Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctiontype 2 fibroblast growth factor receptor binding

FGF8 FGF17

7.68e-055562GO:0005111
GeneOntologyMolecularFunctiontype 1 fibroblast growth factor receptor binding

FGF8 FGF17

1.15e-046562GO:0005105
GeneOntologyMolecularFunctionmicrofilament motor activity

MYO1C MYH7B MYO15A

1.64e-0438563GO:0000146
GeneOntologyMolecularFunctionactin filament binding

MYO1C MYH7B PLEC MYO15A ABLIM3

4.33e-04227565GO:0051015
MousePhenothoracic vertebral transformation

HOXA6 HOXB8 HOXC6 HOXC9

2.72e-0551484MP:0004618
DomainIQ

IQCF5 MYO1C MYH7B SCN7A SCN9A CAMTA2 CAMTA1 MYO15A

9.07e-1181558SM00015
DomainIQ_motif_EF-hand-BS

IQCF5 MYO1C MYH7B SCN7A SCN9A CAMTA2 CAMTA1 MYO15A

2.14e-1090558IPR000048
DomainIQ

IQCF5 MYO1C MYH7B SCN9A CAMTA2 CAMTA1 MYO15A

1.01e-0893557PS50096
DomainIQ

IQCF5 MYO1C SCN9A CAMTA2 CAMTA1 MYO15A

6.09e-0871556PF00612
DomainHomeobox_metazoa

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

6.68e-0690555IPR020479
DomainCG-1

CAMTA2 CAMTA1

8.51e-062552PF03859
DomainCG-1

CAMTA2 CAMTA1

8.51e-062552SM01076
DomainCG-1_dom

CAMTA2 CAMTA1

8.51e-062552IPR005559
DomainCG_1

CAMTA2 CAMTA1

8.51e-062552PS51437
DomainHomeobox_Antennapedia_CS

HOXA6 HOXB8 HOXC6

3.10e-0521553IPR001827
DomainANTENNAPEDIA

HOXA6 HOXB8 HOXC6

4.68e-0524553PS00032
DomainTIG

CAMTA2 CAMTA1 EBF4

1.02e-0431553PF01833
DomainIPT

CAMTA2 CAMTA1 EBF4

1.13e-0432553IPR002909
DomainMyosin_head_motor_dom

MYO1C MYH7B MYO15A

1.89e-0438553IPR001609
DomainMYOSIN_MOTOR

MYO1C MYH7B MYO15A

1.89e-0438553PS51456
DomainMyosin_head

MYO1C MYH7B MYO15A

1.89e-0438553PF00063
DomainMYSc

MYO1C MYH7B MYO15A

1.89e-0438553SM00242
DomainHomeobox_CS

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

2.16e-04186555IPR017970
DomainNa_channel_asu

SCN7A SCN9A

3.77e-0410552IPR001696
DomainNa_trans_assoc

SCN7A SCN9A

3.77e-0410552IPR010526
DomainNa_trans_assoc

SCN7A SCN9A

3.77e-0410552PF06512
DomainHomeobox

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

6.18e-04234555PF00046
DomainHOMEOBOX_1

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

6.42e-04236555PS00027
DomainHOX

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

6.54e-04237555SM00389
DomainHOMEOBOX_2

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

6.80e-04239555PS50071
DomainHomeobox_dom

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

6.80e-04239555IPR001356
Domain-

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

1.44e-032835551.10.10.60
DomainUIM

ANKRD13D PARP10

1.72e-0321552SM00726
DomainMHC_I

PROCR HLA-H

1.72e-0321552PF00129
DomainMHC_I_a_a1/a2

PROCR HLA-H

1.72e-0321552IPR001039
DomainFGF

FGF8 FGF17

1.89e-0322552SM00442
DomainFGF

FGF8 FGF17

1.89e-0322552PF00167
DomainHBGF_FGF

FGF8 FGF17

1.89e-0322552PS00247
DomainFibroblast_GF_fam

FGF8 FGF17

1.89e-0322552IPR002209
DomainIL-1_fam/FGF_fam

FGF8 FGF17

2.07e-0323552IPR028142
DomainUIM_dom

ANKRD13D PARP10

2.45e-0325552IPR003903
DomainHomeodomain-like

HOXA6 HOXB8 HOXC6 HOXC9 NKX2-2

2.89e-03332555IPR009057
DomainIg_E-set

CAMTA2 CAMTA1 EBF4

3.57e-03104553IPR014756
DomainCytokine_IL1-like

FGF8 FGF17

5.03e-0336552IPR008996
PathwayREACTOME_FGFR3B_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

1.47e-047382M27064
PathwayREACTOME_FGFR3B_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

1.47e-047382MM14726
PathwayREACTOME_SIGNALING_BY_ACTIVATED_POINT_MUTANTS_OF_FGFR1

FGF8 FGF17

3.83e-0411382M675
PathwayREACTOME_SEROTONIN_RECEPTORS

HTR1D HTR7

3.83e-0411382MM15008
PathwayREACTOME_SEROTONIN_RECEPTORS

HTR1D HTR7

4.59e-0412382M6034
PathwayREACTOME_FGFR2C_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

4.59e-0412382MM14728
PathwayREACTOME_FGFRL1_MODULATION_OF_FGFR1_SIGNALING

FGF8 FGF17

5.42e-0413382M27540
PathwayREACTOME_FGFR2C_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

5.42e-0413382M1087
PathwayREACTOME_FGFRL1_MODULATION_OF_FGFR1_SIGNALING

FGF8 FGF17

5.42e-0413382MM15262
PathwayREACTOME_FGFR3_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

5.42e-0413382M27061
PathwayREACTOME_FGFR3_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

5.42e-0413382MM14723
PathwayREACTOME_FGFR1C_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

5.42e-0413382MM14727
PathwayREACTOME_FGFR1C_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

6.31e-0414382M27065
PathwayREACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE_FGFR4

FGF8 FGF17

7.27e-0415382M27509
PathwayREACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE_FGFR4

FGF8 FGF17

7.27e-0415382MM15235
PathwayREACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE_FGFR1

FGF8 FGF17

8.29e-0416382M48007
PathwayREACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE_FGFR1

FGF8 FGF17

8.29e-0416382MM15233
PathwayREACTOME_FGFR1_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

9.38e-0417382MM17066
PathwayREACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE_FGFR2

FGF8 FGF17

9.38e-0417382MM15234
PathwayREACTOME_SHC_MEDIATED_CASCADE_FGFR3

FGF8 FGF17

9.38e-0417382MM15244
PathwayREACTOME_PHOSPHOLIPASE_C_MEDIATED_CASCADE_FGFR2

FGF8 FGF17

1.05e-0318382M27508
PathwayREACTOME_SHC_MEDIATED_CASCADE_FGFR3

FGF8 FGF17

1.05e-0318382M27518
PathwayREACTOME_PI_3K_CASCADE_FGFR3

FGF8 FGF17

1.05e-0318382M27521
PathwayREACTOME_FGFR1_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

1.05e-0318382M1092
PathwayREACTOME_PI_3K_CASCADE_FGFR3

FGF8 FGF17

1.05e-0318382MM15247
PathwayREACTOME_FGFR2_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

