Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctioncalcium ion binding

NECAB2 PCDHA9 SPTA1 FKBP9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 ADGRV1 CUBN DYSF RYR2 PLCB2 NOTCH4 NIN

1.25e-0674916721GO:0005509
GeneOntologyMolecularFunctionhistone binding

TSPY4 TSPY3 TSPY2 TSPY9 TSPY8 TSPY1 PRMT6 IPO9 TONSL TSPY10

8.14e-0526516710GO:0042393
GeneOntologyBiologicalProcessgonadal mesoderm development

TSPY4 TSPY3 TSPY2 TSPY9 TSPY8 TSPY1 TSPY10

6.55e-1491657GO:0007506
GeneOntologyBiologicalProcesshomophilic cell adhesion via plasma membrane adhesion molecules

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

3.32e-0718716511GO:0007156
GeneOntologyBiologicalProcessaxo-dendritic transport

HDAC6 KIF1B KLC2 DCTN1 MAPK8IP3 KLC3 HTT

1.39e-05981657GO:0008088
GeneOntologyBiologicalProcessnucleosome organization

TSPY4 TSPY3 TSPY2 TSPY9 TSPY8 TSPY1 ARID2 TSPY10

1.91e-051421658GO:0034728
GeneOntologyBiologicalProcessmesoderm development

TSPY4 TSPY3 TSPY2 TSPY9 TSPY8 TSPY1 TSPY10 HTT

3.94e-051571658GO:0007498
GeneOntologyBiologicalProcesscitrulline metabolic process

DDAH2 ATP2B4 HTT

4.08e-0591653GO:0000052
GeneOntologyBiologicalProcesscell-cell adhesion via plasma-membrane adhesion molecules

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

4.57e-0531316511GO:0098742
GeneOntologyBiologicalProcessnucleosome assembly

TSPY4 TSPY3 TSPY2 TSPY9 TSPY8 TSPY1 TSPY10

5.72e-051221657GO:0006334
GeneOntologyBiologicalProcessintracellular transport

SH3TC2 HDAC6 NSF VPS13C KIF1B KLC2 MPDZ TOMM20 HEATR5A CITED1 SEC31A NCOA4 FHIP1B CCDC88B DCTN1 MAPK8IP3 KPNA7 IPO9 USO1 NFKBIA VPS13A OS9 SCRIB HSPA9 KLC3 HTT

1.44e-04149616526GO:0046907
HumanPhenoAbnormal vocal cord morphology

SH3TC2 POLA1 KIF1B DCTN1 MYH14 SBF2 RAI1

1.50e-0561697HP:0008777
HumanPhenoParalysis

SH3TC2 TRPM7 POLA1 KIF1B SEC31A DCTN1 FAH MYH14 SBF2 CFAP410

4.60e-051596910HP:0003470
HumanPhenoDecreased number of peripheral myelinated nerve fibers

SH3TC2 KIF1B KLC2 SBF2 VPS13A RAI1

4.93e-0550696HP:0003380
HumanPhenoVocal cord dysfunction

SH3TC2 POLA1 KIF1B DCTN1 MYH14 SBF2

1.04e-0457696HP:0031801
HumanPhenoVocal cord paralysis

SH3TC2 POLA1 KIF1B DCTN1 MYH14 SBF2

1.04e-0457696HP:0001605
HumanPhenoVocal cord paresis

SH3TC2 POLA1 KIF1B DCTN1 MYH14 SBF2

1.04e-0457696HP:0001604
HumanPhenoWeakness of the vocal cords

SH3TC2 POLA1 KIF1B DCTN1 MYH14 SBF2

1.04e-0457696HP:0001603
DomainCadherin_tail

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.20e-143716411PF15974
DomainCadherin_CBD

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.20e-143716411IPR031904
DomainCadherin_2

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.01e-116516411PF08266
DomainCadherin_N

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.01e-116516411IPR013164
DomainARM-type_fold

