TARDBP SAFB HNRNPM HNRNPA2B1	1.02e-03	118	41	4	MORF_DNMT1
Computational	Neighborhood of ACTG1	EIF4G2 HNRNPM RPL4 HNRNPA2B1	1.23e-03	124	41	4	GCM_ACTG1
Computational	Neighborhood of PPP2CA	TARDBP SAFB HNRNPM HNRNPA2B1	1.42e-03	129	41	4	MORF_PPP2CA
Computational	Neighborhood of SMC1L1	TARDBP HNRNPM HNRNPA2B1	1.67e-03	62	41	3	MORF_SMC1L1
Computational	Neighborhood of DDX5	EIF4G2 HNRNPM HNRNPA2B1	1.91e-03	65	41	3	GCM_DDX5
Computational	Neighborhood of UBE2I	TARDBP EIF4G2 HNRNPM PABPC1 HNRNPA2B1	2.00e-03	238	41	5	MORF_UBE2I
Computational	Neighborhood of CUL1	TARDBP HNRNPM HNRNPA2B1	2.56e-03	72	41	3	MORF_CUL1
Computational	Neighborhood of NPM1	TARDBP RPL4 HNRNPA2B1	2.56e-03	72	41	3	GNF2_NPM1
Computational	Neighborhood of KPNB1	TARDBP HNRNPM SRP54	2.66e-03	73	41	3	GNF2_KPNB1
Computational	Genes in the cancer module 206.	COL4A5 ATR ANKRD11 POLD3	2.72e-03	154	41	4	MODULE_206
Computational	Neighborhood of XRCC5	TARDBP SRP54 HNRNPA2B1	2.88e-03	75	41	3	GNF2_XRCC5
Disease	myopathy (implicated_via_orthology)	COL4A5 HNRNPA1L2 HNRNPA1L3 HNRNPA2B1	1.34e-06	48	50	4	DOID:423 (implicated_via_orthology)
Disease	neurodegenerative disease (implicated_via_orthology)	TARDBP HNRNPA1L2 HNRNPA1L3 HNRNPA2B1	1.08e-04	145	50	4	DOID:1289 (implicated_via_orthology)
Disease	uterine prolapse	POLD3 HNRNPA1L3	3.33e-04	16	50	2	EFO_1001864
Disease	skin pigmentation measurement	NCOA6 ANKRD11 MYEF2	1.64e-03	137	50	3	EFO_0007009
Disease	colon cancer (is_implicated_in)	NCOA6 ATR	1.71e-03	36	50	2	DOID:219 (is_implicated_in)
Disease	reticulocyte count	NCOA6 ATR DNAJA4 TNRC6B GMPR SLC12A8 PABPC1	1.81e-03	1045	50	7	EFO_0007986
Disease	reticulocyte measurement	WIZ ATR DNAJA4 TNRC6B GMPR SLC12A8 PABPC1	1.89e-03	1053	50	7	EFO_0010700
Disease	cholesteryl ester 18:3 measurement	ALDH1A2 POLD3	2.11e-03	40	50	2	EFO_0010346

Protein segments in the cluster

Peptide	Gene	Start	Entry
MGSGFKMGEASDLPR	ANKRD11	1131	Q6UB99
SPFGGFKMSGNGREM	ALDH1A2	481	O94788
FKMSGNGREMGEFGL	ALDH1A2	486	O94788
FTGFSKDGMMQKPGS	CT45A5	76	P0DMU8
MDIFDMFFGGGGRMA	DNAJA4	86	Q8WW22
FGSPMDIFDMFFGGG	DNAJA1	81	P31689
DIFDMFFGGGGRMQR	DNAJA1	86	P31689
FSGFPMGMGGFTNVN	DNAJB1	131	P25685
FTGFSKDGMMQKPGS	CT45A7	76	P0DMV0
SRFGFGFGNGMKQMR	AKAP8L	246	Q9ULX6
GSKMPFGQLMSEFGG	ARPC1A	186	Q92747
SNFGPMKGGNFGGRS	HNRNPA1L2	271	Q32P51
SNFGPMKGGNFEGRS	HNRNPA1L3	226	A0A2R8Y4L2
FFGASFLMGSLGGMG	GDAP1L1	341	Q96MZ0
GSGGSQSGAKMRMGP	PPME1	21	Q9Y570
MMEGGRSKGFGFVCF	PABPC1	326	P11940
FMGPSAGVNVAGMGS	NKX2-4	151	Q9H2Z4
SMAGMAGTGAGFGFS	KRT73	461	Q86Y46
GGFRGTMEADRGMEG	NEK9	776	Q8TD19
FTGFSKDGMMQKPGS	CT45A10	76	P0DMU9
MGGGGGASFDRAIEM	HNRNPM	611	P52272
FEKSRMGPSGGEGME	LASP1	126	Q14847
MMGRMGFPGKDGQDG	C1QTNF2	56	Q9BXJ5
AFGNMCRGGRMFAPT	RPL4	91	P36578
LADMFGQMPGSGIGT	EIF4G2	371	P78344
PPTQSQFGEMGGKFM	EIF4G2	416	P78344
MMEGGRSKGFGFVCF	PABPC3	326	Q9H361
GPMGAGNSVRMEAGF	NCOA6	151	Q14686
NGMGPMGTEGLFRRA	ATR	2521	Q13535
SIMFSMRNGLGGGDD	GBA2	286	Q9HCG7
RPRGMAADVGMGGFS	BCL9	1401	O00512
AGASGFPGTKGEMGM	COL4A5	886	P29400
YRTVSGMDGMKCGPG	ESM1	66	Q9NQ30
SMLGAMFGGDFPTAR	KCTD6	36	Q8NC69
GSKMMFQDGNGGTRS	SLC44A5	196	Q8NCS7
AFGAGADFVMLGGMF	GMPR	231	P36959
FPAATGVMAGFNMGG	SLC12A8	241	A0AV02
FTGFSKDGMMQKPGS	CT45A6	76	P0DMU7
SFGYSGMGKGQHRMP	PARP6	516	Q2NL67
PFAVLNMMMGGGGSF	PMPCA	336	Q10713
MIPGFGTDFMSKGNE	SRP54	351	P61011
NMGGGMNFGAFSINP	TARDBP	306	Q13148
IGFGGLEAMNSMGGF	MYEF2	381	Q9P2K5
GGMGMGLDRMSSSFD	MYEF2	471	Q9P2K5
ASGGGEMFFMRTPQD	TAF1	656	P21675
AKMMGGAGPGSSLEA	WIZ	1111	O95785
NKAPGKGNMMSNFFG	POLD3	226	Q15054
RGFFLGCGFNSAGMM	SARDH	401	Q9UL12
MNRGGMSGRGSFAPG	SAFB	866	Q15424
PGMSEAGNFGGNSFM	RPA2	186	P15927
MKSGNFGGSRNMGGP	HNRNPA2B1	316	P22626
FTMGPGAFSAMGMGH	TBX2	496	Q13207
FLGGSMNSMAGGAPS	STOML1	246	Q9UBI4
TMAAGSMAAGFFQGP	SSBP4	111	Q9BWG4
MVGSFPGSGLSMAGS	TET3	26	O43151
MFKRMAEFGPDSGGR	YEATS4	1	O95619
NKGMPFGMGLGNTSR	TNRC6B	391	Q9UPQ9
DMVDKMFGFLGTSGG	MYO7A	941	Q13402