Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionbenzodiazepine receptor binding

RIMBP3 RIMBP3C RIMBP3B

5.88e-0651693GO:0030156
GeneOntologyBiologicalProcesssexual reproduction

ADCY10 CIB1 SPATA31A3 SPATA31A7 LRRK2 PRSS55 AKAP3 PRAMEF1 PRAMEF2 AP3B1 PRAMEF13 SPATA31A6 TTK SPATA31A5 DICER1 RIMBP3 TUBGCP6 DDIAS BMPR1B SPATA31A1 UBE3A PRAMEF14 TAF7L SGO2 RIMBP3C GARIN1B RIMBP3B TERB2 RAD54L RAD21

3.23e-07131217030GO:0019953
GeneOntologyBiologicalProcessgamete generation

ADCY10 CIB1 SPATA31A3 SPATA31A7 LRRK2 PRAMEF1 PRAMEF2 AP3B1 PRAMEF13 SPATA31A6 TTK SPATA31A5 DICER1 RIMBP3 DDIAS BMPR1B SPATA31A1 PRAMEF14 TAF7L SGO2 RIMBP3C GARIN1B RIMBP3B TERB2

1.82e-0698217024GO:0007276
GeneOntologyBiologicalProcessdevelopmental process involved in reproduction

ADCY10 CIB1 SPATA31A3 SPATA31A7 LRRK2 NCOA4 PRAMEF1 PRAMEF2 AP3B1 PRAMEF13 SPATA31A6 SPATA31A5 DICER1 RIMBP3 DDIAS BMPR1B SPATA31A1 NKX2-1 UBE3A PRAMEF14 TAF7L RIMBP3C GARIN1B PRKDC RIMBP3B TERB2

9.73e-06123517026GO:0003006
GeneOntologyBiologicalProcessmulticellular organismal reproductive process

ADCY10 CIB1 SPATA31A3 SPATA31A7 LRRK2 PRAMEF1 PRAMEF2 AP3B1 PRAMEF13 SPATA31A6 TTK SPATA31A5 DICER1 RIMBP3 DDIAS BMPR1B SPATA31A1 PRAMEF14 TAF7L SGO2 RIMBP3C GARIN1B RIMBP3B TERB2

4.66e-05119417024GO:0048609
GeneOntologyBiologicalProcessgerm cell development

ADCY10 CIB1 PRAMEF1 PRAMEF2 PRAMEF13 RIMBP3 DDIAS BMPR1B PRAMEF14 TAF7L RIMBP3C GARIN1B RIMBP3B TERB2

4.82e-0548217014GO:0007281
GeneOntologyBiologicalProcessmale gamete generation

ADCY10 CIB1 SPATA31A3 SPATA31A7 LRRK2 AP3B1 SPATA31A6 SPATA31A5 DICER1 RIMBP3 DDIAS SPATA31A1 TAF7L SGO2 RIMBP3C GARIN1B RIMBP3B TERB2

6.07e-0576217018GO:0048232
GeneOntologyBiologicalProcesspositive regulation of sister chromatid cohesion

SLF1 SGO2 RAD21

8.65e-05111703GO:0045876
GeneOntologyBiologicalProcessblastocyst development

AKAP3 NDUFA2 PRAMEF1 PRAMEF2 PRAMEF13 DICER1 PRAMEF14 FURIN

1.22e-041791708GO:0001824
GeneOntologyBiologicalProcesscellular process involved in reproduction in multicellular organism

ADCY10 CIB1 PRAMEF1 PRAMEF2 PRAMEF13 RIMBP3 DDIAS BMPR1B PRAMEF14 TAF7L RIMBP3C GARIN1B RIMBP3B TERB2

1.24e-0452717014GO:0022412
GeneOntologyBiologicalProcessspermatogenesis

ADCY10 CIB1 SPATA31A3 SPATA31A7 LRRK2 AP3B1 SPATA31A6 SPATA31A5 DICER1 RIMBP3 DDIAS SPATA31A1 TAF7L RIMBP3C GARIN1B RIMBP3B TERB2

1.46e-0474417017GO:0007283
GeneOntologyBiologicalProcessvacuolar transport

LRRK2 NCOA4 ASB15 AP3B1 LYST ARSB VPS13A AP1G2

1.65e-041871708GO:0007034
GeneOntologyCellularComponentacrosomal vesicle

SPATA31A3 SPATA31A7 PRSS55 AKAP3 PRAMEF1 PRAMEF2 PRAMEF13 SPATA31A6 SPATA31A5 SPATA31A1

7.90e-0620617110GO:0001669
MousePhenoabnormal kidney morphology

DCAF15 MYO9A KIF26B LRRK2 PGBD1 CHD2 FRYL PSME1 PRAMEF1 PRAMEF2 AP3B1 PRAMEF13 LYST DHX8 PIKFYVE JAK1 NPHP3 BRAF PIK3C2A SETD5 FAM120C PRAMEF14 CLMP GARIN1B PRKDC BMPER PRSS48 PGBD5 PCNT

1.02e-05136312729MP:0002135
DomainARM-type_fold

MON2 RELCH MROH2A LRRK2 MROH5 ZNFX1 HEATR5A FRYL HUWE1 AP3B1 LYST ARFGEF3 PIK3C2A EIF4G2 LTN1 AP1G2 STAG3L3 PRKDC LRBA

2.62e-1033916919IPR016024
DomainARM-like

MON2 RELCH MROH2A LRRK2 MROH5 DOCK10 HEATR5A FRYL HUWE1 AP3B1 TAF7L LTN1 AP1G2 STAG3L3 PRKDC LRBA

3.29e-0927016916IPR011989
DomainDUF4599

SPATA31A3 SPATA31A7 SPATA31A6 SPATA31A5

3.03e-06121694PF15371
DomainDUF4599

SPATA31A3 SPATA31A7 SPATA31A6 SPATA31A5

3.03e-06121694IPR027970
Domain-

MON2 RELCH LRRK2 MROH5 HEATR5A FRYL AP3B1 AP1G2 PRKDC LRBA

3.54e-05222169101.25.10.10
DomainPH-BEACH_dom

LYST LRBA NSMAF

3.94e-0581693IPR023362
Domain-

LYST LRBA NSMAF

3.94e-05816932.30.29.40
DomainPH_BEACH

LYST LRBA NSMAF

3.94e-0581693PS51783
DomainBEACH

LYST LRBA NSMAF

5.87e-0591693PS50197
DomainBeach

LYST LRBA NSMAF

5.87e-0591693PF02138
Domain-

LYST LRBA NSMAF

5.87e-05916931.10.1540.10
DomainBeach

LYST LRBA NSMAF

5.87e-0591693SM01026
DomainBEACH_dom

LYST LRBA NSMAF

5.87e-0591693IPR000409
DomainP-loop_NTPase

ADCY10 SAMD9 MYO9A KIF26B SMARCAL1 LRRK2 PEX6 ZNFX1 CHD2 CMSS1 DICER1 DHX8 NPHP3 NOD1 TRANK1 KIFC3 CDC6 NLRP4 RAD54L

2.50e-0484816919IPR027417
DomainDCB_dom

MON2 ARFGEF3

4.83e-0441692IPR032629
DomainSec7_C

MON2 ARFGEF3

4.83e-0441692IPR015403
DomainDUF1981

MON2 ARFGEF3

4.83e-0441692PF09324
DomainDCB

MON2 ARFGEF3

4.83e-0441692PF16213
DomainPRAME_family

PRAMEF1 PRAMEF2 PRAMEF13

6.34e-04191693IPR026271
DomainDDE_Tnp_1_7

PGBD1 PGBD5

8.00e-0451692PF13843
DomainPGBD

PGBD1 PGBD5

8.00e-0451692IPR029526
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

BIRC8 PPRC1 FRMPD1 KBTBD8 CHD2 FRYL HUWE1 NCOA4 PRAMEF1 PRAMEF2 AP3B1 PRAMEF13 TIAM2 ESCO2 ZNF182 NPHP3 BRAF SETD5 CLMN PRAMEF14 EIF4G2 LTN1 ANKRD12 DMWD ATP2B1 NLRP4 PCNT

6.73e-1210841742711544199
Pubmed

The testis-specific VAD1.3/AEP1 interacts with β-actin and syntaxin 1 and directs peri-nuclear/Golgi expression with bipartite nucleus localization (BNL) sequence.

SPATA31A3 SPATA31A7 SPATA31A6 SPATA31A5 SPATA31A1

1.77e-116174520850414
Pubmed

Targeted disruption of the spermatid-specific gene Spata31 causes male infertility.

SPATA31A3 SPATA31A7 SPATA31A6 SPATA31A5 SPATA31A1

1.77e-116174525930072
Pubmed

Transcriptome analysis of mouse stem cells and early embryos.

MON2 FOXN2 MED14 PRAMEF1 PRAMEF2 PRAMEF13 BIRC6 SMYD4 PRAMEF14 EIF4G2 SGO2 ATP2B1 RAD54L

4.23e-083631741314691545
Pubmed

Majority of cerebrospinal fluid-contacting neurons in the spinal cord of C57Bl/6N mice is present in ectopic position unlike in other studied experimental mice strains and mammalian species.

SPATA31A3 SPATA31A7 SPATA31A6 SPATA31A5 SPATA31A1

1.16e-0724174532212159
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

MON2 WDR7 PPRC1 FRMPD1 DOCK10 ARHGEF12 HEATR5A ARFGEF3 SETD5 TBC1D1 ANKRD12 CAMSAP2 PCNT

1.58e-074071741312693553
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

MON2 PPRC1 MED14 PEX6 TBC1D25 FRYL HUWE1 BIRC6 LYST TIAM2 PIKFYVE GAREM2 SETD5 FURIN AP1G2 PRKDC KIFC3 LRBA DMWD PCNT BAHCC1

1.81e-0711051742135748872
Pubmed

Differences in gene expression between mouse and human for dynamically regulated genes in early embryo.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14 NLRP4

2.65e-0728174525089626
Pubmed

RIM-BP3 is a manchette-associated protein essential for spermiogenesis.

