Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
Domain	Cadherin_tail	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	3.73e-05	37	193	5	PF15974
Domain	Cadherin_CBD	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	3.73e-05	37	193	5	IPR031904
Domain	Cadherin_C	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	6.98e-05	42	193	5	IPR032455
Domain	Cadherin_C_2	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	6.98e-05	42	193	5	PF16492
Domain	PH_dom-spectrin-type	SPTBN2 SPTBN5 PSD4	8.72e-05	9	193	3	IPR001605
Domain	Tob1/2	TOB2 TOB1	1.06e-04	2	193	2	IPR015676
Domain	FN3	EPHB3 SPEG OBSCN PTPRS COL6A3 OBSL1 MDGA1 TNXB LRIT1	1.34e-04	185	193	9	SM00060
Domain	FN3	EPHB3 SPEG OBSCN PTPRS COL6A3 OBSL1 MDGA1 TNXB LRIT1	2.32e-04	199	193	9	PS50853
Domain	BAT2_N	PRRC2C PRRC2B	3.17e-04	3	193	2	PF07001
Domain	BAT2_N	PRRC2C PRRC2B	3.17e-04	3	193	2	IPR009738
Domain	PRRC2	PRRC2C PRRC2B	3.17e-04	3	193	2	IPR033184
Domain	FN3_dom	EPHB3 SPEG OBSCN PTPRS COL6A3 OBSL1 MDGA1 TNXB LRIT1	3.33e-04	209	193	9	IPR003961
Domain	Cadherin_2	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	5.59e-04	65	193	5	PF08266
Domain	Cadherin_N	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	5.59e-04	65	193	5	IPR013164
Domain	2-Hacid_dh_C	GRHPR CTBP1	6.29e-04	4	193	2	PF02826
Domain	Mib_Herc2	HERC2 HECTD1	6.29e-04	4	193	2	IPR010606
Domain	Bile_Hydr_Trans	ACOT2 ACOT1	6.29e-04	4	193	2	PF04775
Domain	C5_MTASE_1	DNMT1 DNMT3B	6.29e-04	4	193	2	PS00094
Domain	C5_MTASE_2	DNMT1 DNMT3B	6.29e-04	4	193	2	PS00095
Domain	MIB_HERC2	HERC2 HECTD1	6.29e-04	4	193	2	PS51416
Domain	MIB_HERC2	HERC2 HECTD1	6.29e-04	4	193	2	PF06701
Domain	SAM_MT_C5	DNMT1 DNMT3B	6.29e-04	4	193	2	PS51679
Domain	2-Hacid_dh	GRHPR CTBP1	6.29e-04	4	193	2	PF00389
Domain	DNA_methylase	DNMT1 DNMT3B	6.29e-04	4	193	2	PF00145
Domain	D_2_HYDROXYACID_DH_1	GRHPR CTBP1	6.29e-04	4	193	2	PS00065
Domain	D_2_HYDROXYACID_DH_2	GRHPR CTBP1	6.29e-04	4	193	2	PS00670
Domain	D_2_HYDROXYACID_DH_3	GRHPR CTBP1	6.29e-04	4	193	2	PS00671
Domain	C5_MeTfrase	DNMT1 DNMT3B	6.29e-04	4	193	2	IPR001525
Domain	D-isomer_2_OHA_DH_cat_dom	GRHPR CTBP1	6.29e-04	4	193	2	IPR006139
Domain	C5_DNA_meth_AS	DNMT1 DNMT3B	6.29e-04	4	193	2	IPR018117
Domain	D-isomer_DH_CS	GRHPR CTBP1	6.29e-04	4	193	2	IPR029753
Domain	Thio_Ohase/aa_AcTrfase	ACOT2 ACOT1	6.29e-04	4	193	2	IPR006862
Domain	Acyl-CoA_thioEstase_long-chain	ACOT2 ACOT1	6.29e-04	4	193	2	IPR016662
Domain	PH	SPTBN2 DOK3 OBSCN ARHGEF16 NIBAN3 SPTBN5 ARHGAP23 PLEKHG2 ARAP3 PSD4	6.51e-04	278	193	10	SM00233
Domain	PH_domain	SPTBN2 DOK3 OBSCN ARHGEF16 NIBAN3 SPTBN5 ARHGAP23 PLEKHG2 ARAP3 PSD4	6.88e-04	280	193	10	IPR001849
Domain	Ig_I-set	CADM4 SPEG OBSCN PTPRS OBSL1 ICAM5 MDGA1 LRIT1	8.24e-04	190	193	8	IPR013098
Domain	I-set	CADM4 SPEG OBSCN PTPRS OBSL1 ICAM5 MDGA1 LRIT1	8.24e-04	190	193	8	PF07679
Domain	Cadherin_CS	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	9.45e-04	109	193	6	IPR020894
Domain	NEUZ	NEURL3 NEURL4	1.04e-03	5	193	2	SM00588
Domain	BAAT_C	ACOT2 ACOT1	1.04e-03	5	193	2	IPR014940
Domain	NHR	NEURL3 NEURL4	1.04e-03	5	193	2	PS51065
Domain	NHR_dom	NEURL3 NEURL4	1.04e-03	5	193	2	IPR006573
Domain	D-isomer_DH_NAD-bd	GRHPR CTBP1	1.04e-03	5	193	2	IPR006140
Domain	Neuralized	NEURL3 NEURL4	1.04e-03	5	193	2	PF07177
Domain	BAAT_C	ACOT2 ACOT1	1.04e-03	5	193	2	PF08840
Domain	CADHERIN_1	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	1.14e-03	113	193	6	PS00232
Domain	Cadherin	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	1.14e-03	113	193	6	PF00028
Domain	CADHERIN_2	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	1.19e-03	114	193	6	PS50268
Domain	-	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	1.19e-03	114	193	6	2.60.40.60
Domain	CA	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	1.25e-03	115	193	6	SM00112
Domain	Ser/Thr_kinase_AS	SPEG OBSCN TLK1 BMPR2 TTBK1 DSTYK WNK4 WNK2 PIM3 HASPIN PRKCG	1.26e-03	357	193	11	IPR008271
Domain	Cadherin-like	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	1.30e-03	116	193	6	IPR015919
Domain	PROTEIN_KINASE_ST	SPEG OBSCN TLK1 BMPR2 TTBK1 DSTYK WNK4 WNK2 PIM3 HASPIN PRKCG	1.40e-03	362	193	11	PS00108
Domain	Cadherin	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 DCHS1	1.42e-03	118	193	6	IPR002126
Domain	fn3	EPHB3 SPEG OBSCN PTPRS OBSL1 TNXB LRIT1	1.50e-03	162	193	7	PF00041
Domain	BTG_2	TOB2 TOB1	1.55e-03	6	193	2	PS01203
Domain	OSR1_C	WNK4 WNK2	1.55e-03	6	193	2	PF12202
Domain	SPOC_C	DIDO1 SPEN	1.55e-03	6	193	2	IPR012921
Domain	BTG_1	TOB2 TOB1	1.55e-03	6	193	2	PS00960
Domain	Kinase_OSR1/WNK_CCT	WNK4 WNK2	1.55e-03	6	193	2	IPR024678
Domain	Anti_prolifrtn	TOB2 TOB1	1.55e-03	6	193	2	IPR002087
Domain	btg1	TOB2 TOB1	1.55e-03	6	193	2	SM00099
Domain	BTG	TOB2 TOB1	1.55e-03	6	193	2	PF07742
Domain	SPOC	DIDO1 SPEN	1.55e-03	6	193	2	PF07744
Domain	TYR_PHOSPHATASE_1	DUSP23 PTPRN2 PTPRS DUSP4 DUSP6	1.98e-03	86	193	5	PS00383
Domain	TYR_PHOSPHATASE_dom	DUSP23 PTPRN2 PTPRS DUSP4 DUSP6	2.08e-03	87	193	5	IPR000387
Domain	TYR_PHOSPHATASE_2	DUSP23 PTPRN2 PTPRS DUSP4 DUSP6	2.08e-03	87	193	5	PS50056
Domain	Pkinase	SPEG OBSCN TLK1 BMPR2 TTBK1 DSTYK WNK4 WNK2 PIM3 HASPIN PRKCG	2.10e-03	381	193	11	PF00069
Domain	MeCpG-bd_2/3_C_dom	MBD3L5 MBD3L4	2.16e-03	7	193	2	IPR025884
Domain	MBD2/MBD3_p55-bd	MBD3L5 MBD3L4	2.16e-03	7	193	2	IPR032343
Domain	MBDa	MBD3L5 MBD3L4	2.16e-03	7	193	2	PF16564
Domain	MBD_C	MBD3L5 MBD3L4	2.16e-03	7	193	2	PF14048
Domain	PH_DOMAIN	SPTBN2 DOK3 OBSCN ARHGEF16 SPTBN5 ARHGAP23 PLEKHG2 ARAP3 PSD4	2.53e-03	279	193	9	PS50003
Domain	-	SPTBN2 DOK3 OBSCN ARHGEF16 NIBAN3 SPTBN5 ARHGAP23 FRMPD2 PLEKHG2 ARAP3 PSD4	2.56e-03	391	193	11	2.30.29.30
Domain	-	DUSP23 PTPRN2 PTPRS DUSP4 DUSP6	2.66e-03	92	193	5	3.90.190.10
Domain	PH	SPTBN2 DOK3 OBSCN ARHGEF16 SPTBN5 PLEKHG2 ARAP3 PSD4	2.68e-03	229	193	8	PF00169
Pubmed	Maturation of postnatally generated olfactory bulb granule cells depends on functional γ-protocadherin expression.	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	1.85e-08	15	203	5	23515096
Pubmed	A dual-activity topoisomerase complex regulates mRNA translation and turnover.	HEXA MGAT4B ANKRD9 SPEG OBSCN TMCO6 TLK1 PTPRS GLI1 SCN8A HERC2 HECTD1 WNK2 PRRC2B ATP13A1 CORO1B TFE3 ANO8 PIM3 INTS5 ARAP3 SNAPC4 SPEN ENDOG	3.68e-08	1105	203	24	35748872
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	MGAT4B RUSC2 MOGS PRRC2C DSTYK PRRC2B DNMT1 USP13 XRN2 ARHGAP23 OBSL1 DIDO1 ZNFX1 ARAP3 LRCH4 CCAR1 CDK5RAP1	3.22e-07	650	203	17	38777146
Pubmed	Interaction with protocadherin-gamma regulates the cell surface expression of protocadherin-alpha.	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	5.68e-07	28	203	5	15347688
Pubmed	Global changes in DNA methylation in Alzheimer's disease peripheral blood mononuclear cells.	DNMT1 DNMT3B APOE	7.80e-07	4	203	3	25452147
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	SPTBN2 LUZP1 PTPRN2 PTPRS PRRC2C HERC2 WNK2 PRRC2B DNMT1 DIDO1 ZNFX1 CORO1B ICAM5 YLPM1 DCHS1 LRP1 CCAR1 PRKCG CTBP1 NEURL4	1.08e-06	963	203	20	28671696
Pubmed	Functional significance of isoform diversification in the protocadherin gamma gene cluster.	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	1.56e-06	34	203	5	22884324