1.05e-0318382MM14724
PathwayREACTOME_SHC_MEDIATED_CASCADE_FGFR4

FGF8 FGF17

1.18e-0319382MM15250
PathwayREACTOME_FRS_MEDIATED_FGFR3_SIGNALING

FGF8 FGF17

1.18e-0319382MM15245
PathwayREACTOME_FRS_MEDIATED_FGFR3_SIGNALING

FGF8 FGF17

1.30e-0320382M27519
PathwayREACTOME_PI_3K_CASCADE_FGFR4

FGF8 FGF17

1.30e-0320382M27525
PathwayREACTOME_SHC_MEDIATED_CASCADE_FGFR4

FGF8 FGF17

1.30e-0320382M27524
PathwayREACTOME_PI_3K_CASCADE_FGFR4

FGF8 FGF17

1.30e-0320382MM15251
PathwayREACTOME_FGFR2_LIGAND_BINDING_AND_ACTIVATION

FGF8 FGF17

1.30e-0320382M27062
PathwayREACTOME_SHC_MEDIATED_CASCADE_FGFR1

FGF8 FGF17

1.30e-0320382MM15237
PathwayREACTOME_PI_3K_CASCADE_FGFR1

FGF8 FGF17

1.44e-0321382M27512
PathwayREACTOME_SHC_MEDIATED_CASCADE_FGFR1

FGF8 FGF17

1.44e-0321382M27511
PathwayREACTOME_PI_3K_CASCADE_FGFR1

FGF8 FGF17

1.44e-0321382MM15238
PathwayREACTOME_FRS_MEDIATED_FGFR4_SIGNALING

FGF8 FGF17

1.44e-0321382MM15248
PathwayREACTOME_SHC_MEDIATED_CASCADE_FGFR2

FGF8 FGF17

1.44e-0321382MM15242
PathwayREACTOME_FRS_MEDIATED_FGFR4_SIGNALING

FGF8 FGF17

1.58e-0322382M27522
PathwayREACTOME_FRS_MEDIATED_FGFR1_SIGNALING

FGF8 FGF17

1.58e-0322382MM15239
PathwayREACTOME_PI_3K_CASCADE_FGFR2

FGF8 FGF17

1.58e-0322382MM15240
PathwayREACTOME_PI_3K_CASCADE_FGFR2

FGF8 FGF17

1.73e-0323382M27514
PathwayREACTOME_FRS_MEDIATED_FGFR1_SIGNALING

FGF8 FGF17

1.73e-0323382M27513
PathwayREACTOME_FRS_MEDIATED_FGFR2_SIGNALING

FGF8 FGF17

1.73e-0323382MM15243
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR3

FGF8 FGF17

1.88e-0324382MM15246
PathwayREACTOME_FRS_MEDIATED_FGFR2_SIGNALING

FGF8 FGF17

2.04e-0325382M27517
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR3

FGF8 FGF17

2.04e-0325382M27520
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR4

FGF8 FGF17

2.21e-0326382MM15249
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR4

FGF8 FGF17

2.38e-0327382M27523
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR2

FGF8 FGF17

2.56e-0328382MM15241
PathwayREACTOME_NEGATIVE_REGULATION_OF_FGFR3_SIGNALING

FGF8 FGF17

2.74e-0329382M27528
PathwayREACTOME_NEGATIVE_REGULATION_OF_FGFR3_SIGNALING

FGF8 FGF17

2.74e-0329382MM15253
PathwayWP_DOPAMINERGIC_NEUROGENESIS

FGF8 NKX2-2

2.93e-0330382M39580
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR2

FGF8 FGF17

2.93e-0330382M27515
PathwayWP_DOPAMINERGIC_NEUROGENESIS

FGF8 NKX2-2

2.93e-0330382MM15831
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR1

FGF8 FGF17

2.93e-0330382MM15236
PathwayREACTOME_FGFR1_MUTANT_RECEPTOR_ACTIVATION

FGF8 FGF17

3.13e-0331382M661
PathwayKEGG_MEDICUS_REFERENCE_FGF_FGFR_PI3K_SIGNALING_PATHWAY

FGF8 FGF17

3.13e-0331382M47396
PathwayREACTOME_DOWNSTREAM_SIGNALING_OF_ACTIVATED_FGFR1

FGF8 FGF17

3.13e-0331382M27510
PathwayREACTOME_NEGATIVE_REGULATION_OF_FGFR4_SIGNALING

FGF8 FGF17

3.13e-0331382M27529
PathwayREACTOME_NEGATIVE_REGULATION_OF_FGFR4_SIGNALING

FGF8 FGF17

3.13e-0331382MM15254
PathwayWP_MONOAMINE_GPCRS

HTR1D HTR7

3.13e-0331382MM15871
PathwayREACTOME_INTERACTION_BETWEEN_L1_AND_ANKYRINS

SCN7A SCN9A

3.13e-0331382M877
PathwayREACTOME_PHASE_0_RAPID_DEPOLARISATION

SCN7A SCN9A

3.33e-0332382M27455
PathwayWP_MONOAMINE_GPCRS

HTR1D HTR7

3.54e-0333382M39585
PathwayREACTOME_NEGATIVE_REGULATION_OF_FGFR1_SIGNALING

FGF8 FGF17

3.54e-0333382M27526
PathwayREACTOME_NEGATIVE_REGULATION_OF_FGFR2_SIGNALING

FGF8 FGF17

3.54e-0333382MM15252
PathwayREACTOME_FGFR2_MUTANT_RECEPTOR_ACTIVATION

FGF8 FGF17

3.54e-0333382M27049
PathwayREACTOME_NEGATIVE_REGULATION_OF_FGFR2_SIGNALING

FGF8 FGF17

3.76e-0334382M27527
PathwayKEGG_MEDICUS_REFERENCE_FGF_FGFR_RAS_ERK_SIGNALING_PATHWAY

FGF8 FGF17

3.98e-0335382M47379
PathwayREACTOME_SIGNALING_BY_FGFR1_IN_DISEASE

FGF8 FGF17

4.68e-0338382M27536
PathwayREACTOME_SIGNALING_BY_FGFR3

FGF8 FGF17

4.92e-0339382MM15257
PathwayREACTOME_SIGNALING_BY_FGFR3

FGF8 FGF17

5.17e-0340382M27532
PathwayREACTOME_SIGNALING_BY_FGFR4

FGF8 FGF17

5.17e-0340382MM15258
PathwayREACTOME_SIGNALING_BY_FGFR4

FGF8 FGF17

5.43e-0341382M27533
PathwayREACTOME_IRS_MEDIATED_SIGNALLING

FGF8 FGF17

5.43e-0341382MM14505
PathwayREACTOME_AMINE_LIGAND_BINDING_RECEPTORS

HTR1D HTR7

5.69e-0342382M5868
PathwayREACTOME_AMINE_LIGAND_BINDING_RECEPTORS

HTR1D HTR7

5.69e-0342382MM14971
PathwayREACTOME_SIGNALING_BY_FGFR2_IN_DISEASE

FGF8 FGF17

5.96e-0343382M27534
PathwayWP_CHRONIC_HYPERGLYCEMIA_IMPAIRMENT_OF_NEURON_FUNCTION

SCN9A C3

6.80e-0346382M46450
PathwayREACTOME_SIGNALING_BY_TYPE_1_INSULIN_LIKE_GROWTH_FACTOR_1_RECEPTOR_IGF1R

FGF8 FGF17

7.09e-0347382MM14885
PathwayREACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE

FGF8 FGF17

7.38e-0348382MM15441
PathwayREACTOME_IRS_MEDIATED_SIGNALLING

FGF8 FGF17

7.38e-0348382M26916
PathwayREACTOME_SIGNALING_BY_FGFR1

FGF8 FGF17

7.99e-0350382MM15255
PathwayREACTOME_SIGNALING_BY_FGFR1

FGF8 FGF17

8.62e-0352382M27530
PathwayREACTOME_SIGNALING_BY_TYPE_1_INSULIN_LIKE_GROWTH_FACTOR_1_RECEPTOR_IGF1R

FGF8 FGF17

9.27e-0354382M27168
PathwayREACTOME_INSULIN_RECEPTOR_SIGNALLING_CASCADE

FGF8 FGF17

9.27e-0354382M620
PathwayREACTOME_SENSORY_PROCESSING_OF_SOUND_BY_OUTER_HAIR_CELLS_OF_THE_COCHLEA

MYO1C MYO15A

9.60e-0355382M41823
PathwayPID_FGF_PATHWAY

FGF8 FGF17

9.60e-0355382M276
PathwayKEGG_MEDICUS_REFERENCE_RTK_PLCG_ITPR_SIGNALING_PATHWAY

FGF8 FGF17

9.60e-0355382M47952
Pubmed

Cdx and T Brachyury Co-activate Growth Signaling in the Embryonic Axial Progenitor Niche.

HOXB8 HOXC6 HOXC9 FGF8 FGF17

5.68e-094056528009287
Pubmed

Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates.

