Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	transcription coregulator activity	HDAC4 PSIP1 TLE4 ARID5B MED12L NUCKS1 MED13L THRAP3 EP300 TP53BP1	3.22e-05	562	72	10	GO:0003712
GeneOntologyMolecularFunction	dATP binding	ST13P5 ST13	1.27e-04	5	72	2	GO:0032564
GeneOntologyMolecularFunction	adenyl deoxyribonucleotide binding	ST13P5 ST13	1.91e-04	6	72	2	GO:0032558
GeneOntologyMolecularFunction	purine deoxyribonucleotide binding	ST13P5 ST13	2.66e-04	7	72	2	GO:0032554
GeneOntologyMolecularFunction	chromatin binding	HDAC4 PSIP1 ATRX TLE4 NUCKS1 ADNP EP300 HP1BP3 HDAC2 POLR3G	3.06e-04	739	72	10	GO:0003682
GeneOntologyMolecularFunction	transcription factor binding	HDAC4 PSIP1 TLE4 PCLO MED12L NUCKS1 THRAP3 EP300 TP53BP1 HDAC2	3.55e-04	753	72	10	GO:0008134
GeneOntologyMolecularFunction	deoxyribonucleotide binding	ST13P5 ST13	4.54e-04	9	72	2	GO:0032552
GeneOntologyMolecularFunction	structural constituent of synapse	NEFH PCLO SPTBN2	4.66e-04	42	72	3	GO:0098918
GeneOntologyMolecularFunction	transcription coactivator activity	PSIP1 ARID5B MED12L NUCKS1 THRAP3 EP300	7.84e-04	303	72	6	GO:0003713
GeneOntologyMolecularFunction	protein-macromolecule adaptor activity	NEFH HDAC4 PSIP1 TLE4 ARID5B MED12L NUCKS1 MED13L ST13 THRAP3 EP300 TP53BP1	8.42e-04	1160	72	12	GO:0030674
GeneOntologyMolecularFunction	DNA-binding transcription factor binding	HDAC4 PSIP1 TLE4 NUCKS1 THRAP3 EP300 TP53BP1 HDAC2	1.15e-03	582	72	8	GO:0140297
GeneOntologyMolecularFunction	structural constituent of cytoskeleton	CYLC1 CYLC2 NEFH SPTBN2	1.25e-03	130	72	4	GO:0005200
GeneOntologyMolecularFunction	helicase activity	ATRX DDX18 CHD9 MTREX	2.56e-03	158	72	4	GO:0004386
GeneOntologyMolecularFunction	histone binding	HDAC4 ATRX PHIP TP53BP1 HDAC2	2.69e-03	265	72	5	GO:0042393
GeneOntologyMolecularFunction	molecular adaptor activity	NEFH HDAC4 PSIP1 TLE4 ARID5B MED12L NUCKS1 MED13L ST13 THRAP3 EP300 TP53BP1	3.15e-03	1356	72	12	GO:0060090
GeneOntologyMolecularFunction	promoter-specific chromatin binding	HDAC4 EP300 HDAC2	3.36e-03	83	72	3	GO:1990841
GeneOntologyMolecularFunction	histone deacetylase activity	HDAC4 HDAC2	3.36e-03	24	72	2	GO:0004407
GeneOntologyMolecularFunction	protein lysine deacetylase activity	HDAC4 HDAC2	3.65e-03	25	72	2	GO:0033558
GeneOntologyBiologicalProcess	positive regulation of male mating behavior	HDAC4 HDAC2	1.17e-05	2	71	2	GO:1902437
GeneOntologyBiologicalProcess	regulation of male mating behavior	HDAC4 HDAC2	3.50e-05	3	71	2	GO:1902435
GeneOntologyCellularComponent	cytoskeletal calyx	CYLC1 CYLC2	3.50e-05	3	72	2	GO:0033150
GeneOntologyCellularComponent	perinuclear theca	CYLC1 CYLC2	1.16e-04	5	72	2	GO:0033011
GeneOntologyCellularComponent	nuclear body	CASC3 UBE2O HDAC4 ATRX SLTM MTREX THOC2 THRAP3 TP53BP1 HP1BP3 POLR3G	2.49e-04	903	72	11	GO:0016604
GeneOntologyCellularComponent	mediator complex	MED12L MED13L THRAP3	2.80e-04	37	72	3	GO:0016592
GeneOntologyCellularComponent	chromosome, telomeric region	ATRX PINX1 THOC2 TP53BP1 HDAC2	3.54e-04	176	72	5	GO:0000781
GeneOntologyCellularComponent	paranodal junction	SPTBN2 NFASC	6.31e-04	11	72	2	GO:0033010
HumanPheno	Aggressive behavior	WASHC4 HDAC4 ATRX MED12L NFASC MED13L ADNP THOC2 PHIP EP300	7.55e-06	516	20	10	HP:0000718
HumanPheno	Abnormal aggressive, impulsive or violent behavior	WASHC4 HDAC4 ATRX MED12L NFASC MED13L ADNP THOC2 PHIP EP300	7.55e-06	516	20	10	HP:0006919
HumanPheno	Maladaptive fear-related cognitions	NEFH ATRX MATR3 MED12L NFASC ADNP THOC2 PHIP EP300	3.72e-05	483	20	9	HP:5200230
HumanPheno	Anxiety	NEFH ATRX MATR3 MED12L NFASC ADNP THOC2 PHIP EP300	3.72e-05	483	20	9	HP:0000739
HumanPheno	Abnormal judgment	NEFH ATRX MATR3 MED12L NFASC ADNP THOC2 PHIP EP300	6.32e-05	516	20	9	HP:5200401
HumanPheno	Abnormal fear-induced behavior	NEFH ATRX MATR3 MED12L NFASC ADNP THOC2 PHIP EP300	8.81e-05	538	20	9	HP:0100852
HumanPheno	Abnormal calvaria morphology	HDAC4 ATRX PPFIBP1 KLHL40 PCLO MED12L NFASC HERC1 MED13L ADNP THOC2 PHIP EP300	1.50e-04	1254	20	13	HP:0002683
HumanPheno	Upslanted palpebral fissure	HDAC4 ATRX HERC1 MED13L ADNP PHIP EP300	1.77e-04	333	20	7	HP:0000582
HumanPheno	Abnormal social development	WASHC4 HDAC4 ATRX MED12L NFASC HERC1 MED13L ADNP THOC2 PHIP EP300	1.90e-04	908	20	11	HP:0025732
HumanPheno	Truncal obesity	ATRX ADNP THOC2 EP300	2.48e-04	82	20	4	HP:0001956
HumanPheno	Frontal upsweep of hair	HDAC4 MED13L EP300	2.62e-04	33	20	3	HP:0002236
HumanPheno	Aspiration	MATR3 ADNP EP300	2.87e-04	34	20	3	HP:0002835
HumanPheno	Impairment in personality functioning	NEFH WASHC4 HDAC4 ATRX MATR3 MED12L NFASC MED13L ADNP THOC2 PHIP EP300	3.09e-04	1141	20	12	HP:0031466
HumanPheno	Drooling	NEFH HDAC4 ATRX MATR3 HERC1	3.13e-04	161	20	5	HP:0002307
HumanPheno	High palate	HYOU1 ATRX PCLO MED12L HERC1 MED13L ADNP THOC2 PHIP EP300	3.32e-04	794	20	10	HP:0000218
HumanPheno	Abnormal experience of reality	NEFH ATRX MATR3 MED12L NFASC ADNP THOC2 PHIP EP300	3.67e-04	646	20	9	HP:5200423
HumanPheno	Disinhibition	WASHC4 HDAC4 ATRX MED12L NFASC MED13L ADNP THOC2 PHIP EP300	3.81e-04	807	20	10	HP:0000734
HumanPheno	Inappropriate behavior	WASHC4 HDAC4 ATRX MED12L NFASC MED13L ADNP THOC2 PHIP EP300	3.81e-04	807	20	10	HP:0000719
HumanPheno	Abnormal response to social norms	WASHC4 HDAC4 ATRX MED12L NFASC MED13L ADNP THOC2 PHIP EP300	3.81e-04	807	20	10	HP:5200123
HumanPheno	Social disinhibition	WASHC4 HDAC4 ATRX MED12L NFASC MED13L ADNP THOC2 PHIP EP300	3.81e-04	807	20	10	HP:5200029
HumanPheno	Excessive salivation	NEFH HDAC4 ATRX MATR3 HERC1	4.03e-04	170	20	5	HP:0003781
HumanPheno	Language impairment	NEFH WASHC4 HDAC4 PPFIBP1 MATR3 SPTBN2 MED12L HERC1 MED13L ADNP THOC2 EP300	4.25e-04	1178	20	12	HP:0002463
HumanPheno	Macrotia	HDAC4 PCLO HERC1 MED13L THOC2 PHIP	4.41e-04	271	20	6	HP:0000400
HumanPheno	Abnormal nasal tip morphology	WASHC4 HDAC4 ATRX MED12L MED13L ADNP PHIP	4.42e-04	386	20	7	HP:0000436
HumanPheno	Hypertelorism	HDAC4 ATRX MED12L NFASC HERC1 MED13L ADNP THOC2 PHIP EP300	4.82e-04	830	20	10	HP:0000316
HumanPheno	Meconium stained amniotic fluid	ADNP PHIP	5.19e-04	9	20	2	HP:0012420
HumanPheno	Abnormal hair whorl	HDAC4 MED13L EP300	5.39e-04	42	20	3	HP:0010721
HumanPheno	Abnormality of the forehead	WASHC4 HYOU1 HDAC4 ATRX PPFIBP1 MED12L HERC1 MED13L ADNP THOC2 PHIP EP300	5.45e-04	1208	20	12	HP:0000290
HumanPheno	Abnormally increased volition	WASHC4 HDAC4 ATRX MED12L NFASC MED13L ADNP THOC2 PHIP EP300	7.05e-04	869	20	10	HP:5200263
HumanPheno	Prominent fingertip pads	MED12L ADNP EP300	7.06e-04	46	20	3	HP:0001212
HumanPheno	Prominent digit pad	MED12L ADNP EP300	8.00e-04	48	20	3	HP:0011298
HumanPheno	Abnormal motivation	NEFH WASHC4 HDAC4 ATRX MATR3 MED12L NFASC MED13L ADNP THOC2 PHIP EP300	8.43e-04	1263	20	12	HP:5200275
HumanPheno	Abnormal volitional state	NEFH WASHC4 HDAC4 ATRX MATR3 MED12L NFASC MED13L ADNP THOC2 PHIP EP300	8.43e-04	1263	20	12	HP:0025780
HumanPheno	Thin vermilion border	WASHC4 HDAC4 ATRX MED12L ADNP PHIP EP300	8.90e-04	433	20	7	HP:0000233
Domain	Cylicin_N	CYLC1 CYLC2	1.38e-05	2	70	2	IPR029354
Domain	CYLC	CYLC1 CYLC2	1.38e-05	2	70	2	IPR026189
Domain	Cylicin_N	CYLC1 CYLC2	1.38e-05	2	70	2	PF15241
Domain	PDZ	RHPN2 PCLO MAGI3 LRRC7 AHNAK2	2.56e-04	151	70	5	PS50106
Domain	PDZ	RHPN2 PCLO MAGI3 LRRC7 AHNAK2	2.64e-04	152	70	5	IPR001478
Domain	STI1	ST13P5 ST13	6.11e-04	10	70	2	SM00727
Domain	STI1_HS-bd	ST13P5 ST13	6.11e-04	10	70	2	IPR006636
Domain	Helicase_C	ATRX DDX18 CHD9 MTREX	6.98e-04	107	70	4	PF00271
Domain	HELICc	ATRX DDX18 CHD9 MTREX	6.98e-04	107	70	4	SM00490
Domain	Helicase_C	ATRX DDX18 CHD9 MTREX	7.23e-04	108	70	4	IPR001650
Domain	Hist_deacetyl	HDAC4 HDAC2	7.45e-04	11	70	2	PF00850
Domain	His_deacetylse_dom	HDAC4 HDAC2	7.45e-04	11	70	2	IPR023801
Domain	-	HDAC4 HDAC2	7.45e-04	11	70	2	3.40.800.20
Domain	His_deacetylse	HDAC4 HDAC2	7.45e-04	11	70	2	IPR000286
Domain	HELICASE_CTER	ATRX DDX18 CHD9 MTREX	7.48e-04	109	70	4	PS51194
Domain	HELICASE_ATP_BIND_1	ATRX DDX18 CHD9 MTREX	7.48e-04	109	70	4	PS51192
Domain	DEXDc	ATRX DDX18 CHD9 MTREX	7.48e-04	109	70	4	SM00487
Domain	Helicase_ATP-bd	ATRX DDX18 CHD9 MTREX	7.75e-04	110	70	4	IPR014001
Domain	PDZ	RHPN2 MAGI3 LRRC7 AHNAK2	2.31e-03	148	70	4	SM00228
Domain	-	RHPN2 MAGI3 LRRC7 AHNAK2	2.43e-03	150	70	4	2.30.42.10
Domain	G_patch	PINX1 GPATCH8	3.33e-03	23	70	2	SM00443
Domain	G_patch_dom	PINX1 GPATCH8	3.33e-03	23	70	2	IPR000467
Domain	G_PATCH	PINX1 GPATCH8	3.33e-03	23	70	2	PS50174
Domain	G-patch	PINX1 GPATCH8	3.33e-03	23	70	2	PF01585
Domain	Bromodomain_CS	PHIP EP300	4.25e-03	26	70	2	IPR018359
Domain	TPR_1	ST13P4 ST13P5 ST13	4.69e-03	90	70	3	PF00515
Domain	TPR_1	ST13P4 ST13P5 ST13	4.69e-03	90	70	3	IPR001440