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	SPTBN2 STAU1 LRRC47 PRRC2C HERC2 HECTD1 PRRC2B DNMT1 XRN2 AHCTF1 NVL DIDO1 DDX27 YLPM1 CCAR1 SPEN	1.69e-06	653	203	16	22586326
Pubmed	HIC1 epigenetically represses CIITA transcription in B lymphocytes.	CIITA DNMT1 DNMT3B	1.94e-06	5	203	3	27720955
Pubmed	Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals.	ZC3H3 SPTBN5 PTPRN2 WNK2 COL6A3 NVL DIDO1 CTBP1	2.02e-06	142	203	8	19851296
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	PDE9A SPTBN2 TTC7B GRHPR HERC2 HECTD1 DNMT1 BRWD1 USP13 XRN2 ATP13A1 OBSL1 CHD9 ZNFX1 ACOT1 APOE SHROOM2 DDX27 YLPM1 LRP1 CCAR1 CERCAM CTBP1	2.05e-06	1285	203	23	35914814
Pubmed	Association of genetic variants with hemorrhagic stroke in Japanese individuals.	ZC3H3 SPTBN5 PTPRN2 WNK2 COL6A3 NVL DIDO1 CTBP1	2.13e-06	143	203	8	20198315
Pubmed	Sequential genome-wide CRISPR-Cas9 screens identify genes regulating cell-surface expression of tetraspanins.	FNBP1 CPAMD8 CATSPERE DOK3 PEX10 NSFL1C GLI1 KIF19 SCN8A GRIN3B KLHL33 RUNX3 LAP3 CNNM3 ARAP3 DNAJC11 PPP1R18 CERCAM	2.17e-06	832	203	18	36724073
Pubmed	Effect of atorvastatin on the expression of gamma-glutamyl transferase in aortic atherosclerotic plaques of apolipoprotein E-knockout mice.	GGT3P APOE GGT2P	3.87e-06	6	203	3	25326709
Pubmed	RIP140 directs histone and DNA methylation to silence Ucp1 expression in white adipocytes.	DNMT1 DNMT3B CTBP1	3.87e-06	6	203	3	17972916
Pubmed	A Human Tyrosine Phosphatase Interactome Mapped by Proteomic Profiling.	PPP2R2D ECI1 PGRMC1 LUZP1 DUSP23 PTPRN2 PTPRS EIF2B4 HECTD1 PRRC2B TBC1D15 DUSP4 DUSP6 OBSL1 DDX27 CNNM3 ARAP3 DNAJC11 LRP1	5.01e-06	974	203	19	28675297
Pubmed	Expression of the immunoglobulin superfamily cell adhesion molecules in the developing spinal cord and dorsal root ganglion.	CADM4 SPEG OBSCN PTPRS OBSL1 ICAM5 MDGA1 LRIT1	5.37e-06	162	203	8	25826454
Pubmed	A differential developmental pattern of spinal interneuron apoptosis during synaptogenesis: insights from genetic analyses of the protocadherin-gamma gene cluster.	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	5.82e-06	44	203	5	19029045
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	SPTBN2 GARS1 PGRMC1 LUZP1 STAU1 LRRC47 PHF2 MOGS STARD9 PRRC2C EIF2B4 HERC2 TAF10 PRRC2B DNMT1 ATP13A1 AHCTF1 OBSL1 DIDO1 CORO1B DDX27 YLPM1 CCAR1	5.96e-06	1371	203	23	36244648
Pubmed	Cell Types Promoting Goosebumps Form a Niche to Regulate Hair Follicle Stem Cells.	DHH GLI1 TH	6.74e-06	7	203	3	32679029
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	FNBP1 CPAMD8 PDE9A OBSCN ARHGEF16 PHF2 TLK1 BMPR2 PTPRN2 PTPRS EIF2B4 C1orf159 HECTD1 WNK2 FRMPD2 CHD9 ZSWIM6 SHROOM2 ANO8 LRP1 CCAR1 CDK5RAP1 CTBP1 TMEM63A	7.21e-06	1489	203	24	28611215
Pubmed	Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.	GARS1 NSFL1C MOGS HERC2 HECTD1 PRRC2B DNMT1 USP13 TBC1D15 ATP13A1 NVL DDX27 LAP3 DNAJC11 CCAR1 NEURL4	1.03e-05	754	203	16	33060197
Pubmed	Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.	PPP2R2D SPTBN2 LUZP1 PHF2 DUSP23 TTC7B PTPRN2 PTPRS NHS HERC2 PRRC2B DNMT1 DUSP4 DUSP6 DDX27 CNNM3 YLPM1 PPP1R18 NEURL4	1.42e-05	1049	203	19	27880917
Pubmed	Dnmt3b recruitment through E2F6 transcriptional repressor mediates germ-line gene silencing in murine somatic tissues.	DNMT1 DNMT3B MAEL	1.60e-05	9	203	3	20439742
Pubmed	Clustered gamma-protocadherins regulate cortical interneuron programmed cell death.	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	2.11e-05	57	203	5	32633719
Pubmed	Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.	LUZP1 LRRC47 PHF1 PRRC2C DNMT1 XRN2 AHCTF1 OBSL1 HASPIN CCAR1 CTBP1 SPEN	2.27e-05	469	203	12	27634302
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	SPTBN2 LUZP1 PRRC2C PRRC2B DNMT1 TBC1D15 AHCTF1 DIDO1 CORO1B APOE ICAM5 YLPM1 SPEN	2.32e-05	549	203	13	38280479
Pubmed	Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.	PPP2R2D SPR STAU1 LRRC47 TTC7B PRRC2C SCN8A HERC2 PRRC2B DNMT1 ARHGAP23 NVL	2.57e-05	475	203	12	31040226
Pubmed	Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.	HEXA SCARF2 EPX PTPRN2 WNK2 CCR10 TRIM39 SHROOM2 SPEN PRG4	2.62e-05	329	203	10	17474147
Pubmed	An Interaction Landscape of Ubiquitin Signaling.	MISP3 OTUD7B NSFL1C HERC2 HECTD1 DNMT1 USP13 TBC1D15 DTYMK NVL NEURL4 CAPN15	2.90e-05	481	203	12	28190767
Pubmed	Comparative influenza protein interactomes identify the role of plakophilin 2 in virus restriction.	STAU1 EIF2B4 TRIM41	3.12e-05	11	203	3	28169297
Pubmed	Association of DNMT1 and DNMT3B polymorphisms with breast cancer risk in Han Chinese women from South China.	DNMT1 DNMT3B	3.39e-05	2	203	2	23079992
Pubmed	Deregulation of DNMT1, DNMT3B and miR-29s in Burkitt lymphoma suggests novel contribution for disease pathogenesis.	DNMT1 DNMT3B	3.39e-05	2	203	2	25746661
Pubmed	Possible synergistic effect of apoE and LRP1 genotypes on metabolic syndrome development in Serbian patients.	APOE LRP1	3.39e-05	2	203	2	31538302
Pubmed	[Expression of DNA methyltransferases in salivary adenoid cystic carcinoma and its association with the CpG islands methylation of tumor suppressor genes].	DNMT1 DNMT3B	3.39e-05	2	203	2	17067458
Pubmed	Polymorphisms of APOE and LRP genes in Brazilian individuals with Alzheimer disease.	APOE LRP1	3.39e-05	2	203	2	18317248
Pubmed	Ectopic ERK expression induces phenotypic conversion of C10 cells and alters DNA methyltransferase expression.	DNMT1 DNMT3B	3.39e-05	2	203	2	22559742
Pubmed	DNA methyltransferases 1 and 3B are required for hepatitis C virus infection in cell culture.	DNMT1 DNMT3B	3.39e-05	2	203	2	23545144
Pubmed	Reduced neuronal signaling in the ageing apolipoprotein-E4 targeted replacement female mice.	APOE LRP1	3.39e-05	2	203	2	25301084
Pubmed	Acyl-CoA thioesterases belong to a novel gene family of peroxisome proliferator-regulated enzymes involved in lipid metabolism.	ACOT2 ACOT1	3.39e-05	2	203	2	11330065
Pubmed	DNA methyltransferase haplotype is associated with Alzheimer's disease.	DNMT1 DNMT3B	3.39e-05	2	203	2	25038421
Pubmed	DNMT1 and DNMT3b cooperate to silence genes in human cancer cells.	DNMT1 DNMT3B	3.39e-05	2	203	2	11932749
Pubmed	Blended phenotype of combination of HERC2 and AP3B2 deficiency and Angelman syndrome caused by paternal isodisomy of chromosome 15.	HERC2 AP3B2	3.39e-05	2	203	2	34042275
Pubmed	Effect of 50 Hz Extremely Low-Frequency Electromagnetic Fields on the DNA Methylation and DNA Methyltransferases in Mouse Spermatocyte-Derived Cell Line GC-2.	DNMT1 DNMT3B	3.39e-05	2	203	2	26339596
Pubmed	Low density lipoprotein receptor-related protein 1 dependent endosomal trapping and recycling of apolipoprotein E.	APOE LRP1	3.39e-05	2	203	2	22238606
Pubmed	Epigenetic Control of Apolipoprotein E Expression Mediates Gender-Specific Hematopoietic Regulation.	DNMT3B APOE	3.39e-05	2	203	2	26417967
Pubmed	Epigenetic regulation of DNA methyltransferases: DNMT1 and DNMT3B in gliomas.	DNMT1 DNMT3B	3.39e-05	2	203	2	21229291
Pubmed	DNMT1 and DNMT3B gene variants and their association with endometriosis in South Indian women.	DNMT1 DNMT3B	3.39e-05	2	203	2	34697715
Pubmed	[Effects of Dnmt1 and Dnmt3b in mucoepidermoid carcinoma of salivary glands].	DNMT1 DNMT3B	3.39e-05	2	203	2	30411123
Pubmed	Orthologous relationship of obscurin and Unc-89: phylogeny of a novel family of tandem myosin light chain kinases.	SPEG OBSCN	3.39e-05	2	203	2	15185077