HOXA6 HOXB8 HOXC6 HOXC9 FGF8

6.46e-094156532479258
Pubmed

Enhancer timing of Hox gene expression: deletion of the endogenous Hoxc8 early enhancer.

HOXB8 HOXC6 HOXC9

1.58e-08456312917291
Pubmed

Altering the spatial determinations in the mouse embryos by manipulating the Hox genes.

HOXB8 HOXC6 HOXC9

1.58e-0845637915631
Pubmed

New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.

HOXA6 HOXB8 HOXC6 HOXC9 FGF8

1.81e-085056528188179
Pubmed

Organization of human class I homeobox genes.

HOXA6 HOXB8 HOXC6 HOXC9

4.31e-08225642576652
Pubmed

Targeted disruption of the mouse homologue of the Drosophila polyhomeotic gene leads to altered anteroposterior patterning and neural crest defects.

HOXA6 HOXB8 HOXC6 HOXC9

6.25e-08245649367423
Pubmed

Fine mapping of human HOX gene clusters.

HOXA6 HOXB8 HOXC6 HOXC9

8.77e-08265648646877
Pubmed

Critical role of the p400/mDomino chromatin-remodeling ATPase in embryonic hematopoiesis.

HOXA6 HOXB8 HOXC9 FGF8

2.10e-073256417535249
Pubmed

Sf3b4 regulates chromatin remodeler splicing and Hox expression.

HOXA6 HOXB8 HOXC6 HOXC9

2.10e-073256437167859
Pubmed

Atlas of Hox gene expression in the developing kidney.

HOXA6 HOXB8 HOXC6 HOXC9

4.27e-073856415042701
Pubmed

Complete mutation analysis panel of the 39 human HOX genes.

HOXA6 HOXB8 HOXC6 HOXC9

4.27e-073856411857506
Pubmed

Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster.

HOXA6 HOXB8 HOXC6 HOXC9

4.75e-073956433257809
Pubmed

Quantification of Hox and surfactant protein-B transcription during murine lung development.

HOXA6 HOXB8 HOXC6 HOXC9

5.27e-074056419204410
Pubmed

Reduction of Hox gene expression by histone H1 depletion.

HOXA6 HOXB8 HOXC6 HOXC9

7.10e-074356422701719
Pubmed

Nomenclature for human homeobox genes.

HOXA6 HOXB8 HOXC6 HOXC9

7.80e-07445641973146
Pubmed

Vertebrate homeobox gene nomenclature.

HOXA6 HOXB8 HOXC6 HOXC9

1.02e-06475641358459
Pubmed

Organization and expression of mouse Hox3 cluster genes.

HOXA6 HOXC6 HOXC9

1.42e-06145638099712
Pubmed

Homeotic transformations of the axial skeleton of YY1 mutant mice and genetic interaction with the Polycomb group gene Ring1/Ring1A.

HOXB8 HOXC6 HOXC9

2.18e-061656316624538
Pubmed

Hox genes and the evolution of vertebrate axial morphology.

HOXB8 HOXC6 HOXC9

2.18e-06165637768176
Pubmed

Ataxia and Purkinje cell degeneration in mice lacking the CAMTA1 transcription factor.

CAMTA2 CAMTA1

2.55e-06256225049392
Pubmed

A novel family of calmodulin-binding transcription activators in multicellular organisms.

CAMTA2 CAMTA1

2.55e-06256211925432
Pubmed

SHH propagates distal limb bud development by enhancing CYP26B1-mediated retinoic acid clearance via AER-FGF signalling.

HOXC6 PKDCC FGF8

2.65e-061756321471156
Pubmed

Hox patterning of the vertebrate rib cage.

HOXA6 HOXC6 HOXC9

2.65e-061756317626057
Pubmed

Genetic and functional modularity of Hox activities in the specification of limb-innervating motor neurons.

HOXA6 HOXC6 HOXC9

3.17e-061856323359544
Pubmed

The mouse PcG gene eed is required for Hox gene repression and extraembryonic development.

HOXA6 HOXB8 HOXC6

4.42e-062056312370779
Pubmed

Growth arrest specific gene 1 acts as a region-specific mediator of the Fgf10/Fgf8 regulatory loop in the limb.

HOXB8 FGF8 FGF17

5.15e-062156312399319
Pubmed

Crypto-rhombomeres of the mouse medulla oblongata, defined by molecular and morphological features.

HOXA6 HOXB8 HOXC6

5.15e-062156325381007
Pubmed

Up-regulation of the fibroblast growth factor 8 subfamily in human hepatocellular carcinoma for cell survival and neoangiogenesis.

FGF8 FGF17

7.63e-06356221319186
Pubmed

Comparison of the expression of three highly related genes, Fgf8, Fgf17 and Fgf18, in the mouse embryo.

FGF8 FGF17

7.63e-0635629651520
Pubmed

Motor neuron columnar fate imposed by sequential phases of Hox-c activity.

HOXC6 HOXC9

7.63e-06356214586461
Pubmed

Frontal cortex subdivision patterning is coordinately regulated by Fgf8, Fgf17, and Emx2.

FGF8 FGF17

7.63e-06356218459137
Pubmed

Fgfr2 and Fgfr3 are not required for patterning and maintenance of the midbrain and anterior hindbrain.

FGF8 NKX2-2 FGF17

1.00e-052656317150206
Pubmed

Gli3 coordinates three-dimensional patterning and growth of the tectum and cerebellum by integrating Shh and Fgf8 signaling.

FGF8 NKX2-2 FGF17

1.13e-052756318480159
Pubmed

The human HOX gene family.

HOXB8 HOXC6 HOXC9

1.40e-05295632574852
Pubmed

Evolution and diversity of mammalian sodium channel genes.

SCN7A SCN9A

1.52e-05456210198179
Pubmed

Isolation and regional localization of the murine homeobox-containing gene Hox-3.3 to mouse chromosome region 15E.

HOXC6 HOXC9

1.52e-0545622570032
Pubmed

Structural basis by which alternative splicing modulates the organizer activity of FGF8 in the brain.

FGF8 FGF17

1.52e-05456216384934
Pubmed

Fgf signaling controls the telencephalic distribution of Fgf-expressing progenitors generated in the rostral patterning center.

FGF8 FGF17

1.52e-05456225889070
Pubmed

Multiple roles of mesenchymal beta-catenin during murine limb patterning.

HOXC6 FGF8 FGF17

1.56e-053056316495310
Pubmed

GDE2 regulates subtype-specific motor neuron generation through inhibition of Notch signaling.

HOXC6 HOXC9 NKX2-2

1.56e-053056321943603
Pubmed

MiR-302/367 regulate neural progenitor proliferation, differentiation timing, and survival in neurulation.

FGF8 NKX2-2 FGF17

1.90e-053256326441343
Pubmed

Hox repertoires for motor neuron diversity and connectivity gated by a single accessory factor, FoxP1.

HOXA6 HOXC6 HOXC9

2.08e-053356318662545
Pubmed

5-hydroxytryptamine synthesized in the aorta-gonad-mesonephros regulates hematopoietic stem and progenitor cell survival.

HTR1D HTR7 NKX2-2

2.49e-053556328031476
Pubmed

Neuromuscular synapse integrity requires linkage of acetylcholine receptors to postsynaptic intermediate filament networks via rapsyn-plectin 1f complexes.

PARP10 PLEC

2.54e-05556225318670
Pubmed

FGF signaling acts upstream of the NOTCH and WNT signaling pathways to control segmentation clock oscillations in mouse somitogenesis.

FGF8 FGF17

2.54e-05556217965051
Pubmed

The Fgf8 subfamily (Fgf8, Fgf17 and Fgf18) is required for closure of the embryonic ventral body wall.

FGF8 FGF17

2.54e-05556232907848
Pubmed

Global control of motor neuron topography mediated by the repressive actions of a single hox gene.

HOXA6 HOXC6 HOXC9

2.72e-053656320826310
Pubmed

Identification of 10 murine homeobox genes.

HOXA6 HOXB8 HOXC6

3.20e-05385631683707
Pubmed

The microRNA-processing enzyme Dicer is dispensable for somite segmentation but essential for limb bud positioning.

