Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionpeptidyl-prolyl cis-trans isomerase activity

RGPD4 RANBP2 RGPD3 FKBP5

5.02e-0550814GO:0003755
GeneOntologyMolecularFunctioncis-trans isomerase activity

RGPD4 RANBP2 RGPD3 FKBP5

6.33e-0553814GO:0016859
GeneOntologyMolecularFunctionSUMO ligase activity

RGPD4 RANBP2 RGPD3

6.97e-0520813GO:0061665
GeneOntologyMolecularFunctionSUMO transferase activity

RGPD4 RANBP2 RGPD3

4.17e-0436813GO:0019789
GeneOntologyBiologicalProcesspositive regulation of glucokinase activity

RGPD4 RANBP2 RGPD3

4.64e-069803GO:0033133
GeneOntologyBiologicalProcessprotein folding

PDIA4 RGPD4 RANBP2 CLGN RGPD3 PDCL FKBP5 SIL1

5.05e-06246808GO:0006457
GeneOntologyBiologicalProcesspositive regulation of hexokinase activity

RGPD4 RANBP2 RGPD3

6.61e-0610803GO:1903301
GeneOntologyBiologicalProcessprotein peptidyl-prolyl isomerization

RGPD4 RANBP2 RGPD3 FKBP5

1.40e-0538804GO:0000413
GeneOntologyBiologicalProcessregulation of glucokinase activity

RGPD4 RANBP2 RGPD3

1.56e-0513803GO:0033131
GeneOntologyBiologicalProcessregulation of hexokinase activity

RGPD4 RANBP2 RGPD3

1.98e-0514803GO:1903299
GeneOntologyBiologicalProcesspeptidyl-proline modification

RGPD4 RANBP2 RGPD3 FKBP5

5.73e-0554804GO:0018208
GeneOntologyBiologicalProcessNLS-bearing protein import into nucleus

RGPD4 RANBP2 RGPD3

6.11e-0520803GO:0006607
GeneOntologyBiologicalProcessnuclear export

RGPD4 RANBP2 MDN1 EIF4ENIF1 MCM3AP RGPD3

8.32e-05185806GO:0051168
GeneOntologyBiologicalProcessRNA localization

RGPD4 RANBP2 MCM3AP RGPD3 HNRNPAB BICD1

1.99e-04217806GO:0006403
GeneOntologyCellularComponentnuclear pore nuclear basket

RGPD4 RANBP2 MCM3AP RGPD3

6.14e-0718814GO:0044615
GeneOntologyCellularComponentcytoplasmic periphery of the nuclear pore complex

RGPD4 RANBP2 RGPD3

3.10e-068813GO:1990723
GeneOntologyCellularComponentnuclear pore cytoplasmic filaments

RGPD4 RANBP2 RGPD3

6.60e-0610813GO:0044614
GeneOntologyCellularComponentannulate lamellae

RGPD4 RANBP2 RGPD3

1.98e-0514813GO:0005642
GeneOntologyCellularComponentnuclear inclusion body

RGPD4 RANBP2 RGPD3

6.09e-0520813GO:0042405
GeneOntologyCellularComponentnuclear membrane

AKAP6 RGPD4 RANBP2 RRP12 MCM3AP RGPD3 NAV3 ITPR1

6.21e-05349818GO:0031965
GeneOntologyCellularComponentSUMO ligase complex

RGPD4 RANBP2 RGPD3

7.09e-0521813GO:0106068
GeneOntologyCellularComponentcalpain complex

CAPNS1 CAPNS2

8.85e-054812GO:0110158
GeneOntologyCellularComponentnuclear envelope

AKAP6 RGPD4 GMCL1 RANBP2 RRP12 MCM3AP RGPD3 NAV3 ITPR1

3.13e-04560819GO:0005635
GeneOntologyCellularComponentnuclear pore

RGPD4 RANBP2 MCM3AP RGPD3

6.42e-04101814GO:0005643
GeneOntologyCellularComponentcaspase complex

CAPNS1 CAPNS2

6.54e-0410812GO:0008303
GeneOntologyCellularComponentsmooth endoplasmic reticulum

PDIA4 RYR3 ITPR1

7.55e-0446813GO:0005790
GeneOntologyCellularComponentperinuclear region of cytoplasm

AKAP6 RGPD4 RANBP2 MAP1B RGPD3 PRKCD ADGRV1 SLC39A13 RYR3 BICD1 ITPR1

9.26e-049348111GO:0048471
MousePhenofailure of blastocyst formation

RGPD4 RANBP2 RGPD3 ZNF407 AATF

3.61e-0731685MP:0012129
MousePhenoabnormal blastocyst formation

RGPD4 RANBP2 RGPD3 ZNF407 AATF

1.19e-0639685MP:0012128
MousePhenoabnormal blastocyst hatching

RGPD4 RANBP2 RGPD3 ZNF407 AATF SALL4

1.78e-05113686MP:0003693
MousePhenoembryonic lethality before implantation, complete penetrance

RGPD4 CASP8AP2 RANBP2 RGPD3 ZNF407 AATF SALL4

5.63e-05203687MP:0011094
MousePhenoelevated level of mitotic sister chromatid exchange

RGPD4 RANBP2 RGPD3

5.89e-0516683MP:0003701
MousePhenoembryonic lethality before implantation

RGPD4 CASP8AP2 RANBP2 RGPD3 ZNF407 AATF SALL4

1.69e-04242687MP:0006204
MousePhenofailure of blastocyst to hatch from the zona pellucida