Pubmed	Apolipoprotein E isoforms and their Cys-thiol modifications impact LRP1-mediated metabolism of triglyceride-rich lipoproteins.	APOE LRP1	3.39e-05	2	203	2	38279679
Pubmed	DNA Methyltransferase 3b Accelerates the Process of Atherosclerosis.	DNMT3B APOE	3.39e-05	2	203	2	35422896
Pubmed	No evidence for cumulative effects in a Dnmt3b hypomorph across multiple generations.	DNMT1 DNMT3B	3.39e-05	2	203	2	23636699
Pubmed	Generation and characterization of a Gdf1 conditional null allele.	GDF1 TH	3.39e-05	2	203	2	18615710
Pubmed	State-dependent changes in the expression of DNA methyltransferases in mood disorder patients.	DNMT1 DNMT3B	3.39e-05	2	203	2	21592522
Pubmed	LRP1 expression in cerebral cortex, choroid plexus and meningeal blood vessels: relationship to cerebral amyloid angiopathy and APOE status.	APOE LRP1	3.39e-05	2	203	2	22967844
Pubmed	DNMT3B (C46359T) polymorphisms and immunoexpression of DNMT3b and DNMT1 proteins in oral lichen planus.	DNMT1 DNMT3B	3.39e-05	2	203	2	22236544
Pubmed	LRP1 in vascular mural cells modulates cerebrovascular integrity and function in the presence of APOE4.	APOE LRP1	3.39e-05	2	203	2	37036005
Pubmed	Age-dependent expression of DNMT1 and DNMT3B in PBMCs from a large European population enrolled in the MARK-AGE study.	DNMT1 DNMT3B	3.39e-05	2	203	2	27169697
Pubmed	Haplotypes of DNMT1 and DNMT3B are associated with mutagen sensitivity induced by benzo[a]pyrene diol epoxide among smokers.	DNMT1 DNMT3B	3.39e-05	2	203	2	18499700
Pubmed	The LDL-receptor-related protein, LRP, is an apolipoprotein E-binding protein.	APOE LRP1	3.39e-05	2	203	2	2779654
Pubmed	Regional European differences in allele and genotype frequencies of low density lipoprotein receptor-related protein 1 polymorphism in Alzheimer's disease.	APOE LRP1	3.39e-05	2	203	2	15048651
Pubmed	The synergistic risk effect of apolipoprotein ε4 and DNA (cytosine-5-)-methyltransferase 3 beta (DNMT3B) haplotype for Alzheimer's disease.	DNMT3B APOE	3.39e-05	2	203	2	27188425
Pubmed	Apolipoprotein E binding to low density lipoprotein receptor-related protein-1 inhibits cell migration via activation of cAMP-dependent protein kinase A.	APOE LRP1	3.39e-05	2	203	2	12857755
Pubmed	Mechanistic and biological significance of DNA methyltransferase 1 upregulated by growth factors in human hepatocellular carcinoma.	DNMT1 DNMT3B	3.39e-05	2	203	2	25420499
Pubmed	Association study and meta-analysis of low-density lipoprotein receptor related protein in Alzheimer's disease.	APOE LRP1	3.39e-05	2	203	2	15925094
Pubmed	DNA methyltransferase-mediated transcriptional silencing in malignant glioma: a combined whole-genome microarray and promoter array analysis.	DNMT1 DNMT3B	3.39e-05	2	203	2	19465937
Pubmed	Influence of DNMT genotype on global and site specific DNA methylation patterns in neonates and pregnant women.	DNMT1 DNMT3B	3.39e-05	2	203	2	24098518
Pubmed	DUSP4 Inactivation Leads to Reduced Extracellular Signal‒Regulated Kinase Activity through Upregulation of DUSP6 in Melanoma Cells.	DUSP4 DUSP6	3.39e-05	2	203	2	35189148
Pubmed	Low density lipoprotein receptor-related protein gene polymorphisms and risk for late-onset Alzheimer's disease in a Japanese population.	APOE LRP1	3.39e-05	2	203	2	11076057
Pubmed	Dual-vector gene therapy restores cochlear amplification and auditory sensitivity in a mouse model of DFNB16 hearing loss.	STRC STRCP1	3.39e-05	2	203	2	34910522
Pubmed	Identification of DUSP4/6 overexpression as a potential rheostat to NRAS-induced hepatocarcinogenesis.	DUSP4 DUSP6	3.39e-05	2	203	2	37946160
Pubmed	Peripheral apolipoprotein E proteins and their binding to LRP1 antagonize Alzheimer's disease pathogenesis in the brain during peripheral chronic inflammation.	APOE LRP1	3.39e-05	2	203	2	37060729
Pubmed	H1 linker histone promotes epigenetic silencing by regulating both DNA methylation and histone H3 methylation.	DNMT1 DNMT3B	3.39e-05	2	203	2	23302691
Pubmed	Influence of LRP-1 and apolipoprotein E on amyloid-β uptake and toxicity to cerebrovascular smooth muscle cells.	APOE LRP1	3.39e-05	2	203	2	22914594
Pubmed	Suppressing effects of down-regulating DNMT1 and DNMT3b expression on the growth of human cholangiocarcinoma cell line.	DNMT1 DNMT3B	3.39e-05	2	203	2	18563322
Pubmed	A PHF1-TFE3 fusion atypical ossifying fibromyxoid tumor with prominent collagenous rosettes: Case report with a brief review.	PHF1 TFE3	3.39e-05	2	203	2	34560087
Pubmed	A brain-specific decrease of the tyrosine hydroxylase protein in sepiapterin reductase-null mice--as a mouse model for Parkinson's disease.	SPR TH	3.39e-05	2	203	2	18201550
Pubmed	Genetic-morphologic association study: association between the low density lipoprotein-receptor related protein (LRP) and cerebral amyloid angiopathy.	APOE LRP1	3.39e-05	2	203	2	15634227
Pubmed	Tunable DNMT1 degradation reveals DNMT1/DNMT3B synergy in DNA methylation and genome organization.	DNMT1 DNMT3B	3.39e-05	2	203	2	38376465
Pubmed	Double RNA interference of DNMT3b and DNMT1 enhances DNA demethylation and gene reactivation.	DNMT1 DNMT3B	3.39e-05	2	203	2	14559786
Pubmed	Association of ApoE and LRP mRNA levels with dementia and AD neuropathology.	APOE LRP1	3.39e-05	2	203	2	21676498
Pubmed	Mutations in a new gene encoding a protein of the hair bundle cause non-syndromic deafness at the DFNB16 locus.	STRC STRCP1	3.39e-05	2	203	2	11687802
Pubmed	Acyl-CoA thioesterase-2 facilitates mitochondrial fatty acid oxidation in the liver.	ACOT2 ACOT1	3.39e-05	2	203	2	25114170
Pubmed	The role of tetrahydrobiopterin and catecholamines in the developmental regulation of tyrosine hydroxylase level in the brain.	SPR TH	3.39e-05	2	203	2	23647001
Pubmed	APOE genotype moderates the relationship between LRP1 polymorphism and cognition across the Alzheimer's disease spectrum via disturbing default mode network.	APOE LRP1	3.39e-05	2	203	2	34387022
Pubmed	Two apolipoprotein E mimetic peptides, ApoE(130-149) and ApoE(141-155)2, bind to LRP1.	APOE LRP1	3.39e-05	2	203	2	15182176
Pubmed	Effects on biological behavior of bladder carcinoma T24 cells via silencing DNMT1 and/or DNMT3b with shRNA in vitro.	DNMT1 DNMT3B	3.39e-05	2	203	2	19399408
Pubmed	Two-stage case-control study of DNMT-1 and DNMT-3B gene variants and breast cancer risk.	DNMT1 DNMT3B	3.39e-05	2	203	2	19798569
Pubmed	Active vitamin D induces gene-specific hypomethylation in prostate cancer cells developing vitamin D resistance.	DNMT1 DNMT3B	3.39e-05	2	203	2	32159363
Pubmed	DNMT1 and DNMT3B genetic polymorphisms affect the clinical course and outcome of melanoma patients.	DNMT1 DNMT3B	3.39e-05	2	203	2	30950914
Pubmed	Decoupling of DNA methylation and activity of intergenic LINE-1 promoters in colorectal cancer.	DNMT1 DNMT3B	3.39e-05	2	203	2	28300471
Pubmed	Mammalian APE1 controls miRNA processing and its interactome is linked to cancer RNA metabolism.	HEXA ACADVL SPTBN2 ZNF205 PHF1 DUSP23 GTPBP3 DNMT1 DNMT3B BRWD1 ATP13A1 DIDO1 CHD9 ICAM5 EXD2 CERCAM NEURL4	3.40e-05	925	203	17	28986522
Pubmed	Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.	SPTBN2 RUSC2 PTPRN2 HERC2 DIDO1 CHD9	3.46e-05	104	203	6	9205841