HOXB8 HOXC9 FGF8

3.74e-054056321256124
Pubmed

FGF ligand family mRNA expression profile for mouse preimplantation embryos, early gestation human placenta, and mouse trophoblast stem cells.

FGF8 FGF17

3.80e-05656216470835
Pubmed

Generation of conditional Hoxc8 loss-of-function and Hoxc8-->Hoxc9 replacement alleles in mice.

HOXC6 HOXC9

3.80e-05656219621436
Pubmed

Targeted disruptions of the murine Hoxa-4 and Hoxa-6 genes result in homeotic transformations of components of the vertebral column.

HOXA6 HOXC6

3.80e-0565627918106
Pubmed

Genomic structure, mapping, activity and expression of fibroblast growth factor 17.

FGF8 FGF17

3.80e-05656210381577
Pubmed

Glypican-1 controls brain size through regulation of fibroblast growth factor signaling in early neurogenesis.

FGF8 FGF17

3.80e-05656219732411
Pubmed

A mutation in mouse Pak1ip1 causes orofacial clefting while human PAK1IP1 maps to 6p24 translocation breaking points associated with orofacial clefting.

FGF8 FGF17

3.80e-05656223935987
Pubmed

Molecular characterization, structure and developmental expression of Megane bHLH factor.

FGF8 NKX2-2

3.80e-05656216644143
Pubmed

The signaling pathway mediated by the type IIB activin receptor controls axial patterning and lateral asymmetry in the mouse.

HOXC6 HOXC9

3.80e-0565629242489
Pubmed

A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.

HOXA6 HOXB8 HOXC6 HOXC9

4.04e-0511856416971476
Pubmed

Interactome and Ubiquitinome Analyses Identify Functional Targets of Herpes Simplex Virus 1 Infected Cell Protein 0.

MYO1C COPB1 FAM91A1 PLEC

4.90e-0512456435516420
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

PALD1 TENM4 KANSL1 FAM91A1 CAMTA2 CAMTA1

4.90e-0540756612693553
Pubmed

Arthritis in MRL/lpr mice is under the control of multiple gene loci with an allelic combination derived from the original inbred strains.

CSF2RA FGF8

5.32e-05756211953986
Pubmed

Myosins: a diverse superfamily.

MYO1C MYO15A

5.32e-05756210722873
Pubmed

A combination of activation and repression by a colinear Hox code controls forelimb-restricted expression of Tbx5 and reveals Hox protein specificity.

HOXC6 HOXC9

5.32e-05756224651482
Pubmed

Developmental origins of precocial forelimbs in marsupial neonates.

HOXC6 FGF8

5.32e-05756221098569
Pubmed

FGF8 acts as a classic diffusible morphogen to pattern the neocortex.

FGF8 FGF17

5.32e-05756220843859
Pubmed

The murine Ten-m/Odz genes show distinct but overlapping expression patterns during development and in adult brain.

TENM4 FGF8

5.32e-05756212915301
Pubmed

Conditional inactivation of Fgf4 reveals complexity of signalling during limb bud development.

FGF8 FGF17

7.09e-05856210802662
Pubmed

Mouse Hox-3.4: homeobox sequence and embryonic expression patterns compared with other members of the Hox gene network.

HOXA6 HOXC6

7.09e-0585621976088
Pubmed

FGF17b and FGF18 have different midbrain regulatory properties from FGF8b or activated FGF receptors.

FGF8 FGF17

7.09e-05856214602678
Pubmed

The extent of synaptic stripping of motoneurons after axotomy is not correlated to activation of surrounding glia or downregulation of postsynaptic adhesion molecules.

HLA-H C3

7.09e-05856223527240
Pubmed

Extent of the mouse t complex and its inversions shown by in situ hybridization.

HLA-H C3

7.09e-0585623356450
Pubmed

A genome-wide association study of the Protein C anticoagulant pathway.

MYH7B PROCR

7.09e-05856222216198
Pubmed

Interactions between FGF and Wnt signals and Tbx3 gene expression in mammary gland initiation in mouse embryos.

FGF8 FGF17

7.09e-05856215255957
Pubmed

Altered cellular proliferation and mesoderm patterning in Polycomb-M33-deficient mice.

HOXA6 HOXC6

9.10e-0595629043087
Pubmed

Genetic subdivision of the tectum and cerebellum into functionally related regions based on differential sensitivity to engrailed proteins.

FGF8 FGF17

9.10e-05956217537797
Pubmed

Structures of the tyrosine kinase domain of fibroblast growth factor receptor in complex with inhibitors.

FGF8 FGF17

9.10e-0595629139660
Pubmed

Mutations in FGF17, IL17RD, DUSP6, SPRY4, and FLRT3 are identified in individuals with congenital hypogonadotropic hypogonadism.

FGF8 FGF17

9.10e-05956223643382
Pubmed

Autocrine and paracrine mechanisms regulating primordial germ cell proliferation.

FGF8 FGF17

9.10e-05956215039943
Pubmed

The duration of Fgf8 isthmic organizer expression is key to patterning different tectal-isthmo-cerebellum structures.

FGF8 FGF17

9.10e-05956219793884
Pubmed

Hoxc gene collinear expression and epigenetic modifications established during embryogenesis are maintained until after birth.

HOXC6 HOXC9

9.10e-05956224155669
Pubmed

Tonotopic gradient in the developmental acquisition of sensory transduction in outer hair cells of the mouse cochlea.

MYO1C MYO15A

9.10e-05956219339464
Pubmed

Identification of the murine Hox-c12 and Hox-c13 homeoboxes on yeast artificial chromosomes.

HOXC6 HOXC9

9.10e-0595627959778
Pubmed

Sp1 phosphorylation by cyclin-dependent kinase 1/cyclin B1 represses its DNA-binding activity during mitosis in cancer cells.

MYO1C MYH7B PLEC

9.25e-055456322266860
Pubmed

A census of human transcription factors: function, expression and evolution.

HOXA6 HOXB8 HOXC6 HOXC9 CAMTA2 NKX2-2 CAMTA1 EBF4

9.81e-0590856819274049
Pubmed

Expression and functional analysis of Tgif during mouse midline development.

FGF8 NKX2-2

1.14e-041056216284942
Pubmed

Genetic evidence that FGFs have an instructive role in limb proximal-distal patterning.

FGF8 FGF17

1.14e-041056218449196
Pubmed

All-trans retinoic acid-induced ectopic limb and caudal structures: murine strain sensitivities and pathogenesis.

HOXB8 FGF8

1.14e-041056218498097
Pubmed

A long pentraxin-3-derived pentapeptide for the therapy of FGF8b-driven steroid hormone-regulated cancers.

FGF8 FGF17

1.14e-041056225912421
Pubmed

Targeted inactivation of a developmentally regulated neural plectin isoform (plectin 1c) in mice leads to reduced motor nerve conduction velocity.

PARP10 PLEC

1.14e-041056219625254
Pubmed

Laminar patterning in the developing neocortex by temporally coordinated fibroblast growth factor signaling.

FGF8 FGF17

1.14e-041056215470137
Pubmed

Developmental nonlinearity drives phenotypic robustness.

FGF8 FGF17

1.14e-041056229213092
Pubmed

Intersubspecific subcongenic mouse strain analysis reveals closely linked QTLs with opposite effects on body weight.

SCN7A SCN9A

1.14e-041056221451961
Pubmed

The canonical Wnt/β-catenin signaling pathway regulates Fgf signaling for early facial development.

FGF8 FGF17

1.14e-041056221070765
Pubmed

Mesenchymal Hox6 function is required for mouse pancreatic endocrine cell differentiation.

HOXA6 HOXC6 NKX2-2

1.21e-045956326450967
Pubmed

Fibroblast growth factor-derived peptides: functional agonists of the fibroblast growth factor receptor.

FGF8 FGF17

1.39e-041156218199118
Pubmed

Variants of dopamine and serotonin candidate genes as predictors of response to risperidone treatment in first-episode schizophrenia.