Domain	SNF2_N	ATRX CHD9	6.39e-03	32	70	2	IPR000330
Domain	SNF2_N	ATRX CHD9	6.39e-03	32	70	2	PF00176
Pathway	REACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION	HDAC4 TLE4 EP300 HDAC2	2.24e-05	48	49	4	M611
Pathway	REACTOME_ADIPOGENESIS	CHD9 MED13L THRAP3 EP300 HDAC2	3.83e-05	110	49	5	M48259
Pathway	BIOCARTA_CARM_ER_PATHWAY	HDAC4 EP300 HDAC2	9.70e-05	26	49	3	M2499
Pathway	REACTOME_SIGNALING_BY_NOTCH1	HDAC4 TLE4 EP300 HDAC2	1.24e-04	74	49	4	M616
Pathway	REACTOME_INTERACTION_BETWEEN_L1_AND_ANKYRINS	SPTBN2 SCN7A NFASC	1.66e-04	31	49	3	M877
Pathway	REACTOME_RUNX3_REGULATES_P14_ARF	HDAC4 EP300	1.76e-04	6	49	2	MM15545
Pathway	WP_INITIATION_OF_TRANSCRIPTION_AND_TRANSLATION_ELONGATION_AT_THE_HIV1_LTR	HDAC4 EP300 HDAC2	1.82e-04	32	49	3	M39521
Pathway	REACTOME_TRANSCRIPTIONAL_REGULATION_OF_WHITE_ADIPOCYTE_DIFFERENTIATION	CHD9 MED13L THRAP3 EP300	2.03e-04	84	49	4	M1008
Pathway	REACTOME_RUNX3_REGULATES_P14_ARF	HDAC4 EP300	5.23e-04	10	49	2	M27824
Pathway	REACTOME_STAT3_NUCLEAR_EVENTS_DOWNSTREAM_OF_ALK_SIGNALING	EP300 HDAC2	6.38e-04	11	49	2	M42523
Pathway	REACTOME_REGULATION_OF_LIPID_METABOLISM_BY_PPARALPHA	CHD9 MED13L THRAP3 EP300	7.39e-04	118	49	4	M27316
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	ST13P4 PSIP1 ATRX MAP4 MATR3 DDX18 SLTM NUCKS1 CHD9 GPATCH8 MED13L MTREX ADNP THOC2 THRAP3 EP300 ESF1 HP1BP3 HDAC2	1.57e-13	1014	72	19	32416067
Pubmed	Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.	MYOF HYOU1 PSIP1 MAP4 PPFIBP1 MATR3 DDX18 ECD SPTBN2 SLTM RAI14 MTREX ADNP THOC2 THRAP3 ESF1 HP1BP3 NGDN	6.41e-11	1257	72	18	36526897
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	UBE2O HYOU1 MAP4 DDX18 SPTBN2 SLTM MTREX ADNP THOC2 PHIP TP53BP1 ESF1 HP1BP3 HDAC2	6.47e-11	653	72	14	22586326
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	CYLC1 CYLC2 DENND4A HYOU1 PSIP1 ATRX FAM133A MTRES1 PCLO MATR3 SEC62 ECD SPTBN2 MAGI3 THRAP3 ESF1 HP1BP3 HDAC2 NGDN	7.01e-11	1442	72	19	35575683
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	PSIP1 ATRX MAP4 MATR3 DDX18 SLTM SENP6 PINX1 ADNP THOC2 PHIP THRAP3 TP53BP1 ESF1 HP1BP3 HDAC2	8.88e-11	954	72	16	36373674
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	DENND4A UBE2O HYOU1 PSIP1 ATRX MAP4 PCLO MATR3 DDX18 SLTM NUCKS1 MTREX ADNP THOC2 PHIP ST13 THRAP3 ESF1	4.82e-10	1425	72	18	30948266
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	UBE2O PSIP1 ATRX MAP4 MATR3 ECD NUCKS1 SENP6 RAI14 ADNP THOC2 TP53BP1 ESF1 HP1BP3 AHNAK2	6.77e-10	934	72	15	33916271
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	CASC3 UBE2O PSIP1 MAP4 MATR3 DDX18 SLTM NUCKS1 GPATCH8 THRAP3 ESF1 HDAC2 EIF4E2 NGDN	1.01e-09	807	72	14	22681889
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	UBE2O MAP4 MATR3 SPTBN2 RAI14 ADNP THOC2 THRAP3 EP300 TP53BP1 ESF1 HDAC2	1.38e-09	549	72	12	38280479
Pubmed	The functional interactome of PYHIN immune regulators reveals IFIX is a sensor of viral DNA.	CASC3 ATRX DDX18 SLTM MTREX ADNP PHIP HP1BP3 HDAC2 NGDN	2.81e-09	349	72	10	25665578
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	MYOF PSIP1 ATRX MAP4 TLE4 MATR3 NUCKS1 SENP6 GPATCH8 THOC2 THRAP3 TP53BP1 ESF1	6.30e-09	774	72	13	15302935
Pubmed	Large-scale mapping of human protein-protein interactions by mass spectrometry.	DENND4A HYOU1 HDAC4 ATRX RHPN2 PPFIBP1 MATR3 PINX1 CAB39L RAI14 LRRC7 GPATCH8 HERC1 MTREX THRAP3 EIF4E2	6.37e-09	1284	72	16	17353931
Pubmed	Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.	PSIP1 ATRX MAP4 MATR3 ADNP THOC2 ST13 THRAP3 ESF1	7.49e-09	283	72	9	30585729
Pubmed	Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.	CASC3 PSIP1 MAP4 MATR3 DDX18 SEC62 SLTM NUCKS1 PINX1 STK39 MTREX EP300	9.55e-09	653	72	12	33742100
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	CASC3 PSIP1 MAP4 FAM133A MATR3 DDX18 SEC62 SPTBN2 PINX1 RAI14 MTREX THOC2 THRAP3 HP1BP3 HDAC2 NGDN	1.60e-08	1371	72	16	36244648
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	ATRX MATR3 ARID5B MTREX ADNP THRAP3 EP300 HDAC2	1.91e-08	220	72	8	35785414
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	HYOU1 PSIP1 MAP4 MATR3 DDX18 SPTBN2 SLTM MTREX ADNP THOC2 PHIP THRAP3 HP1BP3 HDAC2	2.06e-08	1024	72	14	24711643
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	CASC3 PSIP1 MATR3 DDX18 SPTBN2 SLTM RAI14 GPATCH8 MTREX THOC2 THRAP3 HP1BP3	2.51e-08	713	72	12	29802200
Pubmed	HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.	ATRX MATR3 SLTM NUCKS1 PINX1 THRAP3 ESF1	2.56e-08	148	72	7	32538781
Pubmed	Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.	PSIP1 MAP4 MATR3 DDX18 SPTBN2 SLTM MTREX THOC2 THRAP3 HP1BP3 HDAC2 NGDN	3.30e-08	731	72	12	29298432
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	MTIF3 PSIP1 MATR3 DDX18 SPTBN2 SLTM NUCKS1 CHD9 GPATCH8 ADNP THOC2 THRAP3 HP1BP3 HDAC2	4.08e-08	1082	72	14	38697112
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	CLSTN3 UBE2O WASHC4 ATRX PPFIBP1 DDX18 SPTBN2 ARID5B SENP6 MAGI3 CHD9 RAI14 MED13L ST13 EP300	4.81e-08	1285	72	15	35914814
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	UBE2O PSIP1 ATRX SENP6 PINX1 CHD9 GPATCH8 ADNP PHIP HP1BP3 HDAC2	4.91e-08	608	72	11	36089195
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	HYOU1 HDAC4 PSIP1 MAP4 NUCKS1 CHD9 MED13L MTREX ADNP THOC2 THRAP3 EP300 TP53BP1 HDAC2	5.17e-08	1103	72	14	34189442
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	PSIP1 ATRX MATR3 DDX18 ARID5B SLTM GPATCH8 MTREX ADNP THOC2 THRAP3 EP300 HP1BP3 HDAC2 NGDN	5.27e-08	1294	72	15	30804502
Pubmed	PINK1 Content in Mitochondria is Regulated by ER-Associated Degradation.	CASC3 ST13P4 UBE2O HYOU1 MATR3 ECD SPTBN2 RAI14 ST13 THRAP3	5.38e-08	477	72	10	31300519
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	NEFH CASC3 UBE2O HDAC4 MATR3 SPTBN2 NFASC LRRC7 SLC4A4 ADNP THRAP3 TP53BP1 HDAC2	8.13e-08	963	72	13	28671696
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	PSIP1 ATRX ABCA13 MATR3 DDX18 SLTM MTREX ADNP THOC2 THRAP3 HP1BP3	9.91e-08	652	72	11	31180492
Pubmed	Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.	MYOF UBE2O HYOU1 MAP4 DDX18 SLTM NUCKS1 RAI14 STK39 ADNP ST13 THRAP3 TP53BP1 HP1BP3 AHNAK2	1.08e-07	1367	72	15	32687490
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	MATR3 DDX18 SLTM PINX1 GPATCH8 MTREX ADNP THOC2 THRAP3 TP53BP1 ESF1 HDAC2 NGDN	1.10e-07	989	72	13	36424410
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	ST13P4 PSIP1 MATR3 ECD SPTBN2 NUCKS1 LRRC7 THOC2 ST13P5 ST13 THRAP3 HDAC2	1.62e-07	847	72	12	35235311
Pubmed	Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.	WASHC4 PSIP1 MATR3 DDX18 SLTM RAI14 MTREX THOC2 THRAP3 HP1BP3 EIF4E2 NGDN	1.62e-07	847	72	12	35850772
Pubmed	Human transcription factor protein interaction networks.	ST13P4 UBE2O ATRX TLE4 MATR3 DDX18 ARID5B RAI14 GPATCH8 HERC1 ADNP EP300 TP53BP1 HP1BP3 HDAC2	1.90e-07	1429	72	15	35140242
Pubmed	KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.	NEFH UBE2O HYOU1 MAP4 PCLO MATR3 SPTBN2 NFASC RAI14 LRRC7 SLC4A4 ST13P5 ST13 THRAP3 HP1BP3	1.94e-07	1431	72	15	37142655
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	CASC3 HDAC4 PTPRG ATRX MAP4 ARID5B MAGI3 NFASC CHD9 CAB39L RAI14 LRRC7 THRAP3 EP300 HP1BP3	3.22e-07	1489	72	15	28611215
Pubmed	Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity.	MYOF WASHC4 ATRX PPFIBP1 NUCKS1 GPATCH8 SLC4A4 ADNP THRAP3 EP300 ESF1 HDAC2	3.48e-07	910	72	12	36736316
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	CASC3 HYOU1 MAP4 MATR3 DDX18 MTREX ADNP THOC2 PHIP ST13 THRAP3 HP1BP3 HDAC2 NGDN	4.50e-07	1318	72	14	30463901
Pubmed	Differential expression of HDAC and HAT genes in atrophying skeletal muscle.	HDAC4 EP300 HDAC2	4.73e-07	8	72	3	26372908
Pubmed	Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS.	PSIP1 SLTM THOC2 PHIP THRAP3 HP1BP3 HDAC2 NGDN	5.34e-07	340	72	8	29478914
Pubmed	PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.	MYOF WASHC4 PSIP1 MAP4 MATR3 RAI14 MTREX THOC2	5.34e-07	340	72	8	24332808
Pubmed	USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.	PSIP1 MATR3 RAI14 HERC1 MTREX THOC2 THRAP3	5.80e-07	234	72	7	36243803
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	WASHC4 MAP4 MATR3 DDX18 SLTM RAI14 MTREX ADNP PHIP THRAP3 TP53BP1 ESF1 AHNAK2 NGDN	6.15e-07	1353	72	14	29467282
Pubmed	Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.	MATR3 SLTM GPATCH8 MTREX THOC2 THRAP3 HP1BP3	7.67e-07	244	72	7	29884807
Pubmed	Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.	UBE2O ECD SLTM PINX1 RAI14 MED13L THOC2 PHIP THRAP3 EP300	8.57e-07	645	72	10	25281560
Pubmed	Transforming growth factor-beta stimulates p300-dependent RUNX3 acetylation, which inhibits ubiquitination-mediated degradation.	HDAC4 EP300 HDAC2	1.01e-06	10	72	3	15138260