RIMBP3 RIMBP3C RIMBP3B

4.91e-074174319091768
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

PPRC1 PARP8 STARD10 SANBR LPCAT4 CHD2 C2orf78 LYST FER1L6 RFTN1 BMPR1B SETD5 VPS13A PLXNA4 SMARCC2 PRKDC DMWD TSACC SEC61A1 CAMSAP2 ATP2B1 PCNT BAHCC1

9.68e-0714421742335575683
Pubmed

Structure and evolution of RIM-BP genes: identification of a novel family member.

RIMBP3 RIMBP3C RIMBP3B

1.22e-065174317855024
Pubmed

STAG3, a novel gene encoding a protein involved in meiotic chromosome pairing and location of STAG3-related genes flanking the Williams-Beuren syndrome deletion.

STAG3L1 STAG3L2 STAG3L3

1.22e-065174310698974
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

TBC1D19 AGO2 MYO9A STARD10 FRMPD1 CHD2 FRYL HUWE1 ARFGEF3 BMPR1B SETD5 STAG3L1 FAM120C CLMN TBC1D1 KIAA1217 TRMT13 ANKRD12 GREB1 LRBA ATP2B1 NSMAF PCNT

1.66e-0614891742328611215
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

MYO9A KIF26B PARP8 FRYL TTK MELK LYST ARFGEF3 BRAF PIK3C2A CLMN AASS TBC1D1 KIAA1217 DYRK1B CAMSAP2 ATP2B1

1.73e-068611741736931259
Pubmed

The promoter of the oocyte-specific gene, Oog1, functions in both male and female meiotic germ cells in transgenic mice.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

1.75e-0618174423894331
Pubmed

Oogenesin is a novel mouse protein expressed in oocytes and early cleavage-stage embryos.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

1.75e-0618174412890732
Pubmed

Oocyte-specific gene Oog1 suppresses the expression of spermatogenesis-specific genes in oocytes.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

1.75e-0618174429731491
Pubmed

Identification of a new expanding family of genes characterized by atypical LRR domains. Localization of a cluster preferentially expressed in oocyte.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

1.75e-0618174414675769
Pubmed

Pramel7 mediates ground-state pluripotency through proteasomal-epigenetic combined pathways.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

2.21e-0619174428604677
Pubmed

The ubiquitin ligase human TRIM71 regulates let-7 microRNA biogenesis via modulation of Lin28B protein.

AGO2 TRIM71 DICER1

2.43e-066174324602972
Pubmed

Sensing of commensal organisms by the intracellular sensor NOD1 mediates experimental pancreatitis.

NOD1 TLR2 PRKDC

2.43e-066174322902233
Pubmed

Preferentially Expressed Antigen in Melanoma (PRAME) and the PRAME Family of Leucine-Rich Repeat Proteins.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

2.75e-0620174426694250
Pubmed

Oog1, an oocyte-specific protein, interacts with Ras and Ras-signaling proteins during early embryogenesis.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

2.75e-0620174416580637
Pubmed

Pramel7 mediates LIF/STAT3-dependent self-renewal in embryonic stem cells.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

2.75e-0620174421425410
Pubmed

Genetic variants in apoptosis and immunoregulation-related genes are associated with risk of chronic lymphocytic leukemia.

TRAF3 CASP10 ESCO2 NOD1 PRKDC CDC6 NLRP4 RAD21

3.60e-06179174819074885
Pubmed

Sertoli cell-only phenotype and scRNA-seq define PRAMEF12 as a factor essential for spermatogenesis in mice.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

4.13e-0622174431729367
Pubmed

TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.

SMARCAL1 TBC1D25 ZNFX1 CHD2 CMSS1 AP3B1 FER1L6 LRR1 PPP2R2B UBE3A AASS VPS13A SMARCC2 ATP2B1

4.50e-066381741431182584
Pubmed

Oogenesis specific genes (Nobox, Oct4, Bmp15, Gdf9, Oogenesin1 and Oogenesin2) are differentially expressed during natural and gonadotropin-induced mouse follicular development.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

4.98e-0623174419480014
Pubmed

Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV.

HSP90AB4P LPCAT4 PEX6 ACVR1B HUWE1 NCOA4 DICER1 LRRC47 JAK1 OSTC BMPR1B DTWD2 FURIN LTN1 VPS13A PRKDC LRBA CAMSAP2

6.96e-0610611741833845483
Pubmed

Incomplete reactivation of Oct4-related genes in mouse embryos cloned from somatic nuclei.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

7.05e-0625174412620990
Pubmed

MAGE-B4, a binding partner of PRAMEF12, is dispensable for spermatogenesis and male fertility in mice.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

7.05e-0625174437451217
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

HUWE1 AP3B1 TTK MELK DHX8 LRRC47 EIF2D FAM120C MED12L SMARCC2 PRKDC PCNT RAD21

8.26e-065821741320467437
Pubmed

Expression profiling in transgenic FVB/N embryonic stem cells overexpressing STAT3.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

8.30e-0626174418500982
Pubmed

An abundance of X-linked genes expressed in spermatogonia.

PRAMEF1 PRAMEF2 PRAMEF13 TAF7L NLRP4

1.19e-0559174511279525
Pubmed

Thirteen Ovary-Enriched Genes Are Individually Not Essential for Female Fertility in Mice.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

1.50e-0530174438786026
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

RELCH AGO2 SANBR MELK DICER1 TIAM2 LRRC47 TUBGCP6 TRANK1 MED12L KDM4A RAD21

1.59e-055291741214621295
Pubmed

The nuclear interactome of DYRK1A reveals a functional role in DNA damage repair.

HUWE1 AP3B1 TTK LRRC47 LRBA CAMSAP2

1.62e-05106174631024071
Pubmed

LSM14B is essential for oocyte meiotic maturation by regulating maternal mRNA storage and clearance.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

1.95e-0532174437889087
Pubmed

MicroRNAs are indispensable for reprogramming mouse embryonic fibroblasts into induced stem cell-like cells.

KIF26B DICER1

2.49e-052174222737231
Pubmed

An immunocompromised murine model of chronic Bartonella infection.

LYST PRKDC

2.49e-052174220395436
Pubmed

MicroRNA-Independent Modulation of DICER1 Expression by hAgo2.

AGO2 DICER1

2.49e-052174232778571
Pubmed

Nonspecific immune responses and mechanisms of resistance to Eimeria papillata infections in mice.

LYST PRKDC

2.49e-05217429234770
Pubmed

Non-viral reprogramming of fibroblasts into induced pluripotent stem cells by Sleeping Beauty and piggyBac transposons.

PGBD1 PRKDC

2.49e-052174224928388
Pubmed

Therapeutic targeting of CC ligand 21 or CC chemokine receptor 7 abrogates pulmonary fibrosis induced by the adoptive transfer of human pulmonary fibroblasts to immunodeficient mice.

LYST PRKDC

2.49e-052174217392156
Pubmed

Decreased AGO2 and DCR1 in PBMCs from War Veterans with PTSD leads to diminished miRNA resulting in elevated inflammation.

AGO2 DICER1

2.49e-052174228850112
Pubmed

CTG repeat instability and size variation timing in DNA repair-deficient mice.

PRKDC RAD54L

2.49e-052174212727892
Pubmed

Signs and lesions of experimental Sendai virus infection in two genetically distinct strains of SCID/beige mice.

LYST PRKDC

2.49e-05217428140728
Pubmed

Spontaneous and experimental infections in scid and scid/beige mice.

LYST PRKDC

2.49e-05217428320959
Pubmed

B-Raf(V600E) signaling deregulates the mitotic spindle checkpoint through stabilizing Mps1 levels in melanoma cells.

TTK BRAF

2.49e-052174218071315
Pubmed

Adaptor Protein-3-Mediated Trafficking of TLR2 Ligands Controls Specificity of Inflammatory Responses but Not Adaptor Complex Assembly.

AP3B1 TLR2

2.49e-052174226423153
Pubmed

Genome-wide identification of targets and function of individual MicroRNAs in mouse embryonic stem cells.

AGO2 DICER1

2.49e-052174220975942
Pubmed

Global analysis of AGO2-bound RNAs reveals that miRNAs induce cleavage of target RNAs with limited complementarity.

AGO2 PRKDC

2.49e-052174229031931
Pubmed

TBC1Domain Family Member 25 deficiency aggravates cerebral ischemia-reperfusion injury via TAK1-JNK/p38 pathway.

TBC1D25 TBC1D1

2.49e-052174234837397
Pubmed

ALK mutants in the kinase domain exhibit altered kinase activity and differential sensitivity to small molecule ALK inhibitors.

LYST PRKDC

2.49e-052174219249873
Pubmed

Role of mammalian Rad54 in telomere length maintenance.

PRKDC RAD54L

2.49e-052174212897131
Pubmed

Studies of virus-induced myocardial injury in mice: value of the scid mutation on different genetic backgrounds and combined with other mutations.

LYST PRKDC

2.49e-05217428391609
Pubmed

Murine granulated metrial gland cell population in beige (bg/bg) and SCID (scid/scid) genotypes.

LYST PRKDC

2.49e-05217428075241
Pubmed

Down-regulation of Dicer and Ago2 is associated with cell proliferation and apoptosis in prostate cancer.

AGO2 DICER1

2.49e-052174225135428
Pubmed

SCID-bg mice as xenograft recipients.

LYST PRKDC

2.49e-05217429175014
Pubmed

Comparison of susceptibility of inbred and outbred infant mice to Escherichia coli heat-stable enterotoxin STa.

LYST PRKDC

2.49e-05217421639480
Pubmed

Translocation of bacteria from the gastrointestinal tract in immunodeficient mice.

LYST PRKDC

2.49e-05217428709573
Pubmed

Microtubule Minus-End Binding Protein CAMSAP2 and Kinesin-14 Motor KIFC3 Control Dendritic Microtubule Organization.

KIFC3 CAMSAP2

2.49e-052174232084403
Pubmed

Protective immunity to HIV-1 in SCID/beige mice reconstituted with peripheral blood lymphocytes of exposed but uninfected individuals.

LYST PRKDC

2.49e-05217428962121
Pubmed

Ago2 and GW182 expression in mouse preimplantation embryos: a link between microRNA biogenesis and GW182 protein synthesis.

AGO2 DICER1

2.49e-052174220353723
Pubmed

Phosphorylation of Mps1 by BRAFV600E prevents Mps1 degradation and contributes to chromosome instability in melanoma.