HTR1D HTR7

1.39e-041156218855532
Pubmed

PI3K class II α controls spatially restricted endosomal PtdIns3P and Rab11 activation to promote primary cilium function.

FGF8 NKX2-2

1.39e-041156224697898
Pubmed

Cognate homeo-box loci mapped on homologous human and mouse chromosomes.

HOXC6 HOXC9

1.39e-04115622878432
Pubmed

Emx2 patterns the neocortex by regulating FGF positional signaling.

FGF8 FGF17

1.39e-041156212872126
InteractionPSME3 interactions

PTPN7 KANSL1 FAM91A1 CHD8 CAMTA2 PLEC TSPYL1 IMP3

1.17e-05398558int:PSME3
Cytoband11q13.2

ANKRD13D TMEM151A

1.53e-034756211q13.2
Cytoband12q13.3

HOXC6 HOXC9

1.79e-035156212q13.3
GeneFamilyHOXL subclass homeoboxes

HOXA6 HOXB8 HOXC6 HOXC9

1.81e-0652314518
GeneFamily5-hydroxytryptamine receptors, G protein-coupled

HTR1D HTR7

2.19e-0413312170
ToppCellFrontal_cortex-Neuronal-Inhibitory-iN2(Gad1Gad2)-Synpr-Inhibitory_Neuron.Gad1Gad2.Synpr-Crispld2_(Neuron.Gad1Gad2.Synpr-Crispld2)-|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

ADAD1 C3 MYO15A SLC14A2

1.56e-0667564f117cec517d15bff2d4b963c5791877426272631
ToppCellFrontal_cortex-Neuronal-Inhibitory-iN2(Gad1Gad2)-Synpr-Inhibitory_Neuron.Gad1Gad2.Synpr-Crispld2_(Neuron.Gad1Gad2.Synpr-Crispld2)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

ADAD1 C3 MYO15A SLC14A2

1.56e-0667564df06046269894edbc872b48b9eccb458f6be8cf2
ToppCelldroplet-Thymus-nan-21m-Myeloid-Macrophage|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXC6 CSF2RA HTR7 SPINT1 PROCR

1.82e-06161565441ebd3c029861d833fbcf8a68fc740d9de8ef2f
ToppCellBAL-Severe-Myeloid-cDC-cDC-cDC_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

PALD1 TENM4 PROCR VASH1 SCN9A

2.24e-06168565d60f7cd8269f373827f49c7785002cb38e4570a9
ToppCellBAL-Severe-Myeloid-cDC-cDC-cDC_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PALD1 TENM4 PROCR VASH1 SCN9A

2.31e-06169565ccd98f9005aa0a88bd49f153be4e7200cc3dd0ac
ToppCellCerebellum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Pvalb-Inhibitory_Neuron.Gad1Gad2.Pvalb-Chrm2_(Cerebellum_basket_cells_4)|Cerebellum / BrainAtlas - Mouse McCarroll V32

PTPN7 HTR1D HTR7 EBF4

3.17e-068056454f520cca126810510479fbeade2e3f66fb5dd1b
ToppCellCerebellum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Pvalb-Inhibitory_Neuron.Gad1Gad2.Pvalb-Chrm2_(Cerebellum_basket_cells_4)-|Cerebellum / BrainAtlas - Mouse McCarroll V32

PTPN7 HTR1D HTR7 EBF4

3.17e-0680564ce38ea123853a1e1082a033fb779b63ea440661d
ToppCellGlobus_pallidus-Neuronal-Inhibitory|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

HTR7 CAMTA1 ABLIM3 CDH12 EBF4

3.31e-0618256504ccfa951eaa31fed6d140edb6c702d49363c5fa
ToppCellfacs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

IQCF5 HOXC6 HOXC9 OFCC1 EBF4

3.68e-06186565bdc87e4631a8ea73e262e541aa84a28f24c94b00
ToppCellIPF-Myeloid-cDC1|Myeloid / Disease state, Lineage and Cell class

PALD1 TENM4 CSF2RA NLRC5 EBF4

3.88e-0618856547bb6caf84f70a1cda7d09803afdfd5182772e66
ToppCell3'_v3-Lung-Myeloid_Dendritic-DC2|Lung / Manually curated celltypes from each tissue

PALD1 CSF2RA VASH1 SCN9A C3

4.09e-06190565468525c05e38158a3b8a445882b2d63dfb1d2c63
ToppCellLAM-Myeloid-DC|Myeloid / Condition, Lineage and Cell class

PALD1 PTPN7 CSF2RA SCN9A C3

4.41e-06193565f665cce40053ae5d6e28f9f70ddf78e8598c9514
ToppCell10x5'-Lung-Myeloid_Dendritic-DC2|Lung / Manually curated celltypes from each tissue

PALD1 CSF2RA HTR7 VASH1 SCN9A

4.41e-06193565c97f9b13057f803df63c696c6175ef8e0aba6fa7
ToppCell10x5'-Lung-Myeloid_Dendritic|Lung / Manually curated celltypes from each tissue

PALD1 CSF2RA HTR7 VASH1 SCN9A

4.41e-061935657bce609699c515d2d114596a0c527f90cc09c4af
ToppCell(010)_cDC|World / immune cells in Peripheral Blood (logTPM normalization)

PALD1 CSF2RA HTR7 SPINT1 SCN9A

4.64e-061955654aabb3f5ce70100e4d98d7fa9f8d12e84fb9fe3d
ToppCellBronchial-10x5prime-Immune_Myeloid-Macrophage_other-Macro_AW_CX3CR1|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

PALD1 CSF2RA HTR7 VASH1 C3

4.75e-06196565b15812354128c12a588d79ef449d787e74835f3b
ToppCellParenchymal-10x5prime-Stromal-Peri/Epineurial_-NAF_epineurial|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

HOXA6 SCN7A PKDCC C3 ABLIM3

5.25e-0620056536de49593cf6ff1c9229fcceb150c1d68658a360
ToppCellEntopeduncular-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Lhx8-Inhibitory_Neuron.Gad1Gad2-Chat_(Nucleus_basalis_(NB))|Entopeduncular / BrainAtlas - Mouse McCarroll V32

MYH7B SCN7A SCN9A PIWIL2

1.25e-0511356479ba2eb8f85e5da4c19c838df881c18ffdc450fb
ToppCellEntopeduncular-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Lhx8|Entopeduncular / BrainAtlas - Mouse McCarroll V32

MYH7B SCN7A SCN9A PIWIL2

1.25e-0511356491d55fe6fb1c1472867d74461f5b9e4f17db01cd
ToppCellEntopeduncular-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Lhx8-Inhibitory_Neuron.Gad1Gad2-Chat_(Nucleus_basalis_(NB))-|Entopeduncular / BrainAtlas - Mouse McCarroll V32

MYH7B SCN7A SCN9A PIWIL2

1.25e-0511356434ae3dec5ec7585d155ea61de6adc42aa4f45226
ToppCellSmart-seq2-tissue-resident_(Smart-seq2)-myeloid-myeloid_monocytic-monocyte|tissue-resident_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

PALD1 TENM4 VASH1 C3

1.86e-05125564a72891c3fb9cdefa9254f8e2e3c4ffa6fc3a5ffc
ToppCellFrontal_cortex-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Syt6-Excitatory_Neuron.Slc17a7.Syt6-Slc24a2_(Deep_layer_pyramidal_cells)-|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

PTPN7 TTC21A MYO15A

2.33e-0544563405ac4aeee539322cfe661c7531248f81271be8d
ToppCellFrontal_cortex-Neuronal-Excitatory-eN2(Slc17a7_Slc17a6)-Syt6-Excitatory_Neuron.Slc17a7.Syt6-Slc24a2_(Deep_layer_pyramidal_cells)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

PTPN7 TTC21A MYO15A

2.33e-0544563a2c99e8ca635590a1f167b68bc390e2aa01e26be
ToppCellsevere_COVID-19-cDC|World / disease group, cell group and cell class (v2)

HOXA6 HTR7 SPINT1 SCN9A

4.44e-051565640a7e18ed8e13261c405eb6b9a183e99d8e1aac37
ToppCellSmart-seq2-tissue-resident_(Smart-seq2)-myeloid-myeloid_macrophage-microglial_cell|tissue-resident_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