RGPD4 RANBP2 RGPD3 ZNF407 AATF

1.70e-04107685MP:0003694
MousePhenoabnormal preimplantation embryo development

RGPD4 RANBP2 RGPD3 ZNF407 AATF SALL4

1.79e-04171686MP:0009781
MousePhenoaneuploidy

RGPD4 RANBP2 RGPD3 TP53BP1

2.17e-0461684MP:0004024
MousePhenoabnormal morula morphology

RGPD4 RANBP2 RGPD3

2.64e-0426683MP:0012058
MousePhenoabnormal cell nucleus morphology

RGPD4 GMCL1 RANBP2 RGPD3 TP53BP1 RAD54L

2.67e-04184686MP:0003111
MousePhenoabnormal rod electrophysiology

RGPD4 RANBP2 RGPD3 NCAM1 SLC24A1

2.79e-04119685MP:0004021
MousePhenoabnormal chromosome morphology

RGPD4 RANBP2 RGPD3 TP53BP1 RAD54L

3.64e-04126685MP:0003702
MousePhenoabnormal double-strand DNA break repair

SETX TET1 BRME1 TP53BP1

3.69e-0470684MP:0010948
MousePhenodecreased tumor latency

RGPD4 RANBP2 RGPD3

4.07e-0430683MP:0010308
DomainGCC2_Rab_bind

RGPD4 GCC2 RGPD3

2.72e-067813IPR032023
DomainRab_bind

RGPD4 GCC2 RGPD3

2.72e-067813PF16704
Domain-

RGPD4 GCC2 RGPD3

9.23e-06108131.10.220.60
DomainGrip

RGPD4 GCC2 RGPD3

1.26e-0511813SM00755
DomainGRIP

RGPD4 GCC2 RGPD3

1.26e-0511813PF01465
DomainRan_BP1

RGPD4 RANBP2 RGPD3

1.68e-0512813PF00638
DomainGRIP_dom

RGPD4 GCC2 RGPD3

1.68e-0512813IPR000237
DomainGRIP

RGPD4 GCC2 RGPD3

1.68e-0512813PS50913
DomainRANBD1

RGPD4 RANBP2 RGPD3

1.68e-0512813PS50196
DomainRanBD

RGPD4 RANBP2 RGPD3

2.18e-0513813SM00160
DomainRan_bind_dom

RGPD4 RANBP2 RGPD3

2.18e-0513813IPR000156
DomainTPR

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

2.45e-04129815SM00028
DomainRIH_assoc

RYR3 ITPR1

2.76e-046812PF08454
DomainRIH_assoc-dom

RYR3 ITPR1

2.76e-046812IPR013662
Domain-

DSP MACF1

2.76e-0468123.90.1290.10
DomainRIH_dom

RYR3 ITPR1

2.76e-046812IPR000699
DomainIns145_P3_rcpt

RYR3 ITPR1

2.76e-046812IPR014821
DomainRyanodine_recept-rel

RYR3 ITPR1

2.76e-046812IPR015925
Domain-

RYR3 ITPR1

2.76e-0468121.25.10.30
DomainRYDR_ITPR

RYR3 ITPR1

2.76e-046812PF01365
DomainIns145_P3_rec

RYR3 ITPR1

2.76e-046812PF08709
DomainTPR_repeat

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

2.82e-04133815IPR019734
DomainSpectrin/alpha-actinin

AKAP6 DSP MACF1

3.56e-0432813IPR018159
DomainSPEC

AKAP6 DSP MACF1

3.56e-0432813SM00150
DomainPlectin_repeat

DSP MACF1

3.85e-047812IPR001101
DomainPlectin

DSP MACF1

3.85e-047812PF00681
DomainPLEC

DSP MACF1

3.85e-047812SM00250
DomainEF-hand_8

CAPNS1 CAPNS2 TNNC2

4.27e-0434813PF13833
DomainTPR-contain_dom

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

4.90e-04150815IPR013026
DomainEF-hand_1

CAPNS1 CAPNS2 MACF1 TNNC2 RYR3

5.21e-04152815PF00036
DomainARM-type_fold

USP34 RRP12 EIF2B5 USP9Y SIL1 RYR3 ITPR1

6.71e-04339817IPR016024
DomainTPR_REGION

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

7.55e-04165815PS50293
DomainTPR

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

7.55e-04165815PS50005
DomainMIR

RYR3 ITPR1

8.17e-0410812PS50919
DomainMIR

RYR3 ITPR1

8.17e-0410812PF02815
DomainMIR

RYR3 ITPR1

8.17e-0410812SM00472
DomainMIR_motif

RYR3 ITPR1

8.17e-0410812IPR016093
Domain-

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

2.06e-032078151.25.40.10
DomainEF_HAND_2

CAPNS1 CAPNS2 MACF1 TNNC2 RYR3

3.31e-03231815PS50222
DomainEF_hand_dom

CAPNS1 CAPNS2 MACF1 TNNC2 RYR3

3.37e-03232815IPR002048
DomainTPR-like_helical_dom

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

3.44e-03233815IPR011990
Domain-

CAPNS1 CAPNS2 MACF1 TNNC2 RYR3

5.54e-032618151.10.238.10
DomainSpectrin_repeat

DSP MACF1

6.99e-0329812IPR002017
PathwayBIOCARTA_RANBP2_PATHWAY

RGPD4 RANBP2 RGPD3

4.64e-0518563MM1549
PathwayREACTOME_NUCLEAR_ENVELOPE_BREAKDOWN

RGPD4 RANBP2 RGPD3 LPIN2

6.55e-0555564MM14917
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

PDIA4 RGPD4 SRRM1 RANBP2 ILF3 MDN1 ZBED4 MAP1B RAPH1 DSP RGPD3 LARP1 MACF1 AATF BOD1L1 CHD6 GPR101 LRRC43 SPAG17 HNRNPAB LUZP1

1.02e-111442812135575683
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

RGPD4 USP34 CASP8AP2 RANBP2 EIF4ENIF1 RAPH1 DSP GCC2 RGPD3 TET1 CHD6 RREB1 LUZP1

1.63e-11418811334709266
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

SRRM1 RANBP2 ILF3 MDN1 RAPH1 DSP RRP12 EIF2B5 LARP1 PRKCD RREB1 KDM6A FKBP5 TP53BP1

2.99e-09774811415302935
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

PDIA4 USP34 SRRM1 RANBP2 MDN1 MAP1B DSP RRP12 MCM3AP LARP1 MACF1 AATF TP53BP1

3.73e-09653811322586326
Pubmed

An Rtn4/Nogo-A-interacting micropeptide modulates synaptic plasticity with age.

RGPD4 RANBP2 RGPD3 NCAM1

8.90e-091181435771867
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

AKAP6 PDIA4 USP34 ANO9 DCDC2 SETX SLC20A1 TET1 MACF1 PRKCD AATF SALL4 BOD1L1 TP53BP1 ITPR1

2.75e-081084811511544199
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

FRMPD4 ZBED4 GCC2 RRP12 MCM3AP NAV3 GON4L MACF1 BOD1L1 CHD6

3.87e-08407811012693553
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

SRRM1 CASP8AP2 RANBP2 SETX ILF3 MDN1 ZBED4 DSP RRP12 RGPD3 ING5 AATF CHD6 RREB1 KDM6A HNRNPAB

4.23e-081294811630804502
Pubmed

An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.

PDIA4 USP34 CLGN EIF4ENIF1 SLC20A1 VPS13C LARP1 BOD1L1 CHD6 RREB1 FKBP5 MXRA7

1.32e-07733811234672954
Pubmed

E3 ubiquitin ligase RNF123 targets lamin B1 and lamin-binding proteins.

SETX MDN1 ZBED4 DSP CSNK1G2 VPS13C MCM3AP BRME1 LARP1 BOD1L1 CHD6 CFAP44

1.37e-07736811229676528
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

SRRM1 RANBP2 SETX ILF3 MAP1B DSP LARP1 AATF BOD1L1 RREB1 HNRNPAB TP53BP1 LUZP1

3.08e-07954811336373674
Pubmed

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

SRRM1 RANBP2 MDN1 MAP1B RRP12 GON4L AATF HNRNPAB TP53BP1

3.57e-0739481927248496
Pubmed

Nup358, a nucleoporin, functions as a key determinant of the nuclear pore complex structure remodeling during skeletal myogenesis.

RGPD4 RANBP2 RGPD3

4.23e-07781321205196
Pubmed

Haploinsufficiency of RanBP2 is neuroprotective against light-elicited and age-dependent degeneration of photoreceptor neurons.

RGPD4 RANBP2 RGPD3

4.23e-07781318949001
Pubmed

Selective impairment of a subset of Ran-GTP-binding domains of ran-binding protein 2 (Ranbp2) suffices to recapitulate the degeneration of the retinal pigment epithelium (RPE) triggered by Ranbp2 ablation.

RGPD4 RANBP2 RGPD3

4.23e-07781325187515
Pubmed

Interconversion of red opsin isoforms by the cyclophilin-related chaperone protein Ran-binding protein 2.

RGPD4 RANBP2 RGPD3

4.23e-0778139037092
Pubmed

Localization of the Ran-GTP binding protein RanBP2 at the cytoplasmic side of the nuclear pore complex.

RGPD4 RANBP2 RGPD3

4.23e-0778138603673
Pubmed

Uncoupling phototoxicity-elicited neural dysmorphology and death by insidious function and selective impairment of Ran-binding protein 2 (Ranbp2).

RGPD4 RANBP2 RGPD3

4.23e-07781326632511
Pubmed

Differential loss of prolyl isomerase or chaperone activity of Ran-binding protein 2 (Ranbp2) unveils distinct physiological roles of its cyclophilin domain in proteostasis.

RGPD4 RANBP2 RGPD3

4.23e-07781324403063
Pubmed

Distinct and atypical intrinsic and extrinsic cell death pathways between photoreceptor cell types upon specific ablation of Ranbp2 in cone photoreceptors.

RGPD4 RANBP2 RGPD3

4.23e-07781323818861
Pubmed

Genomic organization, expression, and localization of murine Ran-binding protein 2 (RanBP2) gene.