TTK BRAF

2.49e-052174222430208
Pubmed

Humanized mouse model of skin inflammation is characterized by disturbed keratinocyte differentiation and influx of IL-17A producing T cells.

LYST PRKDC

2.49e-052174223094018
Pubmed

Cdc6 stability is regulated by the Huwe1 ubiquitin ligase after DNA damage.

HUWE1 CDC6

2.49e-052174217567951
Pubmed

mRNA-Seq whole-transcriptome analysis of a single cell.

AGO2 DICER1

2.49e-052174219349980
Pubmed

Branhamella catarrhalis pathogenesis in SCID and SCID/beige mice. Brief report.

LYST PRKDC

2.49e-05217428267959
Pubmed

The RNA-RNA base pairing potential of human Dicer and Ago2 proteins.

AGO2 DICER1

2.49e-052174231655860
Pubmed

Linkage of loci affecting a murine liver protein and arylsulfatase B to chromosome 13.

AP3B1 ARSB

2.49e-05217424031460
Pubmed

The beneficial effect of blocking Kv1.3 in the psoriasiform SCID mouse model.

LYST PRKDC

2.49e-052174220739949
Pubmed

A commensal Helicobacter sp. of the rodent intestinal flora activates TLR2 and NOD1 responses in epithelial cells.

NOD1 TLR2

2.49e-052174219401779
Pubmed

NOD1 cooperates with TLR2 to enhance T cell receptor-mediated activation in CD8 T cells.

NOD1 TLR2

2.49e-052174222848741
Pubmed

Infection of the laboratory mouse with the intracellular pathogen Ehrlichia chaffeensis.

LYST PRKDC

2.49e-05217429673277
Pubmed

Essential Role for endogenous siRNAs during meiosis in mouse oocytes.

AGO2 DICER1

2.49e-052174225695507
Pubmed

Homozygous scid/scid;beige/beige mice have low levels of spontaneous or neonatal T cell-induced B cell generation.

LYST PRKDC

2.49e-05217428418200
Pubmed

Retinopretectal and accessory optic projections of normal mice and the OKN-defective mutant mice beige, beige-J, and pearl.

AP3B1 LYST

2.49e-05217423584547
Pubmed

Mycobacterium avium subspecies paratuberculosis triggers intestinal pathophysiologic changes in beige/scid mice.

LYST PRKDC

2.49e-052174211924817
Pubmed

Interaction between DNA-dependent protein kinase and a novel protein, KIP.

CIB1 PRKDC

2.49e-05217429372844
Pubmed

Evaluation of three lines of immunodeficient mice for the study of spontaneous metastatic tumors.

LYST PRKDC

2.49e-052174210225324
Pubmed

Defining the membrane proteome of NK cells.

AGO2 LPCAT4 MED14 DOCK10 HUWE1 AP3B1 BIRC6 TTK MELK TUBGCP6 PIK3C2A FURIN EIF4G2 PRKDC LRBA ATP2B1 PCNT RAD21

2.51e-0511681741819946888
Pubmed

Retinoic acid receptors are required for skeletal growth, matrix homeostasis and growth plate function in postnatal mouse.

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

2.81e-0535174419389355
Pubmed

Human Immunodeficiency Virus Type 1 Vpr Mediates Degradation of APC1, a Scaffolding Component of the Anaphase-Promoting Complex/Cyclosome.

AGO2 NCOA4 AP3B1 TTK DICER1 LTN1 LRBA CDC6

3.21e-05242174834011540
Pubmed

USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities.

LRRK2 DOCK10 CFP PRAMEF1 PRAMEF2 PRAMEF13 GSTA3 ZNF182 FAM120C PRAMEF14 TLR2 PLXNA4 VWA3B

3.82e-056741741337196079
Pubmed

Integrative characterization of germ cell-specific genes from mouse spermatocyte UniGene library.

RIMBP3 RIMBP3C RIMBP3B

4.30e-0514174317662146
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

AGO2 MYO9A DOCK10 CHD2 HUWE1 CMSS1 BIRC6 MELK LRRC47 EIF2D PIK3C2A UBE3A RCL1 EIF4G2 LTN1 SMARCC2 AP1G2 PRKDC ATP2B1

5.20e-0513531741929467282
Pubmed

Identification of potential protein interactors of Lrrk2.

AGO2 LRRK2 PRKDC

5.36e-0515174317400507
Pubmed

Mouse screen reveals multiple new genes underlying mouse and human hearing loss.

MYO9A SMARCAL1 FRYL PRAMEF1 PRAMEF2 PRAMEF13 MELK ESCO2 SMYD4 NEK3 ZNF182 PPP2R2B SETD5 PRAMEF14 CRACDL VPS13A SGO2 CDC6

5.55e-0512421741830973865
Pubmed

Cancer exosomes perform cell-independent microRNA biogenesis and promote tumorigenesis.

AGO2 DICER1

7.44e-053174225446899
Pubmed

Dual role of MyD88 in rapid clearance of relapsing fever Borrelia spp.

TLR2 PRKDC

7.44e-053174217030581
Pubmed

TRBP recruits the Dicer complex to Ago2 for microRNA processing and gene silencing.

AGO2 DICER1

7.44e-053174215973356
Pubmed

Rewiring cellular metabolism via the AKT/mTOR pathway contributes to host defence against Mycobacterium tuberculosis in human and murine cells.

NOD1 TLR2

7.44e-053174227624090
Pubmed

Oncogenic B-Raf(V600E) abrogates the AKT/B-Raf/Mps1 interaction in melanoma cells.

TTK BRAF

7.44e-053174223726842
Pubmed

DNA-protein kinase catalytic subunit-interacting protein KIP binds telomerase by interacting with human telomerase reverse transcriptase.

CIB1 PRKDC

7.44e-053174215190070
Pubmed

The proprotein convertase furin is a pro-oncogenic driver in KRAS and BRAF driven colorectal cancer.

BRAF FURIN

7.44e-053174232139876
Pubmed

Expression of the microRNA regulators Drosha, Dicer and Ago2 in non-small cell lung carcinomas.

AGO2 DICER1

7.44e-053174226227789
Pubmed

Developmental and oncogenic radiation effects on neural stem cells and their differentiating progeny in mouse cerebellum.

PRKDC RAD54L

7.44e-053174223897709
Pubmed

Pulmonary alveolar proteinosis. A spontaneous and inducible disease in immunodeficient germ-free mice.

LYST PRKDC

7.44e-05317427717446
Pubmed

Opposite modifying effects of HR and NHEJ deficiency on cancer risk in Ptc1 heterozygous mouse cerebellum.

PRKDC RAD54L

7.44e-053174221602895
Cytoband22q11.21

RIMBP3 ZNF74 RIMBP3C RIMBP3B CCDC116

7.03e-05111175522q11.21
Cytoband1p36.21

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

1.02e-046317541p36.21
CytobandEnsembl 112 genes in cytogenetic band chr9q12

SPATA31A7 SPATA31A5

3.98e-0481752chr9q12
CytobandEnsembl 112 genes in cytogenetic band chrXp11

MED14 CFP TBC1D25 HUWE1 ZNF182 FAM120C SRPX

6.47e-043771757chrXp11
GeneFamilyPRAME family

PRAMEF1 PRAMEF2 PRAMEF13 PRAMEF14

7.93e-0624984686
GeneFamilyWD repeat domain containing|BEACH domain containing

LYST LRBA NSMAF

1.27e-0599831230
GeneFamilyType 1 receptor serine/threonine kinases

ACVR1B BMPR1B

6.00e-047982345
GeneFamilyRing finger proteins|Baculoviral IAP repeat containing|Caspase recruitment domain containing

BIRC8 BIRC6

7.97e-048982419
GeneFamilyMaestro heat like repeat containing

MROH2A MROH5

1.55e-0311982636
GeneFamilyWD repeat domain containing

WDR7 LYST PPP2R2B LRBA DMWD NSMAF

3.03e-03262986362
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

FOXN2 SAMD9 SLF1 PARP8 DOCK10 ZNFX1 CHD2 FRYL PSME1 HUWE1 BIRC6 LYST DICER1 PIKFYVE JAK1 RFTN1 PPP2R2B TRANK1 SETD5 UBE3A TBC1D1 EIF4G2 GLIPR2 LRBA NSMAF RAD21

4.52e-06149217126M40023
CoexpressionFISCHER_DREAM_TARGETS

DCAF15 LIAS SLF1 ZNFX1 CMSS1 BIRC6 TTK MELK CENPQ ESCO2 DDIAS LRR1 MIS12 SEC22C SGO2 PRKDC CDC6 RAD54L PCNT RAD21

5.67e-0696917120M149
CoexpressionGSE17721_0.5H_VS_4H_PAM3CSK4_BMDC_DN

PARP8 LRRK2 BCDIN3D GSTA3 JAK1 BRAF TBC1D1 RCL1 LTN1

7.03e-062001719M4108
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

AGO2 WDR7 FRYL AP3B1 TTK MELK DICER1 PIKFYVE RFTN1 PIK3C2A UBE3A LTN1 VPS13A CAMSAP2 ATP2B1 NSMAF PCNT

4.80e-0585617117M4500
CoexpressionCHEMNITZ_RESPONSE_TO_PROSTAGLANDIN_E2_UP

TTK AFAP1L1 DDIAS RFTN1 SGO2 CDC6 NSMAF

4.82e-051451717M3045
CoexpressionGSE2706_LPS_VS_R848_AND_LPS_8H_STIM_DC_UP

SAMD9 SMARCAL1 SANBR CASP10 TTC7B CRACDL GLIPR2 NSMAF

4.95e-051981718M4727
CoexpressionGSE369_PRE_VS_POST_IL6_INJECTION_IFNG_WT_LIVER_DN

AGO2 MYO9A CHD2 HEATR5A BCDIN3D PIKFYVE JAK1 DMWD

5.31e-052001718M5980
CoexpressionGSE9037_CTRL_VS_LPS_4H_STIM_BMDM_DN

MYO9A PPRC1 PARP8 KBTBD8 CHD2 AP3B1 RFTN1 SETD5

5.31e-052001718M5806
CoexpressionGSE15330_LYMPHOID_MULTIPOTENT_VS_GRANULOCYTE_MONOCYTE_PROGENITOR_IKAROS_KO_DN

TBC1D19 TBC1D1 FURIN GLIPR2 AP1G2 C1S LRBA UNC13A

5.31e-052001718M7049
CoexpressionGSE5589_WT_VS_IL6_KO_LPS_AND_IL10_STIM_MACROPHAGE_45MIN_UP