PKP4 RTTN ARMH1 ZNFX1 APOB HEATR5A ODAD2 MEI1 KPNA7 ELMO3 IPO9 USO1 NBEAL2 ARID2 CTNNBL1 GCN1 HTT SYMPK

1.16e-0933916418IPR016024
DomainCadherin_CS

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

3.12e-0910916411IPR020894
DomainCADHERIN_1

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

4.59e-0911316411PS00232
DomainCadherin

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

4.59e-0911316411PF00028
DomainCADHERIN_2

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

5.04e-0911416411PS50268
Domain-

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

5.04e-09114164112.60.40.60
DomainCA

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

5.53e-0911516411SM00112
DomainCadherin-like

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

6.07e-0911616411IPR015919
DomainCadherin

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

7.27e-0911816411IPR002126
DomainARM-like

PKP4 RTTN ARMH1 HEATR5A ODAD2 MEI1 KPNA7 ELMO3 IPO9 NBEAL2 ARID2 CTNNBL1 GCN1 HTT SYMPK

1.65e-0827016415IPR011989
Domain-

PKP4 RTTN ARMH1 HEATR5A ODAD2 KPNA7 IPO9 CTNNBL1 GCN1 HTT SYMPK

4.37e-06222164111.25.10.10
DomainNAP_family

TSPY4 TSPY2 TSPY8 TSPY10

1.25e-05171644IPR002164
DomainNAP

TSPY4 TSPY2 TSPY8 TSPY10

1.25e-05171644PF00956
DomainARM

PKP4 ODAD2 KPNA7 USO1 GCN1

2.52e-05401645SM00185
DomainArmadillo

PKP4 ODAD2 KPNA7 USO1 GCN1

5.59e-05471645IPR000225
DomainVPS13

VPS13C VPS13A

2.29e-0431642IPR026847
DomainVPS13_mid_rpt

VPS13C VPS13A

2.29e-0431642PF16910
DomainVPS13

VPS13C VPS13A

2.29e-0431642PF16908
DomainVPS13_N2

VPS13C VPS13A

2.29e-0431642IPR031646
DomainVPS13_mid_rpt

VPS13C VPS13A

2.29e-0431642IPR031642
DomainARM_REPEAT

PKP4 ODAD2 KPNA7 USO1

4.09e-04401644PS50176
DomainSHR-BD

VPS13C VPS13A

4.55e-0441642IPR009543
DomainKinesin_light

KLC2 KLC3

4.55e-0441642IPR002151
DomainVPS13_C

VPS13C VPS13A

4.55e-0441642PF16909
DomainVPS13_C

VPS13C VPS13A

4.55e-0441642IPR031645
DomainSHR-BD

VPS13C VPS13A

4.55e-0441642PF06650
DomainLaminin_domII

LAMA1 LAMA5

7.53e-0451642IPR010307
DomainAutophagy-rel_C

VPS13C VPS13A

7.53e-0451642IPR015412
DomainATG_C

VPS13C VPS13A

7.53e-0451642PF09333
DomainLaminin_aI

LAMA1 LAMA5

7.53e-0451642IPR009254
DomainLaminin_I

LAMA1 LAMA5

7.53e-0451642PF06008
DomainLaminin_II

LAMA1 LAMA5

7.53e-0451642PF06009
DomainRab5-bind

KLC2 KLC3

1.12e-0361642PF09311
DomainRabaptin_Rab5-bd_dom

KLC2 KLC3

1.12e-0361642IPR015390
DomainEAR

ADGRV1 DCTPP1

1.56e-0371642IPR009039
DomainEAR

ADGRV1 DCTPP1

1.56e-0371642PS50912
DomainHEAT

ODAD2 GCN1 HTT SYMPK

1.68e-03581644IPR000357
DomainANK

ASPG ANKHD1 ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

1.72e-032511648SM00248
DomainANK_REPEAT

ASPG ANKHD1 ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

1.81e-032531648PS50088
DomainAnkyrin_rpt-contain_dom

ASPG ANKHD1 ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

1.85e-032541648IPR020683
DomainANK_REP_REGION

ASPG ANKHD1 ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

1.85e-032541648PS50297
DomainChorein_N

VPS13C VPS13A

2.07e-0381642PF12624
DomainVPS13_N

VPS13C VPS13A

2.07e-0381642IPR026854
DomainLAMININ_IVA

LAMA1 LAMA5

2.07e-0381642PS51115
DomainLaminin_B

LAMA1 LAMA5

2.07e-0381642PF00052
DomainLamB

LAMA1 LAMA5

2.07e-0381642SM00281
DomainLaminin_IV

LAMA1 LAMA5

2.07e-0381642IPR000034
DomainAnkyrin_rpt

ASPG ANKHD1 ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

2.25e-032621648IPR002110
DomainArm

PKP4 ODAD2 KPNA7

2.49e-03311643PF00514
DomainAnk_2

ASPG ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

2.95e-032151647PF12796
DomainIon_trans_dom

TRPM7 RYR2 KCNF1 KCNMA1 CACNA1G

3.34e-031141645IPR005821
DomainIon_trans

TRPM7 RYR2 KCNF1 KCNMA1 CACNA1G

3.34e-031141645PF00520
DomainHEAT_REPEAT

HEATR5A ODAD2 GCN1 HTT

3.35e-03701644PS50077
DomainDNA/RNA_helicase_DEAH_CS

DHX16 TTF2 DHX37

3.54e-03351643IPR002464
DomainAnk

ANKHD1 ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

4.07e-032281647PF00023
DomainDEAH_ATP_HELICASE

DHX16 TTF2 DHX37

4.48e-03381643PS00690
Domain-

ASPG ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

6.39e-0324816471.25.40.20
DomainLamG

LAMA1 LAMA5 COL18A1

6.76e-03441643SM00282
Domain-

EXOSC10 REXO5 POLA1

8.12e-034716433.30.420.10
DomainLaminin_N

LAMA1 LAMA5

8.48e-03161642IPR008211
DomainLamNT

LAMA1 LAMA5

8.48e-03161642SM00136
DomainLAMININ_NTER

LAMA1 LAMA5

8.48e-03161642PS51117
DomainLaminin_N

LAMA1 LAMA5

8.48e-03161642PF00055
DomainHEAT

GCN1 HTT SYMPK

8.61e-03481643PF02985
PathwayREACTOME_ER_TO_GOLGI_ANTEROGRADE_TRANSPORT

COG2 NSF SPTA1 SPTBN2 SEC31A DCTN1 USO1 ANKRD28 COG5

3.04e-061561089M27097
PathwayREACTOME_ER_TO_GOLGI_ANTEROGRADE_TRANSPORT

COG2 NSF SPTA1 SPTBN2 SEC31A DCTN1 USO1 ANKRD28 COG5

5.58e-061681089MM14785
PathwayREACTOME_COPI_MEDIATED_ANTEROGRADE_TRANSPORT

COG2 NSF SPTA1 SPTBN2 DCTN1 USO1 COG5

1.29e-051021087M27648
PathwayREACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION

COG2 NSF SPTA1 SPTBN2 SEC31A DCTN1 USO1 ANKRD28 COG5

1.33e-051871089M961
PathwayREACTOME_COPI_MEDIATED_ANTEROGRADE_TRANSPORT

COG2 NSF SPTA1 SPTBN2 DCTN1 USO1 COG5

2.12e-051101087MM15350
PathwayREACTOME_TRANSPORT_TO_THE_GOLGI_AND_SUBSEQUENT_MODIFICATION

COG2 NSF SPTA1 SPTBN2 SEC31A DCTN1 USO1 ANKRD28 COG5

2.45e-052021089MM15650
PathwayREACTOME_ASPARAGINE_N_LINKED_GLYCOSYLATION

COG2 NSF SPTA1 SPTBN2 SEC31A DCTN1 USO1 ANKRD28 OS9 COG5

1.22e-0430710810M894
Pubmed

Monoallelic yet combinatorial expression of variable exons of the protocadherin-alpha gene cluster in single neurons.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

3.44e-23151691115640798
Pubmed

Alpha protocadherins and Pyk2 kinase regulate cortical neuron migration and cytoskeletal dynamics via Rac1 GTPase and WAVE complex in mice.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

3.09e-22171691129911975
Pubmed

CNR/Pcdhalpha family in subplate neurons, and developing cortical connectivity.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

7.92e-22181691115570159
Pubmed

Genomic organization of the family of CNR cadherin genes in mice and humans.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

7.92e-22181691110662547
Pubmed

Developmental epigenetic modification regulates stochastic expression of clustered protocadherin genes, generating single neuron diversity.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

6.06e-20241691124698270
Pubmed

Interaction with protocadherin-gamma regulates the cell surface expression of protocadherin-alpha.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

5.12e-19281691115347688
Pubmed

Diversity revealed by a novel family of cadherins expressed in neurons at a synaptic complex.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4

4.29e-171116989655502
Pubmed

Clustered gamma-protocadherins regulate cortical interneuron programmed cell death.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

3.90e-15571691132633719
Pubmed

CTCF Governs the Identity and Migration of MGE-Derived Cortical Interneurons.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

4.79e-15581691130377227
Pubmed

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

3.10e-14681691111230163
Pubmed

Proteins of the CNR family are multiple receptors for Reelin.

PCDHA9 PCDHA13 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4

4.38e-1412169710612399
Pubmed

A striking organization of a large family of human neural cadherin-like cell adhesion genes.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

6.00e-14721691110380929
Pubmed

Cadherin superfamily genes: functions, genomic organization, and neurologic diversity.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

8.23e-14741691110817752
Pubmed

The DNA sequence and comparative analysis of human chromosome 5.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

9.61e-14751691115372022
Pubmed

Phylogenetic analysis of the cadherin superfamily allows identification of six major subfamilies besides several solitary members.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.30e-13771691110835267
Pubmed

Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

2.01e-13801691110716726
Pubmed

A Genome-Wide CRISPR Screen Identifies Genes Critical for Resistance to FLT3 Inhibitor AC220.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.72e-111191691128625976
Pubmed

Genome-wide association for abdominal subcutaneous and visceral adipose reveals a novel locus for visceral fat in women.

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

3.11e-091931691122589738
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

DHX16 TTF2 EXOSC10 HDAC6 MTHFD1L POLA1 DHX37 PKP4 MCM3 SEC31A URB2 ANKHD1 DCTN1 PHLDB1 IPO9 CCT5 MYH14 MIB1 CTNNBL1 MLH1 ANKRD28 SCRIB GCN1 HSPA9

4.55e-0813531692429467282
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

SZT2 VPS13C LAMA5 TOMM20 PCDHA3 ADGRV1 ANKHD1 CCT5 NBEAL2 MIB1 CACNA1G OXSR1 DNMBP RAI1 NIN

5.48e-085291691514621295
Pubmed

KAP1 facilitates reinstatement of heterochromatin after DNA replication.

DHX16 TTF2 MTHFD1L POLA1 DHX37 APAF1 MCM3 TOMM20 SEC31A URB2 ANKHD1 DCTN1 USO1 CTNNBL1 OXSR1 SCRIB GCN1

7.00e-087041691729955894
Pubmed

Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.