RGPD4 RANBP2 RGPD3

4.23e-07781311353387
Pubmed

Microglial activation in an amyotrophic lateral sclerosis-like model caused by Ranbp2 loss and nucleocytoplasmic transport impairment in retinal ganglion neurons.

RGPD4 RANBP2 RGPD3

4.23e-07781330944974
Pubmed

Nucleoporin Nup358 drives the differentiation of myeloid-biased multipotent progenitors by modulating HDAC3 nuclear translocation.

RGPD4 RANBP2 RGPD3

4.23e-07781338838144
Pubmed

Kinesin-1 and mitochondrial motility control by discrimination of structurally equivalent but distinct subdomains in Ran-GTP-binding domains of Ran-binding protein 2.

RGPD4 RANBP2 RGPD3

4.23e-07781323536549
Pubmed

Retina-specifically expressed novel subtypes of bovine cyclophilin.

RGPD4 RANBP2 RGPD3

4.23e-0778137559465
Pubmed

Mst1, RanBP2 and eIF4G are new markers for in vivo PI3K activation in murine and human prostate.

RGPD4 RANBP2 RGPD3

4.23e-07781317372272
Pubmed

Proteostatic Remodeling of Small Heat Shock Chaperones─Crystallins by Ran-Binding Protein 2─and the Peptidyl-Prolyl cis-trans Isomerase and Chaperone Activities of Its Cyclophilin Domain.

RGPD4 RANBP2 RGPD3

4.23e-07781338657106
Pubmed

Identification of RanBP2- and kinesin-mediated transport pathways with restricted neuronal and subcellular localization.

RGPD4 RANBP2 RGPD3

4.23e-07781312191015
Pubmed

Ranbp2 haploinsufficiency mediates distinct cellular and biochemical phenotypes in brain and retinal dopaminergic and glia cells elicited by the Parkinsonian neurotoxin, 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine (MPTP).

RGPD4 RANBP2 RGPD3

4.23e-07781322821000
Pubmed

Neuroprotection resulting from insufficiency of RANBP2 is associated with the modulation of protein and lipid homeostasis of functionally diverse but linked pathways in response to oxidative stress.

RGPD4 RANBP2 RGPD3

4.23e-07781320682751
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

RANBP2 SETX ILF3 MDN1 MAP1B DSP RRP12 MCM3AP EIF2B5 MACF1 PRKCD AATF HNRNPAB TP53BP1 LUZP1

4.78e-071353811529467282
Pubmed

The distribution of phosphorylated SR proteins and alternative splicing are regulated by RANBP2.

RGPD4 RANBP2 RGPD3

6.76e-07881322262462
Pubmed

The nucleoporin RanBP2 tethers the cAMP effector Epac1 and inhibits its catalytic activity.

RGPD4 RANBP2 RGPD3

6.76e-07881321670213
Pubmed

Zap70 and downstream RanBP2 are required for the exact timing of the meiotic cell cycle in oocytes.

RGPD4 RANBP2 RGPD3

6.76e-07881328745977
Pubmed

Critical role of RanBP2-mediated SUMOylation of Small Heterodimer Partner in maintaining bile acid homeostasis.

RGPD4 RANBP2 RGPD3

6.76e-07881327412403
Pubmed

Mice lacking Ran binding protein 1 are viable and show male infertility.

RGPD4 RANBP2 RGPD3

6.76e-07881321310149
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

SRRM1 SETX MDN1 MAP1B RAPH1 DSP TET1 LARP1 MACF1 BOD1L1 PDCL LUZP1

7.26e-07861811236931259
Pubmed

Interaction of Sox2 with RNA binding proteins in mouse embryonic stem cells.

RGPD4 RANBP2 ILF3 RGPD3 ING5 SALL4

7.82e-0713581631077711
Pubmed

Comparative proximity biotinylation implicates the small GTPase RAB18 in sterol mobilization and biosynthesis.

RANBP2 RAPH1 DSP VPS13C GCC2 RGPD3 LARP1 PDCL LUZP1 ITPR1

8.29e-07568811037774976
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

AKAP6 USP34 CASP8AP2 DCDC2 MACF1 CHD6 ADGRV1

1.00e-0622581712168954
Pubmed

Resolution of sister centromeres requires RanBP2-mediated SUMOylation of topoisomerase IIalpha.

RGPD4 RANBP2 RGPD3

1.01e-06981318394993
Pubmed

The docking of kinesins, KIF5B and KIF5C, to Ran-binding protein 2 (RanBP2) is mediated via a novel RanBP2 domain.

RGPD4 RANBP2 RGPD3

1.01e-06981311553612
Pubmed

The zinc finger cluster domain of RanBP2 is a specific docking site for the nuclear export factor, exportin-1.

RGPD4 RANBP2 RGPD3

1.01e-06981310601307
Pubmed

The cyclophilin-like domain mediates the association of Ran-binding protein 2 with subunits of the 19 S regulatory complex of the proteasome.

RGPD4 RANBP2 RGPD3

1.01e-0698139733766
Pubmed

Loss of Ranbp2 in motoneurons causes disruption of nucleocytoplasmic and chemokine signaling, proteostasis of hnRNPH3 and Mmp28, and development of amyotrophic lateral sclerosis-like syndromes.

RGPD4 RANBP2 RGPD3

1.01e-06981328100513
Pubmed

Impairments in age-dependent ubiquitin proteostasis and structural integrity of selective neurons by uncoupling Ran GTPase from the Ran-binding domain 3 of Ranbp2 and identification of novel mitochondrial isoforms of ubiquitin-conjugating enzyme E2I (ubc9) and Ranbp2.

RGPD4 RANBP2 RGPD3

1.01e-06981328877029
Pubmed

Association of the kinesin-binding domain of RanBP2 to KIF5B and KIF5C determines mitochondria localization and function.

RGPD4 RANBP2 RGPD3

1.01e-06981317887960
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

CCNE1 USP34 CNNM4 SRRM1 RANBP2 CLGN MDN1 MAP1B RRP12 EIF2B5 ING5 LARP1 HNRNPAB FKBP5 ITPR1

1.04e-061440811530833792
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

USP34 CASP8AP2 SETX DSP MCM3AP MACF1 CFAP44 FKBP5 TP53BP1 LUZP1

1.13e-06588811038580884
Pubmed

Comprehensive identification of phosphorylation sites in postsynaptic density preparations.

RGPD4 RANBP2 MAP1B RGPD3 MACF1 NCAM1 LUZP1

1.19e-0623181716452087
Pubmed

A direct physical interaction between Nanog and Sox2 regulates embryonic stem cell self-renewal.

RGPD4 RANBP2 ILF3 RGPD3 TET1 SALL4

1.24e-0614681623892456
Pubmed

USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.

SRRM1 FAT2 ILF3 MDN1 DSP GON4L MACF1

1.30e-0623481736243803
Pubmed

Ovarian tumorB1-mediated heat shock transcription factor 1 deubiquitination is critical for glycolysis and development of endometriosis.

RANBP2 SETX ILF3 EIF4ENIF1 DSP LARP1 PDCL

1.38e-0623681736339263
Pubmed

Cyclophilin-related protein RanBP2 acts as chaperone for red/green opsin.

RGPD4 RANBP2 RGPD3

1.44e-06108138857542
Pubmed

The RanBP2/RanGAP1*SUMO1/Ubc9 SUMO E3 ligase is a disassembly machine for Crm1-dependent nuclear export complexes.

RGPD4 RANBP2 RGPD3

1.44e-061081327160050
Pubmed

Parkin ubiquitinates and promotes the degradation of RanBP2.

RGPD4 RANBP2 RGPD3

1.44e-061081316332688
Pubmed

Ran-dependent docking of importin-beta to RanBP2/Nup358 filaments is essential for protein import and cell viability.

RGPD4 RANBP2 RGPD3

1.44e-061081321859863
Pubmed

Systematic identification of factors for provirus silencing in embryonic stem cells.