LRRK2 DOCK10 TTK CENPQ ESCO2 TUBGCP6 TLR2 PCNT

5.31e-052001718M6640
CoexpressionGSE6259_FLT3L_INDUCED_33D1_POS_DC_VS_BCELL_DN

RELCH CHD2 PIKFYVE JAK1 NOD1 KDM4A PRKDC ATP2B1

5.31e-052001718M6745
CoexpressionLU_EZH2_TARGETS_DN

AGO2 ACVR1B DICER1 CENPQ RFTN1 DTWD2 EIF4G2 STAG3L3 SRPX LRBA ATP2B1

6.80e-0540017111M2140
CoexpressionMARSON_BOUND_BY_E2F4_UNSTIMULATED

CMSS1 TTK MELK CENPQ ESCO2 LRR1 MIS12 SETD5 METTL18 SGO2 OSCP1 PRKDC CDC6 RAD54L PCNT

7.31e-0571417115M1744
CoexpressionZENG_GU_ICB_CONTROL_METAGENE_3_PRECICTIVE_ICB_RESPONSE

MYO9A LRRK2 CFP HUWE1 BIRC6 EIF4G2 VPS13A MED12L

7.73e-052111718MM17081
CoexpressionAtlasdev gonad_e13.5_F_MeioticGermCell_Oct_top-relative-expression-ranked_1000

RELCH ACER3 MYO9A KBTBD8 TBC1D25 HUWE1 TTK MELK LYST CENPQ ESCO2 PIKFYVE DDIAS LRR1 NEK3 TRANK1 DTWD2 TAF7L VPS13A MED12L SGO2 ANKRD12 PRKDC LRBA NLRP4 RAD54L

1.37e-0982016726gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_1000
CoexpressionAtlasdev gonad_e13.5_M_GermCell_Oct_top-relative-expression-ranked_1000

RELCH MYO9A PPRC1 KBTBD8 HEATR5A TTK MELK CENPQ ESCO2 DDIAS NEK3 DTWD2 TAF7L RCL1 SGO2 ANKRD12 PRKDC TSACC NLRP4 RAD54L

6.14e-0681016720gudmap_dev gonad_e13.5_M_GermCell_Oct_1000
CoexpressionAtlaskidney_P3_CapMes_Crym_top-relative-expression-ranked_1000

AGO2 KIF26B MROH2A PARP8 ARHGEF12 CMSS1 TTK MELK LYST ESCO2 DDIAS LRR1 RCL1 CLMP ZNF518B GREB1 BMPER RAD54L

2.64e-0574916718gudmap_kidney_P3_CapMes_Crym_1000
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_1000

MROH2A CMSS1 TTK MELK ESCO2 DDIAS LRR1 RCL1 ZNF518B GREB1 RAD54L

4.29e-0531616711gudmap_kidney_P3_CapMes_Crym_k4_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_2500_k-means-cluster#1

TRAF3 SLF1 ACER3 MYO9A ARHGEF12 CHD2 HUWE1 CMSS1 NCOA4 AP3B1 TTK CENPQ PIKFYVE JAK1 ZNF182 SEC22C VPS13A KDM4A

4.47e-0578016718Facebase_RNAseq_e10.5_Lateral Nasal Eminence_2500_K1
CoexpressionAtlasdev gonad_e11.5_M_GonadVasMes_Flk_k-means-cluster#3_top-relative-expression-ranked_1000

MYO9A TTK CENPQ DDIAS TAF7L LTN1 RAD54L

5.42e-051231677gudmap_dev gonad_e11.5_M_GonadVasMes_Flk_k3_1000
CoexpressionAtlasdev gonad_e12.5_F_GermCellOvary_Oct_top-relative-expression-ranked_1000

PPRC1 KBTBD8 TBC1D25 HEATR5A TTK MELK ESCO2 DDIAS LRR1 NEK3 TAF7L RCL1 VPS13A MED12L SGO2 PRKDC NLRP4 RAD54L

8.74e-0582216718gudmap_dev gonad_e12.5_F_GermCellOvary_Oct_1000
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_1000

FOXN2 PPRC1 KBTBD8 LPCAT4 MED14 ARHGEF12 TRIM71 NCOA4 AP3B1 DICER1 LRRC47 BMPR1B SETD5 TBC1D1 KIAA1217 GREB1 LRBA TSACC ATP2B1 PUS7

9.53e-0598316720Facebase_RNAseq_e9.5_Mandibular Arch_1000
CoexpressionAtlasdev gonad_e13.5_F_MeioticGermCell_Oct_k-means-cluster#3_top-relative-expression-ranked_1000

ACER3 MYO9A HUWE1 LYST PIKFYVE TAF7L VPS13A LRBA

1.20e-041871678gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_k3_1000
CoexpressionAtlasDevelopingGonad_e14.5_ ovary_emap-6699_top-relative-expression-ranked_1000

RELCH ACER3 MYO9A KBTBD8 TRIM71 CHD2 HUWE1 BIRC6 ESCO2 LRR1 UBE3A TAF7L VPS13A ANKRD12 GREB1 SEC61A1 TERB2

1.38e-0477616717gudmap_developingGonad_e14.5_ ovary_1000
CoexpressionAtlasdev gonad_e12.5_M_GermCellTestis_Oct_top-relative-expression-ranked_1000

PPRC1 KBTBD8 HEATR5A TTK MELK CENPQ ESCO2 DDIAS LRR1 NEK3 DTWD2 RCL1 SGO2 PRKDC TSACC NLRP4 RAD54L

1.83e-0479516717gudmap_dev gonad_e12.5_M_GermCellTestis_Oct_1000
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_1000_k-means-cluster#2

PPRC1 KBTBD8 LPCAT4 TRIM71 TBC1D1 TSACC ATP2B1 PUS7

1.90e-042001678Facebase_RNAseq_e9.5_Mandibular Arch_1000_K2
CoexpressionAtlasDevelopingKidney_e15.5_stage III -IV renal corpusc_emap-27945_k-means-cluster#4_top-relative-expression-ranked_500

RELCH MED14 PIK3C2A MED12L TRMT13 CAMSAP2

1.93e-041061676gudmap_developingKidney_e15.5_stage III -IV renal corpusc_500_k4
CoexpressionAtlasDevelopingKidney_e15.5_Proximal Tubules_emap-28005_k-means-cluster#3_top-relative-expression-ranked_1000

RELCH HUWE1 PIK3C2A EIF4G2 VPS13A TRMT13 CAMSAP2

2.04e-041521677gudmap_developingKidney_e15.5_Proximal Tubules_1000_k3
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_1000

RELCH KBTBD8 MED14 HUWE1 BIRC6 PIK3C2A KIAA1217 MED12L TRMT13 ZNF518B CAMSAP2

2.14e-0437916711gudmap_developingKidney_e15.5_1000_k3
CoexpressionAtlasdev gonad_e13.5_F_MeioticGermCell_Oct_top-relative-expression-ranked_500

ACER3 MYO9A TTK MELK ESCO2 DDIAS TRANK1 TAF7L VPS13A PRKDC RAD54L

2.44e-0438516711gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_500
CoexpressionAtlasdev gonad_e11.5_F_PrimGermCell_Oct_top-relative-expression-ranked_500

PPRC1 KBTBD8 TBC1D25 TTK MELK ESCO2 DDIAS RCL1 SGO2 NLRP4 RAD54L

2.50e-0438616711gudmap_dev gonad_e11.5_F_PrimGermCell_Oct_500
CoexpressionAtlasDevelopingGonad_e14.5_ ovary_emap-6699_k-means-cluster#1_top-relative-expression-ranked_1000

RELCH ACER3 BIRC6 ESCO2 LRR1 TAF7L VPS13A TERB2

2.65e-042101678gudmap_developingGonad_e14.5_ ovary_1000_k1
CoexpressionAtlasdev gonad_e12.5_M_GermCellTestis_Oct_k-means-cluster#2_top-relative-expression-ranked_1000

HEATR5A TTK MELK CENPQ ESCO2 LRR1 NEK3 DTWD2 RAD54L

2.66e-042661679gudmap_dev gonad_e12.5_M_GermCellTestis_Oct_k2_1000
CoexpressionAtlasdev gonad_e13.5_M_GermCell_Oct_top-relative-expression-ranked_500

MYO9A PPRC1 TTK ESCO2 DDIAS TAF7L SGO2 PRKDC TSACC NLRP4 RAD54L

3.11e-0439616711gudmap_dev gonad_e13.5_M_GermCell_Oct_500
CoexpressionAtlasDevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_500

RELCH MED14 HUWE1 PIK3C2A VPS13A MED12L CAMSAP2

3.13e-041631677gudmap_developingKidney_e15.5_cortic collect duct_500_k4
CoexpressionAtlasdev gonad_e11.5_F_PrimGermCell_Oct_k-means-cluster#2_top-relative-expression-ranked_500

PPRC1 KBTBD8 TTK DDIAS SGO2 NLRP4 RAD54L

3.25e-041641677gudmap_dev gonad_e11.5_F_PrimGermCell_Oct_k2_500
CoexpressionAtlasfacebase_RNAseq_e9.5_MandArch_2500_K3

FOXN2 PPRC1 SMARCAL1 TTK MELK ATF6B DICER1 DHX8 CENPQ TUBGCP6 BMPR1B UBE3A RCL1 PLXNA4 CLMP ZNF518B GREB1 BMPER LRBA PUS7 RAD54L BAHCC1

3.66e-04125916722facebase_RNAseq_e9.5_MandArch_2500_K3
CoexpressionAtlasdev gonad_e12.5_F_GermCellOvary_Oct_top-relative-expression-ranked_500

TBC1D25 TTK MELK ESCO2 DDIAS TAF7L RCL1 SGO2 PRKDC NLRP4 RAD54L

3.83e-0440616711gudmap_dev gonad_e12.5_F_GermCellOvary_Oct_500
ToppCellTCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1|TCGA-Pancreas / Sample_Type by Project: Shred V9

MED14 ARHGEF12 HEATR5A NCOA4 BIRC6 TRANK1 PIK3C2A LTN1 ANKRD12

5.54e-08186175903db813598b67b1e08f759758a1c2023396921fa
ToppCellCD8+_Memory_T_cell-CV-7|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster

MON2 WDR7 DOCK10 FRYL HUWE1 BIRC6 LYST PRKDC LRBA

6.96e-0819117599454f642c3621370fa23640b631301346b300950
ToppCellTCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6|TCGA-Prostate / Sample_Type by Project: Shred V9

FOXN2 HEATR5A FRYL HUWE1 BIRC6 ARFGEF3 DTWD2 PIK3C2A PRKDC

7.61e-081931759abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

MON2 RELCH PARP8 CHD2 FRYL BRAF VPS13A ANKRD12 LRBA

9.88e-081991759f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellPND10-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_prolif|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

4.56e-071741758c988471207ba06195bc3e41056435e8c31c20bbe
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_2/Club-like_(AT2/Club-like)-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

LRRK2 TRIM71 ARFGEF3 BMPR1B NKX2-1 KIAA1217 TLR2 LRBA

5.66e-071791758815b959ce8721c5ded70c0ca6e318dafc691746e
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TTK MELK CENPQ ESCO2 DDIAS NEK3 SGO2 RAD21

5.66e-07179175854191c00b29f53b520cd3243b5791daa4a2c72d7
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TTK MELK CENPQ ESCO2 NEK3 MIS12 SGO2 RAD21

5.90e-0718017585e1680088065be14447d5d5465f91f7edd071a1e
ToppCellP15-Endothelial-proliferative_endothelial_cell|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

6.15e-0718117580c5bc1660b8fc1e905ab4230202862de5be46ebd
ToppCellP15-Endothelial-proliferative_endothelial_cell-proliferative_endothelial_cell|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

6.15e-071811758f83565f09dd971c5cad2704a4a86bca0accd955e
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_2/Club-like_(AT2/Club-like)|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

LRRK2 TRIM71 ARFGEF3 BMPR1B NKX2-1 KIAA1217 TLR2 LRBA

7.56e-0718617582ea5ff14861e5f91d0e6a5767c403a24045d715c
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

MON2 DOCK10 CHD2 HUWE1 BIRC6 BRAF ANKRD12 LRBA

8.19e-071881758ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

SLF1 MELK CENPQ ESCO2 DDIAS PRKDC CDC6 RAD54L

1.08e-061951758cec7df321f372d05c94f97d6bb18891a5cc3dec3
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

SLF1 MELK CENPQ ESCO2 DDIAS PRKDC CDC6 RAD54L

1.12e-061961758df366d76ea55f49e349d622effa57c1535df8400
ToppCelldroplet-Thymus-nan-21m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L RAD21

1.16e-061971758a0d463825b62de49466f9fa563405dda4387cfff
ToppCellPBMC-Severe-Myeloid-Classical_Monocyte-Classical_Monocyte-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

LRRK2 CFP DDIAS AASS SGO2 C1S BMPER

1.20e-06137175712caa8ed7cc9e7a0f78c14ad5efe2fc28c3ce9be
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Proliferating-Cycling_Progenitors|6_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 DDIAS LRR1 SGO2 CDC6 RAD54L

1.26e-061991758a99516a5760f49a69b0fe45a9b2316e393252966
ToppCellmild_COVID-19-T/NK_proliferative|mild_COVID-19 / disease group, cell group and cell class (v2)

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

1.26e-061991758df2fcaf01b1b48632f84e7355ef21d20853f0664
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-Proliferating-Cycling_Progenitors_nGenesUnder4k|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

1.26e-0619917582fbf94f7858250088e0f5ce1ff51892730a13ae8
ToppCellMild/Remission-Developping_Plasmablast|World / disease group and sub_cluster of B and Plasma cells(res = 0.5)

TTK MELK ESCO2 OSTC LRR1 SGO2 CDC6 SEC61A1

1.26e-0619917581dda6116de639140c2d6f5012b7ab9ad0f737ae1
ToppCellLPS_IL1RA_TNF-Endothelial-Endothelial-FOXM1|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

TTK MELK ESCO2 DDIAS CDC6 PRSS48 RAD54L RAD21

1.30e-0620017584cfe08878a6981bf7b3567f9e82192d8f060ddde
ToppCellLPS_IL1RA-Endothelial-Endothelial-Gen_Cap|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

SLF1 ARHGEF12 CASP10 BIRC6 PIK3C2A KIAA1217 ZNF518B PCNT

1.30e-062001758dccec522ab0d7fff62ad6273b02aa9022dbbb8eb
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Stem_cells-Neuroepithelial_cell|3m / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

1.30e-0620017582938a029fa0478be561574ace91f95c4a528b2d4
ToppCellBrain_organoid-organoid_Velasco_nature-3_mon-Proliferating|3_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

1.30e-0620017589279415f5e76cb5b4e071c6582ac249b72dd694c
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Stem_cells|3m / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

1.30e-062001758cfe017b4a4d604a553d0a3df9659687f38e9a7af
ToppCellBrain_organoid-organoid_Velasco_nature-3_mon-Proliferating-Cycling|3_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

1.30e-062001758d582385b2dbb25eeba1b22c5d258a8f26a40ef8b
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-Proliferating|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6 RAD54L

1.30e-0620017582154c976f96489d0fa7bfe6ac1cd21edcbefe735
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Proliferating|6_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 DDIAS LRR1 SGO2 CDC6 RAD54L

1.30e-0620017588f9e76048ae6f45218a09a95a2c4b31e8a8937b2
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P5-P5_1|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

TTK MELK ESCO2 DDIAS LRR1 SGO2 CDC6

3.52e-0616117570dd1401b4c990d49fccb702a9f9867590a58e203
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P5-P5_1-Mitotic.MkI67_(Mitotic.MkI67)-|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

TTK MELK ESCO2 DDIAS LRR1 SGO2 CDC6

3.52e-061611757b6a31c033edc74f23a20aab1f18e80cc83ffee4c
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P5|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

TTK MELK ESCO2 DDIAS LRR1 SGO2 CDC6

3.52e-061611757efb811dda4d73107983a5f68302bdcf4f408d5b4
ToppCellGlobus_pallidus-Macroglia-POLYDENDROCYTE-P5-P5_1-Mitotic.MkI67_(Mitotic.MkI67)|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

TTK MELK ESCO2 DDIAS LRR1 SGO2 CDC6

3.52e-06161175728d5dbd20c9f8e0069f172d552997a044790e1a7
ToppCellPND10-Epithelial-Epithelial_Airway-Neurosecretory-Secretory-Secretory_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TTK MELK GSTA3 ESCO2 PPP2R2B ARSB SGO2

4.48e-061671757a90f905ef38437752e2b0b71bd0322a184de1861
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling-Cycling_Distal_Convoluted_Tubule_Cell_S-high|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

MELK ESCO2 DDIAS MED12L CDC6 PGBD5 RAD54L

4.84e-061691757e7514956b2e4298222ec443f98b2f5289451786e
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

TTK MELK ESCO2 MED12L SGO2 CDC6 RAD54L

7.33e-061801757401df9cddcbca1eb8f0d2687bcacd98e95dc1493
ToppCellP28-Endothelial-proliferative_endothelial_cell-proliferative_endothelial_cell|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 RAD54L

7.59e-061811757e482fd116c00ff4d8db7be3c06b1bd1ffa2d479d
ToppCellP28-Endothelial-proliferative_endothelial_cell|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 RAD54L

7.59e-0618117572be3d44619adb25d339e7a27b500a56e07e8de01
ToppCellIIH-cycling-|IIH / Condition, Cell_class and T cell subcluster

TTK MELK ESCO2 SGO2 BMPER CDC6 RAD54L

7.59e-0618117577f4fed9e296bc22cb5a1e6c8e3c4b641e97c3078
ToppCellIIH-cycling|IIH / Condition, Cell_class and T cell subcluster

TTK MELK ESCO2 SGO2 BMPER CDC6 RAD54L

7.59e-061811757ec3e782ce93dcfe1a54fb7284e4e39063614b0e2
ToppCellTCGA-Liver-Primary_Tumor-Hepatocellular_Carcinoma-Hepatocellular_Carcinoma-5|TCGA-Liver / Sample_Type by Project: Shred V9

TTK MELK ESCO2 DDIAS SGO2 CDC6 RAD54L

8.16e-061831757f604a8b62c7088fad8365dbf8d910fc980bd3ba8
ToppCell343B-Epithelial_cells-Epithelial-J_(AT1-AT2_progenitors)|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

MELK ESCO2 DDIAS MED12L SGO2 CDC6 RAD54L

8.45e-0618417576b2449ac65a2322aa0479fba0d89828f243aabbe
ToppCell343B-Epithelial_cells-Epithelial-J_(AT1-AT2_progenitors)-|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

MELK ESCO2 DDIAS MED12L SGO2 CDC6 RAD54L

8.45e-061841757e90622b82fa7f16a1faaf7a4724c958f2d83341d
ToppCellCV-Moderate-7|Moderate / Virus stimulation, Condition and Cluster

MON2 DOCK10 FRYL HUWE1 BIRC6 PRKDC LRBA

8.76e-061851757a6c9203ce6c2892a4a369c9bcfb85720f01cbb3f
ToppCellCV-Moderate-7|CV / Virus stimulation, Condition and Cluster

MON2 DOCK10 FRYL HUWE1 BIRC6 PRKDC LRBA

9.07e-0618617578571956890fc9894d766ba294a28e376b4aba428
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Immune-Myeloid-Macrophage_Dendritic-Cycling_Mononuclear_Phagocyte|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK10 TTK MELK CENPQ DDIAS TLR2 SGO2

9.39e-06187175773931a5ea73799095daff100b5f18853c57c74dc
ToppCellMatrixFB-Fibroblast-E_(Early_Fibroblastic_progenitor)|MatrixFB / shred on cell class and cell subclass (v4)

TTK MELK CENPQ ESCO2 MIS12 SGO2 RAD54L

9.73e-061881757b240ea20750ffb825cb5fe41d06c632233406ab6
ToppCellNS-moderate-d_16-33-Epithelial-FOXN4+|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