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	UBE2O HYOU1 PSIP1 MAP4 PPFIBP1 MATR3 DDX18 ECD MTREX THRAP3 HP1BP3 HDAC2 AHNAK2 EIF4E2	1.05e-06	1415	72	14	28515276
Pubmed	A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.	MATR3 DDX18 SLTM THOC2 THRAP3 NGDN	1.13e-06	162	72	6	31363146
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	UBE2O WASHC4 MATR3 MED12L SENP6 NFASC RAI14 MTREX ADNP	1.48e-06	529	72	9	14621295
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	MYOF HDAC4 MAP4 MATR3 DDX18 CHD9 RAI14 MED13L MTREX THOC2 THRAP3 ESF1 HDAC2	1.51e-06	1247	72	13	27684187
Pubmed	A central chaperone-like role for 14-3-3 proteins in human cells.	CASC3 DENND4A HDAC4 MAP4 PPFIBP1 MATR3 MAGI3 RAI14 MTREX AHNAK2 EIF4E2	1.53e-06	861	72	11	36931259
Pubmed	Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.	PSIP1 ATRX MATR3 DDX18 CHD9 ADNP THOC2 PHIP HP1BP3	1.58e-06	533	72	9	30554943
Pubmed	mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.	MAP4 MATR3 SPTBN2 RAI14 MTREX THRAP3 ESF1	1.66e-06	274	72	7	34244482
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	HYOU1 ATRX MAP4 TLE4 MATR3 ARID5B SLTM GPATCH8 HERC1 THOC2 TP53BP1 ESF1	2.17e-06	1084	72	12	11544199
Pubmed	Transcription factor protein interactomes reveal genetic determinants in heart disease.	PSIP1 MATR3 SLTM MTREX ADNP THRAP3 EP300 HDAC2	2.20e-06	411	72	8	35182466
Pubmed	CYLD Regulates Centriolar Satellites Proteostasis by Counteracting the E3 Ligase MIB1.	MYOF HYOU1 MAP4 MATR3 MTREX HP1BP3	2.22e-06	182	72	6	31067453
Pubmed	Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.	CLSTN3 MATR3 SENP6 NFASC ADNP	2.24e-06	101	72	5	9872452
Pubmed	Genetic variations strongly influence phenotypic outcome in the mouse retina.	TLE4 RAI14 THRAP3 TP53BP1	2.58e-06	46	72	4	21779340
Pubmed	A comprehensive resource of interacting protein regions for refining human transcription factor networks.	MATR3 SEC62 SENP6 CHGB TP53BP1 HDAC2	2.93e-06	191	72	6	20195357
Pubmed	Modulation of smooth muscle gene expression by association of histone acetyltransferases and deacetylases with myocardin.	HDAC4 EP300 HDAC2	3.05e-06	14	72	3	15601857
Pubmed	Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.	UBE2O MAP4 PCLO SEC62 LRRC7 ATE1 SLC4A4 ST13P5 ST13 THRAP3 TP53BP1 HDAC2	3.61e-06	1139	72	12	36417873
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	PSIP1 MAP4 MATR3 DDX18 PINX1 MTREX THOC2 ESF1 HP1BP3 NGDN	3.66e-06	759	72	10	35915203
Pubmed	TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.	PSIP1 MAP4 MATR3 DDX18 SPTBN2 SLTM RAI14 THOC2 THRAP3 HP1BP3 NGDN	3.90e-06	949	72	11	36574265
Pubmed	Cylicins are a structural component of the sperm calyx being indispensable for male fertility in mice and human.	CYLC1 CYLC2	4.23e-06	2	72	2	38013430
Pubmed	The protein complexity of the cytoskeleton of bovine and human sperm heads: the identification and characterization of cylicin II.	CYLC1 CYLC2	4.23e-06	2	72	2	7737358
Pubmed	Histone deacetylase 4 interacts with 53BP1 to mediate the DNA damage response.	HDAC4 TP53BP1	4.23e-06	2	72	2	12668657
Pubmed	St13 protects against disordered acinar cell arachidonic acid pathway in chronic pancreatitis.	ST13P5 ST13	4.23e-06	2	72	2	35562743
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	PSIP1 MATR3 DDX18 MTREX ADNP THRAP3 HP1BP3 HDAC2 NGDN	4.41e-06	605	72	9	28977666
Pubmed	Voltage-dependent conformational changes of Kv1.3 channels activate cell proliferation.	MAP4 ABCA13 SENP6 CHD9 THOC2 EIF4E2	4.79e-06	208	72	6	33230847
Pubmed	Phosphoproteome analysis of the human mitotic spindle.	MAP4 GPATCH8 THRAP3 ESF1 HDAC2 NGDN	5.06e-06	210	72	6	16565220
Pubmed	Direct interaction between the PRDM3 and PRDM16 tumor suppressors and the NuRD chromatin remodeling complex.	PSIP1 MATR3 MTREX THOC2 HP1BP3 HDAC2	5.79e-06	215	72	6	30462309
Pubmed	Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.	ATRX DDX18 SENP6 CHD9 ADNP ESF1	6.95e-06	222	72	6	37071664
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	DENND4A HYOU1 ATRX RHPN2 PPFIBP1 SLTM MTREX ESF1 HP1BP3	7.85e-06	650	72	9	38777146
Pubmed	Acetylation of poly(ADP-ribose) polymerase-1 by p300/CREB-binding protein regulates coactivation of NF-kappaB-dependent transcription.	THRAP3 EP300 HDAC2	8.05e-06	19	72	3	16204234
Pubmed	Comprehensive identification of phosphorylation sites in postsynaptic density preparations.	PSIP1 ATRX PCLO MATR3 LRRC7 THRAP3	8.72e-06	231	72	6	16452087
Pubmed	Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.	ST13P4 UBE2O NUCKS1 RAI14 ADNP THRAP3 TP53BP1 ESF1	1.01e-05	506	72	8	30890647
Pubmed	SR protein kinases promote splicing of nonconsensus introns.	DENND4A MAP4 ABCA13 MATR3 SLTM THRAP3 NGDN	1.01e-05	361	72	7	26167880
Pubmed	Identification of novel Ack1-interacting proteins and Ack1 phosphorylated sites in mouse brain by mass spectrometry.	MAP4 MATR3 RAI14 LRRC7	1.17e-05	67	72	4	29254152
Pubmed	HDAC4 degradation during senescence unleashes an epigenetic program driven by AP-1/p300 at selected enhancers and super-enhancers.	HDAC4 EP300	1.27e-05	3	72	2	33966634
Pubmed	HDAC4 influences the DNA damage response and counteracts senescence by assembling with HDAC1/HDAC2 to control H2BK120 acetylation and homology-directed repair.	HDAC4 HDAC2	1.27e-05	3	72	2	38874468
Pubmed	Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2.	EP300 HDAC2	1.27e-05	3	72	2	27635759
Pubmed	ATRA activates and PDGF-BB represses the SM22α promoter through KLF4 binding to, or dissociating from, its cis-DNA elements.	EP300 HDAC2	1.27e-05	3	72	2	21252119
Pubmed	Factors determining DNA double-strand break repair pathway choice in G2 phase.	ATRX TP53BP1	1.27e-05	3	72	2	21317870
Pubmed	Acetylation inactivates the transcriptional repressor BCL6.	EP300 HDAC2	1.27e-05	3	72	2	12402037
Pubmed	ZMYM3 regulates BRCA1 localization at damaged chromatin to promote DNA repair.	MATR3 ARID5B ADNP TP53BP1 HDAC2	1.55e-05	150	72	5	28242625
Pubmed	The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.	MYOF MAP4 ECD NUCKS1 RAI14 AHNAK2	1.56e-05	256	72	6	33397691
Pubmed	Targeting SKA3 suppresses the proliferation and chemoresistance of laryngeal squamous cell carcinoma via impairing PLK1-AKT axis-mediated glycolysis.	SLTM MTREX THRAP3 TP53BP1	1.56e-05	72	72	4	33106477
Pubmed	Defining the NSD2 interactome: PARP1 PARylation reduces NSD2 histone methyltransferase activity and impedes chromatin binding.	ATRX NUCKS1 ADNP HP1BP3	1.56e-05	72	72	4	31248990
Pubmed	Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.	NEFH UBE2O HYOU1 ATRX SLTM CAB39L ST13 AHNAK2	1.56e-05	538	72	8	28524877
Pubmed	ISG15 Connects Autophagy and IFN-γ-Dependent Control of Toxoplasma gondii Infection in Human Cells.	MYOF MATR3 RAI14 THRAP3 HP1BP3 AHNAK2	2.02e-05	268	72	6	33024031
Pubmed	Phosphoproteomic analysis of the human pituitary.	ST13P4 CHGB ST13	2.40e-05	27	72	3	16807684
Pubmed	The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.	UBE2O WASHC4 MAP4 MATR3 DDX18 CHD9 MTREX ST13 THRAP3 HP1BP3 HDAC2	2.41e-05	1153	72	11	29845934
Pubmed	Telencephalic embryonic subtractive sequences: a unique collection of neurodevelopmental genes.	PSIP1 MATR3 ADNP THRAP3 TP53BP1	2.45e-05	165	72	5	16107646
Pubmed	NUCKS1 promotes RAD54 activity in homologous recombination DNA repair.	ATRX NUCKS1	2.53e-05	4	72	2	32876692
Pubmed	FOXP3 up-regulates p21 expression by site-specific inhibition of histone deacetylase 2/histone deacetylase 4 association to the locus.	HDAC4 HDAC2	2.53e-05	4	72	2	19276356
Pubmed	AHNAK, a novel component of the dysferlin protein complex, redistributes to the cytoplasm with dysferlin during skeletal muscle regeneration.	MYOF AHNAK2	2.53e-05	4	72	2	17185750
Pubmed	Yin Yang 1 enhances cyclooxygenase-2 gene expression in macrophages.	EP300 HDAC2	2.53e-05	4	72	2	17220375
Pubmed	HDAC1/2-Dependent P0 Expression Maintains Paranodal and Nodal Integrity Independently of Myelin Stability through Interactions with Neurofascins.	NFASC HDAC2	2.53e-05	4	72	2	26406915
Pubmed	Histone deacetylase (HDAC)-1, -2, -4 and -6 expression in human pancreatic adenocarcinoma: associations with clinicopathological parameters, tumor proliferative capacity and patients' survival.	HDAC4 HDAC2	2.53e-05	4	72	2	26502922
Pubmed	Autism candidate gene DIP2A regulates spine morphogenesis via acetylation of cortactin.	HDAC4 EP300 HDAC2	2.69e-05	28	72	3	31600191
Pubmed	Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.	CASC3 HYOU1 PSIP1 PCLO NUCKS1 GPATCH8 EP300	2.88e-05	425	72	7	24999758