RGPD4 RANBP2 MDN1 RGPD3 SALL4 TP53BP1

1.62e-0615381626365490
Pubmed

RanBP2 modulates Cox11 and hexokinase I activities and haploinsufficiency of RanBP2 causes deficits in glucose metabolism.

RGPD4 RANBP2 RGPD3

1.98e-061181317069463
Pubmed

T-cell receptor (TCR) signaling promotes the assembly of RanBP2/RanGAP1-SUMO1/Ubc9 nuclear pore subcomplex via PKC-θ-mediated phosphorylation of RanGAP1.

RGPD4 RANBP2 RGPD3

1.98e-061181334110283
Pubmed

A human MAP kinase interactome.

CASP8AP2 RANBP2 SETX DSP MCM3AP ING5 NAV3 MACF1 CHD6

2.02e-0648681920936779
Pubmed

Tumor suppressor BAP1 nuclear import is governed by transportin-1.

PDIA4 SRRM1 RANBP2 ILF3 MDN1 MAP1B DSP RRP12 LARP1 MACF1 HNRNPAB FKBP5 LUZP1

2.44e-061149811335446349
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

SRRM1 RANBP2 SETX ILF3 GCC2 RRP12 LARP1 HNRNPAB TP53BP1

2.67e-0650381916964243
Pubmed

Quantitative Proteomics Links the LRRC59 Interactome to mRNA Translation on the ER Membrane.

PDIA4 CLGN ILF3 MDN1 RRP12 EIF2B5 LARP1 MXRA7

2.75e-0637581832788342
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

CNNM4 SRRM1 RANBP2 ILF3 EIF4ENIF1 DSP RRP12 MCM3AP LARP1 CHD6

2.96e-06655811035819319
Pubmed

Ankyrin-G induces nucleoporin Nup358 to associate with the axon initial segment of neurons.

RGPD4 RANBP2 RGPD3

3.42e-061381331427429
Pubmed

The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation.

PDIA4 ILF3 EIF4ENIF1 SLC20A1 VPS13C MCM3AP AATF CFAP298 FKBP5 SIL1 LUZP1 MXRA7

3.67e-061007811234597346
Pubmed

Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.

SETX ZBED4 RRP12 ADGRV1 SLC24A1

4.22e-061028159734811
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

SRRM1 ILF3 MAP1B CAPNS1 LARP1 BOD1L1 HNRNPAB TP53BP1

4.34e-0639981835987950
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

PDIA4 SRRM1 RANBP2 ILF3 MDN1 MAP1B DSP SLC20A1 RRP12 MACF1 AATF HNRNPAB

4.35e-061024811224711643
Pubmed

Cutting edge: double-stranded DNA breaks in the IgV region gene were detected at lower frequency in affinity-maturation impeded GANP-/- mice.

RAG1 MCM3AP

5.36e-06281216237049
Pubmed

Regulation of cell cycle of hepatocellular carcinoma by NF90 through modulation of cyclin E1 mRNA stability.

CCNE1 ILF3

5.36e-06281225399696
Pubmed

Differentiation of human pluripotent stem cells into neurons or cortical organoids requires transcriptional co-regulation by UTX and 53BP1.

KDM6A TP53BP1

5.36e-06281230718900
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

MAP1B RAPH1 DSP TET1 LARP1 BOD1L1 KDM6A TP53BP1 LUZP1

5.42e-0654981938280479
Pubmed

Limited expression of nuclear pore membrane glycoprotein 210 in cell lines and tissues suggests cell-type specific nuclear pores in metazoans.

RGPD4 RANBP2 RGPD3

5.43e-061581314697343
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

PDIA4 RANBP2 ILF3 EIF4ENIF1 MAP1B LARP1 MACF1 AATF LUZP1 MXRA7

7.13e-06724811036232890
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

SRRM1 RANBP2 SETX ILF3 ZBED4 MAP1B DSP RRP12 MACF1 CHD6 USP9Y HNRNPAB

7.58e-061082811238697112
Pubmed

Identification of RanBP 9/10 as interacting partners for protein kinase C (PKC) gamma/delta and the D1 dopamine receptor: regulation of PKC-mediated receptor phosphorylation.

MACF1 PRKCD ITPR1

8.08e-061781320395553
Pubmed

AirID, a novel proximity biotinylation enzyme, for analysis of protein-protein interactions.

RANBP2 EIF4ENIF1 SALL4

8.08e-061781332391793
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

PDIA4 SRRM1 ILF3 MDN1 EIF4ENIF1 VPS13C RRP12 PRKCD AATF PDCL HNRNPAB LUZP1 MXRA7 ITPR1

8.55e-061496811432877691
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

RANBP2 ILF3 MAP1B RAPH1 DSP RRP12 LARP1 MACF1 BOD1L1 HNRNPAB TP53BP1

1.08e-05934811133916271
Pubmed

DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity.

USP34 SETX ILF3 MDN1 BOD1L1 HNRNPAB TP53BP1 LUZP1

1.09e-0545381829656893
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

PDIA4 SRRM1 ILF3 FRMPD4 DSP RRP12 LARP1 AATF HNRNPAB LUZP1 ITPR1

1.25e-05949811136574265
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

RGPD4 RANBP2 FRMPD4 MAP1B DSP RGPD3 NAV3 MACF1 NCAM1 HNRNPAB TP53BP1 ITPR1

1.27e-051139811236417873
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

RANBP2 SETX SALL4 BOD1L1 CHD6 KDM6A TP53BP1 LUZP1

1.40e-0546981827634302
Pubmed

Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.

RANBP2 ILF3 DSP NAV3 KANK4 CHD6 TP53BP1 ITPR1

1.53e-0547581831040226
Pubmed

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.

RGPD4 SRRM1 RANBP2 ILF3 MAP1B DSP RGPD3 LARP1 LUZP1

1.54e-0562681933644029
Pubmed

Structural Analysis of the SANT/Myb Domain of FLASH and YARP Proteins and Their Complex with the C-Terminal Fragment of NPAT by NMR Spectroscopy and Computer Simulations.

CASP8AP2 GON4L

1.60e-05381232722282
Pubmed

PLCγ1-PKCε-IP3R1 signaling plays an important role in hypoxia-induced calcium response in pulmonary artery smooth muscle cells.

PRKCD ITPR1

1.60e-05381229388468
Pubmed

A conserved interaction that is essential for the biogenesis of histone locus bodies.

CASP8AP2 GON4L

1.60e-05381225339177
Pubmed

A systems-wide screen identifies substrates of the SCFβTrCP ubiquitin ligase.

RANBP2 ILF3 EIF4ENIF1 MAP1B LPIN2 AATF

1.77e-0523281625515538
Pubmed

Terminal differentiation of cortical neurons rapidly remodels RanGAP-mediated nuclear transport system.

RGPD4 RANBP2 RGPD3

1.82e-052281327717094
Pubmed

Interactome analysis of the human Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (hMTr1) protein.

SRRM1 ILF3 MAP1B LARP1 HNRNPAB

1.84e-0513881530320910
Pubmed

Phosphoproteomic analysis of the developing mouse brain.

USP34 SRRM1 EIF4ENIF1 MAP1B NCAM1 KDM6A

2.45e-0524681615345747
Pubmed

SLFN11 promotes CDT1 degradation by CUL4 in response to replicative DNA damage, while its absence leads to synthetic lethality with ATR/CHK1 inhibitors.

RANBP2 SETX MAP1B RRP12 AATF TP53BP1

2.69e-0525081633536335
Pubmed

Cullin 1 (CUL1) Promotes Primary Ciliogenesis through the Induction of Ubiquitin-Proteasome-Dependent Dvl2 Degradation.

FAT2 VPS13C MACF1 ADGRV1 BICD1

2.93e-0515281534299191
Pubmed

The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.