PCDHA9 HDAC6 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA3 PCDHA2 PCDHA1 DLGAP3 VPS13A

8.49e-083291691217474147
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

SZT2 MTHFD1L RTTN LAMA5 ANKHD1 FHIP1B DYSF DCTN1 MAPK8IP3 RHPN1 PHLDB1 TNRC18 EHBP1L1 NBEAL2 SBF2 EXOSC6 DNMBP GCN1 RAI1 HTT SYMPK

1.10e-0711051692135748872
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

DHX16 EXOSC10 MTHFD1L POLA1 DHX37 SPTBN2 URB2 ANKHD1 CCT5 MYH14 PWP2 ANKRD28 GCN1 HSPA9 RAI1 SYMPK

1.42e-076531691622586326
Pubmed

The human cytoplasmic dynein interactome reveals novel activators of motility.

TTF2 MTHFD1L DHX37 VPS13C PKP4 KIF1B SPTBN2 KLC2 MCM3 FHIP1B DCTN1 CCT5 EXOSC6 MIB1 ANKRD28 DNMBP HSPA9 NIN

2.09e-078531691828718761
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

EXOSC10 TRPM7 WDR7 VPS13C KIF1B MCM3 APOB SEC31A RYR2 CCT5 USO1 NFKBIA VPS13A ANKRD28 SCRIB GCN1 HSPA9

2.81e-077771691735844135
Pubmed

Competitive binding of E3 ligases TRIM26 and WWP2 controls SOX2 in glioblastoma.

CCDC170 DDAH2 EXOSC10 SHFL NSF PKP4 SPTBN2 ITPRID2 ANKHD1 CCT5 MYH14 LZTS1 TRIM56 EXOSC6 GCN1 NIN

6.49e-077321691634732716
Pubmed

Common deletion variants causing protocadherin-α deficiency contribute to the complex genetics of BAV and left-sided congenital heart disease.

PCDHA9 PCDHA12 PCDHA7

1.12e-065169334888534
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

WDR7 NSF PKP4 SPTBN2 MPDZ MCM3 ZNFX1 SEC31A DCTN1 MAPK8IP3 DLGAP3 LZTS1 KCNMA1 ANKRD28 SCRIB ATP2B4 HSPA9 RAI1

1.20e-069631691828671696
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

IL16 WDR7 NSF SPTA1 PKP4 KIF1B SPTBN2 FKBP9 KLC2 ZNFX1 DCTN1 MAPK8IP3 PNMA8B DLGAP3 PHLDB1 CCT5 USO1 MYH14 LZTS1 SCRIB ATP2B4 HSPA9

1.89e-0614311692237142655
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

EXOSC10 NSF POLA1 MCM3 SEC31A DCTN1 IPO9 CCT5 USO1 PWP2 SCRIB GCN1 HSPA9 SYMPK

3.20e-066381691433239621
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

TTF2 EXOSC10 SPTBN2 MPDZ MCM3 ANKHD1 DCTN1 CCT5 ARID2 SCRIB GCN1 HTT SYMPK

3.21e-065491691338280479
Pubmed

Systematically defining selective autophagy receptor-specific cargo using autophagosome content profiling.

DHX16 MTHFD1L DHX37 FKBP9 LAMA5 TOMM20 APOB SEC31A URB2 TYSND1 NCOA4 ANKHD1 PLBD2 COL18A1 CCT5 MLH1 OS9 OXSR1 DCTPP1 HSPA9

5.52e-0612971692033545068
Pubmed

Mouse AMACO, a kidney and skin basement membrane associated molecule that mediates RGD-dependent cell attachment.

LAMA1 LAMA5 COL18A1

6.20e-068169319651211
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

DHX16 NSF MTHFD1L POLA1 DHX37 VPS13C MCM3 APOB SEC31A URB2 ANKHD1 DCTN1 IPO9 CCT5 USO1 MYH14 EXOSC6 PWP2 CTNNBL1 GCN1 HSPA9

6.33e-0614251692130948266
Pubmed

FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.

MTHFD1L DHX37 SPTBN2 KLC2 MEI1 DYSF PHLDB1 CCT5 NBEAL2 ARID2 ANKRD28 RAI1

6.37e-064971691236774506
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

EXOSC10 TRPM7 NSF MTHFD1L PKP4 SPTBN2 APAF1 MPDZ ITPRID2 DCTN1 COL18A1 PWP2 MIB1 VPS13A ANKRD28 OS9 SCRIB TADA3 ATP2B4 HSPA9 NIN

1.20e-0514871692133957083
Pubmed

Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.

DHX16 WDR7 KIF1B LAMA5 NBEAL2 KATNIP

1.30e-0510516969628581
Pubmed

A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning.

DHX16 TTF2 HDAC6 DUSP7 ZNFX1 SEC31A TYSND1 NCOA4 LSM1 SHQ1 PHLDB1 SBF2 NFKBIA PWP2 KATNIP ZC3H12C CFAP410

1.36e-0510381691726673895
Pubmed

Functional consequences of necdin nucleocytoplasmic localization.

NCOA4 DCTN1 TADA3 DCBLD2 NIN

1.54e-0564169522442722
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

APAF1 ADGRV1 PHLDB1 ANKRD28 CACNA1G SCRIB GCN1 NIN

1.55e-05225169812168954
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

PKP4 SPTBN2 ITPRID2 IPO9 CCT5 SBF2 MIB1 VPS13A KCNMA1 MLH1 ANKRD28 SCRIB DCTPP1 GCN1 ATP2B4 SYMPK NIN

1.55e-0510491691727880917
Pubmed

Protein interactome reveals converging molecular pathways among autism disorders.

NECAB2 LAMA5 SEC31A ITPRID2 CCDC88B DCTN1 MAPK8IP3 DLGAP3 PHLDB1 MLH1 RASSF4 DCTPP1

2.08e-055601691221653829
Pubmed

HSF1 phosphorylation establishes an active chromatin state via the TRRAP-TIP60 complex and promotes tumorigenesis.

WDR7 NSF MTHFD1L DHX37 VPS13C LAMA5 APOB SEC31A DCTN1 PHLDB1 CCT5 CTNNBL1 CACNA1G NOTCH4

2.09e-057541691435906200
Pubmed

Spectrin tethers and mesh in the biosynthetic pathway.

SPTA1 SPTBN2

2.35e-052169210852813
Pubmed

The laminin response in inflammatory bowel disease: protection or malignancy?

LAMA1 LAMA5

2.35e-052169225347196
Pubmed

The interaction of two tethering factors, p115 and COG complex, is required for Golgi integrity.

COG2 USO1

2.35e-052169217274799
Pubmed

The E3 ubiquitin ligase MIB1 negatively regulates basal IκBα level and modulates NF-κB activation.

NFKBIA MIB1

2.35e-052169222184009
Pubmed

[Correlation between ultrastructural changes of glomerular basement membrane and abnormal distribution of laminins in patients with Alport's syndrome].

LAMA1 LAMA5

2.35e-052169220019771
Pubmed

An Exceptional Gene: Evolution of the TSPY Gene Family in Humans and Other Great Apes.

TSPY9 TSPY1

2.35e-052169224710137
Pubmed

Huntingtin-mediated axonal transport requires arginine methylation by PRMT6.

PRMT6 HTT

2.35e-052169233852844
Pubmed

Structure and function of TSPY, the Y-chromosome gene coding for the "testis-specific protein".

TSPY9 TSPY1

2.35e-05216929678360
Pubmed

Dual-vector gene therapy restores cochlear amplification and auditory sensitivity in a mouse model of DFNB16 hearing loss.

STRC STRCP1

2.35e-052169234910522
Pubmed

TSPY-related sequences represent a microheterogeneous gene family organized as constitutive elements in DYZ5 tandem repeat units on the human Y chromosome.

TSPY9 TSPY1

2.35e-05216928244388
Pubmed

Role of defective calcium regulation in cardiorespiratory dysfunction in Huntington's disease.

RYR2 HTT

2.35e-052169232897880
Pubmed

Presynaptic congenital myasthenic syndrome with a homozygous sequence variant in LAMA5 combines myopia, facial tics, and failure of neuromuscular transmission.