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	SPTBN2 ZCCHC2 PHF2 TLK1 TTBK1 DSTYK HECTD1 ARHGAP23 ATP13A1 ANO8 NEURL4 TMEM63A	3.68e-05	493	203	12	15368895
Pubmed	Quantitative high-confidence human mitochondrial proteome and its dynamics in cellular context.	ACADVL SPR GARS1 ECI1 NCBP2AS2 GRHPR ACOT2 GTPBP3 DNMT1 CKMT1A DTYMK ACOT1 LAP3 ADO EXD2 DNAJC11 CDK5RAP1 ANTKMT ENDOG	4.18e-05	1136	203	19	34800366
Pubmed	LMBR1L regulates lymphopoiesis through Wnt/β-catenin signaling.	SCARF2 PGRMC1 LRRC47 MOGS EIF2B4 HECTD1 DNMT1 TBC1D15 ATP13A1 AHCTF1 OBSL1 COG8 CNNM3 INTS5 EXD2 DNAJC11 CAPN15	4.26e-05	942	203	17	31073040
Pubmed	TWIST1 and chromatin regulatory proteins interact to guide neural crest cell differentiation.	STAU1 PHF2 OBSL1 NVL CHD9 SPEN	4.51e-05	109	203	6	33554859
Pubmed	Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis.	HEXA ACADVL SPR OBSCN ECI1 PGRMC1 NSFL1C MOGS GRHPR ACOT1 CORO1B APOE LAP3 DNAJC11 AP3B2 LRP1	4.97e-05	859	203	16	31536960
Pubmed	Comparative DNA sequence analysis of mouse and human protocadherin gene clusters.	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	4.99e-05	68	203	5	11230163
Interaction	PCDHGA7 interactions	PTPRS PCDHGA10 PCDHGA7 PCDHGA4 DCHS1	3.66e-06	25	195	5	int:PCDHGA7
Interaction	ZNF773 interactions	TLK1 TRIM41 TRIM39 HASPIN	7.89e-06	14	195	4	int:ZNF773
Interaction	PCDHGA4 interactions	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	1.78e-05	34	195	5	int:PCDHGA4
Cytoband	Ensembl 112 genes in cytogenetic band chr19p13	CPAMD8 MISP3 GDF1 NIBAN3 YJU2B PTPRS ACTL9 GRIN3B GTPBP3 DNMT1 MBD3L5 ATP13A1 MBD3L4 ANO8 ICAM5 CYP4F12	6.71e-07	797	204	16	chr19p13
Cytoband	19p13.11	CPAMD8 NIBAN3 GTPBP3 ATP13A1 ANO8	1.94e-05	73	204	5	19p13.11
Cytoband	5q31	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	1.70e-04	115	204	5	5q31
Cytoband	Ensembl 112 genes in cytogenetic band chr5q31	TMCO6 PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3 ARAP3	4.01e-04	298	204	7	chr5q31
Cytoband	10q21.3	PBLD ADO CCAR1	4.67e-04	34	204	3	10q21.3
Cytoband	Ensembl 112 genes in cytogenetic band chr15q15	SPTBN5 STARD9 STRC STRCP1 CKMT1A	5.29e-04	147	204	5	chr15q15
Cytoband	19p13.2	YJU2B ACTL9 DNMT1 MBD3L5 MBD3L4 ICAM5	5.90e-04	229	204	6	19p13.2
Cytoband	1p36	LUZP1 RUNX3 SPEN	1.21e-03	47	204	3	1p36
Cytoband	22q11.21	SCARF2 GGT3P GSC2 GGT2P	1.56e-03	111	204	4	22q11.21
GeneFamily	Clustered protocadherins	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	9.31e-05	64	129	5	20
GeneFamily	BTG/Tob family	TOB2 TOB1	7.44e-04	6	129	2	1309
GeneFamily	EF-hand domain containing\|Spectrins	SPTBN2 SPTBN5	1.04e-03	7	129	2	1113
GeneFamily	Blood group antigens\|CD molecules\|I-set domain containing\|Immunoglobulin like domain containing	SPEG OBSCN PTPRS OBSL1 MDGA1 LRIT1	1.05e-03	161	129	6	593
GeneFamily	Acyl-CoA thioesterases	ACOT2 ACOT1	2.19e-03	10	129	2	41
GeneFamily	MAP kinase phosphatases	DUSP4 DUSP6	2.66e-03	11	129	2	895
Coexpression	GSE27670_BLIMP1_VS_LMP1_TRANSDUCED_GC_BCELL_UP	FNBP1 MAGEB4 GLI1 RNF26 COL6A3 ZNFX1 CORO1B ICAM5 HASPIN PRKCG	3.90e-06	200	203	10	M8209
ToppCell	Hippocampus-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Fibcd1\|Hippocampus / BrainAtlas - Mouse McCarroll V32	EPHB3 MATN2 TBATA KLHL34 DUSP6 NLRP6 ICAM5 MDGA1 TNXB	9.31e-09	130	204	9	c70fb77324916d220d842a575558a8245c276599
ToppCell	368C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_6\|CD8+_Cytotoxic_T-cell / Donor, Lineage, Cell class and subclass (all cells)	TOB2 ECI1 TLK1 NCBP2AS2 DUSP6 CORO1B PIM3 SPEN	5.68e-08	114	204	8	670c9802a59b39241abf6f2c12a3d1844c7db5e5
ToppCell	LPS_only-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	MATN2 LURAP1L PTPRS INSC TBX2 COL6A3 DACT3 TNXB	2.11e-06	183	204	8	12daaea821e49bc94a01e2496331e92a80d27339
ToppCell	droplet-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l30\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CADM4 MATN2 ITGA7 ARHGEF16 DHH INSC KIF19 EDA	2.48e-06	187	204	8	8e8b147258982b359447add5027318f5b6d51963
ToppCell	facs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l1\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	SCARF2 MATN2 PTPRS TBX2 COL6A3 TOB1 DACT3 PRG4	3.65e-06	197	204	8	3fe665c0277d091290b63f0dd24c0c6536a45309
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_CT-L6_CT_VISp_Krt80_Sla\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	OBSCN ITGA7 SPTBN5 TBATA NLRP6 GALNT9 PRKCG	6.31e-06	151	204	7	f50c5ae9dae507df750df25e151b58685fec70ce
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_CT\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	OBSCN ITGA7 SPTBN5 TBATA NLRP6 GALNT9 PRKCG	1.00e-05	162	204	7	58da6bc04cdac0002b0e6a751c96ff95e1a7f70f
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_CT-L6_CT_VISp_Ctxn3_Sla\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	OBSCN ITGA7 SPTBN5 TBATA NLRP6 GALNT9 PRKCG	1.00e-05	162	204	7	4d13c271b4f63cf32980e5643b5d5951165fe8b5
ToppCell	facs-Heart-RA-18m-Mesenchymal-smooth_muscle_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITGA7 ARHGEF16 ADCY5 STRC CKMT1A TBX2 ANO8	1.42e-05	171	204	7	b54d9d6b03c9c6f28a71cf2ed2bfa9a335bba949
ToppCell	facs-Heart-RA-18m-Mesenchymal-smooth_muscle_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ITGA7 ARHGEF16 ADCY5 STRC CKMT1A TBX2 ANO8	1.42e-05	171	204	7	9d825a2e799421af4f2cf4f4dc8e239b5d00476d
ToppCell	facs-Trachea-18m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l32-30\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CADM4 MATN2 ITGA7 INSC KIF19 PCDHGA7 SHROOM2	1.78e-05	177	204	7	59cf56c385c324f0844f20003d2b5049a2791e45
ToppCell	LPS-IL1RA-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	MATN2 PTPRS INSC COL6A3 DACT3 LRP1 TNXB	1.91e-05	179	204	7	02c90d8306016365ed811f0c63cfb3ac7b85464c
ToppCell	10x3'2.3-week_14-16-Lymphocytic_NK-T_NK-ILC_precursor\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	FNBP1 MATN2 GAL3ST2 SCN8A EDA SOCS1 TMEM63A	1.98e-05	180	204	7	27672ac6a02172a31851f18decb9acffa8f5a703
ToppCell	P15-Mesenchymal-mesenchymal_fibroblast-mesenchymal_alveolar_niche_cell\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	MATN2 ZNF469 COL6A3 APOE LRP1 CERCAM TNXB	2.12e-05	182	204	7	e9fcae9d03a6faf85b91882c5da699037bc61aeb
ToppCell	10x5'v1-week_12-13-Mesenchymal_osteo-stroma-osteoblast\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	PTPRS INSC PCDHGA9 PCDHGA7 SHROOM2 TH CERCAM	2.12e-05	182	204	7	ba066ff9029cc052b76e2330ec168cb2e9b7e498
ToppCell	droplet-Limb_Muscle-Pre-Sort-18m-Macroglial-nan\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CADM4 MATN2 ARHGEF16 DHH WNK4 WNK2 ACOT1	2.12e-05	182	204	7	c00e503f442d44fbae73c5e2dc85be69e294e67a
ToppCell	P07-Mesenchymal-mesenchymal_fibroblast-mesenchymal_alveolar_niche_cell\|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	MATN2 ZNF469 COL6A3 APOE LRP1 CERCAM TNXB	2.28e-05	184	204	7	01257e5c12e38b849fd3d9496c43ded666249ba5
ToppCell	droplet-Kidney-KIDNEY-1m-Mesenchymal-Stroma____fibroblast\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SCARF2 MATN2 GLI1 COL6A3 LRP1 CERCAM TNXB	2.36e-05	185	204	7	785c55d39909fac74415f24427979691e7e694e6
ToppCell	droplet-Kidney-KIDNEY-1m-Mesenchymal\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SCARF2 MATN2 GLI1 COL6A3 LRP1 CERCAM TNXB	2.36e-05	185	204	7	97a1dcacbc48dc3f41c26fbb59af35c935f894d4