RANBP2 EIF4ENIF1 RAPH1 DSP LARP1 LUZP1

3.07e-0525681633397691
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

PDIA4 CNNM4 RANBP2 RAPH1 DSP RRP12 AATF KDM6A FKBP5 LUZP1 ITPR1

3.14e-051049811127880917
Pubmed

Increased proliferation of B cells and auto-immunity in mice lacking protein kinase Cdelta.

RAG1 PRKCD

3.20e-05481211976687
Pubmed

Ryanodine receptor calcium release channels: lessons from structure-function studies.

RYR3 ITPR1

3.20e-05481223413940
InteractionNUP43 interactions

USP34 SRRM1 CASP8AP2 RANBP2 SETX EIF4ENIF1 DSP MCM3AP EIF2B5 LARP1 GON4L AATF BOD1L1 CHD6 PDCL

2.45e-086258115int:NUP43
InteractionKIF20A interactions

RGPD4 SRRM1 RANBP2 SETX ILF3 EIF4ENIF1 DSP RGPD3 EIF2B5 NAV3 LARP1 MACF1 BOD1L1 TNNC2 USP9Y HNRNPAB LUZP1 ITPR1

1.44e-0710528118int:KIF20A
InteractionRCOR1 interactions

USP34 CASP8AP2 RANBP2 EIF4ENIF1 RAPH1 DSP GCC2 TET1 CHD6 RREB1 TP53BP1 LUZP1

6.28e-074948112int:RCOR1
InteractionPHF21A interactions

USP34 CASP8AP2 RANBP2 EIF4ENIF1 DSP GCC2 TET1 CHD6 RREB1 LUZP1

1.15e-063438110int:PHF21A
InteractionCIT interactions

RAG1 SRRM1 RANBP2 CLGN SETX ILF3 DSP RRP12 RGPD3 LARP1 MACF1 AATF BOD1L1 ADGRV1 RREB1 SPAG17 HNRNPAB LUZP1 BICD1

3.49e-0614508119int:CIT
InteractionSIRT7 interactions

PDIA4 USP34 SRRM1 RANBP2 MDN1 MAP1B DSP RRP12 MCM3AP LARP1 MACF1 AATF TP53BP1

7.89e-067448113int:SIRT7
InteractionSOX2 interactions

USP34 RANBP2 ILF3 MDN1 MAP1B DSP RRP12 ING5 NAV3 LARP1 MACF1 PRKCD SALL4 BOD1L1 CHD6 KDM6A LUZP1

4.11e-0514228117int:SOX2
InteractionDUSP1 interactions

SRRM1 ILF3 DSP LARP1 HNRNPAB

4.93e-0599815int:DUSP1
InteractionAURKB interactions

SRRM1 RANBP2 SETX EIF4ENIF1 MAP1B DSP RRP12 LARP1 MACF1 TNNC2 ADGRV1 FKBP5

4.99e-057618112int:AURKB
InteractionECT2 interactions

SRRM1 ILF3 DSP VPS13C RRP12 NAV3 LARP1 MACF1 AATF BOD1L1 USP9Y LUZP1 ITPR1

4.99e-058878113int:ECT2
InteractionMEN1 interactions

SRRM1 ILF3 MDN1 RRP12 MCM3AP EIF2B5 LARP1 PRKCD AATF BOD1L1 KDM6A HNRNPAB TP53BP1 LUZP1

5.56e-0510298114int:MEN1
InteractionDHX16 interactions

SRRM1 ILF3 GCC2 GON4L PRKCD AATF

6.99e-05173816int:DHX16
InteractionPML interactions

USP34 CASP8AP2 RANBP2 SETX ILF3 MDN1 MAP1B RRP12 RGPD3 LARP1 TNNC2 TP53BP1 LUZP1

8.34e-059338113int:PML
InteractionRGPD4 interactions

RGPD4 RANBP2 RGPD3

9.12e-0522813int:RGPD4
InteractionGSK3A interactions

SRRM1 MDN1 EIF4ENIF1 EIF2B5 MACF1 PRKCD PDCL LUZP1 BICD1

1.01e-04464819int:GSK3A
InteractionRNF123 interactions

SETX MDN1 ZBED4 DSP CSNK1G2 VPS13C MCM3AP BRME1 LARP1 BOD1L1 CHD6 CFAP44

1.06e-048248112int:RNF123
InteractionIFI16 interactions

PDIA4 SRRM1 ILF3 MAP1B RRP12 MCM3AP RGPD3 LARP1 AATF HNRNPAB TP53BP1

1.30e-047148111int:IFI16
InteractionSNCA interactions

SRRM1 ILF3 MAP1B RAPH1 DSP VPS13C RRP12 LARP1 MACF1 PRKCD RREB1

1.33e-047168111int:SNCA
InteractionSMC5 interactions

SRRM1 RANBP2 SETX ILF3 MAP1B DSP LARP1 AATF BOD1L1 RREB1 HNRNPAB TP53BP1 LUZP1

1.66e-0410008113int:SMC5
InteractionRGPD2 interactions

RGPD4 RANBP2 RGPD3

1.71e-0427813int:RGPD2
InteractionGSK3B interactions

PDIA4 CCNE1 EIF4ENIF1 MAP1B EIF2B5 MACF1 PRKCD CHD6 PDCL FKBP5 LUZP1 BICD1

1.73e-048688112int:GSK3B
InteractionCHD3 interactions

SRRM1 SETX ILF3 MDN1 DSP RRP12 LARP1 AATF SALL4 CHD6 HNRNPAB

2.16e-047578111int:CHD3
InteractionMAPRE1 interactions

RANBP2 MAP1B RAPH1 GCC2 NAV3 LARP1 MACF1 LUZP1 BICD1

2.18e-04514819int:MAPRE1
InteractionMAU2 interactions

RANBP2 SETX MDN1 CFAP298 TP53BP1

2.21e-04136815int:MAU2
Cytoband2q12.3

RGPD4 RANBP2 GCC2

3.53e-06178132q12.3
CytobandEnsembl 112 genes in cytogenetic band chr2q12

RGPD4 GCC2 RGPD3

4.24e-0482813chr2q12
Cytoband5q13

MAP1B ADGRV1

6.94e-04228125q13
Cytoband6q15

CASP8AP2 MDN1

1.38e-03318126q15
GeneFamilyTetratricopeptide repeat domain containing|Bardet-Biedl syndrome associated|BBSome

RGPD4 RANBP2 RGPD3 KDM6A FKBP5

2.57e-05115555769
GeneFamilyEF-hand domain containing|Plakins

DSP MACF1

2.51e-048552939
GeneFamilyEF-hand domain containing

CAPNS1 CAPNS2 MACF1 TNNC2 RYR3

5.30e-04219555863
CoexpressionGSE360_L_MAJOR_VS_T_GONDII_DC_DN

PDIA4 TGFB3 MDN1 FRMPD4 ZBED4 BRME1 RYR3 BICD1

1.85e-07198818M5208
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

CCNE1 SRRM1 CASP8AP2 SETX MDN1 ZBED4 MAP1B SLC20A1 GCC2 TET1 MACF1 SALL4 BOD1L1 PDCL ADGRV1 TP53BP1 LUZP1 RAD54L BICD1

1.18e-0614597919facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

CCNE1 SRRM1 CASP8AP2 SETX MDN1 ZBED4 SLC20A1 GCC2 TET1 MACF1 BOD1L1 PDCL TP53BP1 LUZP1 RAD54L BICD1

1.29e-0512577916facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasdev gonad_e13.5_F_MeioticGermCell_Oct_top-relative-expression-ranked_1000

CCNE1 CASP8AP2 GMCL1 SETX MDN1 DSP TET1 BRME1 AATF SALL4 TDRD1 RAD54L

4.82e-058207912gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5

CASP8AP2 SLC20A1 GCC2 MACF1 BOD1L1 LUZP1

6.82e-05186796Facebase_RNAseq_e10.5_Mandibular Arch_500_K5
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