LAMA1 LAMA5

2.35e-052169228544784
Pubmed

In silico discovery and experimental validation of new protein-protein interactions.

DYSF HTT

2.35e-052169221280221
Pubmed

Mutations in a new gene encoding a protein of the hair bundle cause non-syndromic deafness at the DFNB16 locus.

STRC STRCP1

2.35e-052169211687802
Pubmed

Brain-specific transcript variants of 5' and 3' ends of mouse VPS13A and VPS13C.

VPS13C VPS13A

2.35e-052169217196930
Pubmed

The relationship of promoter methylation of calcium voltage-gated channel alpha 1 and interleukin-16 to primary osteoarthritis.

IL16 CACNA1G

2.35e-052169237259724
Pubmed

Intron-less processed Pcdhalpha genes in the central nervous system.

PCDHA8 PCDHA6

2.35e-052169214697259
Pubmed

Battle of the sexes: contrasting roles of testis-specific protein Y-encoded (TSPY) and TSPX in human oncogenesis.

TSPY9 TSPY1

2.35e-052169229974883
Pubmed

Structural Mechanisms of Mutant Huntingtin Aggregation Suppression by the Synthetic Chaperonin-like CCT5 Complex Explained by Cryoelectron Tomography.

CCT5 HTT

2.35e-052169225995452
Pubmed

Genetic Screening of Haploid Neural Stem Cells Reveals that Nfkbia and Atp2b4 are Key Regulators of Oxidative Stress in Neural Precursors.

NFKBIA ATP2B4

2.35e-052169238666459
Pubmed

DLEC1 and MLH1 promoter methylation are associated with poor prognosis in non-small cell lung carcinoma.

MLH1 DLEC1

2.35e-052169218594535
Pubmed

TSPY, the candidate gonadoblastoma gene on the human Y chromosome, has a widely expressed homologue on the X - implications for Y chromosome evolution.

TSPY9 TSPY1

2.35e-052169215241014
Pubmed

Coordinated transport of phosphorylated amyloid-beta precursor protein and c-Jun NH2-terminal kinase-interacting protein-1.

KIF1B KLC2 KLC3

2.40e-0512169316301330
Pubmed

Human Immunodeficiency Virus Type 1 Vpr Mediates Degradation of APC1, a Scaffolding Component of the Anaphase-Promoting Complex/Cyclosome.

COG2 POLA1 ITPRID2 NCOA4 ANKHD1 ANKRD28 SCRIB SYMPK

2.61e-05242169834011540
Pubmed

Cytoplasmic dynein-1 cargo diversity is mediated by the combinatorial assembly of FTS-Hook-FHIP complexes.

KIF1B KLC2 FHIP1B HSPA9 KLC3

2.75e-0572169534882091
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

TTF2 EXOSC10 NSF DCTN1 IPO9 CCT5 USO1 MLH1 OXSR1 SCRIB GCN1 SYMPK

3.03e-055821691220467437
Pubmed

CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.

EXOSC10 NSF MCM3 SEC31A ITPRID2 DCTN1 CCT5 USO1 MYH14 GCN1 HSPA9

3.28e-054941691126831064
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

DHX16 WDR7 KIF1B HEATR5A URB2 FHIP1B DENND11 PHLDB1 KATNIP SCRIB

3.31e-054071691012693553
Pubmed

Maternal Transient Receptor Potential Vanilloid 6 (Trpv6) Is Involved In Offspring Bone Development.

TRPM7 RYR2 CACNA1G ATP2B4

3.49e-0538169430786075
Pubmed

Pro-prion, as a membrane adaptor protein for E3 ligase c-Cbl, facilitates the ubiquitination of IGF-1R, promoting melanoma metastasis.

IL16 HDAC6 POLA1 DUSP7 FKBP9 SEC31A HSF5 PRMT6 TNRC18 EHBP1L1 IPO9 MIB1 SYMPK

3.53e-056891691336543142
Pubmed

Exploring an Alternative Cysteine-Reactive Chemistry to Enable Proteome-Wide PPI Analysis by Cross-Linking Mass Spectrometry.

POLA1 KLC2 MCM3 ANKHD1 CCT5 EXOSC6 MLH1 HSPA9 KLC3 SYMPK

3.59e-054111691036652389
Pubmed

Genome-wide and gene-centric analyses of circulating myeloperoxidase levels in the charge and care consortia.

URB2 LZTS1 NOTCH4

3.94e-0514169323620142
Pubmed

Huntingtin: an iron-regulated protein essential for normal nuclear and perinuclear organelles.

HSPA9 HTT SYMPK

4.91e-0515169311092755
Pubmed

Localization of basement membrane-associated protein isoforms during development of the ocular surface of mouse eye.

KRT12 LAMA1 LAMA5

4.91e-051516939264260
Pubmed

Defining the membrane proteome of NK cells.

EXOSC10 MTHFD1L KLC2 MCM3 TYSND1 CCDC88B DCTN1 EHBP1L1 IPO9 USO1 MYH14 NBEAL2 CTNNBL1 MLH1 COG5 GCN1 ATP2B4

5.94e-0511681691719946888
Pubmed

VPS13A and VPS13C are lipid transport proteins differentially localized at ER contact sites.

VPS13C VPS13A

7.02e-053169230093493
Pubmed

Cochlear outer hair cell horizontal top connectors mediate mature stereocilia bundle mechanics.

STRC STRCP1

7.02e-053169230801007
Pubmed

Interaction of huntingtin-associated protein with dynactin P150Glued.

DCTN1 HTT

7.02e-05316929454836
Pubmed

HDAC6 and microtubules are required for autophagic degradation of aggregated huntingtin.

HDAC6 HTT

7.02e-053169216192271
Pubmed

Two novel CNRs from the CNR gene cluster have molecular features distinct from those of CNR1 to 8.

PCDHA2 PCDHA1

7.02e-053169211401448
Pubmed

Identification of two novel PCDHA9 mutations associated with Hirschsprung's disease.

PCDHA9 PCDHA12

7.02e-053169229477871
Pubmed

Heterologously overexpressed, affinity-purified human meprin alpha is functionally active and cleaves components of the basement membrane in vitro.

LAMA1 LAMA5

7.02e-053169210620696
Pubmed

Targeted disruption of Huntingtin-associated protein-1 (Hap1) results in postnatal death due to depressed feeding behavior.

DCTN1 HTT

7.02e-053169211971876
Pubmed

The striatal kinase DCLK3 produces neuroprotection against mutant huntingtin.

TADA3 HTT

7.02e-053169229534157
Pubmed

Fibulin-2 binds to the short arms of laminin-5 and laminin-1 via conserved amino acid sequences.

LAMA1 LAMA5

7.02e-05316929006922
Pubmed

Structural Basis of Diverse Homophilic Recognition by Clustered α- and β-Protocadherins.

PCDHA9 PCDHA7

7.02e-053169227161523
Pubmed

Laminin isoform-specific promotion of adhesion and migration of human bone marrow progenitor cells.

LAMA1 LAMA5

7.02e-053169212393739
Pubmed

Sequence analysis of the ERCC2 gene regions in human, mouse, and hamster reveals three linked genes.

KLC2 KLC3

7.02e-05316928786141
Pubmed

α1- and α5-containing laminins regulate the development of bile ducts via β1 integrin signals.

LAMA1 LAMA5

7.02e-053169222761447
Pubmed

Small suitability of the DLEC1, MLH1 and TUSC4 mRNA expression analysis as potential prognostic or differentiating markers for NSCLC patients in the Polish population.

MLH1 DLEC1

7.02e-053169228674222
Pubmed

Intragenic enhancers act as alternative promoters.