ToppCell	LPS-IL1RA+antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	MATN2 INSC TBX2 COL6A3 DACT3 LRP1 TNXB	2.36e-05	185	204	7	3b2dfc8f4c87be516265dbecfc251276034d0efd
ToppCell	droplet-Kidney-KIDNEY-1m-Mesenchymal-fibroblast\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SCARF2 MATN2 GLI1 COL6A3 LRP1 CERCAM TNXB	2.44e-05	186	204	7	94d577dbb6bfacf50632e1fe8af041b35a1e6b23
ToppCell	Adult-Mesenchymal-pericyte_cell\|Adult / Lineage, Cell type, age group and donor	OBSCN ADCY5 INSC STARD9 TBX2 COL6A3 DUSP4	2.53e-05	187	204	7	62759efb660179402fb574ce5701c89a2e17bcfe
ToppCell	Frontal_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_2-Parm1-Excitatory_Neuron.Slc17a7.Parm1.Fos_(Deep_layer_pyramidal_cells--layer_5_(IEG))\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	NIBAN3 CAVIN4 DNMT3B DNHD1 CERCAM	2.77e-05	77	204	5	4879a1a72b950dadb78bc0312be75f1a32b935d5
ToppCell	LPS-IL1RA-Stromal_mesenchymal-Lung_smooth_muscle\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SPEG ITGA7 ADCY5 TBX2 COL6A3 GALNT9 DACT3	2.89e-05	191	204	7	7853ac7dff649150e6ff27cd4c8cf7c1fc034ed4
ToppCell	Control-Stromal_mesenchymal\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SPEG ADCY5 PTPRS APOE DACT3 LRP1 TNXB	2.89e-05	191	204	7	14057205ddb9b4bbc582d1358d13cf36d979a61b
ToppCell	wk_20-22-Hematologic-Myeloid-APOE+_Mac1\|wk_20-22 / Celltypes from embryonic and fetal-stage human lung	ZC3H3 RUSC2 PPM1N TRIM41 APOE LAP3 ADO	2.89e-05	191	204	7	c204ec71b7755b46a18d3a6aa84d0f407145ce9d
ToppCell	nucseq-Immune-Lymphocytic_T/NK-Lymphocytic_T/NK-CD4_T\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	FNBP1 LUZP1 DUSP4 CORO1B RUNX3 TOB1 SOCS1	3.09e-05	193	204	7	9c9434a3297b85774b4f0ecab6294f44d738e29f
ToppCell	TCGA-Thryoid-Primary_Tumor-Thyroid_Papillary_Carcinoma-Classical\|TCGA-Thryoid / Sample_Type by Project: Shred V9	EPHB3 MGAT4B SPTBN2 ARHGAP23 DUSP4 DUSP6 ICAM5	3.20e-05	194	204	7	b46c54802b8d1e0a0a17f9ed8e82eaf5e7f4849d
ToppCell	facs-Trachea\|facs / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	TOB2 MATN2 COL6A3 TOB1 LRP1 PRG4 TNXB	3.41e-05	196	204	7	8209f2b0f7efebaaf81d642d18a1aee8a9a8dcf6
ToppCell	facs-Trachea\|facs / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	TOB2 MATN2 COL6A3 TOB1 LRP1 PRG4 TNXB	3.41e-05	196	204	7	34020d6553309daa269dff05de0a8567211ea4d2
ToppCell	Parenchymal-NucSeq-Stromal-Pericyte-Muscle_pericyte_pulmonary\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	OBSCN ADCY5 TTC7B INSC STARD9 TBX2 APOE	3.52e-05	197	204	7	f66945f9007d59d4208849c7fd727f8519713fbc
ToppCell	COVID-19_Mild\|World / Disease condition and Cell class	ZCCHC2 PRRC2C DUSP6 RUNX3 LAP3 PIM3 LRP1	3.64e-05	198	204	7	61ceb2245b6cb58e308b999a61d218c89dbc615e
ToppCell	(5)_Fibroblast-G\|World / Lung cell shreds - cell class (v4) and cell subclass (v4)	LURAP1L PTPRS TBX2 COL6A3 LRP1 PRG4 TNXB	3.76e-05	199	204	7	b4a737575be9f8c65771832dd8cd25328d5dae0d
ToppCell	LPS_IL1RA-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast\|LPS_IL1RA / Treatment groups by lineage, cell group, cell type	MATN2 LURAP1L TBATA INSC COL6A3 LRP1 TNXB	3.76e-05	199	204	7	6b3a0e5d52a30d0eed30e6a670f5b53bc233f70c
ToppCell	Control_saline-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast\|Control_saline / Treatment groups by lineage, cell group, cell type	MATN2 LURAP1L INSC GLI1 COL6A3 LRP1 TNXB	3.88e-05	200	204	7	a799fc7bb83ad0524362cb5010df949741fb7bf3
ToppCell	367C-Fibroblasts-Fibroblast-G\|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)	KIF19 DOCK8-AS1 ANO8 PRG4 PSD4	8.38e-05	97	204	5	12cbd03b33e76e5e471bbee2a9c11f27e8b21123
ToppCell	367C-Fibroblasts-Fibroblast-G-\|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)	KIF19 DOCK8-AS1 ANO8 PRG4 PSD4	8.38e-05	97	204	5	a1279377bf0ee5662db8b9303f5f1fd418dee6df
ToppCell	390C-Myeloid-Macrophage-SPP1+_Macrophage_2\|Macrophage / Donor, Lineage, Cell class and subclass (all cells)	USP13 DUSP4 TRIM39 ZSWIM6 RUNX3 NEURL4	9.58e-05	160	204	6	8aaf6ac4f33ea291387fdbf9ff1a91d559391774
ToppCell	Adult-Mesenchymal-myofibroblast_cell-D175\|Adult / Lineage, Cell type, age group and donor	ITGA7 TBX2 COL6A3 DUSP4 ENDOG TNXB	9.92e-05	161	204	6	048b7dc00746987a24bf870d4d278c4183eb04a2
ToppCell	facs-Marrow-T_cells-18m-Lymphocytic-immature_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NIBAN3 NHS EDA SLC1A7 TH PRKCG	1.03e-04	162	204	6	22f1abd20f43bc7e7fc46969da9962faf70ae5d2
ToppCell	facs-Marrow-T_cells-18m-Lymphocytic-immature_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NIBAN3 NHS EDA SLC1A7 TH PRKCG	1.03e-04	162	204	6	966df4558140c3d541999ab553f201ae76a1c401
ToppCell	primary_visual_cortex-Neuronal-glutamatergic_neuron-L6_CT-L6_CT_VISp_Ctxn3_Brinp3\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	OBSCN SPTBN5 TBATA NLRP6 GALNT9 PRKCG	1.06e-04	163	204	6	b0aa4a620bd58011225b42ea6dda04e3101ba342
ToppCell	E18.5-samps-Mesenchymal-Matrix_fibroblast-MatrixFB-A\|E18.5-samps / Age Group, Lineage, Cell class and subclass	PTPRS TBX2 COL6A3 APOE RUNX3 LRP1	1.10e-04	164	204	6	519ab4fe885dfe4c50846f346a062acc2cb44299
ToppCell	wk_08-11-Mesenchymal-Fibroblast-Alveolar_fibro\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	SCN8A TBX2 COL6A3 PCDHGA9 DCHS1 LRP1	1.17e-04	166	204	6	65dafed953b01a9830b54309af75c7a561e88336
ToppCell	ILEUM-non-inflamed-(3)_MNP-(3)_pDC\|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	CYP1A2 NIBAN3 PTPRS CKMT1A DNMT3B TOB1	1.21e-04	167	204	6	8ddf9da71a7c4ed53588435db826563a24cee616
ToppCell	Adult-Mesenchymal-myofibroblast_cell\|Adult / Lineage, Cell type, age group and donor	GLI1 KLHL33 TBX2 COL6A3 ENDOG TNXB	1.21e-04	167	204	6	d584a8548a5317bd9686b3be8246ae6ed568796b
ToppCell	3'-Child09-12-SmallIntestine-Hematopoietic-T_cells-NK_T_cell\|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	GIMAP1 ADAD2 RUNX3 CCDC198 HASPIN PPP1R18	1.25e-04	168	204	6	b4b73f3fc9f4c3d87ca0a63ff8b2842141ccd0e6
ToppCell	Children_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	CAVIN4 PTPRN2 WNK2 DUSP4 AP3B2 PRKCG	1.29e-04	169	204	6	96a2aec9acf8a6f966973c035e5ade456cf47772
ToppCell	390C-Lymphocytic-CD4_T-cell-CD4+_Effector_T_cell-2\|390C / Donor, Lineage, Cell class and subclass (all cells)	LUZP1 EIF2B4 DNMT3B CCR10 DUSP4 TOB1	1.29e-04	169	204	6	cfc9ff103d13a2d5eacc457e800f53fdd29f7738
ToppCell	mild_COVID-19-pDC\|World / disease group, cell group and cell class (v2)	CADM4 MATN2 NIBAN3 PTPRS KLHL33 OBSL1	1.42e-04	172	204	6	dab2f1a05c7df58d9387b13271b3f1f1583f9ac3
ToppCell	Adult-Mesenchymal-pericyte_cell-D175\|Adult / Lineage, Cell type, age group and donor	OBSCN ADCY5 INSC TBX2 COL6A3 DUSP4	1.47e-04	173	204	6	fd6653d6be9ca6ac36798590694efe03cb758c67
ToppCell	Entopeduncular-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1\|Entopeduncular / BrainAtlas - Mouse McCarroll V32	CCDC88B TBATA STRC ICAM5 PRKCG	1.52e-04	110	204	5	438bf761ab0a25e3dc9244c23ae2c2d68a169c7f
ToppCell	Entopeduncular-Neuronal-Excitatory-eN1(Slc17a7)\|Entopeduncular / BrainAtlas - Mouse McCarroll V32	CCDC88B TBATA STRC ICAM5 PRKCG	1.52e-04	110	204	5	3639fb5fc02eca509cb220295bc3e6064c23baab