USP34 RANBP2 SLC20A1 VPS13C MACF1 ZNF407 KDM6A TP53BP1 ITPR1

6.45e-11188819ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell10x5'-blood-Lymphocytic_T_CD4-T_CD4/CD8|blood / Manually curated celltypes from each tissue

USP34 RANBP2 MACF1 USP9Y KDM6A ITPR1

5.16e-07162816b4535bcb3f469bc139e73f1122f4070013e5a1de
ToppCell3'-Broncho-tracheal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.0.5|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DSP SLC20A1 ZNF648 MACF1 SALL4 ADGRV1

9.24e-071798166e965e424eebef50f0202cff75f458be395cfca1
ToppCelldroplet-Marrow-nan-3m-Hematologic-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CASP8AP2 SETX GCC2 TET1 MACF1 BOD1L1

1.02e-06182816e78ba2c5cae480c16a596ce7c3bf2d480becacf4
ToppCelldroplet-Marrow-nan-3m-Hematologic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CASP8AP2 SETX GCC2 TET1 MACF1 BOD1L1

1.02e-061828161710eab3037a87609d21838be2d2d29c3bc36651
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FRMPD4 NAV3 SALL4 ADGRV1 SPAG17 RYR3

1.08e-061848162cbed6462fea2622871bb7e49b0df3d984239281
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FRMPD4 NAV3 SALL4 ADGRV1 SPAG17 RYR3

1.08e-06184816ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FRMPD4 NAV3 SALL4 ADGRV1 SPAG17 RYR3

1.08e-061848162b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellTCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1|TCGA-Pancreas / Sample_Type by Project: Shred V9

USP34 CASP8AP2 SETX GCC2 BOD1L1 LUZP1

1.16e-0618681603db813598b67b1e08f759758a1c2023396921fa
ToppCell(04)_Interm._basal>secr.-(2)_GFP_FOXI1|(04)_Interm._basal>secr. / shred by cell type by condition

SRRM1 SETX VPS13C GCC2 LPIN2 BOD1L1

1.71e-0619981653ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

SRRM1 MAP1B VPS13C GCC2 LPIN2 BOD1L1

1.71e-06199816c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCellVE|World / Condition, Cell_class and T cell subcluster

SETX CSNK1G2 VPS13C MACF1 BOD1L1 HNRNPAB

1.76e-062008168ae7cb81de3ffac5acdf3466d4b516d80cac95d3
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Fibroblasts|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

TGFB3 HTR4 RRP12 TDRD1 ITPR1

1.00e-05157815f086753b51860e23f1275bd75e8802d2a7d7b70a
ToppCellCerebellum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Gad1Gad2.Lgi2_(Golgi_interneuron)--|Cerebellum / BrainAtlas - Mouse McCarroll V32

HTR4 CAPNS2 GPR101 TDRD1

1.19e-0577814afe990041849a68fd75e0c11b633a7b90fefade1
ToppCellCerebellum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Gad1Gad2.Lgi2_(Golgi_interneuron)|Cerebellum / BrainAtlas - Mouse McCarroll V32

HTR4 CAPNS2 GPR101 TDRD1

1.19e-0577814ec8f625cae561986ed27dfaefa8f822dd1c4fba1
ToppCellCerebellum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Gad1Gad2.Lgi2_(Golgi_interneuron)-|Cerebellum / BrainAtlas - Mouse McCarroll V32

HTR4 CAPNS2 GPR101 TDRD1

1.19e-0577814af7e1e76db33b115238b6fc61fc0dd86aab8e49d
ToppCelldroplet-Heart-nan-3m|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

AKAP6 RANBP2 VPS13C MACF1 KDM6A

1.74e-05176815749b47eac5436fa34e0d243ffbc6f1897f4e431e
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DCDC2 FOXN4 LRRC43 SPAG17 FLACC1

1.74e-05176815d6d7e4e937d49a5c0d16322c8dd3bf9e97eb8732
ToppCellPND10-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal-Deuterosomal_mature|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DCDC2 FOXN4 LRRC43 SPAG17 FLACC1

1.74e-05176815c03d80df2550c0d2b0452326480d6bf21d20fdd2
ToppCelldroplet-Limb_Muscle-MUSCLE-30m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SRRM1 CASP8AP2 RANBP2 VPS13C LUZP1

1.84e-0517881501dafd19de04eff459253eaa9a35debf8f3deedf
ToppCelldroplet-Marrow-nan-3m-Myeloid-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RAG1 VPS13C GCC2 MACF1 KDM6A

2.05e-05182815f8c73baaaca145e2efc48f10f636feb79c8fc779
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SETX VPS13C GCC2 MACF1 KDM6A

2.16e-051848151154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellNS-moderate-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

AKAP6 MAP1B SPAG17 CFAP44 FLACC1

2.21e-051858155e689c2fb36ce3ac2adc8d15f67107f21cf68868
ToppCelldroplet-Marrow-nan-3m-Myeloid|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RAG1 VPS13C GCC2 MACF1 KDM6A

2.21e-051858157adfa929930cfa795cbfbd9f1a0b439e08aa765d
ToppCelldroplet-Lung-1m-Epithelial-airway_epithelial-lung_ciliated_cell-ciliated_cell|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DCDC2 LRRC43 SPAG17 SLC44A4 CFAP44

2.39e-05188815bc0b9ba8ae88e8a89e98b446584ed39606e4229e
ToppCelldroplet-Lung-1m-Epithelial-airway_epithelial|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DCDC2 LRRC43 SPAG17 SLC44A4 CFAP44

2.39e-0518881550994e304c719f2f3c3232e48141e2dd15c96612
ToppCelldroplet-Lung-1m-Epithelial-airway_epithelial-lung_ciliated_cell|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DCDC2 LRRC43 SPAG17 SLC44A4 CFAP44

2.39e-05188815a7b7ba56603a8a50869b41902aed6a9ab1c5c021
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DCDC2 FOXN4 LRRC43 SPAG17 CFAP44

2.58e-051918151e21de183a9c09cfb6aad3f9b948087fb6bad061
ToppCellPND07-Epithelial-Epithelial_Airway|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DCDC2 CAPNS2 LRRC43 SPAG17 CFAP44

2.58e-05191815b55500eb416f4f339031acad16b2737e5b891d8e
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal-Deuterosomal_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DCDC2 FOXN4 LRRC43 SPAG17 CFAP44

2.58e-051918158688708c9183ebcb200596501dc30cc12073f151
ToppCellhuman_hepatoblastoma-Tumor_cells|World / Sample and Cell Type and Tumor Cluster (all cells)

DCDC2 DSP GCC2 CHD6 KDM6A

2.65e-05192815916fbec1c7ab7969bda711886ac88e877e30c280
ToppCellE16.5-Epithelial-Epithelial_Airway|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DCDC2 FOXN4 LRRC43 SPAG17 CFAP44

2.65e-05192815bb7eb51bc079acacde42d8e55ba06d03eba2ea28
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

RANBP2 SLC20A1 RRP12 MACF1 KDM6A

2.65e-0519281547646d7e4990be85072987f92bf18d52f8da752e
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

DCDC2 FOXN4 LRRC43 SPAG17 CFAP44

2.65e-05192815a50a6279371b3be682e334082637b7ab76b9a6e5
ToppCellfacs-Brain_Myeloid-Hippocampus-3m-Myeloid|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDIA4 LPIN2 NAV3 MACF1 FKBP5

2.71e-0519381506b65110db974f4ef90d3511ff34428976a52c9c
ToppCellfacs-Brain_Myeloid-Hippocampus-3m-Myeloid-microglial_cell|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDIA4 LPIN2 NAV3 MACF1 FKBP5