Interaction	CBX1 interactions	PSIP1 ATRX MAP4 NUCKS1 ATE1 ADNP ST13 THRAP3 EP300 HP1BP3 HDAC2	5.85e-09	288	72	11	int:CBX1
Interaction	SNRNP70 interactions	CASC3 DENND4A UBE2O PSIP1 MATR3 DDX18 SPTBN2 SLTM PINX1 RAI14 GPATCH8 MTREX THOC2 THRAP3 EP300 HP1BP3 HDAC2	4.75e-08	984	72	17	int:SNRNP70
Interaction	MECOM interactions	HDAC4 PSIP1 MATR3 MAGI3 MTREX ADNP THOC2 PHIP TP53BP1 HP1BP3 HDAC2	5.47e-08	358	72	11	int:MECOM
Interaction	CBX3 interactions	UBE2O PSIP1 ATRX NUCKS1 SENP6 PINX1 CHD9 ADNP PHIP EP300 TP53BP1 ESF1 HP1BP3 HDAC2	5.64e-08	646	72	14	int:CBX3
Interaction	SMC5 interactions	HDAC4 PSIP1 ATRX MAP4 MATR3 DDX18 SLTM SENP6 PINX1 ADNP THOC2 PHIP THRAP3 TP53BP1 ESF1 HP1BP3 HDAC2	6.00e-08	1000	72	17	int:SMC5
Interaction	SIRT7 interactions	UBE2O HYOU1 MAP4 DDX18 SPTBN2 SLTM MTREX ADNP THOC2 PHIP TP53BP1 ESF1 HP1BP3 HDAC2	3.17e-07	744	72	14	int:SIRT7
Interaction	MECP2 interactions	MTIF3 PSIP1 ATRX MATR3 DDX18 SPTBN2 SLTM NUCKS1 CHD9 GPATCH8 ADNP THOC2 THRAP3 EP300 TP53BP1 ESF1 HP1BP3 HDAC2	4.22e-07	1287	72	18	int:MECP2
Interaction	PARP1 interactions	MYOF UBE2O HYOU1 HDAC4 PSIP1 DDX18 ECD NUCKS1 SENP6 PINX1 MTREX PHIP THRAP3 EP300 TP53BP1 ESF1 HP1BP3 HDAC2	5.85e-07	1316	72	18	int:PARP1
Interaction	CSNK2A1 interactions	DENND4A UBE2O WASHC4 PSIP1 ATRX FAM133A ECD NUCKS1 MTREX ADNP THRAP3 EP300 ESF1 HP1BP3 HDAC2	1.13e-06	956	72	15	int:CSNK2A1
Interaction	CEBPA interactions	HYOU1 HDAC4 PSIP1 MAP4 MATR3 DDX18 NUCKS1 CHD9 MED13L MTREX ADNP THOC2 THRAP3 EP300 TP53BP1 HP1BP3 HDAC2	1.32e-06	1245	72	17	int:CEBPA
Interaction	NAA40 interactions	UBE2O PSIP1 ATRX MAP4 MATR3 ECD NUCKS1 SENP6 RAI14 ADNP THOC2 TP53BP1 ESF1 HP1BP3 AHNAK2	1.51e-06	978	72	15	int:NAA40
Interaction	H3C1 interactions	CYLC2 PSIP1 ATRX DDX18 NUCKS1 SENP6 PINX1 ADNP PHIP THRAP3 EP300 TP53BP1 HP1BP3 HDAC2	3.06e-06	901	72	14	int:H3C1
Interaction	MED12 interactions	CASC3 MATR3 ECD MED12L MED13L THRAP3 TP53BP1	3.14e-06	176	72	7	int:MED12
Interaction	MED20 interactions	SLTM MED12L MED13L THOC2 THRAP3 EP300 TP53BP1	3.78e-06	181	72	7	int:MED20
Interaction	MYCN interactions	CASC3 PSIP1 MATR3 DDX18 SLTM PINX1 CHGB GPATCH8 MTREX ADNP THOC2 THRAP3 EP300 ESF1 HP1BP3 HDAC2 NGDN	4.98e-06	1373	72	17	int:MYCN
Interaction	HBS1L interactions	HDAC4 PSIP1 FAM133A MTREX EP300 EIF4E2	5.64e-06	125	72	6	int:HBS1L
Interaction	H2BC8 interactions	UBE2O PSIP1 ATRX ARID5B NUCKS1 SENP6 PINX1 ADNP PHIP ESF1 HP1BP3	5.89e-06	576	72	11	int:H2BC8
Interaction	CENPA interactions	PSIP1 ATRX DDX18 SENP6 PINX1 THOC2 PHIP ESF1 HP1BP3	7.68e-06	377	72	9	int:CENPA
Interaction	IFI16 interactions	MATR3 DDX18 SLTM PINX1 RAI14 MTREX PHIP EP300 TP53BP1 ESF1 HP1BP3 NGDN	7.80e-06	714	72	12	int:IFI16
Interaction	ST13P5 interactions	ST13P4 ST13P5 ST13	9.40e-06	12	72	3	int:ST13P5
Interaction	CEBPB interactions	HYOU1 HDAC4 PSIP1 MAP4 MATR3 DDX18 SPTBN2 GPATCH8 MTREX ADNP ST13 THRAP3 EP300 TP53BP1 HP1BP3 HDAC2 NGDN	9.63e-06	1443	72	17	int:CEBPB
Interaction	CIT interactions	PSIP1 PCLO MATR3 DDX18 SPTBN2 MAGI3 RAI14 HERC1 MTREX ADNP THOC2 PHIP THRAP3 ESF1 HP1BP3 HDAC2 AHNAK2	1.03e-05	1450	72	17	int:CIT
Interaction	H1-1 interactions	NEFH PCLO DDX18 PINX1 RAI14 ADNP THRAP3 EP300 HP1BP3 NGDN	1.23e-05	507	72	10	int:H1-1
Interaction	DBR1 interactions	ATRX MTREX EP300 TP53BP1	1.24e-05	40	72	4	int:DBR1
Interaction	H3-3A interactions	PSIP1 ATRX SENP6 PINX1 CHD9 GPATCH8 ADNP PHIP THRAP3 EP300 HP1BP3 HDAC2	1.26e-05	749	72	12	int:H3-3A
Interaction	SAP18 interactions	CASC3 UBE2O PSIP1 MATR3 GPATCH8 ADNP THRAP3 HDAC2	1.30e-05	305	72	8	int:SAP18
Interaction	NUCKS1 interactions	HDAC4 PSIP1 ATRX NUCKS1 PHIP EP300 HP1BP3	1.36e-05	220	72	7	int:NUCKS1
Interaction	MEN1 interactions	WASHC4 PSIP1 ATRX MATR3 DDX18 SLTM MTREX ADNP THOC2 THRAP3 TP53BP1 HP1BP3 HDAC2 EIF4E2	1.40e-05	1029	72	14	int:MEN1
Interaction	FUS interactions	KLHL40 MATR3 SLTM GPATCH8 MTREX THOC2 ST13 THRAP3 EP300 TP53BP1 HP1BP3 HDAC2	1.40e-05	757	72	12	int:FUS
Interaction	TAF15 interactions	UBE2O MATR3 SLTM MTREX THOC2 THRAP3 EP300 TP53BP1 HDAC2	1.44e-05	408	72	9	int:TAF15
Interaction	FOXK2 interactions	PSIP1 SEC62 ADNP THRAP3 EP300 TP53BP1 HDAC2	1.57e-05	225	72	7	int:FOXK2
Interaction	OBSL1 interactions	PSIP1 PPFIBP1 PCLO MATR3 DDX18 SPTBN2 SLTM MTREX THOC2 PHIP THRAP3 HP1BP3 HDAC2	1.62e-05	902	72	13	int:OBSL1
Interaction	EWSR1 interactions	CASC3 HYOU1 PSIP1 PCLO MATR3 ECD NUCKS1 RAI14 GPATCH8 THRAP3 EP300 TP53BP1 HDAC2	1.70e-05	906	72	13	int:EWSR1
Interaction	BMI1 interactions	CASC3 ATRX SLTM GPATCH8 MTREX ADNP THRAP3 EP300 HP1BP3 HDAC2 EIF4E2	2.07e-05	659	72	11	int:BMI1
Interaction	XRCC6 interactions	UBE2O HYOU1 PSIP1 ATRX MAP4 MATR3 ADNP THOC2 ST13 THRAP3 EP300 TP53BP1 ESF1	2.19e-05	928	72	13	int:XRCC6
Interaction	PML interactions	ATRX MAP4 KLHL40 SLTM SENP6 STK39 THOC2 PHIP EP300 TP53BP1 HP1BP3 HDAC2 AHNAK2	2.31e-05	933	72	13	int:PML
Interaction	PINK1 interactions	CASC3 ST13P4 UBE2O HYOU1 MATR3 ECD SPTBN2 RAI14 ST13 THRAP3 AHNAK2	2.73e-05	679	72	11	int:PINK1
Interaction	EP300 interactions	CASC3 PSIP1 MAP4 MATR3 DDX18 SEC62 SLTM NUCKS1 PINX1 STK39 HERC1 MTREX THRAP3 EP300 TP53BP1 HDAC2	2.73e-05	1401	72	16	int:EP300
Interaction	NR2C2 interactions	CASC3 HYOU1 HDAC4 MAP4 MATR3 DDX18 MTREX ADNP THOC2 PHIP ST13 THRAP3 TP53BP1 HP1BP3 HDAC2 NGDN	2.78e-05	1403	72	16	int:NR2C2
Interaction	ZNF330 interactions	UBE2O PSIP1 DDX18 SENP6 PINX1 GPATCH8 PHIP ESF1 HP1BP3	2.91e-05	446	72	9	int:ZNF330
Interaction	ASF1A interactions	HDAC4 ATRX SPTBN2 ARID5B THOC2 ST13 EP300	3.00e-05	249	72	7	int:ASF1A
Interaction	DHX40 interactions	UBE2O SLTM PINX1 GPATCH8 HERC1 THRAP3 ESF1	3.00e-05	249	72	7	int:DHX40
Interaction	H2BC21 interactions	CYLC1 PSIP1 ATRX PCLO NUCKS1 ARHGAP30 ADNP PHIP EP300 HP1BP3 HDAC2	3.42e-05	696	72	11	int:H2BC21
Interaction	HES6 interactions	RHPN2 TLE4 HERC1 EP300	3.56e-05	52	72	4	int:HES6
Interaction	MACROH2A1 interactions	HDAC4 PSIP1 ATRX FAM133A MATR3 NUCKS1 ADNP THRAP3 HDAC2	3.58e-05	458	72	9	int:MACROH2A1
Interaction	PRC1 interactions	PSIP1 ATRX MATR3 DDX18 SPTBN2 SLTM RAI14 HERC1 PHIP THRAP3 ESF1 HP1BP3 HDAC2	3.58e-05	973	72	13	int:PRC1
Interaction	ST13P4 interactions	ST13P4 ST13P5 ST13	4.07e-05	19	72	3	int:ST13P4
Interaction	NUMA1 interactions	PSIP1 MATR3 NUCKS1 ADNP PHIP EP300 TP53BP1 HP1BP3 POLR3G	4.30e-05	469	72	9	int:NUMA1
Interaction	SUMO2 interactions	HDAC4 ATRX MAP4 SENP6 GPATCH8 EP300 TP53BP1 HP1BP3 HDAC2 AHNAK2	4.55e-05	591	72	10	int:SUMO2
Interaction	H2AX interactions	UBE2O HYOU1 PSIP1 ATRX MATR3 GPATCH8 ADNP EP300 TP53BP1 HDAC2	4.69e-05	593	72	10	int:H2AX
Interaction	USP7 interactions	UBE2O PSIP1 ATRX FAM133A MATR3 RAI14 ARHGAP30 HERC1 MTREX THOC2 PHIP ST13 THRAP3 EP300 EIF4E2	5.09e-05	1313	72	15	int:USP7
Interaction	DDX23 interactions	MATR3 DDX18 SLTM PINX1 GPATCH8 THOC2 THRAP3 EP300 ESF1	5.15e-05	480	72	9	int:DDX23
Interaction	RNF2 interactions	HYOU1 PCLO MATR3 DDX18 ADNP THOC2 PHIP THRAP3 ESF1 HP1BP3 HDAC2 NGDN	5.24e-05	866	72	12	int:RNF2
Interaction	H2AZ1 interactions	PSIP1 ARID5B NUCKS1 ADNP PHIP THRAP3 HP1BP3 HDAC2	5.24e-05	371	72	8	int:H2AZ1
Interaction	AP3B1 interactions	UBE2O WASHC4 HDAC4 ATRX SEC62 EP300	5.54e-05	187	72	6	int:AP3B1
Interaction	KCNA3 interactions	HYOU1 MAP4 ABCA13 PPFIBP1 SENP6 MAGI3 CHD9 RAI14 LRRC7 ATE1 THOC2 EIF4E2	5.54e-05	871	72	12	int:KCNA3
Interaction	HMGB1 interactions	CYLC2 HDAC4 ATRX DDX18 SLTM THRAP3 EP300 HP1BP3 NGDN	5.67e-05	486	72	9	int:HMGB1
Interaction	AATF interactions	MATR3 DDX18 SLTM PINX1 THOC2 THRAP3 ESF1 NGDN	5.76e-05	376	72	8	int:AATF
Interaction	ZC3H18 interactions	PSIP1 MAP4 MATR3 DDX18 SPTBN2 SLTM MTREX THOC2 THRAP3 HP1BP3 HDAC2 NGDN	5.92e-05	877	72	12	int:ZC3H18
Interaction	NSD2 interactions	ATRX NUCKS1 MTREX ADNP THRAP3 HP1BP3 HDAC2	6.04e-05	278	72	7	int:NSD2
Interaction	EIF4A3 interactions	CASC3 UBE2O PSIP1 MATR3 GPATCH8 MTREX THOC2 THRAP3 ESF1	6.94e-05	499	72	9	int:EIF4A3
Interaction	PRDM16 interactions	PSIP1 MTREX THOC2 PHIP HP1BP3 HDAC2	6.98e-05	195	72	6	int:PRDM16
Interaction	TNK2 interactions	MAP4 MATR3 MAGI3 RAI14 LRRC7 EP300	6.98e-05	195	72	6	int:TNK2
Interaction	KIF1C interactions	CASC3 HDAC4 NBEAL1 THOC2 EIF4E2	7.00e-05	120	72	5	int:KIF1C
Interaction	NUP43 interactions	PSIP1 MAP4 DDX18 SENP6 CHD9 GPATCH8 PHIP HP1BP3 HDAC2 AHNAK2	7.27e-05	625	72	10	int:NUP43
Interaction	RICTOR interactions	MYOF ST13P4 HYOU1 MAP4 RAI14 ST13P5 PHIP ST13 THRAP3 EP300 AHNAK2	7.48e-05	759	72	11	int:RICTOR
Interaction	SIRT6 interactions	ATRX MATR3 DDX18 GPATCH8 MTREX ADNP EP300 TP53BP1 ESF1 HDAC2	7.56e-05	628	72	10	int:SIRT6
Interaction	KIF20A interactions	PSIP1 PPFIBP1 PCLO MATR3 DDX18 SPTBN2 NUCKS1 RAI14 HERC1 THOC2 THRAP3 HDAC2 AHNAK2	7.96e-05	1052	72	13	int:KIF20A