ToppCell	Entopeduncular-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Excitatory_Neuron.Slc17a7.Zbtb20_(Ventral_Hippocampus)\|Entopeduncular / BrainAtlas - Mouse McCarroll V32	CCDC88B TBATA STRC ICAM5 PRKCG	1.52e-04	110	204	5	ff196c71aa2a21cdd812958bd163fa6b91bd2352
ToppCell	Entopeduncular-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Excitatory_Neuron.Slc17a7.Zbtb20_(Ventral_Hippocampus)-\|Entopeduncular / BrainAtlas - Mouse McCarroll V32	CCDC88B TBATA STRC ICAM5 PRKCG	1.52e-04	110	204	5	46635a130453c2fa304f0e09561b2a267c9ceb31
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW19-Neuronal-Neuron\|GW19 / Sample Type, Dataset, Time_group, and Cell type.	SCARF2 PHF2 STARD9 OGFR EDA ARAP3	1.56e-04	175	204	6	2812ac2ef41d245db544697fb6da1883361c96e8
ToppCell	COVID-19-Heart-VSMC\|COVID-19 / Disease (COVID-19 only), tissue and cell type	SPEG ITGA7 ADCY5 NHS TBX2 DACT3	1.56e-04	175	204	6	1125f0d3a5b2388fa77a820dea0288e824d84a82
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	SPEG ITGA7 ADCY5 BMPR2 TBX2 PRG4	1.56e-04	175	204	6	316f2ea930437bf1243b1c0f45e6bd864112c6f2
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell-\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	SPEG ITGA7 ADCY5 BMPR2 TBX2 PRG4	1.56e-04	175	204	6	a9f08e1e4c2997dcdd3e5d92daac480da19100b8
ToppCell	facs-Brain_Myeloid-Striatum-24m-Myeloid-macrophage\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ERCC8 CIITA ARHGAP23 RUNX3 RELT NEURL4	1.66e-04	177	204	6	f6b9d91d46830d0d207b0abd4ee5a4942fd99774
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell\|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)	GIMAP1 TLK1 DUSP4 EDA TOB1 TMEM63A	1.66e-04	177	204	6	64b8f665fdaf975558af2ad7d9b54d206de8350c
ToppCell	Cerebellum-Macroglia-ASTROCYTE-Gja1-Gfap+_astrocytes_(Gfap)--\|Cerebellum / BrainAtlas - Mouse McCarroll V32	EPHB3 EPX ARHGEF16 CAVIN4 NOXO1	1.72e-04	113	204	5	fed408864201218295bac0cc6647953fda8d688e
ToppCell	Cerebellum-Macroglia-ASTROCYTE-Gja1-Gfap+_astrocytes_(Gfap)-\|Cerebellum / BrainAtlas - Mouse McCarroll V32	EPHB3 EPX ARHGEF16 CAVIN4 NOXO1	1.72e-04	113	204	5	c0b8d7a2e3722029e850051bdff77f31f34a8cca
ToppCell	Cerebellum-Macroglia-ASTROCYTE-Gja1-Gfap+_astrocytes_(Gfap)\|Cerebellum / BrainAtlas - Mouse McCarroll V32	EPHB3 EPX ARHGEF16 CAVIN4 NOXO1	1.72e-04	113	204	5	7e24c0f6a80e10a2a41325d48a87628bd330a1e2
ToppCell	5'-GW_trimst-2-LargeIntestine-Hematopoietic-B_cells-Pre-B\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NIBAN3 TLK1 CIITA DOCK8-AS1 DDX27 PRKCG	1.77e-04	179	204	6	dc0b806904ef4c2f74f34ade2b1c0d6893f3b2ec
ToppCell	facs-Heart-RV-24m-Mesenchymal-smooth_muscle_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SPEG ITGA7 ARHGEF16 INSC GTPBP3 TBX2	1.82e-04	180	204	6	a37cc885fe3f6cb9df69d43358064c83c18412e7
ToppCell	facs-Heart-RV-24m-Mesenchymal-smooth_muscle_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SPEG ITGA7 ARHGEF16 INSC GTPBP3 TBX2	1.82e-04	180	204	6	63a6d532b16b8b15c7c9102148d7297ee3afd641
ToppCell	Fetal_29-31_weeks-Endothelial-alveolar_capillary_endothelial_cell_(Cap2;_aerocyte)-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	CPAMD8 LUZP1 PLEKHG2 LAP3 ARAP3 NEURL3	1.82e-04	180	204	6	d8ef44710a77ad0fc03243428e5e1dc4d41200cb
ToppCell	5'-Parenchyma_lung-Endothelial-Blood_vessel_EC-vein_endothelial_cell-EC_venous_pulmonary-EC_venous_pulmonary_L.2.2.1.1\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	MOGS DTYMK ZSWIM6 TFE3 MDGA1 TNXB	1.82e-04	180	204	6	40d4838a0ccb10d5e49266bc8a0037d27b75ccc2
ToppCell	facs-Brain_Non-Myeloid-Hippocampus-3m-Epithelial\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE9A EPX PTPRS KIF19 INTS5 RELT	1.88e-04	181	204	6	ad30c01290fb98adbd0caed301a584761212c977
ToppCell	droplet-Marrow-BM-1m-Myeloid-nan\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DOK3 NIBAN3 TAF10 OGFR GALNT9 CDK5RAP1	1.88e-04	181	204	6	89c551de26de047c316c91ac1d97bdf728a33d9e
ToppCell	facs-Brain_Non-Myeloid-Hippocampus-3m-Epithelial-neuronal_stem_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE9A EPX PTPRS KIF19 INTS5 RELT	1.88e-04	181	204	6	4e81ec1580e9acb22c32c465eb46f83d1e9e424e
ToppCell	PND14-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MATN2 ZNF469 GLI1 COL6A3 LRP1 CERCAM	1.88e-04	181	204	6	3462aa1c08fbaf613b6278ab2c7a5a0940bf537d
ToppCell	droplet-Liver-LIVER-NPC-1m-Epithelial\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYP1A2 ECI1 PGRMC1 GRHPR ACTL9 ACOT1	1.88e-04	181	204	6	48d28eafbb5f4b141deeb0bf020dfca39e7be7a5
ToppCell	PND14-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_mature\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	MATN2 ZNF469 GLI1 COL6A3 LRP1 CERCAM	1.88e-04	181	204	6	6730e249cac55ae892cc567d9211615882f3dab4
ToppCell	droplet-Liver-LIVER-NPC-1m-Epithelial-hepatocyte\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYP1A2 ECI1 PGRMC1 GRHPR ACTL9 ACOT1	1.88e-04	181	204	6	0a44781cc34535f061812d1370f748b7bbdef17b
ToppCell	facs-Brain_Non-Myeloid-Hippocampus-3m-Epithelial-nan\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PDE9A EPX PTPRS KIF19 INTS5 RELT	1.88e-04	181	204	6	3a3268a4dff8ffcb79e09f46490e138c96f8d916
ToppCell	E18.5-samps-Mesenchymal-Matrix_fibroblast\|E18.5-samps / Age Group, Lineage, Cell class and subclass	PTPRS TBX2 COL6A3 APOE DACT3 LRP1	1.93e-04	182	204	6	ceb37c214662a48efb56ab0d015977c6fab478b0
ToppCell	Control-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	PTPRS INSC GLI1 DACT3 LRP1 TNXB	1.99e-04	183	204	6	7eae9b3b4d1c9b135fa7cff348393d4adec474b4
ToppCell	Pericytes-IPF_02\|World / lung cells shred on cell class, cell subclass, sample id	SPEG ITGA7 ADCY5 TBX2 DACT3 DCHS1	2.05e-04	184	204	6	cd10d351d91a81dd6dc806cb4e0c8d7861c98e0b
ToppCell	facs-Brain_Non-Myeloid-Striatum-3m-Mesenchymal-brain_pericyte\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SPEG SYNPO2L ITGA7 LURAP1L TBX2 PLEKHG2	2.05e-04	184	204	6	89ae8bf1a6c2d355d279d23a5e24a08d9ec2334e
ToppCell	LPS-IL1RA-Stromal_mesenchymal-Lung_smooth_muscle-Pericyte_2\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	ADCY5 LURAP1L TBX2 COL6A3 GALNT9 DACT3	2.05e-04	184	204	6	102b6f621a5b551e622f97b12d787c080b052a72
ToppCell	droplet-Marrow-BM-1m-Myeloid\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DOK3 NIBAN3 TAF10 OGFR GALNT9 CDK5RAP1	2.05e-04	184	204	6	69348c9237e44f7752ac01f60e733ad41580fdb8
ToppCell	droplet-Limb_Muscle-nan-3m-Macroglial-unknown\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CADM4 MATN2 ARHGEF16 DHH INSC ACOT1	2.05e-04	184	204	6	da8d6e7944eb35e6cbea2feb7cbc2894787d723f
ToppCell	facs-Brain_Non-Myeloid-Striatum-3m-Mesenchymal-Pericyte\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SPEG SYNPO2L ITGA7 LURAP1L TBX2 PLEKHG2	2.05e-04	184	204	6	34c84ac9a32eaf96f45b79485119cad65905817d
ToppCell	droplet-Kidney-nan-21m-Mesenchymal-fibroblast\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SCARF2 MATN2 GLI1 COL6A3 LRP1 TNXB	2.05e-04	184	204	6	3bffadb0cb2e0d825bdb6cfc5d23f5436cbc3efd
ToppCell	LPS_only-Stromal_mesenchymal-Lung_smooth_muscle-Pericyte_2\|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	ADCY5 STARD9 TBX2 GALNT9 DACT3 MDGA1	2.05e-04	184	204	6	327ff3ac8d2fecdd5d242bdc34f0dfdb1c59a68b
ToppCell	LPS-IL1RA-Unknown-Endothelial\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SPTBN2 CCR10 DUSP4 NVL GALNT9	2.11e-04	118	204	5	aefad0b35aff980b6a2a98057735442e8a65ab04