ZNFX1 TG

7.02e-053169222264824
Pubmed

Loss and gain of function of Grp75 or mitofusin 2 distinctly alter cholesterol metabolism, but all promote triglyceride accumulation in hepatocytes.

APOB HSPA9

7.02e-053169234419589
Pubmed

Faster regeneration associated to high expression of Fam65b and Hdac6 in dysferlin-deficient mouse.

HDAC6 DYSF

7.02e-053169231218594
Pubmed

TBC1D1 interacting proteins, VPS13A and VPS13C, regulate GLUT4 homeostasis in C2C12 myotubes.

VPS13C VPS13A

7.02e-053169233087848
Pubmed

Expression level and methylation status of three tumor suppressor genes, DLEC1, ITGA9 and MLH1, in non-small cell lung cancer.

MLH1 DLEC1

7.02e-053169227287342
Pubmed

Expression of laminin alpha 1, alpha 5 and beta 2 chains during embryogenesis of the kidney and vasculature.

LAMA1 LAMA5

7.02e-05316929049978
InteractionPCDHA10 interactions

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2

5.74e-162216410int:PCDHA10
InteractionPCDHA8 interactions

SLC27A6 PCDHA13 PCDHA12 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

2.06e-115516410int:PCDHA8
InteractionPCDHA7 interactions

PCDHA9 PCDHA12 PCDHA8 PCDHA7 PCDHA4 PCDHA2

7.54e-10141646int:PCDHA7
InteractionPCDHA1 interactions

PCDHA11 PCDHA8 PCDHA4 PCDHA3 PCDHA1

4.12e-0991645int:PCDHA1
InteractionPCDHA11 interactions

PCDHA9 PCDHA12 PCDHA11 PCDHA4 PCDHA3 PCDHA1

6.59e-09191646int:PCDHA11
InteractionFLT3 interactions

TTF2 EXOSC10 PCDHA9 MTHFD1L PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 APOB PCDHA1 GCN1

7.60e-0931816416int:FLT3
InteractionEEF1AKMT3 interactions

TTF2 VPS13C APAF1 SLFN5 ODAD2 ANKHD1 EHBP1L1 ELMO3 CCT5 NBEAL2 SBF2 SELENOO TONSL OXSR1 DNMBP GCN1 SYMPK

7.67e-0936416417int:EEF1AKMT3
InteractionPCDHA4 interactions

PCDHA9 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA4 PCDHA1 COG5

2.89e-08601648int:PCDHA4
InteractionPCDHA3 interactions

PCDHA9 PCDHA11 PCDHA8 PCDHA6 PCDHA3 PCDHA1

2.95e-07341646int:PCDHA3
InteractionPCDHGA10 interactions

PCDHA9 PCDHA12 PCDHA11 PCDHA8 PCDHA4

3.56e-07191645int:PCDHGA10
InteractionTSPY8 interactions

TSPY3 TSPY2 TSPY8

5.29e-0731643int:TSPY8
InteractionLONP2 interactions

PCDHA9 PCDHA12 PCDHA11 PCDHA8 PCDHA4 PCDHA3 OS9

7.02e-07621647int:LONP2
InteractionRFXANK interactions

TTF2 APAF1 ODAD2 ANKHD1 DCTN1 TONSL OXSR1 HTT SYMPK

3.13e-061461649int:RFXANK
InteractionDNAI2 interactions

TTF2 APAF1 CCT5 TONSL OXSR1 GCN1 SYMPK

4.01e-06801647int:DNAI2
InteractionPCDHA9 interactions

PCDHA9 PCDHA11 PCDHA7 PCDHA4 PCDHA3

5.66e-06321645int:PCDHA9
InteractionFGF14 interactions

VPS13C MAPK8IP3 ANKRD44 VPS13A ANKRD28

2.24e-05421645int:FGF14
InteractionHOOK1 interactions

MTHFD1L DHX37 VPS13C KIF1B KLC2 FHIP1B DCTN1 MYH14 ANKRD28 DNMBP

2.81e-0524016410int:HOOK1
InteractionPLEKHG7 interactions

TTF2 APAF1 SLFN5 ODAD2 ANKHD1 OXSR1 DNMBP SYMPK

3.20e-051501648int:PLEKHG7
InteractionPCDHA12 interactions

PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA4

3.51e-05461645int:PCDHA12
InteractionPCDHA6 interactions

PCDHA8 PCDHA6 PCDHA3

4.29e-0591643int:PCDHA6
InteractionTOP3B interactions

SZT2 MTHFD1L KIF1B SPTBN2 RTTN LAMA5 APOB ANKHD1 FHIP1B DYSF DCTN1 LSM1 MAPK8IP3 RHPN1 PHLDB1 TNRC18 EHBP1L1 NBEAL2 TRIM56 SBF2 EXOSC6 MIB1 DNMBP GCN1 RAI1 HTT SYMPK

5.53e-05147016427int:TOP3B
InteractionSIRT7 interactions

DHX16 EXOSC10 MTHFD1L POLA1 DHX37 SPTBN2 URB2 ANKHD1 CCT5 MYH14 PWP2 CTNNBL1 ANKRD28 GCN1 HSPA9 RAI1 SYMPK

1.24e-0474416417int:SIRT7
InteractionPSG11 interactions

APAF1 ODAD2 ANKHD1 OXSR1 SYMPK

1.38e-04611645int:PSG11
InteractionHAPSTR1 interactions

MTHFD1L DHX37 MPDZ ZSWIM2 ITPRID2 ADGRV1 ANKHD1 DCTN1 SHQ1 DLGAP3 CCT5 USO1 CTNNBL1 SCRIB DCTPP1 GCN1 RAI1 NIN

1.47e-0482916418int:HAPSTR1
InteractionCRYBB3 interactions

TTF2 APAF1 ZNFX1 ANKHD1 DNMBP

1.61e-04631645int:CRYBB3
InteractionFHIP2B interactions

KIF1B KLC2 HSPA9 KLC3

1.62e-04341644int:FHIP2B
InteractionOPRM1 interactions

COG2 URB2 CCDC167 KCNF1 ADAM33 GCN1 HTT

1.80e-041441647int:OPRM1
InteractionPCDHA2 interactions

PCDHA8 PCDHA7 PCDHA2

1.80e-04141643int:PCDHA2
Cytoband5q31

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

6.19e-13115169115q31
CytobandEnsembl 112 genes in cytogenetic band chr5q31

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 ANKHD1 HSPA9

1.04e-1029816913chr5q31
CytobandYp11.2

TSPY4 TSPY3 TSPY2 TSPY9 TSPY8 TSPY1 TSPY10

6.32e-08941697Yp11.2
CytobandEnsembl 112 genes in cytogenetic band chrYp11

TSPY4 TSPY3 TSPY2 TSPY9 TSPY8 TSPY1 TSPY10

1.53e-061501697chrYp11
Cytoband8q24.3

RHPN1 PARP10 GSDMD TONSL SCRIB

6.49e-0511316958q24.3
Cytoband2q33.1

C2orf69 ANKRD44 KCTD18

8.96e-045116932q33.1
GeneFamilyClustered protocadherins

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.06e-13641071120
GeneFamilyAnkyrin repeat domain containing

ASPG ANKHD1 ANKRD44 NFKBIA TONSL MIB1 ANKRD28 NOTCH4

9.57e-052421078403
GeneFamilyProtein phosphatase 6 regulatory subunits

ANKRD44 ANKRD28

5.12e-0461072699
GeneFamilyEF-hand domain containing|Spectrins

SPTA1 SPTBN2

7.15e-04710721113
GeneFamilyComponents of oligomeric golgi complex

COG2 COG5

9.49e-0481072493
GeneFamilyArmadillo repeat containing|Protein phosphatase 1 regulatory subunits