Interaction	DCPS interactions	PSIP1 SLTM THOC2 PHIP THRAP3 HP1BP3 HDAC2 NGDN	7.98e-05	394	72	8	int:DCPS
Interaction	LSG1 interactions	HDAC4 SEC62 PINX1 EP300 ESF1 HP1BP3	8.72e-05	203	72	6	int:LSG1
Interaction	DNAJC9 interactions	UBE2O HYOU1 PSIP1 DDX18 EP300 ESF1 HP1BP3	8.95e-05	296	72	7	int:DNAJC9
Interaction	ABCF2 interactions	UBE2O DDX18 PINX1 LRRC7 EP300 HDAC2	1.02e-04	209	72	6	int:ABCF2
Interaction	H2BC13 interactions	CYLC1 ATRX MAP4 PCLO HERC1 HDAC2	1.05e-04	210	72	6	int:H2BC13
Interaction	CHD4 interactions	UBE2O PSIP1 MATR3 DDX18 GPATCH8 MTREX ADNP PHIP THRAP3 EP300 HP1BP3 HDAC2	1.12e-04	938	72	12	int:CHD4
Interaction	ESCO2 interactions	HDAC4 MATR3 HP1BP3 HDAC2	1.15e-04	70	72	4	int:ESCO2
Interaction	MAU2 interactions	MATR3 MED13L THRAP3 TP53BP1 HDAC2	1.27e-04	136	72	5	int:MAU2
Interaction	DOT1L interactions	PSIP1 ATRX MATR3 DDX18 SLTM RAI14 MTREX THOC2 THRAP3 HP1BP3 NGDN	1.29e-04	807	72	11	int:DOT1L
Interaction	RNPS1 interactions	CASC3 UBE2O HDAC4 GPATCH8 MTREX THRAP3 EP300 ESF1	1.35e-04	425	72	8	int:RNPS1
Interaction	HMGN2 interactions	CYLC2 UBE2O PCLO NUCKS1 HERC1 EP300	1.42e-04	222	72	6	int:HMGN2
Interaction	BCL11B interactions	ARID5B PHIP EP300 HDAC2	1.43e-04	74	72	4	int:BCL11B
Interaction	GLDC interactions	MAP4 MATR3 SPTBN2 RAI14 MTREX THRAP3 ESF1	1.48e-04	321	72	7	int:GLDC
Interaction	EED interactions	WASHC4 HYOU1 RHPN2 MATR3 DDX18 SLTM NUCKS1 RAI14 MTREX ADNP THOC2 THRAP3 TP53BP1 HP1BP3 HDAC2	1.49e-04	1445	72	15	int:EED
Interaction	HDAC7 interactions	HDAC4 ADNP EP300 HDAC2 EIF4E2	1.50e-04	141	72	5	int:HDAC7
Interaction	H2BC12 interactions	CYLC1 ATRX MAP4 PCLO SLTM MTREX HP1BP3	1.51e-04	322	72	7	int:H2BC12
Interaction	EMSY interactions	UBE2O NUCKS1 CHD9 TP53BP1 HDAC2	1.71e-04	145	72	5	int:EMSY
Interaction	HECTD1 interactions	PSIP1 MAP4 FAM133A MATR3 DDX18 PINX1 MTREX THOC2 EP300 ESF1 HP1BP3 NGDN	1.76e-04	984	72	12	int:HECTD1
Interaction	THRAP3 interactions	CASC3 UBE2O HDAC4 PSIP1 PCLO MATR3 THRAP3 EP300	1.79e-04	443	72	8	int:THRAP3
Interaction	AR interactions	HDAC4 ATRX TLE4 MATR3 ARID5B MED12L MED13L MTREX ADNP THRAP3 EP300 HDAC2	1.89e-04	992	72	12	int:AR
Interaction	SRSF1 interactions	CASC3 PSIP1 MATR3 NUCKS1 PINX1 THRAP3 EP300 TP53BP1 NGDN	1.90e-04	570	72	9	int:SRSF1
Interaction	CUL7 interactions	HYOU1 HDAC4 PSIP1 MATR3 DDX18 MTREX THOC2 PHIP THRAP3 HP1BP3 HDAC2	1.92e-04	845	72	11	int:CUL7
Interaction	MIER1 interactions	ARID5B ADNP EP300 HDAC2	1.93e-04	80	72	4	int:MIER1
Interaction	MED4 interactions	UBE2O ECD MED12L RAI14 MED13L THOC2 THRAP3 TP53BP1	1.99e-04	450	72	8	int:MED4
Interaction	MED18 interactions	MED12L MED13L TP53BP1 HDAC2	2.02e-04	81	72	4	int:MED18
Interaction	TERF2 interactions	CYLC2 SLTM GPATCH8 MTREX THRAP3 EP300 TP53BP1	2.10e-04	340	72	7	int:TERF2
Interaction	ATG16L1 interactions	MYOF DENND4A WASHC4 MAP4 MATR3 ECD SLTM ARHGAP30 LRRC7 GPATCH8 HERC1 MTREX HDAC2	2.13e-04	1161	72	13	int:ATG16L1
Interaction	SRPK2 interactions	MAP4 TLE4 MATR3 DDX18 SLTM GPATCH8 THRAP3 EP300 HP1BP3 NGDN	2.23e-04	717	72	10	int:SRPK2
Interaction	CSNK2A2 interactions	UBE2O ATRX FAM133A NUCKS1 ADNP THRAP3 EP300 TP53BP1 HDAC2 AHNAK2	2.26e-04	718	72	10	int:CSNK2A2
Interaction	LUC7L interactions	CASC3 UBE2O MTRES1 GPATCH8 THRAP3 EP300	2.27e-04	242	72	6	int:LUC7L
Interaction	DGCR8 interactions	UBE2O DDX18 PINX1 TP53BP1 HP1BP3 NGDN	2.27e-04	242	72	6	int:DGCR8
Interaction	BIRC3 interactions	DENND4A HYOU1 PSIP1 MAP4 MATR3 DDX18 SLTM NUCKS1 MTREX THOC2 PHIP ST13 THRAP3 EP300	2.30e-04	1334	72	14	int:BIRC3
Cytoband	Ensembl 112 genes in cytogenetic band chr15q22	DENND4A SLTM HERC1	1.20e-03	132	72	3	chr15q22
Cytoband	Xq21.1	CYLC1 ATRX	1.24e-03	33	72	2	Xq21.1
Cytoband	Ensembl 112 genes in cytogenetic band chrXq21	CYLC1 ATRX FAM133A	1.51e-03	143	72	3	chrXq21
Cytoband	22q13.2	ST13 EP300	4.05e-03	60	72	2	22q13.2
GeneFamily	PDZ domain containing	RHPN2 PCLO MAGI3 LRRC7 AHNAK2	5.03e-05	152	48	5	1220
GeneFamily	X-linked mental retardation\|RNA helicases	ATRX MTREX	3.74e-04	11	48	2	1168
GeneFamily	G-patch domain containing\|Minor histocompatibility antigens	PINX1 GPATCH8	1.54e-03	22	48	2	579
GeneFamily	Cyclins\|Mediator complex	MED12L MED13L	3.46e-03	33	48	2	1061
Coexpression	DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	MYOF WASHC4 HDAC4 ATRX TLE4 ARID5B CHD9 STK39 GPATCH8 MED13L MTREX ADNP THOC2 PHIP TP53BP1	9.25e-09	856	72	15	M4500
Coexpression	MILI_PSEUDOPODIA_HAPTOTAXIS_UP	PSIP1 ATRX FAM133A MATR3 SLTM CAB39L ATE1 ST13P5 ST13 ESF1 HDAC2	2.23e-07	534	72	11	MM1054
Coexpression	MARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN	PTPRG ATRX MATR3 DDX18 SEC62 NUCKS1 ST13P5 ST13 THRAP3 HP1BP3	2.27e-06	543	72	10	MM997
Coexpression	DACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN	WASHC4 ATRX TLE4 ARID5B CHD9 STK39 MED13L MTREX PHIP	5.19e-06	466	72	9	M13522
Coexpression	MARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN	PTPRG ATRX MATR3 DDX18 SEC62 NUCKS1 ST13 THRAP3 HP1BP3	1.23e-05	519	72	9	M3395
Coexpression	MILI_PSEUDOPODIA_HAPTOTAXIS_UP	PSIP1 ATRX MATR3 SLTM CAB39L ATE1 ST13 ESF1 HDAC2	1.31e-05	523	72	9	M12707
Coexpression	DAZARD_RESPONSE_TO_UV_NHEK_DN	ATRX TLE4 ARID5B CHD9 MED13L ADNP PHIP	1.87e-05	300	72	7	M8702
Coexpression	GSE3982_MAST_CELL_VS_TH2_DN	MYOF PPFIBP1 DDX18 THRAP3 ESF1 HP1BP3	1.88e-05	200	72	6	M5456
Coexpression	LAKE_ADULT_KIDNEY_C3_PROXIMAL_TUBULE_EPITHELIAL_CELLS_S1_S2	PTPRG PPFIBP1 PCLO CHD9 SLC4A4 THOC2	3.30e-05	221	72	6	M39222
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	HDAC4 ECD ARID5B NUCKS1 CHD9 ST13P5 ST13 THRAP3	5.42e-05	484	72	8	MM999
Coexpression	NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_3DY_NEGATIVE	ATRX PPFIBP1 MATR3 ECD NUCKS1 THOC2 NGDN	6.27e-05	363	72	7	M41103
Coexpression	BILD_CTNNB1_ONCOGENIC_SIGNATURE	WASHC4 ATRX CHD9 THOC2	6.73e-05	79	72	4	M7102
Coexpression	BONOME_OVARIAN_CANCER_SURVIVAL_SUBOPTIMAL_DEBULKING	MYOF DENND4A HDAC4 TLE4 RAI14 STK39 HERC1 ST13	7.40e-05	506	72	8	M253
Coexpression	TABULA_MURIS_SENIS_KIDNEY_KIDNEY_COLLECTING_DUCT_PRINCIPAL_CELL_AGEING	ATRX PPFIBP1 SLTM NUCKS1 THOC2 ST13P5 ST13	1.05e-04	394	72	7	MM3724
Coexpression	GSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP	NBEAL1 MED12L NUCKS1 HERC1 EP300	1.39e-04	180	72	5	M8239
Coexpression	GSE26290_CTRL_VS_AKT_INHIBITOR_TREATED_ANTI_CD3_AND_IL2_STIM_CD8_TCELL_UP	CYLC2 PCLO DDX18 CHD9 THOC2	2.07e-04	196	72	5	M8135
Coexpression	GSE27291_0H_VS_6H_STIM_GAMMADELTA_TCELL_DN	FAM133A MTRES1 IGSF5 THOC2 THRAP3	2.07e-04	196	72	5	M8453
Coexpression	GAUTAM_EYE_CHOROID_SCLERA_FIBROBLASTS	PTPRG ARID5B NUCKS1 NFASC CHD9	2.22e-04	199	72	5	M43608
Coexpression	GSE20366_TREG_VS_NAIVE_CD4_TCELL_HOMEOSTATIC_CONVERSION_DN	HDAC4 TLE4 CHD9 STK39 MED13L	2.22e-04	199	72	5	M4331
Coexpression	GSE24574_NAIVE_VS_TCONV_CD4_TCELL_DN	NEFH HYOU1 SENP6 MTREX EIF4E2	2.27e-04	200	72	5	M8330
Coexpression	GSE34006_A2AR_KO_VS_A2AR_AGONIST_TREATED_TREG_DN	SCN7A STK39 GPATCH8 MTREX HP1BP3	2.27e-04	200	72	5	M9049
Coexpression	GSE27859_DC_VS_CD11C_INT_F480_INT_DC_DN	NEFH PSIP1 MTRES1 MTREX POLR3G	2.27e-04	200	72	5	M8600
Coexpression	GSE24814_STAT5_KO_VS_WT_PRE_BCELL_DN	MYOF CLSTN3 HDAC4 ATRX STK39	2.27e-04	200	72	5	M8427
Coexpression	GSE39820_CTRL_VS_TGFBETA3_IL6_CD4_TCELL_UP	NEFH NUCKS1 MTREX ADNP HDAC2	2.27e-04	200	72	5	M5610
Coexpression	TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_MONOCYTE_UP	NEFH MYOF PPFIBP1 DDX18 ESF1	2.44e-04	203	72	5	M10184
Coexpression	BUSSLINGER_GASTRIC_ISTHMUS_CELLS	MYOF HYOU1 PPFIBP1 DDX18 SLTM NUCKS1 EIF4E2	2.63e-04	458	72	7	M40010
Coexpression	SCHAEFFER_PROSTATE_DEVELOPMENT_6HR_DN	HDAC4 ECD ARID5B NUCKS1 CHD9 ST13 THRAP3	2.96e-04	467	72	7	M1347
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_1000	WASHC4 ATRX MAP4 NBEAL1 ARID5B CHD9 STK39 HERC1 THOC2 THRAP3 ESF1 HDAC2 AHNAK2	1.87e-06	790	71	13	gudmap_developingGonad_e16.5_epididymis_1000
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_top-relative-expression-ranked_1000	WASHC4 ATRX MAP4 NBEAL1 ARID5B CHD9 STK39 HERC1 THOC2 THRAP3 ESF1 HDAC2 AHNAK2	2.12e-06	799	71	13	gudmap_developingGonad_e18.5_epididymis_1000
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_top-relative-expression-ranked_1000	PTPRG ATRX MAP4 NBEAL1 MATR3 ARID5B CHD9 STK39 HERC1 THOC2 THRAP3 ESF1 HDAC2	2.28e-06	804	71	13	gudmap_developingGonad_e12.5_ovary_1000
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_1000	HYOU1 ATRX MAP4 MATR3 ARID5B CHD9 STK39 CHGB HERC1 THOC2 THRAP3 ESF1 HDAC2	2.34e-06	806	71	13	gudmap_developingGonad_e12.5_epididymis_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#4	CASC3 UBE2O ATRX PCLO MATR3 SEC62 SENP6 CHD9 GPATCH8 EP300 ESF1	4.25e-06	595	71	11	Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K4