ToppCell	LPS-IL1RA-Unknown\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SPTBN2 CCR10 DUSP4 NVL GALNT9	2.11e-04	118	204	5	6cb4063b83f867b782080ce5b1199b51bb277f2a
ToppCell	droplet-Kidney-nan-21m-Mesenchymal\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SCARF2 MATN2 GLI1 COL6A3 LRP1 TNXB	2.11e-04	185	204	6	33cc0e9d8b54cb7408b51235f2a70e044ebae04d
ToppCell	droplet-Kidney-nan-21m-Mesenchymal-Stroma____fibroblast\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SCARF2 MATN2 GLI1 COL6A3 LRP1 TNXB	2.11e-04	185	204	6	9954fc85b183c1cc45c3c24e3dadc7984ee6f649
ToppCell	droplet-Limb_Muscle-nan-24m-Macroglial-nan\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CADM4 MATN2 ARHGEF16 DHH INSC WNK4	2.18e-04	186	204	6	adba5647a2feaba8e361dc1020d2f2dc4ce36b16
ToppCell	Children_(3_yrs)-Mesenchymal-pericyte_cell-D032\|Children_(3_yrs) / Lineage, Cell type, age group and donor	OBSCN ADCY5 WNK2 TBX2 CCR10 DUSP4	2.24e-04	187	204	6	86250acf088ec0c4800a0dfa031b0d4f7e52c342
ToppCell	COVID-19-Fibroblasts-Airway_smooth_muscle\|COVID-19 / group, cell type (main and fine annotations)	SPEG ITGA7 ADCY5 NHS TBX2 COL6A3	2.24e-04	187	204	6	464a0c3b92b778911b5f9cd73642e09e3472063a
ToppCell	Fetal_29-31_weeks-Mesenchymal-pericyte_cell\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	OBSCN LURAP1L STARD9 TBX2 COL6A3 DUSP4	2.24e-04	187	204	6	a2bf958ea59c359a265bfa437d59315e1920cdd4
ToppCell	Fetal_29-31_weeks-Mesenchymal-pericyte_cell-D062\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	OBSCN ADCY5 STARD9 TBX2 DUSP4 SHROOM2	2.30e-04	188	204	6	ccddc08121caff958a2b6f9e278a018858af6b4d
ToppCell	E16.5-samps-Mesenchymal\|E16.5-samps / Age Group, Lineage, Cell class and subclass	PTPRS GLI1 TBX2 COL6A3 DACT3 LRP1	2.30e-04	188	204	6	3f0f662be684e3a4c6652e636cc135a39a1d2790
ToppCell	TCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Colon_Adenocarcinoma-7\|TCGA-Colorectal / Sample_Type by Project: Shred V9	STAU1 RUSC2 ZNF469 GLI1 DIDO1 DDX27	2.30e-04	188	204	6	14bc73cf79c79c9f208369fd8d498e5b26e0114d
ToppCell	droplet-Liver-LIVER_NPC-30m-Endothelial-endothelial_cell_of_hepatic_sinusoid\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	GIMAP1 BMPR2 ARHGAP23 PCDHGA10 PCDHGA3 ARAP3	2.30e-04	188	204	6	0aa8747c2931b0c91f6d78bb2db8fd8ede6dd559
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Lung_smooth_muscle\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SPEG MATN2 ADCY5 TBX2 COL6A3 DACT3	2.37e-04	189	204	6	7ab1cfc1657277858339f7258a0c4ae9cb42fdf8
Disease	mental development measurement	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	6.01e-07	25	197	5	EFO_0008230
Disease	Colorectal Carcinoma	CYP1A2 CPAMD8 SPTBN2 OBSCN LRRC47 PTPRN2 PTPRS ACTL9 FRMPD2 CORO1B EDA SLC1A7 ARAP3 ICAM5 DCHS1 LRP1 CCAR1 CTBP1	1.28e-06	702	197	18	C0009402
Disease	autosomal recessive nonsyndromic deafness 16 (implicated_via_orthology)	STRC STRCP1	4.43e-05	2	197	2	DOID:0110471 (implicated_via_orthology)
Disease	Spinocerebellar ataxia 14	SPTBN2 PRKCG	4.43e-05	2	197	2	C1854369
Disease	response to corticosteroid, response to salmeterol, respiratory symptom change measurement	STAU1 DDX27	4.43e-05	2	197	2	EFO_0010062, EFO_0010068, GO_0031960
Disease	phoneme awareness	STAU1 ZNFX1 DDX27	1.01e-04	14	197	3	EFO_0021812
Disease	childhood trauma measurement, alcohol consumption measurement	PCDHGA10 PCDHGA9 PCDHGA7 PCDHGA4 PCDHGA3	1.15e-04	71	197	5	EFO_0007878, EFO_0007979
Disease	endometriosis of uterus (is_marker_for)	DNMT1 DNMT3B	1.32e-04	3	197	2	DOID:288 (is_marker_for)
Disease	Dopa-Responsive Dystonia	SPR TH	1.32e-04	3	197	2	C1851920
Disease	Dopa-responsive dystonia	SPR TH	1.32e-04	3	197	2	cv:CN221588
Disease	Vesico-Ureteral Reflux	DSTYK TNXB	2.64e-04	4	197	2	C0042580
Disease	congenital heart disease (biomarker_via_orthology)	DNMT1 DNMT3B	2.64e-04	4	197	2	DOID:1682 (biomarker_via_orthology)
Disease	dodecadienoate (12:2) measurement	ECI1 ACOT2	4.38e-04	5	197	2	EFO_0800572
Disease	Sarcosine measurement	PCDHGA7 PCDHGA4 PCDHGA3	4.70e-04	23	197	3	EFO_0021668
Disease	mean arterial pressure	CYP1A2 SYNPO2L TTBK1 RNF32-DT DNMT1 TBX2 DUSP4 RUNX3 TFE3 ARAP3 ADO	5.67e-04	499	197	11	EFO_0006340
Disease	total brain volume change measurement, age at assessment	PDE9A PTPRN2 APOE	6.05e-04	25	197	3	EFO_0008007, EFO_0021504
Disease	pseudohypoaldosteronism (implicated_via_orthology)	WNK4 WNK2	6.54e-04	6	197	2	DOID:4479 (implicated_via_orthology)
Disease	ventral diencephalon volume measurement	CORO1B GALNT9	9.11e-04	7	197	2	EFO_0010337
Disease	aflatoxins-related hepatocellular carcinoma (biomarker_via_orthology)	GGT3P GGT2P	9.11e-04	7	197	2	DOID:5022 (biomarker_via_orthology)
Disease	alcohol dependence (biomarker_via_orthology)	GGT3P GGT2P	1.21e-03	8	197	2	DOID:0050741 (biomarker_via_orthology)
Disease	JT interval	ANKRD9 OBSCN STAU1 TTC7B BRWD1 DDX27 CNNM3	1.45e-03	248	197	7	EFO_0007885
Disease	Bipolar Disorder	PDE9A SPR ZCCHC2 STARD9 SCN8A DNMT1 DUSP6 APOE TH MDGA1	1.46e-03	477	197	10	C0005586
Disease	primary bacterial infectious disease (implicated_via_orthology)	DHH GLI1	1.55e-03	9	197	2	DOID:0050338 (implicated_via_orthology)
Disease	Delirium	APOE TH	1.93e-03	10	197	2	C0011206
Disease	dilated cardiomyopathy (is_marker_for)	PDE9A OBSCN GDF1	2.24e-03	39	197	3	DOID:12930 (is_marker_for)
Disease	creatinine measurement	CYP1A2 ATP6V1B1 ANKRD9 SPEG OBSCN PRRC2C RNF32-DT TBX2 OGFR CHD9 APOE SLC1A7 TH AP3B2 PSD4	2.92e-03	995	197	15	EFO_0004518
Disease	triacylglycerol 56:6 measurement	AHCTF1 APOE GSC2	2.97e-03	43	197	3	EFO_0010433
Disease	QT interval	ANKRD9 SYNPO2L STAU1 CAVIN4 TTC7B PRRC2B BRWD1 DDX27 CNNM3 NEURL4	3.29e-03	534	197	10	EFO_0004682
Disease	plasma beta-amyloid 1-42 measurement	CAVIN4 APOE	3.30e-03	13	197	2	EFO_0005660
Disease	gallbladder cancer (is_implicated_in)	GLI1 APOE	3.30e-03	13	197	2	DOID:3121 (is_implicated_in)
Disease	FEV/FEC ratio	PDE9A SCARF2 SPEG OTUD7B SPTBN5 PHF1 PHF2 TTC7B RNF32-DT COL6A3 RUNX3 TFE3 ADO YLPM1 LRP1 PRG4 TNXB	3.74e-03	1228	197	17	EFO_0004713
Disease	Gastro-enteropancreatic neuroendocrine tumor	CIITA RUNX3	4.40e-03	15	197	2	C2930967
Disease	idiopathic scoliosis (implicated_via_orthology)	ZMYND10 RUNX3	5.00e-03	16	197	2	DOID:0060250 (implicated_via_orthology)
Disease	Mood Disorders	SPR DNMT1 DNMT3B DUSP6 TH	5.51e-03	168	197	5	C0525045
Disease	response to radiation, Urinary retention	PTPRS COL6A3	5.65e-03	17	197	2	GO_0009314, HP_0000016
Disease	Dystonia, Limb	COL6A3 TH	5.65e-03	17	197	2	C0751093
Disease	Dystonia, Diurnal	COL6A3 TH	5.65e-03	17	197	2	C0393610
Disease	pulse pressure measurement	SYNPO2L ZCCHC2 EPX ADCY5 LUZP1 RNF215 TTBK1 DNMT1 TBX2 DNMT3B COL6A3 APOE NEURL3 ADO GALNT9 LRP1 SLC38A7 CERCAM	5.79e-03	1392	197	18	EFO_0005763
Disease	congestive heart failure (biomarker_via_orthology)	SCN8A DNMT1 TH ENDOG	5.83e-03	107	197	4	DOID:6000 (biomarker_via_orthology)
Disease	Dystonia, Paroxysmal	COL6A3 TH	6.32e-03	18	197	2	C0393588
Disease	schizophrenia, inflammatory bowel disease	EPX ZSWIM6	6.32e-03	18	197	2	EFO_0003767, MONDO_0005090

Protein segments in the cluster

Peptide	Gene	Start	Entry
APDDRPLRARREVRS	UMODL1-AS1	126	Q8N2C9
REPVRAGRVRGTLFL	ACOT1	136	Q86TX2