PALD1 HOXC6 HTR7 C3

4.55e-05157564d4908cafd8870c1c225817f589ea2bce116ac7ab
ToppCellsevere_COVID-19-cDC|severe_COVID-19 / disease group, cell group and cell class (v2)

HOXA6 PALD1 HTR7 SCN9A

4.55e-05157564ec1978e07e2214048d015d8bb793c1d9991f6e37
ToppCellmild_COVID-19_(asymptomatic)-pDC|World / disease group, cell group and cell class (v2)

PALD1 TENM4 SCN9A TMEM151A

5.79e-05167564bf08f17965a4dd03f371b4ed0ab0d5e62ed61307
ToppCellmild_COVID-19_(asymptomatic)-pDC|mild_COVID-19_(asymptomatic) / disease group, cell group and cell class (v2)

PALD1 TENM4 SCN9A TMEM151A

5.92e-05168564968405ea56f7d001ef83ff9274610923c3b2d55d
ToppCell10x_3'_v2v3-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_pro-infl_II-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

PALD1 CSF2RA VASH1 C3

6.06e-051695640867528101767fc65e93b3561480bf830c50368d
ToppCelldroplet-Spleen-nan-18m-Myeloid-macrophage|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CSF2RA HTR7 SPINT1 PROCR

6.34e-051715644a2e6ea9674bf23e8012ef0bb2bf19ce1f55fcd5
ToppCellcontrol-Myeloid-Monocyte-derived_Macrophage|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

PALD1 PTPN7 CSF2RA VASH1

6.34e-05171564e828b684744a4fdf6b63ec033c4f000b39ca0d51
ToppCelldroplet-Spleen-nan-3m-Myeloid-macrophage|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CSF2RA HTR7 SPINT1 PROCR

6.34e-051715645b74df72e36ad04dfb25c72f1ca8efe043f6cda6
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Monocytic-Monocyte-derived_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PALD1 CSF2RA HTR7 FGF17

6.49e-0517256472fbfa890995e47048b47199c170cc7dcd7661f8
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Monocytic|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PALD1 CSF2RA HTR7 FGF17

6.49e-051725642ca6f0d1181aabe0d0e3e8f2e193f08dbda42dea
ToppCellGlobus_pallidus-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

HTR7 CAMTA1 CDH12 EBF4

6.63e-051735647e3897868dd3f6e4974f593c60649a543ffc8693
ToppCell5'-Adult-LargeIntestine-Epithelial-neuro-epithelial-L_cells_(PYY+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXB8 NKX2-2 TMEM151A CDH12

6.63e-051735649a3500b06d00d1d4ee42910a3a73327b21beab52
ToppCellNS-control-d_0-4-Myeloid-Monocyte-derived_Macrophage|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

PALD1 PTPN7 CSF2RA VASH1

6.78e-05174564758984730cd1c3ccf6866a3a8f03d6e002f3edb6
ToppCell3'-GW_trimst-1-SmallIntestine-Mesenchymal-mesothelial_cell-Mesothelium_(RGS5+)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PROCR TMEM151A MYO15A SLC14A2

6.94e-05175564f5451c29c487b998778e50349b3d774d5e20fd28
ToppCellCOVID-19-Myeloid-MoAM4|COVID-19 / Condition, Lineage and Cell class

PALD1 CSF2RA PROCR C3

7.25e-05177564ca5d0c3d5c700bbe4c2da068eb02be6229afb9a0
ToppCell5'-Adult-Appendix-Hematopoietic-Myeloid-cDC1|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PALD1 TENM4 CSF2RA VASH1

7.25e-05177564345cebc19f93970a9a46be139208b300081f5493
ToppCellPSB-critical-LOC-Myeloid-Basophil|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

HOXA6 PTPN7 PROCR SCN7A

7.41e-0517856445bdbb96094c97756e1b6eebd80eadd8472143f2
ToppCell10x5'-GI_large-bowel-Myeloid_Dendritic|GI_large-bowel / Manually curated celltypes from each tissue

HOXA6 PALD1 CSF2RA HTR7

7.74e-05180564400f48aa2851d89bf3b60d721bc0f635f3ad86eb
ToppCell10x5'-GI_large-bowel-Myeloid_Dendritic-DC2|GI_large-bowel / Manually curated celltypes from each tissue

HOXA6 PALD1 CSF2RA HTR7

7.74e-05180564d4ebe67a2735e244c08b238320bbb441ca88ee6f
ToppCellSevere-Myeloid-mDC|Severe / Condition, Lineage, Cell class and cell subclass

PALD1 CSF2RA HTR7 EBF4

7.90e-0518156400f2949b609ac21bd2da6fd8f685739eeb2f48ad
ToppCellSevere-Myeloid-mDC-|Severe / Condition, Lineage, Cell class and cell subclass

PALD1 CSF2RA HTR7 EBF4

7.90e-0518156451ded98c76ec35ab1d24ac3ab98280381daa9831
ToppCelltumor_Lung-Myeloid_cells-CD207+CD1a+_LCs|tumor_Lung / Location, Cell class and cell subclass

PALD1 CSF2RA CFAP97D1 SCN9A

8.07e-05182564243779ba1009097f8fafa1a691e296ec3aeefc04
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-3m-Mesenchymal-ependymal_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TTC21A SCN7A CCDC81 SLC14A2

8.07e-05182564587636c0f127231de21acd8aa632b74ff22ca8c2
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-3m-Mesenchymal-Ependyma|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TTC21A SCN7A CCDC81 SLC14A2

8.07e-05182564adfadd7893e74b3002f13f00875e3667d3493e0c
ToppCellCOVID-19-APC-like-Dendritic_cells|COVID-19 / group, cell type (main and fine annotations)

PALD1 CSF2RA HTR7 VASH1

8.25e-05183564703364836b42aa6ac6c68b42b700ac23c4a1afc7
ToppCellDendritic_Cells-SSc-ILD_01|World / lung cells shred on cell class, cell subclass, sample id

PALD1 PTPN7 CSF2RA VASH1

8.25e-05183564dd09e39e8ca282ff0f470e0652d519e190badd0b
ToppCellControl-APC-like-Dendritic_cells|Control / group, cell type (main and fine annotations)

PALD1 TENM4 CSF2RA VASH1

8.25e-051835648f9c8e2436f18ea7c265b08e4e149e19cb513a16
ToppCellControl-APC-like|Control / group, cell type (main and fine annotations)

PALD1 TENM4 CSF2RA VASH1

8.25e-05183564c313ac72cc9fa1583456d452393f61f0a4ca33a8
ToppCell3'_v3-bone_marrow-Myeloid_Dendritic-DC2|bone_marrow / Manually curated celltypes from each tissue

TENM4 CSF2RA HTR7 SPINT1

8.25e-05183564f482e4fe011fa450a475034b1e25587233855bdb
ToppCellCOVID-19-APC-like|COVID-19 / group, cell type (main and fine annotations)

PALD1 CSF2RA HTR7 VASH1

8.25e-05183564b8f5afaf9ff1b2b1bc60be58654d1b23859dafa9
ToppCellCOPD-Myeloid-cDC1|World / Disease state, Lineage and Cell class

PALD1 CSF2RA NLRC5 EBF4

8.42e-0518456442d7ce104cd7bcb83fbbbd0e7d3267ad07edfa94
ToppCellBAL-Control-Myeloid-cDC-cDC-cDC_2|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

PALD1 PTPN7 CSF2RA EBF4

8.42e-051845640a26bcc6610f756939e32a4d6dfeebcbf3a1db86
ToppCelltumor_Lymph_Node_/_Brain-Myeloid_cells-CD163+CD14+_DCs|tumor_Lymph_Node_/_Brain / Location, Cell class and cell subclass

PALD1 CSF2RA HTR7 VASH1

8.42e-051845642dc4b2a9970111ed5e2977fc178595a12d7bb59d
ToppCellBAL-Control-Myeloid-cDC-cDC-cDC_2|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PALD1 PTPN7 CSF2RA EBF4