CoexpressionAtlas	DevelopingGonad_e14.5_ ovary_emap-6699_k-means-cluster#3_top-relative-expression-ranked_1000	ATRX MAP4 NBEAL1 CHD9 STK39 THOC2 HDAC2	1.02e-05	225	71	7	gudmap_developingGonad_e14.5_ ovary_1000_k3
CoexpressionAtlas	DevelopingGonad_P2_epididymis_emap-30199_top-relative-expression-ranked_1000	WASHC4 ATRX MAP4 NBEAL1 MATR3 ARID5B CHD9 HERC1 THOC2 THRAP3 ESF1 AHNAK2	1.20e-05	797	71	12	gudmap_developingGonad_P2_epididymis_1000
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_top-relative-expression-ranked_1000	WASHC4 ATRX MAP4 NBEAL1 MATR3 ARID5B CHD9 HERC1 THOC2 THRAP3 ESF1 HDAC2	1.26e-05	801	71	12	gudmap_developingGonad_e14.5_ epididymis_1000
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_k-means-cluster#4_top-relative-expression-ranked_1000	WASHC4 NBEAL1 STK39 HERC1 THOC2	1.84e-05	97	71	5	gudmap_developingGonad_e18.5_epididymis_1000_k4
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500_K1	PSIP1 ATRX MTRES1 SLTM PINX1 CHD9 MTREX SLC4A4 ADNP THOC2 PHIP THRAP3 ESF1 HDAC2	5.27e-05	1241	71	14	facebase_RNAseq_e10.5_MandArch_2500_K1
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_k-means-cluster#4_top-relative-expression-ranked_1000	ATRX NBEAL1 STK39 HERC1 THOC2	6.71e-05	127	71	5	gudmap_developingGonad_e16.5_epididymis_1000_k4
CoexpressionAtlas	DevelopingGonad_e18.5_ovary_emap-12283_k-means-cluster#2_top-relative-expression-ranked_1000	WASHC4 ATRX MAP4 NBEAL1 STK39 THOC2	7.31e-05	210	71	6	gudmap_developingGonad_e18.5_ovary_1000_k2
CoexpressionAtlas	BM Top 100 - dorsal root ganglia	NEFH MAP4 AHNAK2 POLR3G	9.42e-05	71	71	4	BM Top 100 - dorsal root ganglia
CoexpressionAtlas	DevelopingGonad_e16.5_ovary_emap-9563_k-means-cluster#2_top-relative-expression-ranked_1000	ATRX MAP4 CHD9 STK39 THOC2 HDAC2	1.20e-04	230	71	6	gudmap_developingGonad_e16.5_ovary_1000_k2
CoexpressionAtlas	DevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#3_top-relative-expression-ranked_1000	HYOU1 ATRX MAP4 ARID5B CHD9 STK39	2.29e-04	259	71	6	gudmap_developingGonad_e12.5_epididymis_k3_1000
CoexpressionAtlas	FacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5	CASC3 UBE2O ATRX SLTM CHD9 MTREX ADNP PHIP ESF1	2.40e-04	629	71	9	Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3	PSIP1 ATRX TLE4 SLTM PINX1 CHD9 MTREX ADNP THOC2 PHIP THRAP3 TP53BP1 ESF1	2.40e-04	1257	71	13	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500	PSIP1 ATRX MTRES1 SLTM PINX1 CHD9 MTREX SLC4A4 ADNP THOC2 PHIP THRAP3 ESF1 HDAC2	3.10e-04	1468	71	14	facebase_RNAseq_e10.5_MandArch_2500
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_k-means-cluster#3_top-relative-expression-ranked_1000	ATRX MAP4 NBEAL1 CHD9 HERC1 THOC2	3.16e-04	275	71	6	gudmap_developingGonad_e14.5_ epididymis_1000_k3
CoexpressionAtlas	DevelopingKidney_e15.5_cortic collect duct_emap-28132_top-relative-expression-ranked_500	WASHC4 RHPN2 NBEAL1 MED12L IGSF5 SLC4A4 PHIP	3.23e-04	390	71	7	gudmap_developingKidney_e15.5_cortic collect duct_500
CoexpressionAtlas	DevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#3_top-relative-expression-ranked_1000	PTPRG ATRX MAP4 ARID5B CHD9 STK39	3.29e-04	277	71	6	gudmap_developingGonad_e12.5_ovary_k3_1000
CoexpressionAtlas	FacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3	PSIP1 PCLO SLTM PINX1 MAGI3 PHIP THRAP3 ESF1	3.92e-04	532	71	8	Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlas	facebase_RNAseq_e10.5_NeuroEpith_central_2500_K4	PSIP1 ATRX TLE4 SPTBN2 SLTM CHD9 STK39 CHGB GPATCH8 PHIP THRAP3 TP53BP1 ESF1	5.50e-04	1370	71	13	facebase_RNAseq_e10.5_NeuroEpith_central_2500_K4
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX NBEAL1 MATR3 SENP6 CHD9 SLC4A4 THRAP3 HP1BP3	6.86e-10	191	70	8	60c986d2dcbc19d9338c03da6cb5e1d92fd48f8e
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX NBEAL1 MATR3 SENP6 CHD9 SLC4A4 THRAP3 HP1BP3	6.86e-10	191	70	8	973117730d6ba5f127e7a0bfabfd0ff2ca7ac131
ToppCell	H1299-infected-SARSCoV2\|infected / Cell line, Condition and Strain	NEFH PSIP1 ATRX DDX18 SLTM THOC2 PHIP ESF1	8.77e-10	197	70	8	0fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCell	droplet-Tongue-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX SEC62 ARID5B SLTM SENP6 PHIP ESF1	1.91e-08	188	70	7	d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX NBEAL1 MATR3 SENP6 CHD9 SLC4A4 HP1BP3	2.13e-08	191	70	7	09db184cb90fe282a14474d7217068c58092c6f8
ToppCell	control-Epithelial-Secretory\|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	MYOF NBEAL1 CHD9 RAI14 STK39 SLC4A4 HP1BP3	2.82e-08	199	70	7	262e5b8a52c8ddb0b47048c786e8bdb7158e1b9a
ToppCell	droplet-Marrow-nan-3m\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX MATR3 CHD9 THRAP3 EP300 HP1BP3	4.55e-07	184	70	6	1154a5ad7b8512272b7476f949ddac350910bfb7
ToppCell	10x3'2.3-week_12-13-Lymphocytic_B-B_lineage-pro_B_progenitor\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	PSIP1 TLE4 ARID5B CHD9 ST13 HP1BP3	5.49e-07	190	70	6	f623f0bdece6002b68ac2207e99408b24a2b1194
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	MTIF3 ATRX PCLO MATR3 ARID5B NUCKS1	7.19e-07	199	70	6	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	control-Epithelial-Secretory\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	MYOF NBEAL1 CHD9 RAI14 STK39 HP1BP3	7.19e-07	199	70	6	3d01f90ffd271ca00129192787e4921bdca7e01e
ToppCell	megakaryocytic-CD34+_Megakaryoblast\|megakaryocytic / Lineage and Cell class	NBEAL1 DDX18 MED12L NUCKS1 ST13 HDAC2	7.19e-07	199	70	6	99a65887d3c8a2cde26693dd74404b101bba9d58
ToppCell	Fetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_2-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	PTPRG ABCA13 MATR3 STK39 SLC4A4	1.11e-05	186	70	5	acfa68a2afb7d2b51c9b469a1965fe5cc5d5e64e
ToppCell	Substantia_nigra-Neuronal\|Substantia_nigra / BrainAtlas - Mouse McCarroll V32	CLSTN3 PCLO SPTBN2 LRRC7 CHGB	1.11e-05	186	70	5	3f889083fcffe516388e9b03a5e23af2010ced33
ToppCell	facs-Lung-EPCAM-24m-Epithelial-Neuroendocrine\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CLSTN3 PCLO SPTBN2 NFASC CHGB	1.27e-05	191	70	5	501d4f6ad389d9ac5051d4247b9bd3da96f713f9
ToppCell	facs-Lung-EPCAM-24m-Epithelial-lung_neuroendocrine_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CLSTN3 PCLO SPTBN2 NFASC CHGB	1.27e-05	191	70	5	8e06cc61eaff1796c2ce014074029408ba88d561
ToppCell	COVID-19_Severe\|World / Disease condition and Cell class	PSIP1 NBEAL1 MATR3 ARID5B HP1BP3	1.43e-05	196	70	5	450ac2aff89c5ca73b8bfbc80663e03be066931f
ToppCell	(08)_PNEC\|World / shred by cell type and Timepoint	NEFH CLSTN3 PCLO NFASC CHGB	1.43e-05	196	70	5	2ee37155c03cd5009427a4bffe6c80ed2ac6939e
ToppCell	5'-Airway_Nasal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.2.0\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	ERICH3 ABCA13 SPTBN2 STK39 AHNAK2	1.47e-05	197	70	5	5c4cee914baf7cb43e9cb99cc9e3ae823856dc15
ToppCell	10x3'2.3-week_14-16-Lymphocytic_B-B_lineage-pre_pro_B_progenitor\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	PSIP1 TLE4 ARID5B NUCKS1 CHD9	1.51e-05	198	70	5	8aa4149d2c1cec73cfd654db093252ec8ec5ef68
ToppCell	(09)_Interm._secr.>cil.-(2)_GFP_FOXI1\|(09)_Interm._secr.>cil. / shred by cell type by condition	MTIF3 ATRX MATR3 ADNP THOC2	1.54e-05	199	70	5	fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCell	NS-control-d_0-4-Epithelial-Secretory\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	MYOF CHD9 RAI14 SLC4A4 HP1BP3	1.54e-05	199	70	5	32bdfff40fd442b88489c8b0f79af3927a51a03c
ToppCell	Frontal_cortex-Neuronal\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	CLSTN3 UBE2O PCLO MATR3 CHGB	1.54e-05	199	70	5	f88039d862f3bfa01dc39d2de4f3f548dc5a0e61
ToppCell	Striatum-Neuronal\|Striatum / BrainAtlas - Mouse McCarroll V32	NEFH CLSTN3 PCLO CHGB HERC1	1.58e-05	200	70	5	c888fd487990cad482a4ca47601cdebc0ca3f3ce
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW23-Neuronal-Cortical_neuron\|GW23 / Sample Type, Dataset, Time_group, and Cell type.	MAP4 MATR3 NFASC LRRC7 ADNP	1.58e-05	200	70	5	7bba2ff09349c8db3d1ccf53520b12cbf7b0abac
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-10w\|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.	FAM133A TLE4 PCLO MATR3 CHD9	1.58e-05	200	70	5	ac0e023dbb383bbc46c5cc525431778be8f7ef46
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c06-NR4A2\|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)	UBE2O PSIP1 CHGB THRAP3	9.65e-05	152	70	4	5adcdf93fd3ca066402aaaf308c363e4648f871d
ToppCell	Fetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	PCLO SPTBN2 PINX1 CHGB	1.15e-04	159	70	4	7747cef94c55144fddcd024a7495318357f1351b