2.71e-051938159c16032bc03df8760ae199e8f19fdafa4c3f1827
ToppCellfacs-Brain_Myeloid-Hippocampus-3m|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDIA4 LPIN2 NAV3 MACF1 FKBP5

2.71e-05193815a4f91bca5eaa985982d33a528f7566ffde154d47
ToppCellhuman_hepatoblastoma|World / Sample and Cell Type and Tumor Cluster (all cells)

DCDC2 DSP GCC2 CHD6 KDM6A

2.71e-05193815e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCellfacs-Brain_Myeloid-Hippocampus-3m-Myeloid-nan|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PDIA4 LPIN2 NAV3 MACF1 FKBP5

2.71e-05193815b39d7feaac4ff8f7409cd3d15e8f3c6391367275
ToppCelldroplet-Limb_Muscle-MUSCLE|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

USP34 RANBP2 MACF1 FKBP5 LUZP1

2.78e-05194815e3d63874111d1e8da3977329426e4dcf68d6de87
ToppCellASK440-Epithelial-Ciliated|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

SPAG17 SLC44A4 CFAP44 CFAP298 FLACC1

2.78e-05194815c84a7fa94fb06e08aae04db56c8c313b0afde1d7
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MAP1B LPIN2 BRME1 NCAM1 SALL4

2.78e-0519481590efdbd7f1c85fd7fd622b10340250b1d8fc1197
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast-|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MAP1B LPIN2 BRME1 NCAM1 SALL4

2.78e-05194815df82cce5ebeb73740b02cf816c6df82253cfd566
ToppCellASK452-Endothelial-Lymphatic|Endothelial / Donor, Lineage and Cell class of Lung cells from Dropseq

MAP1B RAPH1 DSP SLC24A1 BICD1

2.85e-0519581520f492299a684ac1b7dd1bbc36a533cd6f9a1c93
ToppCellBronchial-NucSeq-Epithelial-Epi_submucosal-gland-Myoepithelial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

RAG1 FAT2 MAP1B NAV3 RYR3

2.92e-05196815a58bdf9de05d13d84211e09a933679d485bf8ab4
ToppCellLPS_anti-TNF-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

PDIA4 DCDC2 DSP KANK4 SLC44A4

2.99e-051978151485933986921ff45669d9b7501c8d17050b3e97
ToppCellTCGA-Skin-Metastatic-Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

USP34 RANBP2 VPS13C GCC2 ITPR1

3.07e-05198815af4fb9eb2295c7b90624b38ba25619aa15254efa
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

SETX VPS13C GCC2 MACF1 FKBP5

3.07e-051988154c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCellLPS_IL1RA-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

PDIA4 DCDC2 DSP KANK4 ADGRV1

3.07e-05198815285f729140b1df029c24f6ca1d2438470ac51794
ToppCellTCGA-Skin-Metastatic|TCGA-Skin / Sample_Type by Project: Shred V9

USP34 RANBP2 VPS13C GCC2 ITPR1

3.07e-05198815ad39cce004867f083f8da1954e0cf5a263815184
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

SRRM1 VPS13C GCC2 BOD1L1 CFAP298

3.07e-0519881576d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCellTCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

USP34 RANBP2 VPS13C GCC2 ITPR1

3.07e-0519881562cbf4b29e8af4983fb47a17f96da62682a5137e
ToppCellPSB|World / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DCDC2 MAP1B DSP SPAG17 SLC44A4

3.07e-051988154e6b0d1abc55d7a0d89bd7ecf0f13dc5bed66626
ToppCell(10)_Ciliated-(2)_GFP_FOXI1|(10)_Ciliated / shred by cell type by condition

SETX VPS13C GCC2 BOD1L1 SPAG17

3.14e-0519981561b1ed2db71b96157b92b7535d1955a4033098da
ToppCell(00)_Basal-(2)_GFP_FOXI1|(00)_Basal / shred by cell type by condition

SRRM1 SETX GCC2 BOD1L1 LUZP1

3.14e-0519981519674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

SRRM1 SETX VPS13C GCC2 BOD1L1

3.14e-05199815fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCellLPS_IL1RA-Mesenchymal_myocytic-Pericyte-Pericyte_3|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

AKAP6 TGFB3 MAP1B NCAM1 ITPR1

3.22e-05200815a3a1e35934d676c39f917652e50c502cb2f613c1
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

USP34 SETX VPS13C MACF1 BOD1L1

3.22e-0520081512f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell(08)_Brush+PNEC-(2)_GFP_FOXI1|(08)_Brush+PNEC / shred by cell type by condition

SRRM1 GCC2 BOD1L1 LUZP1

1.17e-04138814817e3f639604ea95adae01e8685ffaa2e0aff7a8
ToppCellfacs-Lung-Endomucin-24m-Endothelial-Capillary_Type_1_Cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FRMPD4 HTR4 ADGRV1 USP9Y

1.42e-0414581496712c68ab759d7ade0d912581a1a7c25dc6def8
ToppCellmild_COVID-19_(asymptomatic)-CD8+_T_naive|mild_COVID-19_(asymptomatic) / disease group, cell group and cell class (v2)

CCNE1 ANO9 CNPY4 LRRC43

1.83e-04155814e2c901d5c9e42d25d7702e5e8fc19b06f7c817be
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Peritubular_Capilary_Endothelial_Cell__prolif|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

CASP8AP2 NAV3 CFAP298 RYR3

1.88e-04156814f894fac4e44a23718b20ad80c9677bf4f2118002
ToppCell10x5'-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8|bone_marrow / Manually curated celltypes from each tissue

RANBP2 SLC20A1 MACF1 KDM6A

1.88e-041568141545169694f686d28648a68b552c2ae606599d66
ToppCellNS-moderate-d_07-13-Epithelial-FOXN4+|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DCDC2 FOXN4 SPAG17 RAD54L

1.93e-04157814410c9d74a2085179cfb39853cb6d330fa98c9c1b
ToppCellwk_15-18-Epithelial-Proximal_epithelial-basal_intermediate_|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

FAT2 FRMPD4 DSP CAPNS2

1.97e-0415881498712ed7e8e65e8c5ff9318cf0e0a04e271a055d
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Oligoastrocytoma|TCGA-Brain / Sample_Type by Project: Shred V9

AKAP6 MDN1 NCAM1 ADGRV1

2.12e-04161814347edb0de10850b7d16c40945751033289289c9b
ToppCellE16.5-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal-Deuterosomal_G2M|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

FOXN4 LRRC43 SPAG17 CFAP44

2.28e-04164814d9531848105d606adedde65426177cf851140e31
ToppCellPND07-Epithelial-Epithelial_Airway-Basal-Basal-Basal_prolif|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCNE1 DSP CAPNS2 KANK4

2.44e-0416781429d271643f3a1718b53db77b7d093ec94225a824
ToppCellE18.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CASP8AP2 BRME1 MACF1 RYR3

2.55e-0416981416c52a0f6d96ecc1832922fce9b39691849f0d73
ToppCellTCGA-Liver-Primary_Tumor-Hepatocellular_Carcinoma-Hepatocellular_Carcinoma-4|TCGA-Liver / Sample_Type by Project: Shred V9

ZBED4 TET1 ING5 SALL4

2.55e-041698140a3ba6b5d6cff9d3d7f56046063cfc3a37ae1156
ToppCellfacs-Marrow-KLS-3m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FOXN4 KANK4 SALL4 RYR3

2.55e-04169814d18b823836ca6fba79a2d2f10cb9966fa2623af2
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling-Cycling_Distal_Convoluted_Tubule_Cell_S-high|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

CCNE1 CASP8AP2 BRME1 RAD54L

2.55e-04169814e7514956b2e4298222ec443f98b2f5289451786e
ToppCellfacs-Marrow-KLS-3m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FOXN4 KANK4 SALL4 RYR3

2.55e-04169814befb9b1618ea30fbf8983bcc493853da53b809c3
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Outer_Medullary_Collecting_Duct_Principal_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