PKP4 ODAD2 KPNA7

2.09e-03431073409
GeneFamilyExosome complex

EXOSC10 EXOSC6

2.20e-03121072817
GeneFamilyLaminin subunits

LAMA1 LAMA5

2.20e-03121072626
GeneFamilyDEAH-box helicases

DHX16 DHX37

3.94e-03161072500
GeneFamilyZinc fingers ZZ-type|Lysine acetyltransferases

ZSWIM2 MIB1

4.99e-0318107291
GeneFamilyArmadillo repeat containing|Importins

KPNA7 IPO9

4.99e-03181072596
CoexpressionMIKKELSEN_MEF_HCP_WITH_H3_UNMETHYLATED

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 HSF5 MYH14

1.31e-0826116613MM1277
CoexpressionMIKKELSEN_MEF_HCP_WITH_H3_UNMETHYLATED

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 HSF5 MYH14

4.23e-0823816612M2020
ToppCellfacs-Marrow-Granulocytes-18m-Lymphocytic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NLRP12 SPTBN2 APAF1 NXPE2 KCTD18 DCBLD2 LRRD1 NIN

2.13e-0716316987a04192710f55acf5a4681d5f09942358fdb02ff
ToppCell3'-GW_trimst-1.5-SmallIntestine-Neuronal-neuron_precursor-cycling_neuroblast|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

TTF2 PCDHA6 PCDHA4 CITED1 ADGRV1 RHPN1 IPO9 SCRIB

4.92e-071821698e6968e0bd9cef92052d04ac54e2dd746b37623f6
ToppCellTCGA-Lung-Primary_Tumor-Lung_Carcinoma-Lung_Mucinous_Adenocarcinoma-4|TCGA-Lung / Sample_Type by Project: Shred V9

ITGA11 PCDHA11 PCDHA3 PCDHA2 PCDHA1 NXPE2 KCNF1

7.40e-0713216976480feb3e4e898d610615ce14f598f419c623e07
ToppCellE18.5-samps-Mesenchymal-Matrix_fibroblast-FB-1|E18.5-samps / Age Group, Lineage, Cell class and subclass

IL16 SLC27A6 PCDHA11 PCDHA8 PCDHA7 PCDHA3 PCDHA1

2.57e-061591697b4bc888e978b1b577721b891b0af6ba9a1607044
ToppCell368C-Epithelial_cells-Epithelial-G_(Club-Clara_cells)-|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

SGSH LAMA5 URB2 METTL4 DENND11 MIB1 COG5

7.22e-06186169777bebf576eb9b96ecb4fefb8a82a31aaaa917fc0
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KRT12 SPTBN2 MEI1 RYR2 DLGAP3 KCNF1 ATP2B4

7.22e-0618616977278a1a1bf9bb27aeb03852134defb31b62f30d6
ToppCell368C-Epithelial_cells-Epithelial-G_(Club-Clara_cells)|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

SGSH LAMA5 URB2 METTL4 DENND11 MIB1 COG5

7.22e-06186169713bc41c60fd628af31899a5e8b480e06cc4781be
Disease1,5 anhydroglucitol measurement

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

2.49e-182915911EFO_0008009
Diseasevisceral adipose tissue measurement, body mass index

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.54e-128715911EFO_0004340, EFO_0004765
Diseasepost-traumatic stress disorder symptom measurement

NSF PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

1.51e-08821598EFO_0008535
Diseaseneutrophil count, basophil count

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1

4.08e-0822415911EFO_0004833, EFO_0005090
DiseaseAbnormality of refraction

PCDHA9 MTHFD1L PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 DCTN1 ARID2 KCNMA1 DLEC1 NIN

1.52e-0767315917HP_0000539
Diseasepulse pressure measurement

PCDHA9 CRADD TRPM7 WDR7 LAMA5 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 HEATR5A PCDHA1 MEI1 DYSF LSM1 SBF2 NFKBIA DLEC1 COG5 NIN

4.70e-07139215924EFO_0005763
Diseaseneuroticism measurement, cognitive function measurement

PCDHA9 PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 NXPE2 TG RAI1

2.57e-0656615914EFO_0007660, EFO_0008354
Diseasepost-traumatic stress disorder

PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 IPO9

1.47e-052021598EFO_0001358
Diseaseautosomal recessive nonsyndromic deafness 16 (implicated_via_orthology)

STRC STRCP1

2.89e-0521592DOID:0110471 (implicated_via_orthology)
DiseaseParkinson's disease 23 (implicated_via_orthology)

VPS13C VPS13A

2.89e-0521592DOID:0060896 (implicated_via_orthology)
Diseasechoreaacanthocytosis (implicated_via_orthology)

VPS13C VPS13A

2.89e-0521592DOID:0050766 (implicated_via_orthology)
Diseasevital capacity

SH3TC2 PCDHA9 CRADD SPTBN2 PCDHA13 PCDHA12 PCDHA11 ZSWIM2 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 APOB PCDHA1 ODAD2 RYR2 LZTS1

3.99e-05123615919EFO_0004312
Diseaseautosomal recessive spinocerebellar ataxia 4 (implicated_via_orthology)

VPS13C VPS13A

8.63e-0531592DOID:0111611 (implicated_via_orthology)
DiseaseCohen syndrome (implicated_via_orthology)

VPS13C VPS13A

8.63e-0531592DOID:0111590 (implicated_via_orthology)
Diseaseinterleukin-16 measurement

NLRP12 IL16

8.63e-0531592EFO_0801717
Diseaseexercise test

RYR2 COL18A1 ZC3H12C

1.64e-04201593EFO_0004328
Diseaseprotein S100-A11 measurement

NLRP12 OXSR1

1.72e-0441592EFO_0801958
Diseaseprotein-tyrosine kinase 2-beta measurement

NLRP12 APOB

1.72e-0441592EFO_0801969
Diseasesynucleinopathy (biomarker_via_orthology)

KIF1B DCTN1

1.72e-0441592DOID:0050890 (biomarker_via_orthology)
DiseaseAlzheimer disease, gastroesophageal reflux disease

PCDHA4 PCDHA3 PCDHA2 PCDHA1 CTNNBL1 KLC3 SYMPK

2.48e-042281597EFO_0003948, MONDO_0004975
DiseaseHypoplastic Left Heart Syndrome

PCDHA9 PCDHA13

2.85e-0451592C0152101
Diseaseresponse to statin, myocardial infarction

HEATR5A METTL4

2.85e-0451592EFO_0000612, GO_0036273
Diseaseurate measurement, bone density

FAM234B WDR7 MTHFD1L LAMA5 SEC31A TG USO1 LZTS1 KCNMA1 ATP2B4 NOTCH4

5.59e-0461915911EFO_0003923, EFO_0004531
DiseaseAlzheimer's disease 1 (implicated_via_orthology)

KLC2 KLC3

5.95e-0471592DOID:0080348 (implicated_via_orthology)
DiseaseSarcomatoid Renal Cell Carcinoma

NLRP12 CRADD APAF1 KCNMA1 HSPA9

6.62e-041281595C1266043
DiseaseChromophobe Renal Cell Carcinoma

NLRP12 CRADD APAF1 KCNMA1 HSPA9

6.62e-041281595C1266042
DiseaseCollecting Duct Carcinoma of the Kidney

NLRP12 CRADD APAF1 KCNMA1 HSPA9

6.62e-041281595C1266044
DiseasePapillary Renal Cell Carcinoma

NLRP12 CRADD APAF1 KCNMA1 HSPA9

6.62e-041281595C1306837
DiseaseRenal Cell Carcinoma

NLRP12 CRADD APAF1 KCNMA1 HSPA9

6.62e-041281595C0007134
Diseasecerebellar ataxia (implicated_via_orthology)