SANBR TTK MELK CLMN SGO2 RAD54L PCNT

1.04e-051901757250ca4a605c1cccd77d23383e4fe6f91cf3609ba
ToppCelldroplet-Lung-21m-Hematologic-lymphocytic-Proliferating_T_cell-proliferating_T|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.08e-05191175715dbc5a03bfab8931c0fd385b0f25874736ae874
ToppCelldroplet-Lung-21m-Hematologic-lymphocytic-Proliferating_T_cell|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.08e-05191175745c15f5ce4a207ac944bed65d45f06c1657d1a6d
ToppCell10x_3'_v2v3-Neoplastic-Differentiated-like-AC-like-AC-like_Prolif-C|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

MELK ESCO2 DDIAS SGO2 SRPX PRKDC ATP2B1

1.08e-051911757588015d76b68488da6aa6603777682f3d81592bf
ToppCell3'-GW_trimst-2-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-cycling_stromal|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SLF1 MELK ESCO2 SGO2 CDC6 RAD54L RAD21

1.08e-05191175750854384fdaa0efa2e3227659d544ed09ac102f2
ToppCellP07-Mesenchymal-developing_mesenchymal_cell-mesenchymal_proliferating_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 SGO2 RAD54L RAD21

1.12e-0519217575ef79faddb433c09ff36660d8bf7a3af5a67bf1d
ToppCellNS-moderate-d_0-4-Lymphoid|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

FOXN2 KBTBD8 TTK MELK ESCO2 CDC6 RAD54L

1.12e-051921757905217dcfc843d3469e9e71bd33707863b14cc82
ToppCellP07-Endothelial-proliferative_endothelial_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 RAD21

1.15e-0519317571e95ef29357969ee385b4717c0b5a497390ac260
ToppCellControl-NK_CD56bright|Control / Disease condition and Cell class

KIF26B CD300A STARD10 LYST JAK1 FURIN PLXNA4

1.15e-0519317578b1e7a226a6057e1097c1525984127b54e823876
ToppCellPSB-critical-LOC-Epithelial-FOXN4+|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

TTK MELK DDIAS LRR1 SGO2 RAD54L PCNT

1.15e-051931757b7d9c5bed524423e92f01496a9f8fad11b33a3f7
ToppCellP07-Endothelial-proliferative_endothelial_cell-proliferative_endothelial_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 RAD21

1.15e-0519317570f21fb8b35f89f4c1c8109d1a4d3d08a452f9edd
ToppCellP03-Endothelial-proliferative_endothelial_cell|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6

1.19e-05194175722bcfb0f3f73608feb22c0847ab4d34f87aeede0
ToppCellP03-Endothelial-proliferative_endothelial_cell-proliferative_endothelial_cell|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6

1.19e-0519417575e56ce9b9fe0721be3a9e6efe1422599bb867721
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_myocytic-mes_proliferating_SM_(20)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

KIF26B TTK MELK ESCO2 DDIAS CDC6 RAD54L

1.19e-051941757590a9d4f054e6a3685daf752c9354650fcc7d18a
ToppCell367C-Myeloid-Macrophage-FABP4+_Macrophage_proliferating|367C / Donor, Lineage, Cell class and subclass (all cells)

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.19e-051941757a12b64945e10f00aa983678a02586c59badc1570
ToppCellIPF-Multiplet-Multiplet|IPF / Disease state, Lineage and Cell class

ARHGEF12 ARFGEF3 BMPR1B CRACDL KIAA1217 VWA3B DNAI7

1.23e-051951757fce0c29574bb7aab181b9c00feb42681e285d1f2
ToppCellCOVID-19-kidney-Proliferating_T_cell|kidney / Disease (COVID-19 only), tissue and cell type

SLF1 DOCK10 TTK MELK ESCO2 SGO2 RAD54L

1.23e-0519517577e05e56f8d0a7a052830c7db12b10dace7d10760
ToppCellfacs-Thymus-nan-3m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TTK MELK ESCO2 SGO2 CDC6 RAD54L RAD21

1.23e-05195175793c345e70d6c8ff5d12fd63d73228c1700b804a0
ToppCellIPF-Multiplet|IPF / Disease state, Lineage and Cell class

ARHGEF12 ARFGEF3 BMPR1B CRACDL KIAA1217 VWA3B DNAI7

1.23e-051951757eacc0449ae6f3ad8002268cd061467684c6fb9a7
ToppCellCOVID-19-lung-Proliferative_fibroblast|lung / Disease (COVID-19 only), tissue and cell type

KIF26B TTK MELK ESCO2 SGO2 CLMP RAD54L

1.27e-0519617572ce8a787f2731faa913d20342d73041d59468f27
ToppCellCOVID-19-lung-Proliferative_fibroblast|COVID-19 / Disease (COVID-19 only), tissue and cell type

KIF26B TTK MELK ESCO2 SGO2 CLMP RAD54L

1.27e-051961757ca91d5e325875e7444809b80fcbd491d8899ea36
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

TTK MELK ESCO2 DDIAS SGO2 CDC6 RAD54L

1.32e-05197175784ed777cdba569200a3ef1654d8a12f17fcfb7f1
ToppCellproximal-Hematologic-Proliferating_Macrophage|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

TTK MELK CENPQ ESCO2 SGO2 CDC6 RAD54L

1.32e-0519717570b1fa881abbfcc54b322fc27124db3f8947af016
ToppCell3'-Parenchyma_lung-Endothelial-Blood_vessel_EC-vein_endothelial_cell-EC_venous_pulmonary-EC_venous_pulmonary_L.2.2.1.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

TTK MELK ESCO2 SGO2 SRPX CDC6 RAD54L

1.32e-05197175776b61e60a757e58b465569538e632d6d9953e89a
ToppCellproximal-3-Hematologic-Proliferating_Macrophage|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

TTK MELK CENPQ ESCO2 SGO2 CDC6 RAD54L

1.32e-0519717570dd9058aa19d1268ebba9a65555870224b5a5978
ToppCellproximal-Hematologic-Proliferating_Macrophage-3|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

TTK MELK CENPQ ESCO2 SGO2 CDC6 RAD54L

1.32e-0519717579243617b307acf3df40d93c41cd8d4788699a7ea
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P5-P5_1-Sox4-POLYDENDROCYTE_(Neurogenesis.Sox4.Cdc20)|Hippocampus / BrainAtlas - Mouse McCarroll V32

TTK MELK ESCO2 DDIAS LRR1 SGO2

1.33e-051311756f9fb8d74ca720b81fd5910cc975510359a8ef751
ToppCellcycling_basal_cell|World / shred by cell class for bronchial biopsy

TTK MELK ESCO2 DDIAS SGO2 CDC6 RAD21

1.36e-051981757d5306121a75c5eb37d62c353799a98e6ba5ab63f
ToppCellsevere_COVID-19-T/NK_proliferative|severe_COVID-19 / disease group, cell group and cell class (v2)

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.36e-051981757ed86b0247006befe55400c287d334d2202b470bd
ToppCellParenchymal-NucSeq-Epithelial-Epi_airway_basal-Dividing_Basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

PRSS55 MELK ESCO2 DDIAS BMPR1B CDC6 RAD54L

1.36e-051981757d5e125f0c4f41b47d567568d0838adcca7655f6d
ToppCellmild_COVID-19-T/NK_proliferative|World / disease group, cell group and cell class (v2)

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.41e-051991757d44cc74d7171d96add61dae821daf774b17d4c69
ToppCell367C-Myeloid-Dendritic-cDC_proliferating_1|Dendritic / Donor, Lineage, Cell class and subclass (all cells)

TTK MELK ESCO2 SGO2 CDC6 RAD54L RAD21

1.41e-0519917573d876f172487425b37b2f658dae59e0f293ee76e
ToppCellVE-cycling|VE / Condition, Cell_class and T cell subcluster

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.41e-05199175747c47ebc318a0b98841ca2656837bbd068899559
ToppCelltumor_Lung-T/NK_cells-Undetermined|tumor_Lung / Location, Cell class and cell subclass

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.41e-0519917572e222e2e080bc2be63d0fdf285e1790676b911ef
ToppCellnormal_Lung-T/NK_cells-Undetermined|T/NK_cells / Location, Cell class and cell subclass

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.41e-0519917574142d5b1b20212508f95841fdac4efb7655616cb
ToppCellNS-critical-d_16-33-Lymphoid-NKT-proliferating|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

TTK MELK ESCO2 RFTN1 LRR1 SGO2 CDC6

1.41e-05199175731b144bb209c629e12156f4d9c9cec79baffffb9
ToppCellCOVID-19-Lymphoid-Proliferating_CD4_T_cells|COVID-19 / Condition, Lineage and Cell class

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.41e-051991757e1dfc856a85a91e8f7ab8d600a8a891d16b2aefb
ToppCellMild/Remission-Developping_Plasmablast|Mild/Remission / disease group and sub_cluster of B and Plasma cells(res = 0.5)

TTK MELK ESCO2 LRR1 SGO2 CDC6 SEC61A1

1.41e-05199175758c772ec763109a4009f52424fbb214fc23d0c09
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Proliferating-cycling_ventral_progenitors|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.41e-051991757446cd7d960812519fe2b8e434578ef0b668c75ce
ToppCellVE-cycling-|VE / Condition, Cell_class and T cell subcluster

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.41e-051991757c0a67149a19b65b3069dbc5261d81f658e6e39a2
ToppCell5'-GW_trimst-2-SmallIntestine-Mesenchymal-immature_mesenchymal_cell-cycling_stromal|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

TTK MELK ESCO2 SGO2 CDC6 RAD54L RAD21

1.45e-05200175714c9ced92763858f3d35186cd3908bd0f4cfd872
ToppCellControl_saline-Endothelial-Endothelial-FOXM1|Control_saline / Treatment groups by lineage, cell group, cell type

TTK MELK ESCO2 DDIAS CDC6 RAD54L RAD21

1.45e-0520017579bbc7b5561151f6ff65f40b3226271def732e5d9
ToppCellBrain_organoid-organoid_Tanaka_cellReport-5w-Stem_cells-Neuroepithelial_cell|5w / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.45e-052001757c865efaaaecccbf9c833d6c1cbe85809a3ec306d
ToppCell(5)_Epi_dividing|World / Oesophagus cell shreds on cell class (v1) and cell subclass (v1)