ToppCell	droplet-Marrow-BM_(NON-STC)-30m-Myeloid-granulocyte\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	UBE2O ABCA13 STK39 SLC22A20P	1.32e-04	165	70	4	9acf03b5a20170721380045b5c268825e8f315dd
ToppCell	Cerebellum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)\|Cerebellum / BrainAtlas - Mouse McCarroll V32	NEFH CLSTN3 SPTBN2 ADNP	1.39e-04	167	70	4	9efb9511a211d0824bb97f82c1a5860c43d2138f
ToppCell	Cerebellum-Neuronal-Inhibitory\|Cerebellum / BrainAtlas - Mouse McCarroll V32	NEFH CLSTN3 SPTBN2 ADNP	1.39e-04	167	70	4	904c613aac3f9919a432b110bb1dcc832b5aec0a
ToppCell	10x_3'_v3-blood_(10x_3'_v3)-hematologic-hematopoietic_progenitor-hematopoietic_stem_cell\|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	FAM133A PCLO SPTBN2 MED12L	1.49e-04	170	70	4	5bb577e2c4bd275fbe4ee23ff8c007b2fcb90e56
ToppCell	10x_3'_v3-blood_(10x_3'_v3)-hematologic-hematopoietic_progenitor\|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	FAM133A PCLO SPTBN2 MED12L	1.62e-04	174	70	4	66df78280f657978c4a568010ae7d7943869af90
ToppCell	3'-Pediatric_IBD-SmallIntestine-Epithelial-neuro-epithelial-N_cells_(NTS+)\|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract	ERICH3 PCLO IGSF5 CHGB	1.66e-04	175	70	4	97a58bc6ed2e8e359283d4214172c990c6e3755e
ToppCell	droplet-Heart-nan-3m\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX MATR3 CHD9 THRAP3	1.70e-04	176	70	4	749b47eac5436fa34e0d243ffbc6f1897f4e431e
ToppCell	5'-Adult-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	PTPRG PPFIBP1 SCN7A NFASC	1.73e-04	177	70	4	bd602db857f37869ef76d14c05ef522c509f08ee
ToppCell	5'-GW_trimst-2-SmallIntestine-Epithelial-neuro-epithelial-M/X_cells_(MLN/GHRL+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	ERICH3 PCLO SPTBN2 CHGB	1.89e-04	181	70	4	cb17c904ab86d56dd30cac9b61acbb3b76f84ded
ToppCell	Fetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_1/2_(AT1/AT2-like)-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	MYOF ABCA13 MATR3 STK39	1.89e-04	181	70	4	576da14ab3107f89e1f44a4a439d1bef5bb42370
ToppCell	wk_20-22-Hematologic-Meg-ery-Definitive_erythroblast\|wk_20-22 / Celltypes from embryonic and fetal-stage human lung	DENND4A UBE2O HERC1 EP300	1.93e-04	182	70	4	0c77ef4556c1d1512ebe9077df858b28f9e38dd5
ToppCell	droplet-Marrow-nan-3m-Hematologic-nan\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX SENP6 CHD9 HP1BP3	1.93e-04	182	70	4	e78ba2c5cae480c16a596ce7c3bf2d480becacf4
ToppCell	droplet-Marrow-nan-3m-Hematologic\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX SENP6 CHD9 HP1BP3	1.93e-04	182	70	4	1710eab3037a87609d21838be2d2d29c3bc36651
ToppCell	LV-07._Pericyte\|World / Chamber and Cluster_Paper	NBEAL1 SCN7A NFASC STK39	1.97e-04	183	70	4	273db6a3b00a93ca852498471187b642b5368185
ToppCell	COVID-19_Mild-NK_activated\|COVID-19_Mild / Disease condition and Cell class	ERICH3 WASHC4 MATR3 MTREX	1.97e-04	183	70	4	22bd05135906d0ecc4ba8c2e0a666093d1bf3b8f
ToppCell	COVID-19_Moderate-HSPC\|World / disease group, cell group and cell class	FAM133A PPFIBP1 SPTBN2 MED12L	2.01e-04	184	70	4	ccc93babe1fcdeb66b78e1d8414357877a7c45bd
ToppCell	ILEUM-inflamed-(5)_Plasma-(5)_IgM_plasma_cells\|(5)_Plasma / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	DDX18 SEC62 GPATCH8 ST13	2.05e-04	185	70	4	26ea60b6392410fab048f2e406a9860a018429cc
ToppCell	COVID-19_Moderate-HSPC\|COVID-19_Moderate / disease group, cell group and cell class	FAM133A PPFIBP1 SPTBN2 MED12L	2.05e-04	185	70	4	cacc6ab5f26f6c803894567fb838ea06eaa7efe5
ToppCell	LV-07._Pericyte\|LV / Chamber and Cluster_Paper	NBEAL1 SCN7A NFASC STK39	2.05e-04	185	70	4	acb38eba871ec72f2a8136a33b87d33b8c85465d
ToppCell	NS-critical-LOC-Epithelial-Basal\|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	PPFIBP1 PINX1 RAI14 ESF1	2.10e-04	186	70	4	c28f62524637c7eb9c43c9ec38fb12dfec6f5566
ToppCell	wk_15-18-Epithelial-PNS-MFNG+_DBH+_neuron\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	PCLO SPTBN2 NFASC CHGB	2.10e-04	186	70	4	72f7427d62d65e37bb0bf99229a1b75df081a128
ToppCell	Cerebellum-Neuronal\|Cerebellum / BrainAtlas - Mouse McCarroll V32	NEFH CLSTN3 MATR3 NUCKS1	2.14e-04	187	70	4	61b9d6eb131a674598aa8409d7fa909c8765442d
ToppCell	Control-Fibroblasts-Alveolar_FB\|Control / group, cell type (main and fine annotations)	PTPRG SCN7A NFASC CAB39L	2.14e-04	187	70	4	92d468dde81125d51daf7abd4703741abe1ab91c
ToppCell	10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	DENND4A HERC1 MED13L TP53BP1	2.18e-04	188	70	4	ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell	10x5'v1-week_17-19-Lymphocytic_B-B_lineage-pre_pro_B_progenitor\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	PSIP1 CHD9 ST13 HDAC2	2.18e-04	188	70	4	9858940c616e43441644c5a3bea8d832ee4daf79
ToppCell	Adult-Epithelial-alveolar_epithelial_cell_type_2-D175\|Adult / Lineage, Cell type, age group and donor	PTPRG ABCA13 PCLO SLC4A4	2.18e-04	188	70	4	ec38def1fdbb34ed9b30244806975bd5a4370164
ToppCell	facs-Brain_Myeloid-Striatum-3m-Myeloid-nan\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	WASHC4 HYOU1 MED12L MTREX	2.23e-04	189	70	4	6dd4ec5ce4beb856f0d2d1654e3c4676d1d63736
ToppCell	COVID-19_Severe-HSPC\|World / disease group, cell group and cell class	FAM133A PPFIBP1 PCLO MED12L	2.23e-04	189	70	4	555c0b13f1508b9e3712b36d77144e73e828bc76
ToppCell	facs-Brain_Myeloid-Striatum-3m-Myeloid\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	WASHC4 HYOU1 MED12L MTREX	2.23e-04	189	70	4	3ae479ec7e00c57127cbe51a398329b10ca9848c
ToppCell	ILEUM-inflamed-(5)_Plasma-(5)_IgA_plasma_cells\|(5)_Plasma / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	ATRX DDX18 SEC62 ARID5B	2.23e-04	189	70	4	a0634d72bfdd5f93877724ed6480b50a3a046f71
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Neuronal-nan\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CLSTN3 PCLO SPTBN2 CHGB	2.23e-04	189	70	4	f57200c93d39c9bce1adba0a6a1c178c028dd86b
ToppCell	facs-Brain_Myeloid-Striatum-3m-Myeloid-microglial_cell\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	WASHC4 HYOU1 MED12L MTREX	2.23e-04	189	70	4	875df61ee48baa5142ba4d2427bdec1c53e5a828
ToppCell	facs-Brain_Myeloid-Striatum-3m\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	WASHC4 HYOU1 MED12L MTREX	2.23e-04	189	70	4	97ef5215d841ff366a3e3682cd9bd04100cbfde0
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	MYOF PTPRG ARID5B STK39	2.27e-04	190	70	4	bf4511395fa97efd1c1cd17cc9bebb0271ee7f0e
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Thick_Ascending_Limb_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	MYOF PTPRG ARID5B STK39	2.27e-04	190	70	4	b6b8964b4910083499681b5fdf554e127b6a4c4e
ToppCell	Globus_pallidus-Neuronal\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	CLSTN3 SPTBN2 LRRC7 CHGB	2.27e-04	190	70	4	416de85d8841dac883faa6f5339b2fb461a09e82
ToppCell	Control-Fibroblasts\|Control / group, cell type (main and fine annotations)	PTPRG SCN7A NFASC CAB39L	2.27e-04	190	70	4	3a42a9b98d954685d38a741f44545898d0e3e9ce
ToppCell	10x5'v1-week_12-13-Lymphocytic_B-B_lineage-pro_B_progenitor\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	PPFIBP1 TLE4 ARID5B CHD9	2.32e-04	191	70	4	054fa0493b00149313c243d39cf39a264044f074
ToppCell	Children_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_2\|Children_(3_yrs) / Lineage, Cell type, age group and donor	PTPRG MAGI3 RAI14 SLC4A4	2.32e-04	191	70	4	a0332a4ef629510fb313ec119195c44a3f704a80
ToppCell	nucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-AF1\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	PTPRG SCN7A NFASC CAB39L	2.32e-04	191	70	4	6688cee34beee4f151ac17fccbc9c26a9aad72e1
ToppCell	human_hepatoblastoma-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	MAGI3 MED13L MTREX PHIP	2.36e-04	192	70	4	916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell	Epithelial-alveolar_epithelial_cell_type_2\|World / Lineage, Cell type, age group and donor	PTPRG MAGI3 RAI14 SLC4A4	2.36e-04	192	70	4	58c3737be7acce39fd2b91d70d6d7b2bbaa4f710
ToppCell	nucseq-Mesenchymal-Fibroblastic-Fibroblastic_2\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	PTPRG SCN7A NFASC CAB39L	2.36e-04	192	70	4	99ce9e3c4c50cf64ebb62145f2b5420efa0db309
ToppCell	facs-Aorta-Heart-3m\|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PTPRG ATRX MATR3 MTREX	2.36e-04	192	70	4	1ccc47792edf9ee23501c8e2165d11271636b66a
ToppCell	nucseq-Epithelial-Epithelial_Alveolar-AT2-AT2\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	PTPRG MAGI3 RAI14 SLC4A4	2.41e-04	193	70	4	fd4d3c0d7caf8a2fff5b3d901fc28d19a8163cdf