VPS13C VPS13A

7.91e-0481592DOID:0050753 (implicated_via_orthology)
Diseasebipolar I disorder

PCDHA1 CUBN ANKHD1 PARP10 ATP2B4

1.02e-031411595EFO_0009963
DiseaseConventional (Clear Cell) Renal Cell Carcinoma

NLRP12 CRADD APAF1 KCNMA1 HSPA9

1.27e-031481595C0279702
Diseaseneutrophil count

PCDHA9 KIF1B PCDHA13 PCDHA12 PCDHA11 PCDHA8 PCDHA7 PCDHA6 PCDHA4 PCDHA3 PCDHA2 PCDHA1 NBEAL2 SBF2 PLCB2 NOTCH4 HTT

1.32e-03138215917EFO_0004833
DiseaseCharcot-Marie-Tooth disease

SH3TC2 KIF1B SBF2

1.51e-03421593cv:C0007959
DiseasePR interval

SLC27A6 PCDHA4 METTL4 DYSF RYR2 ARID2 NFKBIA CACNA1G DLEC1

1.52e-034951599EFO_0004462
DiseaseRetinal Detachment

APAF1 COL18A1

1.54e-03111592C0035305
Diseasepro‐interleukin‐16 measurement

NLRP12 IL16

1.54e-03111592EFO_0010629
Diseaseinterleukin 9 measurement

RTTN MCM3 LZTS1

1.62e-03431593EFO_0008192
DiseaseParkinson's disease (implicated_via_orthology)

HDAC6 NSF VPS13C VPS13A HSPA9

1.65e-031571595DOID:14330 (implicated_via_orthology)
DiseaseDental enamel hypoplasia