CMSS1 TTK MELK ESCO2 LRR1 SGO2 CDC6

1.45e-052001757948c55aa1c25f8a69b1bd3ef53fd32aa222f592c
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Proliferating-Cycling_Progenitors_nGenesUnder4k|6_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.45e-0520017578223d2c9b9e05b1d26e3de1bc0226d175af2e7b2
ToppCellmLN-T_cell-cycling_gd_T|mLN / Region, Cell class and subclass

KIF26B PGBD1 TTK MELK ESCO2 CDC6 RAD54L

1.45e-0520017574efeef51f885ee8f6dd3911a536cc49e3c14da98
ToppCell(5)_Epithelial_cells-(5)_Epi_dividing|(5)_Epithelial_cells / Oesophagus cell shreds on cell class (v1) and cell subclass (v1)

CMSS1 TTK MELK ESCO2 LRR1 SGO2 CDC6

1.45e-052001757b46b2064362efc64edf19ab2b21bc89047c9d943
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-1_mon-Proliferating|1_mon / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 RAD21

1.45e-052001757762442d125e594fede4506b72da15563b1d8798a
ToppCellmLN-(1)_T_cell-(18)_cycling_gd_T|mLN / shred on region, Cell_type, and subtype

KIF26B PGBD1 TTK MELK ESCO2 CDC6 RAD54L

1.45e-052001757e8a0a88a8344e80783931115bbe6cd5b62a4c1f7
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Proliferating-cycling_ventral_progenitors|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.45e-0520017579359faa749f41aaef70b4874f20b4eed2dc12cc2
ToppCellBrain_organoid-organoid_Tanaka_cellReport-5w-Stem_cells|5w / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.45e-0520017572ee167b8bddd11fd5b1f61f87fcdf757aee3193e
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW26-Stem_cells-Neuroepithelial_cell|GW26 / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6

1.45e-052001757203b9a5de4430713da01b3331e69381db449a3a0
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW26-Stem_cells|GW26 / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK CENPQ ESCO2 LRR1 SGO2 CDC6

1.45e-052001757a854e19703dc920e48304541e2b06ed013292f3e
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Proliferating|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

TTK MELK ESCO2 LRR1 SGO2 CDC6 RAD54L

1.45e-052001757cea58274efbe7f9e3c3ef9fbb768ebfb917e21d9
DrugA-Cw

LYST PIK3C2A TLR2 LRBA

1.35e-06121684CID013891726
DrugBepridil hydrochloride [74764-40-2]; Down 200; 10uM; MCF7; HT_HG-U133A

DCAF15 PPP2R2B ARSB CLMN VPS13A ZNF74 SRPX CAPN5 PGBD5 BAHCC1

1.87e-06194168105674_DN
Drugbiflorin

MELK BRAF RAD54L

3.90e-0651683ctd:C522781
Diseasehemorrhoid

LIAS BIRC6 BMPR1B KIAA1217 CLMP SRPX

1.45e-041471586EFO_0009552
DiseaseChediak-Higashi syndrome (implicated_via_orthology)

LYST NSMAF

1.70e-0441582DOID:2935 (implicated_via_orthology)
DiseaseLymphoma, Non-Hodgkin, Familial

CASP10 BRAF RAD54L

2.15e-04221583C4721532
Diseasechoreatic disease (is_implicated_in)

NKX2-1 VPS13A

2.82e-0451582DOID:12859 (is_implicated_in)
DiseaseLYMPHOMA, NON-HODGKIN, FAMILIAL

CASP10 RAD54L

2.82e-0451582605027
DiseaseLymphoma, non-Hodgkin, familial

CASP10 RAD54L

2.82e-0451582cv:C4721532
DiseaseNon-Hodgkin lymphoma

CASP10 RAD54L

2.82e-0451582cv:C0024305
Diseasemean arterial pressure

TBC1D19 WDR7 DOCK10 ARHGEF12 ASB15 KIAA1217 FURIN LRBA ATP2B1 BAHCC1

3.76e-0449915810EFO_0006340
DiseaseLymphoma, Non-Hodgkin

CASP10 BRAF RAD54L

6.67e-04321583C0024305
DiseaseCMRF35-like molecule 6 measurement

CD300A ATP2B1

7.81e-0481582EFO_0008086
DiseaseCornelia De Lange Syndrome

SETD5 RAD21

7.81e-0481582C0270972
Diseasethyroid gland papillary carcinoma (is_implicated_in)

BRAF NKX2-1

1.25e-03101582DOID:3969 (is_implicated_in)
DiseaseThyroid carcinoma

NCOA4 DICER1 BRAF

1.70e-03441583C0549473
DiseaseN-acetylputrescine measurement

TUBGCP6 EIF4G2

1.82e-03121582EFO_0800127
Diseasebrain disease (is_implicated_in)

TRAF3 PPP2R2B

1.82e-03121582DOID:936 (is_implicated_in)
Diseaseplatelet storage pool deficiency (implicated_via_orthology)

AP3B1 LYST

2.86e-03151582DOID:2223 (implicated_via_orthology)
DiseaseMetastatic melanoma

BMPR1B DYRK1B PRKDC

3.06e-03541583C0278883
DiseaseAbnormal behavior

MED12L PUS7

3.25e-03161582C0233514
DiseaseBenign neoplasm of stomach

CASP10 BRAF

3.68e-03171582C0153943
DiseaseNeoplasm of uncertain or unknown behavior of stomach

CASP10 BRAF

3.68e-03171582C0496905
DiseaseCarcinoma in situ of stomach

CASP10 BRAF

3.68e-03171582C0154060
Diseasenon-Hodgkin lymphoma (is_implicated_in)

CASP10 RAD54L

3.68e-03171582DOID:0060060 (is_implicated_in)
Diseaseandrostenedione measurement, estrone measurement

BMPER PGBD5

4.12e-03181582EFO_0007970, EFO_0007972
Diseaseserum IgG measurement

TRAF3 UNC13A

4.12e-03181582EFO_0004565
DiseaseMyeloid Leukemia

AGO2 RAD21

4.12e-03181582C0023470
DiseaseLeukemia, Monocytic, Chronic

AGO2 RAD21

4.12e-03181582C0023466
Diseasecolorectal cancer (is_implicated_in)

DICER1 JAK1 BRAF TLR2

4.14e-031211584DOID:9256 (is_implicated_in)
Diseaseneuropsychological test

FER1L6 PPP2R2B KIAA1217 CAPN5 NSMAF

4.26e-031971585EFO_0003926
DiseaseHETE measurement

FER1L6 SEC22C UNC13A

4.52e-03621583EFO_0801166
DiseaseChronic myeloproliferative disorder

CDC6 PCNT

4.59e-03191582C1292778
Diseasethrombin activatable fibrinolysis inhibitor activation peptide measurement