8.60e-05185564fec16a5e527fdef32d25957451b6e8ee9796cafd
ToppCellControl-Myeloid-cDC1|Control / Disease state, Lineage and Cell class

PALD1 TENM4 CSF2RA EBF4

8.78e-05186564b05c394aa3573ba855abc3066739ca193883b0c3
ToppCell3'_v3-blood-Myeloid_Dendritic-DC2|blood / Manually curated celltypes from each tissue

PALD1 TENM4 CSF2RA SCN9A

8.96e-051875649f3db9f0e5de34aeabfe5984f675bc7a65435df7
ToppCellnucseq-Immune-Immune_Myeloid-Myeloid_Dendritic-cDC1|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

PALD1 TENM4 CSF2RA NLRC5

9.15e-05188564d5ce3ffe783c322b4765b790e861727e46bc34b3
ToppCellMonocytes-Tissue-resident_macrophages|World / Immune cells in Kidney/Urine in Lupus Nephritis

PALD1 CSF2RA VASH1 C3

9.53e-0519056407215e8f292cb54c670037aaf28393cddbe5548c
ToppCellPBMC-Control-Myeloid-cDC-cDC-cDC_6|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

TENM4 CSF2RA HTR7 SPINT1

9.73e-051915646cda82a994f4b205cf54590c979d7c9f3be2b4c8
ToppCellPBMC-Control-Myeloid-cDC-cDC-cDC_6|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

TENM4 CSF2RA HTR7 SPINT1

9.73e-051915644257f02856f3510981e9f84d465d91448d6126e2
ToppCellCOVID-19-Myeloid-DC2|COVID-19 / Condition, Lineage and Cell class

PALD1 CSF2RA SPINT1 VASH1

9.73e-051915641304ab7b5713f29f3966ffc020ea1b52e8e2f375
ToppCellfacs-Skin|facs / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TENM4 PLEC CAMTA1 ABLIM3

9.73e-05191564ae524103331fa53fa82888dbb567fc36abcee7e0
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_pro-infl_I-D|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

CSF2RA HTR7 PROCR C3

9.73e-051915647d00796459f4ff0ab7f06a8379b2d34e76b078b2
ToppCellCOPD-Myeloid-cDC1|Myeloid / Disease state, Lineage and Cell class

PALD1 CSF2RA NLRC5 EBF4

9.73e-051915643480e6d27dd4291765bbbb2acdb6a2e4f02c8085
ToppCellGlobus_pallidus-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Slc17a6-Excitatory_Neuron.Slc17a6.Rspo3_(Substantia_Innominata_(SI))|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

CFAP97D1 MYO15A FGF17

9.83e-0571563879551882097cfaa4eccf11cb07f3bae68c777c3
ToppCellGlobus_pallidus-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Slc17a6-Excitatory_Neuron.Slc17a6.Rspo3_(Substantia_Innominata_(SI))-|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

CFAP97D1 MYO15A FGF17

9.83e-05715638557be86709925cf19125e44c909133fd5adcb62
ToppCell5'-Adult-SmallIntestine-Hematopoietic-Myeloid-cDC2|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PALD1 TENM4 CSF2RA HTR7

9.92e-0519256490274b85f3d612b6a6d435860cd6d049ddeb1d96
ToppCell3'-Parenchyma_lung-Endothelial-Lymphatic_EC-endothelial_cell_of_lymphatic_vessel-Lymphatic_EC_mature-Lymphatic_EC_mature_L.2.5.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PALD1 PROCR SCN9A ABLIM3

9.92e-0519256435ffe7aa9ffab85eac3326651e901c39d0119650
ToppCell11.5-Distal|11.5 / Age, Tissue, Lineage and Cell class

HOXB8 HOXC6 HOXC9 PROCR

9.92e-05192564169b9ee2377beb9e4ad35bc82bb7a3dafe8f05b6
ToppCellMonocytes-Tissue-resident_macrophages|Monocytes / Immune cells in Kidney/Urine in Lupus Nephritis

PALD1 CSF2RA VASH1 C3

1.01e-04193564198552810dcac8d0ca63a78badd6702b49ff6edf
ToppCellMNPs-Dendritic_Cells|MNPs / lung cells shred on cell class, cell subclass, sample id

PALD1 PTPN7 CSF2RA C3

1.01e-041935640e6b8e179bfe1c6e93137c76c76a91c7782a4989
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Monocytic-Monocyte-derived_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PALD1 CSF2RA HTR7 C3

1.01e-041935643e3d7cb3e7242ec9c9677e07e303835649852b52
ToppCell3'-Parenchyma_lung-Endothelial-Lymphatic_EC-endothelial_cell_of_lymphatic_vessel|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PALD1 PROCR SCN9A ABLIM3

1.01e-04193564040f6bb42aa41d0921371fdda1cc0912c4fe1930
ToppCell3'-Parenchyma_lung-Endothelial-Lymphatic_EC|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PALD1 PROCR SCN9A ABLIM3

1.01e-04193564e468287c8b30c56d1de65e8347ade233ba6cf584
ToppCellfacs-Trachea-3m-Epithelial-glandular_epithelial-lung_secretory_cell-mucous|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TENM4 SPINT1 NKX2-2 SLC14A2

1.01e-04193564c5925b3b5d19098e3987789d68a493d7fd548ac9
ToppCellfacs-Trachea-3m-Epithelial-glandular_epithelial|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TENM4 SPINT1 NKX2-2 SLC14A2

1.01e-041935646905de261d90dfe3dd2c2cf5b2e26afb2bcc3d5b
ToppCellfacs-Trachea-3m-Epithelial-glandular_epithelial-lung_secretory_cell|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TENM4 SPINT1 NKX2-2 SLC14A2

1.01e-04193564f73630725f093c646bdaf178c39505c04a16e2c6
ToppCellDendritic_Cells|World / lung cells shred on cell class, cell subclass, sample id

PALD1 PTPN7 CSF2RA VASH1

1.01e-041935647792eb6e247af2d7a8f80476f37dcd880922d625
ToppCell21-Trachea-Mesenchymal-Mesenchyme_RSPO2+|Trachea / Age, Tissue, Lineage and Cell class

HOXC6 HOXC9 SCN7A ABLIM3

1.03e-041945648fc98d2c9d94f3bc6292265e20ab71c4f1f37bb3
ToppCell10x5'-Liver-Myeloid_Dendritic|Liver / Manually curated celltypes from each tissue

PALD1 CSF2RA HTR7 SCN9A

1.03e-04194564e6391bc7073831847c469ef0b0c437118e1f151f
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Dendritic|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PALD1 CSF2RA HTR7 VASH1

1.03e-0419456459180fe75be386530f1be668a37e4ada2eb19ddc
ToppCellAdult-Immune-monocyte-D231|Adult / Lineage, Cell type, age group and donor

ANKRD13D PALD1 CSF2RA VASH1

1.05e-04195564ea24da6fea1487acb1e56c28c0649858cc0a12bd
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Dendritic-CD1c-positive_myeloid_dendritic_cell-DC2_(CD1c+_dendritic_cell)-DC2_L.1.2.1.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PALD1 CSF2RA HTR7 VASH1

1.05e-04195564c26c62522b6e0599f6a1256fefe26e1ed9badcc2
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Dendritic-CD1c-positive_myeloid_dendritic_cell|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PALD1 CSF2RA HTR7 VASH1

1.05e-0419556460ba7be0c333ddc57885263a1103faffe06051c7
ToppCellBAL-Mild-Myeloid-cDC-cDC|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PALD1 CSF2RA HTR7 EBF4

1.05e-0419556466e5fd9f3208a06d617c5e994822bf57dceae7e2
ToppCellBAL-Mild-Myeloid-cDC|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PALD1 CSF2RA HTR7 EBF4

1.05e-041955649e5cf33b5dd455efa464a63d7116786c0786aefd
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Dendritic-CD1c-positive_myeloid_dendritic_cell-DC2_(CD1c+_dendritic_cell)|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PALD1 CSF2RA HTR7 VASH1