DHX37 MYH14

1.84e-03121592EFO_1001304
Diseasedimethylglycine measurement

ANKRD44 FAH CACNA1G

1.97e-03461593EFO_0010476
Diseasesalicylurate measurement

RYR2 CCT5

2.16e-03131592EFO_0010532
DiseaseCharcot-Marie-Tooth disease type 4

SH3TC2 SBF2

2.16e-03131592cv:C4082197
Diseasemortality

NXPE2 COL18A1 VPS13A KCNMA1 NIN

2.51e-031731595EFO_0004352
DiseaseIntellectual Disability

NSF RTTN LAMA1 MAPK8IP3 COL18A1 CACNA1G RAI1 HTT

3.03e-034471598C3714756
Diseaseanthranilic acid measurement

KIF1B COG5

3.29e-03161592EFO_0010460
Diseasephosphatidylcholine 32:2 measurement

METTL4 MIB1

3.29e-03161592EFO_0010374
Diseasecognitive behavioural therapy

COG2 CRADD METTL4

3.81e-03581593EFO_0007820
Diseasealpha synuclein measurement

COG2 OXSR1

4.17e-03181592EFO_0009323
DiseaseBRCAX breast cancer

CCDC170 CTNNBL1

5.14e-03201592EFO_0009443
Diseasesusceptibility to cold sores measurement

DYSF LZTS1 COG5

5.25e-03651593EFO_0008402

Protein segments in the cluster

PeptideGeneStartEntry
RLLGLNELDDLLGKE

PKP4

761

Q99569
DGIGIEELDTLQLEL

TADA3

36

O75528
LEGEQLESILGLLEV

URB2

886

Q14146
IAFGDENGAIEILEL

APAF1

976

O14727
LLLLRELDAEGLEAV

CFAP410

221

O43822
EAVEQLEGVLRLLLG

CCDC88B

131

A6NC98
NRELLGELDGIDVLL

CTNNBL1

276

Q8WYA6
GELDGIDVLLQQLSV

CTNNBL1

281

Q8WYA6
LLLLAAAGEGLERQD

C2orf69

71

Q8N8R5
AENEGLLVAALEELA

DCTN1

856

Q14203
DVVLGLVNDQLGLVD

BPIFB4

336

P59827
LIEFLEVGGVLTLLE

ARMH1

96

Q6PIY5
RELCQLLLEGLEGVL

GSDMD

306

P57764
LLLEGLEGVLRDQLA

GSDMD

311

P57764
VELLNLEGGVAELFR

ADGRV1

1806

Q8WXG9
GLDTLGNIAAELLLD

ARID2

331

Q68CP9
LGDAEIIELLILSGA

ANKRD28

51

O15084
GLVALEAEGQELLLE

ADAM33

66

Q9BZ11
DLDVSLLEGDLVGVI

DNMBP

1301

Q6XZF7
EQLEGLLERVEVGLS

DHX16

916

O60231
GLIEEDDVILLAAAL

MTHFD1L

311

Q6UB35
GIILTLLGVNEDDEG

ATP2B4

281

P23634
DLASEILGLQEAIGE

RAI1

606

Q7Z5J4
GRIAQDLGLELAELV

PCDHA9

46

Q9Y5H5
EEEGTLIIEGLLNIA

RASSF4

46

Q9H2L5
GRIAQDLGLELEELV

PCDHA2

46

Q9Y5H9
GRIAQDLGLELAELV

PCDHA6

46

Q9UN73
QELISAGLVDGRDLV

OXSR1

466

O95747
GRIAQDLGLELAELV

PCDHA7

46

Q9UN72
LEGFGQELRELEVAL

FHIP1B

671

Q8N612
GRIAQDLGLELAELV

PCDHA11

46

Q9Y5I1
GRIAQDLGLELAELV

PCDHA8

46

Q9Y5H6
GRIAQDLGLELAELV

PCDHA3

46

Q9Y5H8
CLLIEELGGIDRIEA

KPNA7

451

A9QM74
DLLGLEILSLQENGL

LRRD1

186

A4D1F6
LEGLELRTQDLEGAL

LZTS1

426

Q9Y250
ELEALIAEENALRGG

KCNMA1

1071

Q12791
LSGEQEVLRGELEAA

MAPK8IP3

451

Q9UPT6
ELALRQGVEADINGL

KRT12

221

Q99456
ELLDVIIADLDGGTI

SBF2

286

Q86WG5
ALQALVELGSDLGLV

ASPG

416

Q86U10
RAQLEVSALLLEDGG

EXOSC6

141

Q5RKV6
QAGLGADERIPELEL

KATNIP

1176

O60303
DLLRAQGLGDIIDID

KIF1B

381

O60333
VRGENVVLLGEIDLE

LSM1

66

O15116
GLEAEVLRLQEELAA

MYH14

1701

Q7Z406
ERISEEVGLLQLLGD

COL18A1

451

P39060
LELADVNGDGLRDVL

FAM234B

151

A2RU67
AADGRLQEGDEILEL

IL16

256

Q14005
SDILVAQEIEVGLLG

EHBP1L1

746

Q8N3D4
ATGEQLLEALELLGN

NSF

671

P46459
LGIVELLVSLGADVN

NFKBIA

196

P25963
EAIELGLGEAQVLLA

KLC3

76

Q6P597
LDGELEAALGLLDII

GCN1

851

Q92616
LGDAEIIELLILSGA

ANKRD44

51

Q8N8A2
QLDLNEDGLIDLAVG

ITGA11

611

Q9UKX5
VVLLLDDLERAGALL

LAMA5

2171

O15230
GVLAGDVTDVLLLDV

HSPA9

426

P38646
QDLELQLEERLLGLE

ITPRID2

1016

P28290
RENLGVALEIDGLEE

CCDC167

6

Q9P0B6
DGLLGDILQDLNTET

POLA1

156

P09884
EAIELGLGEAQVILA

KLC2

66

Q9H0B6
LQIGDLVNIDLDLEI

MIB1

246

Q86YT6
EEVGDVLQGVALADL

MEI1

1191

Q5TIA1
GRVAQDLGLELAELV

PCDHA1

46

Q9Y5I3
GRIAQDLGLELAELV

PCDHA13

46

Q9Y5I0
AILCLLLGGVERDLE

MCM3

316

P25205
DLELAIGGVLRAEQQ

NCOA4

26

Q13772
GRIAQDLGLELAELV

PCDHA4

46

Q9UN74
VLVFDIELLELVAGL

FKBP9

466

O95302
AEEEVLDVLRLNVGG

KCTD18

6

Q6PI47
GIDLSGIEVIENDLL

COG5

216

Q9UP83
LIFAEVNGEAGELEL

CUBN

16

O60494
LERVGILLDEASGVN

EXOSC10

121

Q01780
ALLLLLLAGARAEEE

APOB

16

P04114
AAGVLAQEDLVGLLE

HYI

136

Q5T013
LLEGAELVNRIPAED

HTT

2116

P42858
IGSDQDLGIELLNVL

HEATR5A

1596

Q86XA9
LDVQGLGSREDLLAE

CACNA1G

2141

O43497
LGDLLEQLDHGRAEL

FNDC11

126

Q9BVV2
LLQPGRLELGDVEED

DENND11

61

A4D1U4
SLRLELGAEVLVEGL

CRADD

11

P78560
VQADLELEGLAGLAT

DLGAP3

681

O95886
QEELLLRDSLAVGAG

GFOD2

276

Q3B7J2
QEELEARGGASLLLL

DUSP7

61

Q16829
LELSRAGLEQELEAG

PRMT6

256

Q96LA8
LQILGTIIEDGDDLG

ELMO3

126

Q96BJ8
EEDGLAGQLLSDILA

IPO9

961

Q96P70
LEAELVSGGVLRDNL

CCDC170

411

Q8IYT3
RIGVAIGDQILDLSI

FAH

31

P16930
VLLLLLEDAGAQQGD

DCBLD2

56

Q96PD2
LEGLLLEGLQTSDVD

COG2

211

Q14746
LLLALVGEVGELAEL

DCTPP1

56

Q9H773
LNLEAEALAGTGLVL

HDAC6

76

Q9UBN7
QGRDVGLEVLDNALL

AMT

166

P48728
ALQDLGLRIVEIGDE

DDAH2

106

O95865
GLRIVEIGDENATLD

DDAH2

111

O95865
VRISDLGLAVELLDG

GRK1

331

Q15835
ELVTIGIGQLIALDL

DLEC1

581

Q9Y238
VEALLAAEELLIALG

DHX37

731

Q8IY37
IIQGLIIDAFGELRD

RYR2

4861

Q92736
NQLLGIADRLEAGLE

DYSF

676

O75923
ELILDGSLQLIQEGL

METTL4

156

Q8N3J2
GRIAQDLGLELAELV

PCDHA12

46

Q9UN75
RVVGDGASVDLLLLE

PARP10

176

Q53GL7
LQAEIDGILDGLFLL

RTTN

101

Q86VV8
LLEEVLALGLRTDVG

RSAD1

351

Q9HA92
GGRLALAELEELLEA

SZT2

3296

Q5T011
GEGLLIDQPLFEAEL

HSF5

36

Q4G112
GEEEQLVQGLCALLL

USO1

531

O60763
GEQLLEENGDVLLSL

NIN

1056

Q8N4C6
GDQLDILLEVRDHLG

NXPE2

126

Q96DL1
RDVGGLEVLINLLET

ODAD2

491

Q5T2S8
VGVLLNDLDEIGDAV

LAMA1

1561

P25391
DGQAVGALDLLLALL

NBEAL2

1126

Q6ZNJ1
HREDEGGLLELVALL

PNMA8B

441

Q9ULN7
LGLVQVELEEDGALV

SELENOO

426

Q9BVL4
GLELEELEAAALLVQ

SHQ1

416

Q6PI26
VLAGALLEEAEQLLD

CCT5

111

P48643
LALAAAVLLGDEELQ

SH3TC2

1236

Q8TF17
LNLSQEEELLVLAGG

SEZ6L2

221

Q6UXD5
LEQLDLGGNDLEVLP

SCRIB

176

Q14160
DEEGNLIGLPLLIDN

MLH1

631

P40692
EVAQLLLGLGAAREL

NOTCH4

1781

Q99466
LEETQELLAEVQGLG

PLEKHO1

316

Q53GL0
LQLLKEELEELSGGV

RHPN1

81

Q8TCX5
GLVLQELRDAGVLND

SGSH

251

P51688
QLLGEFEKELEGILL

OS9

431

Q13438
IGLGDRELQELILVD

STRC

1536

Q7RTU9
VELAALLIERGANLE

ANKHD1

451

Q8IWZ3
LVVELGLDRANELPE

CITED1

161

Q99966
SQGGLLEDLDNLILE

SHFL

256

Q9NUL5
VVRGLLDLEDDGDLI

TNRC18

2246

O15417
QAALGEEAVLLLDDI

TSPY9

56

A0A494C1R9
QAALGEEAVLLLDDI

TSPY10

56

P0CW01
ALVLESDLLLGQDLE

ZNF513

31

Q8N8E2
QAALGEEAVLLLDDI

TSPY2

56

A6NKD2
QAALGEEAVLLLDDI

TSPY4

56

P0CV99
RLDNELGGIIAEVNL

VPS13A

2381

Q96RL7
QAALGEEAVLLLDDI

TSPY1

56

Q01534
GDELLEVNGITLLGE

MPDZ

596

O75970
NGLALPERLEDLEVV

SPTBN2

876

O15020
IIVDEGGDALLVSLV

PWP2

71

Q15269
LAIVDEELEGTLAQG

TONSL

141

Q96HA7
QLAIESLDGILVDGI

REXO5

556

Q96IC2
TLLSLEDLNGGILVD

VPS13C

2941

Q709C8
IVDLGDNLEDALILD

SPTA1

2216

P02549
GEVLALEEERAQVLG

PHLDB1

711

Q86UU1
EELLQRGAAQLAELG

PLCB2

921

Q00722
GDIILLLDSDNDGIR

SYMPK

166

Q92797
QAALGEEAVLLLDDI

TSPY3

56

P0CV98
QAALGEEAVLLLDDI

TSPY8

56

P0CW00
EGILELLQSFEDQGL

ZNFX1

386

Q9P2E3
ALQLGLGEREISDLL

ZSWIM2

96

Q8NEG5
LERILLQLLGDADQE

TEX13A

241

Q9BXU3
LLIGLGDQELQELIL

STRCP1

1531

A6NGW2
LLQLSGDLEDLELAL

PLBD2

216

Q8NHP8
LGTDALINDILGELV

ZC3H12C

186

Q9C0D7
LVVGADLLGTVEEIL

SLC27A6

156

Q9Y2P4
ADAIILAIAGGQELL

SEC31A

596

O94979
QGRELAETGLELLLD

TG

241

P01266
GLNEVLDEVCLDRLG

WDR7

811

Q9Y4E6
GNLEIIEDLNLEEIL

SLFN5

756

Q08AF3
LEEIQLGEELLAQGE

TOMM20

71

Q15388
GELLVLDLQGVGENL

TRPM7

1761

Q96QT4
ALLGVRLGQEEVEEE

TYSND1

186

Q2T9J0
LEGLLAGVDNNLVEL

TRIM56

216

Q9BRZ2
ELKGEGLVLSLEEQL

TTF2

941

Q9UNY4
AQDILGAVTLLLEGV

THPO

81

P40225
QLILDDLGVDAAEGR

KCNF1

146

Q9H3M0
ELDLTGNALEDLGLR

NLRP12

831

P59046
LRELDLSLNELGDLG

NLRP12

886

P59046
EGLEAQISRLAELIG

NECAB2

246

Q7Z6G3