KBTBD8 DOCK10

4.59e-03191582EFO_0008582
Diseasemaximal midexpiratory flow rate

TUBGCP6 MED12L

5.08e-03201582EFO_0004313

Protein segments in the cluster

PeptideGeneStartEntry
EIIKKLECPDPQIVG

UNC13A

1201

Q9UPW8
QAPTQLLEPLKKVEC

nan

166

Q6ZRG5
LLEPLKKVECSPVQQ

nan

171

Q6ZRG5
CESLRNFRKKVPPII

ACER3

196

Q9NUN7
CLKKKRDERPLFPQI

BRAF

696

P15056
NSKPRAILKPRKVCV

PPP2R2B

381

Q00005
KTKPVCPLKAAIDRL

BAHCC1

1421

Q9P281
PIVKKGRICPIDITL

EIF2D

481

P41214
CSARVQLPKKPLVPE

CCDC116

21

Q8IYX3
RLLQQCETLKVPPKK

CENPQ

116

Q7L2Z9
TAQLREELLKLPCPE

BIRC6

4801

Q9NR09
AKIQPKNPECLLERE

C2orf78

516

A6NCI8
KKCGIRFQPPAIILI

CEP19

6

Q96LK0
VRTCIPKVELVPAGK

ACVR1B

66

P36896
IDPVLVKRAEKECPF

BCDIN3D

111

Q7Z5W3
PPKIRASCLKELLQE

FAM47DP

191

A6NHR8
ACLILGVKRPPEEKL

AASS

86

Q9UDR5
CRDLAPEVEKLLLQP

AP1G2

136

O75843
LQKLCQPASVEKLPL

ASB15

551

Q8WXK1
QPKECFLIQPKERKE

CMSS1

51

Q9BQ75
KPEDEVLICIQQRPK

CAPN5

396

O15484
KNLLRLACTLKPDPE

ADCY10

246

Q96PN6
IEEKRKLLCSVIPQA

ANKRD12

1846

Q6UB98
LPVIKRTDREKALCP

DICER1

1591

Q9UPY3
KVLRTVPLLAACLPQ

DTWD2

106

Q8NBA8
REIVCIKKLRPSFPN

BMPR1B

441

O00238
RIHEVPLLEPLVCKK

DMWD

586

Q09019
PLLEPLVCKKIAQER

DMWD

591

Q09019
KPENILLCNPKRSAI

DYRK1B

241

Q9Y463
VRPEVPDAIKKCQRA

ATP2B1

686

P20020
IKPEKCPRRVNREIV

AGO2

61

Q9UKV8
EVPLQLPTVKILCQR

C1orf87

226

Q8N0U7
EVLLGLKPCEIKRQE

ARHGEF12

776

Q9NZN5
LKPCEIKRQEVINEL

ARHGEF12

781

Q9NZN5
NCERVPKIAPDVLRK

AP3B1

506

O00203
RRVAVPVLVKDGKPC

NKX2-1

256

P43699
CPVRKVLKPIQLTDP

RCL1

171

Q9Y2P8
RVPFLVLECPNLKLK

OSTC

6

Q9NRP0
NICQLIPELELLPEK

RAD21

511

O60216
LRQSPECKPEIDKAV

RAD54L

201

Q92698
IVFLQRPCLPQKIKK

RFTN1

426

Q14699
PRKEPCQEKAALERV

RIMBP3B

1336

A6NNM3
PRKEPCQEKAALERV

RIMBP3C

1336

A6NJZ7
LVKCLAPIRDPKTEQ

JAK1

166

P23458
LLSPLRKKPLEDLVC

LTN1

581

O94822
RNQCLKETPIKIPVN

MELK

471

Q14680
CLPHIVPNVLLAKRE

RELCH

526

Q9P260
KLLNRPCPAAVKSEE

PARP8

361

Q8N3A8
PLKLRCPVCDQKVVL

TRIM71

86

Q2Q1W2
VRQLLPLPKQTCDVI

MED12L

1621

Q86YW9
IVLLPCDLPKVVSRA

LPCAT4

136

Q643R3
PDNLLKICKAKPVIF

GREB1

371

Q4ZG55
VRLKEPPVDICLSKA

LRR1

81

Q96L50
ELKIDIIPNPRECIL

HSP90AB4P

46

Q58FF6
EIPAELADCPKLKEI

LRRC47

216

Q8N1G4
APPCLLRAVNKVKDT

KIF26B

431

Q2KJY2
PLLAVQEALKKCFPV

C1orf109

6

Q9NX04
ILLLPLCRPEEKDAK

GSTA3

106

Q16772
KLPEDCPQLLRVDKI

PLXNA4

696

Q9HCM2
CPQLLRVDKILVPVE

PLXNA4

701

Q9HCM2
CRLPLKPSLVAKELN

PIK3C2A

1091

O00443
LVSELCAVLKPRLQP

PEX6

441

Q13608
KAKALVACQIVLPDP

DDIAS

156

Q8IXT1
KPKIDLFRTCIAAIP

FRYL

551

O94915
CPTQPDKVRKILDLV

NOD1

61

Q9Y239
VDVSKIPLPRFKLKC

KDM4A

816

O75164
LRTLEGPENCLKPKL

LRBA

2731

P50851
KLKEIPPEIGCLENL

LRRK2

1256

Q5S007
KERNPKILVECLTPD

LIAS

201

O43766
EPDVKRCRKPKVTQL

METTL18

246

O95568
APQPVLVKECELVKD

TUBGCP6

341

Q96RT7
LIAIKPVCPKELRDQ

NLRP4

276

Q96MN2
KLVVEEKRPCLHVPA

CFP

446

P27918
LKERVCPLVIKLFSP

MON2

271

Q7Z3U7
KDPRILVTHCLVPKN

GARIN1B

206

Q96KD3
LDQCPKLEVDIPLVK

EIF4G2

626

P78344
LCRKECPFVIKPKIQ

HUWE1

466

Q7Z6Z7
LQPVLVTLKDAPLCK

PCNT

2001

O95613
ERSLTVLPKEEKCPL

CRACDL

716

Q6NV74
IVARLVQKCLPPEII

NEK3

256

P51956
KLCKPPNDLREVGIL

KBTBD8

316

Q8NFY9
AIRLLKIPPCKGITE

MED14

681

O60244
LCPRKEVIEQTKAPK

NCOA4

461

Q13772
VIIKRKSGEIPCPLA

PGBD5

426

Q8N414
RLLEVCVPLPKIFIK

PIKFYVE

1386

Q9Y2I7
CVCILVRQLPELNPK

HEATR5A

1686

Q86XA9
PVPELCQGTVKVKLR

BMPER

541

Q8N8U9
KTDNCEKIPRPLSLI

DOCK10

1306

Q96BY6
PEEPLRRLQEEKLCK

BIRC8

176

Q96P09
VPPLKLCKNLNREAQ

GLIPR2

26

Q9H4G4
KTIPTRECKALKQRP

CHD2

451

O14647
RVCFVPKDPLDLLKE

FRMPD1

261

Q5SYB0
KLAPCRSLIKEEQPP

FRMPD1

546

Q5SYB0
PQRKCIIDILTEPKD

FURIN

446

P09958
TIVKIPPHVLREKCL

ARFGEF3

36

Q5TH69
EKRCPGAVVPVDLLK

FAM120C

11

Q9NX05
RLPVAPLRKCKEVKV

C1S

586

P09871
LIEKLKFILLETPPC

DNAI7

141

Q6TDU7
ILPRLQAREKCKPQL

CDC6

326

Q99741
LKIRICLEKQPDPFA

LYST

361

Q99698
ATRQVPKCLVLEEKL

ESCO2

256

Q56NI9
CVPLDEKLLPQLLKE

ARSB

121

P15848
IEQGILECEKPLPLK

FOXN2

251

P32314
SQPIIKIPLRDCIKI

NSMAF

71

Q92636
EDLCKTVVPKLLRNI

CASP10

171

Q92851
CSLEKIQEELKLQPP

SEC22C

136

Q9BRL7
CLLKPREVVEPVVPK

PPRC1

426

Q5VV67
CNEKIVVLLQRLKPE

PSME1

106

Q06323
KEQTLLKQLPCIPLV

CAMSAP2

231

Q08AD1
LKQLPCIPLVENLLK

CAMSAP2

236

Q08AD1
KLPPRVCVSLKNIVD

DCAF15

56

Q66K64
EKEKLKELFPVLCQP

DHX8

111

Q14562
PLKVFIDICLKEIPQ

PRAMEF13

146

Q5VWM6
LCKLRPPIDLERKSQ

MROH5

481

Q6ZUA9
RKVLLEKCLGPLREP

MROH2A

1426

A6NES4
LPILIRECSDVQPKL

NDUFA2

51

O43678
KQFLCKLREPLAPIT

FER1L6

1086

Q2WGJ9
PPKSEAVKEECRLLN

GAREM2

471

Q75VX8
DVPLAAKLVDLPCVI

TAF7L

146

Q5H9L4
CLNKIPVLREEKLPV

TRMT13

246

Q9NUP7
PLKGRCLVATKDILP

SMYD4

241

Q8IYR2
CPKPLKNRDVITLRS

STARD10

121

Q9Y365
VRVRVKKCESFLPPE

TBC1D25

36

Q3MII6
EACEIPVEVKPKARL

NPHP3

26

Q7Z494
PLKVFIDICLKEIPQ

PRAMEF14

146

Q5SWL7
PRKEPCQEKAALERV

RIMBP3

1336

Q9UFD9
LPLRVLKPIQCFKLE

SPATA31A6

811

Q5VVP1
KKCIREPRFVEVLLP

SAMD9

281

Q5K651
LGKEPQEKLEIRLCP

KIFC3

586

Q9BVG8
PLRVLKPIQCFKLEK

SPATA31A7

816

Q8IWB4
KLIAKVRCLPQVQLD

SMARCAL1

381

Q9NZC9
PTAALRKLPVKRCVE

PUS7

431

Q96PZ0
VCLDKKPVIIIFDEP

KIAA1217

1436

Q5T5P2
KAEKQECPVECPLRI

SETD5

711

Q9C0A6
KKPRLNVCQKSEIIP

SGO2

806

Q562F6
PLKVFIDICLKEIPQ

PRAMEF1

146

O95521
LRKLPKVTCRDVLPE

STAG3L1

6

P0CL83
QFLTILPKELQPCVK

PGBD1

91

Q96JS3
PLKVFIDICLKEIPQ

PRAMEF2

146

O60811
RIKCPSVKERIAEPN

SRPX

181

P78539
QVLLCPRPKDVLLVT

OSCP1

111

Q8WVF1
KETERRIPCIPGKIN

SANBR

336

Q6NSI8
NIFLCPEIEPKLLGK

SMARCC2

141

Q8TAQ2
PVKEDRKLCERPLAS

AKAP3

621

O75969
VPRSPVLLCKLDLDK

AFAP1L1

326

Q8TED9
SCPPEVDAKLLKRQQ

ATF6B

316

Q99941
RPPQIFLCDKIVETK

CD300A

51

Q9UGN4
LEKCNPPLEVKDLFV

CLMN

46

Q96JQ2
LKVLVRPSKPKCELE

CLMP

126

Q9H6B4
LPELKANPFKERICR

CIB1

61

Q99828
KVPAKEEANAVPLCR

TSACC

11

Q96A04
CKHPRELREKIPVKQ

XIRP2

3216

A4UGR9
ELREKIPVKQPRICS

XIRP2

3221

A4UGR9
PLRVLKPIQCFKLEK

SPATA31A3

816

Q5VYP0
LPCVRPDCKEKVLRK

TRAF3

146

Q13114
LPQEQKAQIREKPCE

ZNF880

171

Q6PDB4
TKPNLILKLEVEECP

ZNF182

71

P17025
KDLQVRACPFLPVKR

VPS13A

1601

Q96RL7
ELGVKTLDCRKPLIP

UBE3A

431

Q05086
LPLEKTCKDRLVPLK

TIAM2

1466

Q8IVF5
TCKDRLVPLKNRVPV

TIAM2

1471

Q8IVF5
LRIPSNILLPEDKCK

MIS12

91

Q9H081
PLRVLKPIQCFKLEK

SPATA31A1

816

Q5TZJ5
PLRVLKPIQCFKLEK

SPATA31A5

816

Q5VU36
PFCVILPEIQKPERK

SEC61A1

11

P61619
FILPPACLQKEIRRK

TERB2

86

Q8NHR7
RKEPVTKQVRLCVSP

TBC1D1

56

Q86TI0
LRKLPKVTCRDVLPE

STAG3L2

6

P0CL84
LPHILKELPENLKVC

SLF1

1021

Q9BQI6
AVREPKLPVLAGCLK

PRKDC

211

P78527
FLPALEPVIKEDKIC

PRSS48

191

Q7RTY5
IKLDDLKVPICLPTQ

PRSS55

166

Q6UWB4
LKVCPICQVPIRKNL

ZNFX1

1616

Q9P2E3
CKTVEKPLILPVRFE

ZNF844

366

Q08AG5
KECIRLKPDDATIPL

TTC7B

421

Q86TV6
CLKRDPKQRISIPEL

TTK

771

P33981
IDALDVAKLLCVVPP

ZNF74

616

Q16587
LRKLPKVTCRDVLPE

STAG3L3

6

P0CL85
LRQVQCKPLLESQKP

TTC37

1366

Q6PGP7
KELLLQRALEIPCPV

VWA3B

251

Q502W6
NVLIKRCKEPLIPSI

TRANK1

2391

O15050
QVPLKVKDIPELKEC

TBC1D19

186

Q8N5T2
LLEPIEKKAIPQRFC

TLR2

736

O60603
LDRKDKELLICPPVT

WDR7

316

Q9Y4E6
IAAKPDQLIKCPRRN

ZNF518B

926

Q9C0D4
KTIEKPRIGECLVAP

MYO9A

1531

B2RTY4