1.05e-04195564d67950679ccb508016352e9cb4c675bd09eaac5b
ToppCellAdult-Immune-monocyte|Adult / Lineage, Cell type, age group and donor

ANKRD13D CSF2RA HTR7 VASH1

1.07e-041965643ef193c5180de3137daf886492e74fc574bc9767
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Monocytic|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PALD1 CSF2RA HTR7 VASH1

1.07e-04196564291c59b609985167c98a40d4e2caeea2fad74941
ToppCell(7)_Epithelial-I_(AT1)|World / Lung cell shreds - cell class (v4) and cell subclass (v4)

MYO1C SPINT1 MYH7B PKDCC

1.07e-04196564150554fa06868d29b0608189862eef6505ba757f
ToppCellTransplant_Alveoli_and_parenchyma-Immune-Dendritic_cells|Transplant_Alveoli_and_parenchyma / Tissue, Lineage and Cell class of Lung Cells from 10X

PALD1 PTPN7 CSF2RA VASH1

1.07e-04196564f278b144b8deaee0bf41682081b9fbb0b1e82b19
ToppCellBronchial-NucSeq-Stromal-Peri/Epineurial_-NAF_endoneurial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

TENM4 SCN7A VASH1 ABLIM3

1.10e-041975646806ec223e542f0475303698eb78c1cc527f5c6b
ToppCellParenchymal-NucSeq-Immune_Myeloid-Dendritic_cell-DC_2|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

PALD1 CSF2RA HTR7 VASH1

1.10e-04197564363ae03310f63a586ba3cea2a59f35d5a335a54e
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Immune-Myeloid-Monocytic-Monocyte-derived_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

PALD1 CSF2RA HTR7 VASH1

1.10e-04197564dea1d29154c585ab588e50b83c7c8de7fe24d2d4
ToppCellMonocytes-cDCs|World / Immune cells in Kidney/Urine in Lupus Nephritis

PALD1 CSF2RA SPINT1 VASH1

1.10e-041975643388c104af4c6a05988e102627e0c5e34d9dcc45
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Immune-Myeloid-Monocytic-Monocyte-derived_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PALD1 CSF2RA HTR7 VASH1

1.10e-0419756457dafb3047745a44b2345b8036e159c3641d496e
Diseaseprotein C measurement, hematological measurement

MYH7B PROCR

9.85e-063542EFO_0004503, EFO_0004633
DiseaseObsessive-Compulsive Disorder

HOXB8 HTR1D

4.91e-056542C0028768
Diseasegeneralized epilepsy with febrile seizures plus 2 (implicated_via_orthology)

SCN7A SCN9A

1.47e-0410542DOID:0111294 (implicated_via_orthology)
DiseaseDravet syndrome (implicated_via_orthology)

SCN7A SCN9A

1.47e-0410542DOID:0080422 (implicated_via_orthology)
Diseasegeneralized epilepsy with febrile seizures plus (implicated_via_orthology)

SCN7A SCN9A

2.14e-0412542DOID:0060170 (implicated_via_orthology)
Diseaseprotein C measurement

MYH7B PROCR

4.39e-0417542EFO_0004633
Diseaseanxiety disorder (implicated_via_orthology)

HTR7 SCN9A

7.42e-0422542DOID:2030 (implicated_via_orthology)
DiseaseKallmann Syndrome

FGF8 FGF17

1.04e-0326542C0162809
Diseasetrait in response to apixaban

TENM4 C3 ABLIM3

1.24e-03115543OBA_2050328
Diseasechronic obstructive pulmonary disease

HOXC6 TENM4 KANSL1 PROCR ABLIM3 SLC14A2

1.57e-03688546EFO_0000341
Diseasevital capacity

HOXC6 KANSL1 MYO1C MYH7B PKDCC PIWIL2 ABLIM3 SLC14A2

1.74e-031236548EFO_0004312

Protein segments in the cluster

PeptideGeneStartEntry
QQLNAYNRTRYELRE

PROCR

166

Q9UNN8
YSQDIYENLDLRQRR

ABLIM3

356

O94929
TARLRRLVTAYQRSY

CHD8

1746

Q9HCK8
QQSRRAAVLIQKYYR

CAMTA1

1591

Q9Y6Y1
LVLQYRDYQRATQRL

ANKRD13D

91

Q6ZTN6
QYRSLLVERNRSQRY

CCDC96

231

Q2M329
LVERNRSQRYNLYLQ

CCDC96

236

Q2M329
RAAVLIQQHYRSYRR

CAMTA2

1126

O94983
RNEQVEIRAVLYNYR

C3

841

P01024
TARRSLLRYFYRQLL

ADAD1

276

Q96M93
QLSRRQIREYQLYSR

FGF17

46

O60258
YNINDRQEELRVYLR

RIC1

556

Q4ADV7
YTVRQLTIQYQEERR

PTPN7

231

P35236
QTERENLRIALRYYN

HLA-H

96

P01893
RLQLRSLQYLERYVC

PALD1

766

Q9ULE6
YLTRDRRYEVARVLN

HOXC9

216

P31274
RRGRQTYTRYQTLEL

HOXA6

156

P31267
ARGYLARQRYQQMRR

MYO15A

1936

Q9UKN7
QVVLYSIRNQLRYRN

FAM91A1

36

Q658Y4
RLLYTDFRQRYRILN

MYH7B

761

A7E2Y1
VRRNAVLAIYTIYRN

COPB1

151

P53618
SNDTYLYRVQRLIRS

CSTL1

56

Q9H114
YRIRQQTDIYKQIRA

KANSL1

461

Q7Z3B3
RYCRLLNAVRIIQVY

IQCF5

86

A8MTL0
KYLQLLRTSAQQRYR

NLRC5

146

Q86WI3
RRRGRQTYSRYQTLE

HOXB8

146

P17481
RRRGRQIYSRYQTLE

HOXC6

141

P09630
VTAVIRSRRYYREQR

OFCC1

216

Q8IZS5
TDQLSRRLIRTYQLY

FGF8

61

P55075
LRSFRELTYQYRQNI

CHFR

606

Q96EP1
QRAQRNSLLYYSEER

CCDC81

331

Q6ZN84
YRLRLVYNNGLRTEQ

EBF4

111

Q9BQW3
LYGRIYRAARNRILN

HTR1D

216

P28221
QNSRRYIRNTTRYLL

CFAP97D1

146

B2RV13
RYRLQRREDYTRYNQ

IMP3

36

Q9NV31
RREDYTRYNQLSRAV

IMP3

41

Q9NV31
ETRRNGYSRRQQELY

CDH12

551

P55289
RNYARRQKHLQRYSL

S100PBP

371

Q96BU1
RDVQYFLYIRNSKRR

CSF2RA

146

P15509
LQQQYELYRERLLQR

PARP10

861

Q53GL7
QLRREGIRYARIQLY

RSBN1L

646

Q6PCB5
LARQIRARYEEVQRY

PKDCC

56

Q504Y2
NIVITRYNNRTYRID

PIWIL2

416

Q8TC59
VSATVIQRAYRRYRL

SCN9A

1891

Q15858
YELERRFRQQRYLSA

NKX2-2

141

O95096
YHYVRRTRQITRYRN

TMEM151A

156

Q8N4L1
LRTTYRSLLQCQYRN

HTR7

391

P34969
YLLRRQIRTVIQYQT

CTDNEP1

26

O95476
SSYVARQYRSLRVRI

RINL

271

Q6ZS11
ESAYYLRSRQRRQPR

TOR1AIP1

101

Q5JTV8
RRHYLERRNYIIQNI

TSPYL1

261

Q9H0U9
LTREVYRSYRQLRTQ

SPINT1

141

O43278
LNGRTRRYTDIQLQY

TENM4

2656

Q6N022
QRELEQLGRQLRYYR

PLEC

1336

Q15149
ANIYLQTLRDRRLYI

TTC21A

701

Q8NDW8
IIQRAYKNYRLRRND

SCN7A

1631

Q01118
RLEAVQRYIRELQYN

VASH1

121

Q7L8A9
RIYYLSQERNRRASI

SLC14A2

896

Q15849
NLRRRFRENLIYTYI

MYO1C

66

O00159