TVAGVILEREIPRAR	ADAD2	236	Q8NCV1
RERVNREGSLLIRPT	CEACAM18	91	A8MTB9
AARGPERRRALRVVV	CCR10	236	P46092
EFRRDARSVKLRPGE	ARAP3	956	Q8WWN8
RRESPRVGLLRCREE	ARAP3	1221	Q8WWN8
RERLGPLVEQGRVRA	APOE	196	P02649
REEAEALRERAGRLP	CCDC88B	316	A6NC98
RIRVPPDILSDDERR	CATSPERE	271	Q5SY80
AAREIRRAITGRIPD	CTBP1	331	Q13363
RVTSRERVARPLPAE	DNMT1	206	P26358
RRRPIRVLSLFDGIA	DNMT3B	571	Q9UBC3
EIERQRRERRYILPD	CCAR1	711	Q8IX12
EREAVRPGVLRSRAE	ADO	161	Q96SZ5
EHRRPRETRVIAVLG	CIITA	406	P33076
LLANAPERVVERRRR	ATP13A1	881	Q9HD20
VGPVEQEGVRRARER	GTPBP3	311	Q969Y2
EGRFRAELLRALPAE	ACTL9	351	Q8TC94
AAFREALREIERRPA	ARHGEF16	396	Q5VV41
RIIDPRRGTLVAERE	CORO1B	201	Q9BR76
VRREPVRVGRVRGTL	ACOT2	196	P49753
DGRLRDPFRITALRV	PPP2R2D	146	Q66LE6
PSVERERALARGLVR	DNHD1	2551	Q96M86
VRPRSVEVGLEERRG	ADCY5	151	O95622
VTPERRERLRQSGER	CAVIN4	226	Q5BKX8
RQEFIRIRPNREGDR	DDX27	436	Q96GQ7
RIRPNREGDREAIVA	DDX27	441	Q96GQ7
PVEALTELRERRLGA	ANTKMT	6	Q9BQD7
RGVRRISPITRAEEF	ANO8	331	Q9HCE9
RDRARFTRQLIVPSE	AP3B2	576	Q13367
TRILAFREGRVEQVP	CHM	261	P24386
RVVRAEPRAGFAVVR	RNF32-DT	76	Q8NI28
PRELAERGVRIISRG	PCDHGA7	56	Q9Y5G6
RARRAEDGIVLDLPL	PBLD	111	P30039
ELDTVIGRERRPRLS	CYP1A2	346	P05177
LDPALRRAGRFDREI	NVL	416	O15381
RVAGRLRTDIRGPLE	NIBAN3	351	Q86XR2
LRPEEGRRLVEDVAR	PTPRN2	521	Q92932
SSRREEPAGEERRRP	LRCH4	391	O75427
LRVRSLPGEDLRARV	PEX10	201	O60683
LVAQRRGAAPLRRRE	CAPN15	441	O75808
LPAAGRVVVRRLAVR	LAP3	6	P28838
IETSRPRELGDRARL	MDGA1	806	Q8NFP4
RAGPVRLTVRERTVA	OBSL1	1706	O75147
APRELAERGVRIVSR	PCDHGA4	86	Q9Y5G9
ELRRREREPDGELLV	OTUD7B	826	Q6GQQ9
VLREGERLTLPRLAD	GGT3P	201	A6NGU5
PRDRVLFIVATDLGR	DCHS1	2031	Q96JQ0
RRRTPAEIREEFERL	DNAJC11	96	Q9NVH1
QERRREPDRALVVIG	KLHL33	201	A6NCF5
ERVRFGLVPADVLRR	KLHL34	221	Q8N239
IVLLPAEARERSRGR	MATN2	16	O00339
ELRRRGLPVARVADA	MAEL	21	Q96JY0
EEERAGARPRVAARR	MAGEB4	311	O15481
SRLRESFGDPKERVR	MGAT4B	226	Q9UQ53
RPRVIESLRGIEVVD	HERC2	4081	O95714
RTRLPRTIADFRGRD	HERC2	4726	O95714
EPALSRIREDRRRIV	GALNT9	256	Q9HCQ5
AERERRRELLLTGPG	LRRC47	16	Q8N1G4
PRIERSRLDGTERVV	LRP1	2031	Q07954
VEPAERPSRARLELR	GDF1	136	P27539
LRLLEDPERRQVRSG	EXD2	491	Q9NVH0
DPERRQVRSGARALL	EXD2	496	Q9NVH0
SLDRAGAERVRIPLE	MBD3L5	126	A6NJ08
RGLIRTFQRPDRVEL	ICAM5	111	Q9UMF0
PRELAERRVRIVSRG	PCDHGA9	56	Q9Y5G4
RELAERGVRIVSRGR	PCDHGA10	61	Q9Y5H3
IVRFPNERLTSDRGR	EPX	206	P11678
AELRRFDGVQDPRIL	PGRMC1	76	O00264
SAERPLRDRRVVGLE	PDE9A	101	O76083
SEPEGVREALRRAFL	PPM1N	131	Q8N819
SGLERLRREPERLAE	COG8	56	Q96MW5
RAVAGAIARQRERLP	DOK3	301	Q7L591
VEFVPRQLGLTERRV	EPHB3	396	P54753
REREGGPIREESRLT	GLI1	416	P08151
ERRGRLQLEIRAPTA	PRKCG	156	P05129
VRRTLFITGLPRDAR	TMEM63A	226	O94886
ESIRRGEVPAELRRL	NSFL1C	211	Q9UNZ2
TEGRRFRVVVVDSRP	EIF2B4	351	Q9UI10
RRGARPERLPVFDEE	DSTYK	866	Q6XUX3
GLEDPLRLRRAESTR	ERCC8	11	Q13216
RPSGFREAAVLQEIR	IRGC	181	Q6NXR0
RLREAGVADPRIFLV	IRGC	201	Q6NXR0
LERTAIRRVPGEAFR	LRIT1	66	Q9P2V4
RRRRAVPAEGVRTAE	MOGS	6	Q13724
ELREVRRVAPRFSIL	PTPRS	236	Q13332
ARGRRLEETLPRRIG	KIF19	541	Q2TAC6
PRVRVEELGEASALR	OBSCN	156	Q5VST9
PRELAERGVRIVSRG	PCDHGA3	56	Q9Y5H0
AELGPRRLRGEVERL	GAL3ST2	296	Q9H3Q3
VERRELLPAAAPRER	EDA	6	Q92838
SVRVPARVLLRAGAR	ECI1	6	P42126
RILTGPVVREEVSRR	CHD9	2616	Q3L8U1
TRRLRFRLERAPGET	HECTD1	996	Q9ULT8
FRLERAPGETALIDR	HECTD1	1001	Q9ULT8
PEERLRRVAERVAAR	GIMAP1	236	Q8WWP7
PDVSTRERLAGRIRL	GSC2	151	O15499
EIDAADGRRVRPRAP	DACT3	481	Q96B18
AGEVVRGRDPRRLRT	DOCK8-AS1	31	Q5T8R8
IDRRIARFVLPVGAT	SLC1A7	361	O00341
EVEGRLPARSEQARR	FNBP1	481	Q96RU3
DALRPARVARVAREE	DHH	306	O43323
RRKSFIAEPGREIVR	FRMPD2	761	Q68DX3
TQPGEVVDLRIRAAR	CPAMD8	596	Q8IZJ3
RDFVSRIVRRLNIGP	COL6A3	1456	P12111
FTDAVIRERRRTLPT	CYP4F12	266	Q9HCS2
IRERRRTLPTQGIDD	CYP4F12	271	Q9HCS2
VTRRIPAEGRVALAR	GRHPR	11	Q9UBQ7
EGVLDRLVDRRERPL	BMPR2	881	Q13873
RLVDRRERPLEGGRT	BMPR2	886	Q13873
EFSPRRVRIRLSDAR	CADM4	81	Q8NFZ8
LVERGRRHEVERAPE	DIDO1	1401	Q9BTC0
RILRTLRDFPAEERA	ANKRD9	131	Q96BM1
ETPRRGFRRLSLDIQ	BRWD1	686	Q9NSI6
RSLRGEEPVPRERDR	LURAP1L	26	Q8IV03
ESGRVRAEERLRPTR	LUZP1	1056	Q86V48
GRIVPRGIDRLERTR	HASPIN	321	Q8TF76
RLSRDPDVAREAVRL	INSC	496	Q1MX18
TDRRLRGQVPRVTFL	ITGA7	576	Q13683
RRVRGREVSPSDVRE	AHCTF1	1936	Q8WYP5
EVFVISLARRPDRRE	CERCAM	321	Q5T4B2
RALVRTRTERIPLFD	CCDC198	276	Q9NVL8
VRRERPLDRATDPAA	C1orf159	356	Q96HA4
LPVRALFTRGEDRDR	DUSP6	71	Q16828
ILPAEEEVRARLRSG	DUSP4	86	Q13115
GRESREERLSPRETR	PPP1R18	136	Q6NYC8
EERLSPRETRERRLG	PPP1R18	141	Q6NYC8
FRRDEEGRRPLTVVL	NLRP6	186	P59044
LSREPLRDGRVFTVR	NEURL4	76	Q96JN8
CERRLERGQDIRIPT	CKMT1A	396	P12532
VLREGERLTLPRLAD	GGT2P	201	P36268
SLDRAGAERVRIPLE	MBD3L4	126	A6NDZ8
FLEETLVRRELPGVR	OGFR	236	Q9NZT2
LSRGDPVRVLARRVR	PHF1	536	O43189
ARLRGIRVLAEFDTP	HEXA	246	P06865
ERRVRFLLEPAVVVA	GRIN3B	931	O60391
DRFGDLERLRMRVTP	RUNX3	196	Q13761
SVLAELRRSREREGP	RUSC2	1351	Q8N2Y8
VPAARTGILQEARRR	SYNPO2L	616	Q9H987
LREVSAAREEVPGRR	ATP6V1B1	301	P15313
FVETRLRDLPDTPRR	TRIM39	361	Q9HCM9
LSPDRRGVRLAERRQ	TRIM41	446	Q8WV44
RAGFEASDPRIIRLI	TAF10	141	Q12962
RQDRPVREGTRVASI	PHF2	916	O75151
DPALRRPGRFDREVV	SPATA5L1	351	Q9BVQ7
TEDILIAAPSRRRIR	NHS	451	Q6T4R5
VEQLRPERLRGDGDR	ENDOG	96	Q14249
RNEISPRSGLIRVRE	GARS1	331	P41250
RNLPERRGRGRELEE	PSD4	946	Q8NDX1
RREEVNDRPVRRSGP	PRRC2C	1001	Q9Y520
EARTIRVTPVRGRER	RNF26	341	Q9BY78
RVTPVRGRERLNEEE	RNF26	346	Q9BY78
GARAVRVDVRLPRQD	RNF215	56	Q9Y6U7
PRARPERLAEAETRA	SHROOM2	6	Q13796
GVPVEEDVGRERRRR	SLC38A7	356	Q9NVC3
LVIPGIVDFERIRRA	TBATA	41	Q96M53
PFRSREGVRESEPVR	STARD9	2151	Q9P2P6
VERDLRIGRRFREQP	INTS5	841	Q6P9B9
ELPARTRERIRGARL	TEX45	136	Q8NA69
FPVEAGLLRRSDRVL	NOXO1	56	Q8NFA2
ERLRAEPVGTFLVRD	SOCS1	91	O15524
TTQVRRRRFERAIGP	PRG4	1296	Q92954
DAFRPEGRRSVLRTI	STRC	661	Q7RTU9
VDLVRRGRDLSARRP	SPTBN5	696	Q9NRC6
PGVERVLRDLRIFRI	ACADVL	446	P49748
ARPGRLRERVLELAR	CNNM3	281	Q8NE01
RGRERSRPIASILEE	CDK5RAP1	271	Q96SZ6
LADFREPAVRSRLIV	ZCCHC2	161	Q9C0B9
DPRRQELLEARFTGV	TLK1	56	Q9UKI8
MRRERPELRDAEGRL	nan	1	Q96NJ1
PRVARRALSPRVAAE	ZC3H3	321	Q8IXZ2
RLSTADGRVELPERR	TTBK1	461	Q5TCY1
SPGRAGRELVELRVR	MISP3	26	Q96FF7
TFDPERVERERRLIR	SPEN	796	Q96T58
AEGPRAVFVLLEERR	TFE3	16	P19532
EPRIADLRERQRALG	SPTBN2	1541	O15020
ELRAPGSVAERRRLF	SPEG	456	Q15772
TLLTERGLPRRREFV	STAU1	306	O95793
TEPERARERRSPERG	TBX2	391	Q13207
FRDEGRVLRRLPNRI	ARHGAP23	631	Q9P227
AERSGLRVVRVPADL	SPR	56	P35270
VARREARPARARGEI	SCARF2	631	Q96GP6
GVALLPFVDERRLRA	XRN2	646	Q9H0D6
LRVLGRDETGRLRVV	TNXB	966	P22105
PRFRRLRQERESLGL	PRRC2B	1311	Q5JSZ5
GRRDSLFIPIRARER	SCN8A	596	Q9UQD0
PTVCGVEELRRRRRE	TMCO6	11	Q96DC7
RRRRREAAEDPAGRV	TMDD1	86	P0DPE3
ARALRRSGRPDVARE	TMDD1	131	P0DPE3
ITERGALDEPLARRF	PIM3	136	Q86V86
TRIDLGERPVVQRRE	TBC1D15	301	Q8TC07
GDLGIVRRRSRDVPE	YJU2B	291	P13994
RDRGELRIREYPERG	YLPM1	1366	P49750
SQRPVRLGERVALRV	NEURL3	51	Q96EH8
PRRRVNIFGEELERL	TOB1	21	P50616
LREDFVRPLREGILE	ZNFX1	376	Q9P2E3
EVAGPREALARLREL	ZNF446	36	Q9NWS9
RGRRLREESILPVSA	ZNF469	2611	Q96JG9
SVGRFRVARIPEQRT	RELT	346	Q969Z4
DETRLPFRRGIALLE	ZSWIM6	201	Q9HCJ5
RIPVLSREGRTRDRQ	ZNF205	96	O95201
LPTLRAVGDVLRDRF	WNT1	236	P04628
TRGVGRFRELLRAVE	TTC7B	236	Q86TV6
RLQEARAREATRGPV	SNAPC4	901	Q5SXM2
DAFRPEGRRSVLRTI	STRCP1	661	A6NGW2
LRQRFRGLLRPEDRT	TBC1D20	341	Q96BZ9
GSARPSRLERVAREI	PLEKHG2	96	Q9H7P9
EAEVLVRGLRSFPLR	ZMYND10	11	O75800
TRRLIAERARGRPAA	WNK2	81	Q9Y3S1
RRLRERGEPIRLFGE	PRPF18	86	Q99633
PRRRADLFGEELERL	TOB2	21	Q14106
LPSERDGFLRRIREI	WNK4	726	Q96J92
RREAEANRRPLPELV	USP13	521	Q92995
RSPRFIGRRQSLIED	TH	61	P07101
LAAGDAIAEIRRLRP	DUSP23	116	Q9BVJ7
RAELLRFPERSTEIG	DTYMK	36	P23919
LVERLSESRPIRRAA	NCBP2AS2	16	Q69YL0