ToppCell	facs-Brain_Non-Myeloid-Cortex-24m-Neuronal\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NEFH CLSTN3 PCLO SPTBN2	2.41e-04	193	70	4	be28070c049e7cb68bcd54f582226eb2f5e4bc1c
ToppCell	Posterior_cortex-Neuronal\|Posterior_cortex / BrainAtlas - Mouse McCarroll V32	CLSTN3 ATRX MATR3 HERC1	2.41e-04	193	70	4	b4989e3436e84dbec3789b46057e0f7a0ebf09d4
ToppCell	facs-Brain_Non-Myeloid-Cortex-24m-Neuronal-nan\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NEFH CLSTN3 PCLO SPTBN2	2.41e-04	193	70	4	0c652ebe22ce5d2927599dd97ef1920547858395
ToppCell	facs-Brain_Non-Myeloid-Cortex-24m-Neuronal-neuron\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NEFH CLSTN3 PCLO SPTBN2	2.41e-04	193	70	4	8689a70a33a7c3823dc647d41ac0160e7c3ae396
ToppCell	wk_08-11-Hematologic-Meg-ery-Definitive_erythroblast\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	DENND4A UBE2O HERC1 EP300	2.41e-04	193	70	4	be75abfdf5301cf33df8ee9ed92504d44fdf19a6
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	MAGI3 MED13L MTREX PHIP	2.41e-04	193	70	4	e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCell	nucseq-Epithelial-Epithelial_Alveolar-AT2\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	PTPRG MAGI3 RAI14 SLC4A4	2.41e-04	193	70	4	f3cc7cfdbc164a4ed42f87647111522b7d393bcb
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Neuronal\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CLSTN3 PCLO SPTBN2 CHGB	2.41e-04	193	70	4	5fb7808dd971c1cc64c2bd4f8f1de646fb2d77f4
ToppCell	droplet-Limb_Muscle-MUSCLE\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX ARID5B SENP6 THRAP3	2.46e-04	194	70	4	e3d63874111d1e8da3977329426e4dcf68d6de87
ToppCell	Hippocampus-Neuronal\|Hippocampus / BrainAtlas - Mouse McCarroll V32	CLSTN3 UBE2O PCLO HERC1	2.46e-04	194	70	4	8aeb347b3024354c9505f4f0fddf0b843489dc6b
ToppCell	Smart-start-Cell-Wel_seq-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia/MHC-E\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ERICH3 DDX18 SEC62 ESF1	2.46e-04	194	70	4	8985095f291c1b54e45f4edece49aa26e8c8b732
ToppCell	droplet-Marrow-nan-3m-Myeloid-granulocytopoietic_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ATRX MATR3 CHD9 THRAP3	2.46e-04	194	70	4	8ef0b71fef5b84cfd04973f891215333e7035d1d
ToppCell	COVID-19_Convalescent-PLT_4\|COVID-19_Convalescent / Disease Group and Platelet Clusters	DENND4A SENP6 CHD9 THOC2	2.46e-04	194	70	4	ce1fad4e76a87f0c35e430ed1f2262395df882fd
ToppCell	PCW_07-8.5-Epithelial-Epithelial_neuroendo\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	ERICH3 PCLO NFASC CHGB	2.46e-04	194	70	4	b30379f8dc41c86c746af9930541fbb4819d8fa0
ToppCell	NS-moderate-d_16-33-Epithelial-Secretory\|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	MYOF MAGI3 RAI14 SLC4A4	2.56e-04	196	70	4	70384c1da9baed843f414cfd1403ddd586a2db07
ToppCell	Bronchial-NucSeq\|Bronchial / Cell types per location group and 10X technology with lineage, and cell group designations	PTPRG MAGI3 STK39 MED13L	2.56e-04	196	70	4	ab53c742866945545a92e2e61850d63c80d9a2a6
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic\|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)	PSIP1 MATR3 NUCKS1 GPATCH8	2.56e-04	196	70	4	a9157809122e6fc5783a291522f103bef30943e4
ToppCell	primary_visual_cortex-Neuronal\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	CLSTN3 PCLO MATR3 CHGB	2.56e-04	196	70	4	8efc2b3a95f57c31be203ac781b2098d4909297f
ToppCell	critical-Epithelial-Secretory\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	MYOF NBEAL1 SLC4A4 HP1BP3	2.56e-04	196	70	4	dbf14f5851c2b779a8b35e820c4584ea9096e49d
ToppCell	nucseq-Mesenchymal-Fibroblastic\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	PTPRG SCN7A NFASC CAB39L	2.56e-04	196	70	4	7d8505dac15fa59935ccf592afc54b04c4c6554f
ToppCell	Fibroblasts-DKK3+_Fibroblasts\|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues	MYOF PPFIBP1 CAB39L AHNAK2	2.66e-04	198	70	4	4f4632f26a2043c5e4ab89031b4229b5dca1bd48
ToppCell	TCGA-Skin-Metastatic-Melanoma\|TCGA-Skin / Sample_Type by Project: Shred V9	DENND4A ATRX NBEAL1 PHIP	2.66e-04	198	70	4	af4fb9eb2295c7b90624b38ba25619aa15254efa
ToppCell	TCGA-Skin-Metastatic\|TCGA-Skin / Sample_Type by Project: Shred V9	DENND4A ATRX NBEAL1 PHIP	2.66e-04	198	70	4	ad39cce004867f083f8da1954e0cf5a263815184
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-6_mon-Neuronal\|6_mon / Sample Type, Dataset, Time_group, and Cell type.	PCLO LRRC7 CHGB HDAC2	2.66e-04	198	70	4	076c862f2a723f0361749377561cae902068b1a0
ToppCell	TCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma\|TCGA-Skin / Sample_Type by Project: Shred V9	DENND4A ATRX NBEAL1 PHIP	2.66e-04	198	70	4	62cbf4b29e8af4983fb47a17f96da62682a5137e
ToppCell	nucseq-Mesenchymal\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	PTPRG SCN7A NFASC CAB39L	2.66e-04	198	70	4	8f52243ca8b9ba68a75ae411506a3a6de258eb97
ToppCell	Brain_organoid-organoid_Kanton_Nature-Organoid-2M-Neuronal-cortical_neurons_1\|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.	PCLO NFASC LRRC7 CHGB	2.66e-04	198	70	4	d81f35c0066558ff96dd06f58fca72cd82e681e8
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_basal-Suprabasal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	MYOF ABCA13 SLC4A4 AHNAK2	2.66e-04	198	70	4	19d8ff3a4f911b13ecc34844202925475ad4d2ab
Drug	Nalidixic acid sodium salt hydrate; Down 200; 14.6uM; MCF7; HT_HG-U133A	CYLC1 MYOF HDAC4 MAP4 PPFIBP1 HP1BP3 POLR3G	2.81e-06	198	71	7	2297_DN
Disease	pulmonary hypertension (is_marker_for)	HDAC4 TP53BP1 HDAC2	4.80e-04	64	70	3	DOID:6432 (is_marker_for)
Disease	bacteriemia	PTPRG MAGI3	7.37e-04	17	70	2	EFO_0003033
Disease	alpha fetoprotein measurement	CHD9 CAB39L TP53BP1	1.75e-03	100	70	3	EFO_0010583
Disease	Adenoid Cystic Carcinoma	ATRX ARID5B EP300	1.75e-03	100	70	3	C0010606
Disease	amyotrophic lateral sclerosis (is_marker_for)	HDAC4 MTREX	2.16e-03	29	70	2	DOID:332 (is_marker_for)

Protein segments in the cluster

Peptide	Gene	Start	Entry
EDEKEKTFTKDSDKD	PTPRG	391	P23470
QDKKTDKASEEVSKS	CAB39L	31	Q9H9S4
SESEEKLDQKEDGSK	ADNP	921	Q9H2P0
EKSGKHVSAEEKEKD	ERICH3	686	Q5RHP9
ESTDVTKGDSKNAKK	EP300	1536	Q09472
EEKNKEKEKGDNSTD	CLSTN3	496	Q9BQT9
GTVKSSKDTDVEKEE	ABCA13	4691	Q86UQ4
KKGEDKTTQKDTTDS	CYLC2	116	Q14093
DTTDSESELKQGKKD	CYLC2	126	Q14093
VGKKESESVSKEEKE	ECD	431	O95905
SEENTKEEKPDSKKV	ST13P5	51	Q8NFI4
SEENTKEEKPDSKKV	ST13	51	P50502
EENKSSEETKKDEKD	HP1BP3	106	Q5SSJ5
TSTEDIQEEKDKKGS	DENND4A	921	Q7Z401
EDTKKNSDEKTDEEK	NBEAL1	1301	Q6ZS30
ESSSKLEEDKDKKIN	RAI14	871	Q9P0K7
EDSEDSEDKDVKTKK	NUCKS1	56	Q9H1E3
SSSDSEDEEKKQGKR	FAM133A	116	Q8N9E0
KNKEKGKESAVASTE	HDAC4	156	P56524
SDKKSKTDGSQKTES	MATR3	606	P43243
QKTESSTEGKEQEEK	MATR3	616	P43243
DQGKTTTDEEKKTKG	MED12L	1756	Q86YW9
GTEKDSLKKNKSEDG	MED13L	736	Q71F56
LDVDEKTGNSESKKK	MAP4	51	P27816
SKEVSENEKGKKVTT	MAGI3	1376	Q5TCQ9
KKETSDGEKETIQKT	PPFIBP1	471	Q86W92
KDKKESTDESEVDKT	LRRC7	661	Q96NW7
EKKVDSSGETEKKDF	HERC1	1876	Q15751
NVEEDGKTKKSQKDD	ESF1	561	Q9H501
EEKSSKAESGEKSKK	GPATCH8	696	Q9UKJ3
STAEDTQNEGKKTKK	MTIF3	56	Q9H2K0
KEKTEKEDDKSDTSS	PCLO	1336	Q9Y6V0
SSSTESQKKEETKGK	PCLO	1586	Q9Y6V0
GQETTDSSDKKEKKS	PINX1	96	Q96BK5
DSSDKKEKKSFSLEE	PINX1	101	Q96BK5
ESGDSKDERKDTKKD	CYLC1	336	P35663
KEADKGTSKAKAEED	KLHL40	281	Q2TBA0
KKAKTENKGKSEEES	DDX18	126	Q9NVP1
ENKGKSEEESAETTK	DDX18	131	Q9NVP1
KAEKAEKSSSTDQKD	NEFH	996	P12036
VKKDKEETEGNESSE	NFASC	1321	O94856
EESEAKTGQEESKAK	ADAM30	751	Q9UKF2
ETSEDDKKQSKKGTE	ATRX	976	P46100
DKKGSDSKESEGKTE	CHD9	2741	Q3L8U1
KATEKENGDKSEAQK	HYOU1	651	Q9Y4L1
SEKEKTNKETETESG	IGSF5	321	Q9NSI5
DAVNSSTKEEKGEEK	CASC3	121	O15234
STKEEKGEEKPDTKS	CASC3	126	O15234
DIKESLESEGKNSKK	ATE1	146	O95260
VKEEDKSKDNSGEKT	HDAC2	461	Q92769
KSKDNSGEKTDTKGT	HDAC2	466	Q92769
KDGEKEKTERDKNQS	EIF4E2	26	O60573
KEGSSKKHVEEKSEE	SLC22A20P	526	A6NK97
KDVKDKETTENENTK	CHGB	66	P05060
EETEAKEEKSKGQKK	ARHGAP30	711	Q7Z6I6
AKSEENTKEEKPDSK	ST13P4	46	Q8IZP2
KESKDSKTSSKDDKG	SLTM	356	Q9NWH9
TKSTKKSLQKVDEED	MTRES1	91	Q9P0P8
AIDDDDKTDKTKKIS	RHPN2	621	Q8IUC4
KSKSTEDGAELEEQK	AHNAK2	5711	Q8IVF2
SGKEKASEQESEGSK	ARID5B	1041	Q14865
SESDIITEEDKSKKK	PSIP1	206	O75475
NTDKEKIKEKGSFSD	THRAP3	366	Q9Y2W1
KEFQSDGSKQEDKEK	THOC2	461	Q8NI27
DSTTAAGTKKDKEKD	MTREX	16	P42285
AEDDQSEASGKKSVK	NGDN	151	Q8NEJ9
KNKTKKAESSSDEEE	PHIP	871	Q8WWQ0
DEKSETKKQQKSDSE	SEC62	296	Q99442
TKKQQKSDSEEKSDS	SEC62	301	Q99442
KSDSEEKSDSEKKED	SEC62	306	Q99442
SVETEDNKEKKSAKD	SPTBN2	166	O15020
SSESKKQKTEEKEIA	TLE4	226	Q04727
DKKGESKTKSEAESA	UBE2O	416	Q9C0C9
VDEDEDSETSKGKKL	SENP6	56	Q9GZR1
KSDEENEEKEGSKEK	POLR3G	156	O15318
QKEKEKEEDTSGNTT	TP53BP1	141	Q12888
EKKEKEEETKTSNGD	WASHC4	1146	Q2M389
KKKKGSLDSDNDDSD	SLC4A4	1021	Q9Y6R1
KDKEKSSGTEKNATE	SCN7A	806	Q01118
EKSEEGKAAFSQEKS	STK39	391	Q9UEW8
DTTEDGDEKSLEKQK	MYOF	1101	Q9NZM1