DCDC2 FAT2 SPAG17 BICD1

2.61e-04170814928e42c51a7079c506f21c669c4e4c1a0df84d77
ToppCellnormal-na-Lymphocytic_T-T4_em-male|normal / PBMC cell types (v2) per disease, treatment status, and sex

FAT2 GCC2 MACF1 FKBP5

2.67e-0417181461318a7aaf3bd8bdd28f8a8614ab4fdf2964b3a3
ToppCellCiliated_cells-B-IPF_04|World / lung cells shred on cell class, cell subclass, sample id

MAP1B SPAG17 SLC44A4 CFAP44

2.73e-04172814187ae91148d293537afc77e10da2b64302322224
ToppCell3'-Distal_airway-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

LRRC43 SPAG17 SLC44A4 CFAP44

2.79e-04173814c3762655caa79ac4879876f470d32578a3c93b01
ToppCelldroplet-Lung-21m-Epithelial-airway_epithelial|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DCDC2 FOXN4 SPAG17 CFAP44

2.79e-04173814a809be2630d2b91b53b82b5e2bb99e05524597c1
ToppCelldroplet-Kidney-nan-18m-Lymphocytic-CD45____plasma_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

AKAP6 PDIA4 CCNE1 SIL1

2.79e-0417381460e427f6c7d953cef5f692043670ff0b49cdce72
ToppCelldroplet-Lung-nan-21m-Epithelial-Ciliated_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DCDC2 FOXN4 SPAG17 CFAP44

2.91e-041758143ed22ea41810e73c02db4f2d03745e4ce7e43bb1
ToppCell368C-Epithelial_cells-Epithelial-J_(AT1-AT2_progenitors)-|368C / Donor, Lineage, Cell class and subclass (all cells)

CNNM4 BRME1 ADGRV1 RAD54L

2.91e-04175814fd8b5b756f3df4a04938785f3d9edbb6f1cd20f6
ToppCelldroplet-Lung-nan-21m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DCDC2 FOXN4 SPAG17 CFAP44

2.91e-041758148fb1e5f6aa68274adf322401db8c7b80e8c554d7
ToppCell368C-Epithelial_cells-Epithelial-J_(AT1-AT2_progenitors)|368C / Donor, Lineage, Cell class and subclass (all cells)

CNNM4 BRME1 ADGRV1 RAD54L

2.91e-0417581436c140540497bbe1c5f08fac2d94f08cac18fabb
ToppCelldroplet-Liver-Npc-21m-Epithelial-nan|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MCM3AP FLACC1 TP53BP1

2.94e-0471813cf4c8715c2bd77fc86e45cc01bcc7aa6044e091d
ToppCellPND10-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_prolif|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CCNE1 CASP8AP2 KANK4 MACF1

2.98e-04176814d30241fb8119834d6e7b59efec3f92fc7a3d1247
ToppCell3'-Broncho-tracheal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

AKAP6 SLC44A4 CFAP44 FLACC1

2.98e-04176814dee780cfa85234a7cd7bf440b66b84cec959893e
ToppCelldroplet-Lung-21m-Epithelial-airway_epithelial-lung_ciliated_cell|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DCDC2 FOXN4 SPAG17 CFAP44

3.04e-04177814d947ba38db1772fc5fdcdc211f7511c4aa699dee
ToppCelldroplet-Lung-21m-Epithelial-airway_epithelial-lung_ciliated_cell-ciliated_cell|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DCDC2 FOXN4 SPAG17 CFAP44

3.04e-04177814d5640f0097878f0dac671e51dc51310278bb2682
ToppCelldroplet-Kidney-nan-18m-Epithelial-Epcam____podocyte|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DCDC2 FAT2 MAP1B NCAM1

3.11e-04178814445fb243d738a34794d66f34b92dde1f3ea6738e
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

LRRC43 SPAG17 SLC44A4 CFAP44

3.24e-0418081492fb01b91261b3103454924cde56add337b41844
ToppCell10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8|Liver / Manually curated celltypes from each tissue

USP34 RANBP2 MACF1 KDM6A

3.31e-04181814f2315414e714ac86211546a935660c4be6e85f1b
ToppCelldroplet-Kidney-nan-18m-Epithelial-podocyte|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DCDC2 HTR4 MAP1B DSP

3.38e-041828149fc2f84bf70ad9a11c8a7326bd101e6f6cbcc33e
ToppCellfacs-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l25-31|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

AKAP6 KANK4 NCAM1 BICD1

3.38e-04182814a1c0e4090a9e7aa4941a40c817d178de144888b6
ToppCelldroplet-Lung-LUNG-30m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DCDC2 SPAG17 SLC44A4 CFAP44

3.45e-041838143991830726d05cf19606d540de04093985b7bdeb
ToppCelldroplet-Lung-LUNG-30m-Epithelial-Ciliated_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DCDC2 SPAG17 SLC44A4 CFAP44

3.45e-04183814cc844f54c7564bf432b179ca63bc7c4b9b8cfdd9
ToppCellfacs-Lung-EPCAM-24m-Epithelial-ciliated_columnar_cell_of_tracheobronchial_tree|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRRC43 SPAG17 SLC44A4 CFAP44

3.52e-04184814afb11ab301ef9801333dbb53ccff4bd0d44f1677
ToppCell(2)_5-FU-(4)_COL2.3+_osteoblasts|World / Stress and Cell class

TGFB3 NCAM1 SLC39A13 MXRA7

3.52e-04184814684d05340a3dfb8aa08b881516a37f9627a10448
ToppCellP07-Epithelial-airway_epithelial_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

DCDC2 LRRC43 SPAG17 CFAP44

3.52e-04184814a5e7af3392e9d6ddad0397f1eeb6b91ed1107cc2
ToppCellP07-Epithelial-airway_epithelial_cell-club_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

DCDC2 LRRC43 SPAG17 CFAP44

3.52e-04184814ab469b9e06212462cbe2e4db8775c6778db855e6
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive|renal_medulla_nuclei / Celltypes from Cells and Nuclei per compartment and clinical group

DCDC2 MACF1 KDM6A FKBP5

3.52e-04184814d2bf0135eb56bb410997dccea39c5ede88a0617f
Drugindo-1

PDIA4 PRKCD TNNC2 ADGRV1 RYR3 ITPR1

1.45e-0699816CID000105060
DrugThimerosal

USP34 SRRM1 SETX ILF3 TET1 NAV3 GON4L NCAM1 SALL4 BOD1L1 ADGRV1 CFAP44 KDM6A TP53BP1 LUZP1 RYR3

4.17e-0611998116ctd:D013849
DrugPiroxicam [36322-90-4]; Down 200; 12uM; HL60; HG-U133A

SETX ILF3 ZBED4 VPS13C MCM3AP LUZP1 BICD1

5.97e-061948171405_DN
DiseaseNonsyndromic Deafness

TGFB3 DCDC2 ADGRV1 SLC44A4

6.44e-0581784C3711374
Diseasethalamus volume

MACF1 NCAM1 ADGRV1 BICD1

7.78e-0585784EFO_0006935
DiseaseArrhythmogenic right ventricular cardiomyopathy

TGFB3 DSP

1.44e-047782cv:C0349788
Diseasealpha fetoprotein measurement

USP34 SETX TET1 TP53BP1

1.46e-04100784EFO_0010583
DiseaseAtaxias, Hereditary

SETX SIL1

1.91e-048782C0004138
Diseasesynaptotagmin-11 measurement

GON4L RREB1

2.45e-049782EFO_0802108
Diseasearrhythmogenic right ventricular cardiomyopathy (is_implicated_in)

TGFB3 DSP

3.06e-0410782DOID:0050431 (is_implicated_in)
Diseasesphingosine 1-phosphate measurement

KDM6A ITPR1

1.03e-0318782EFO_0800185
Diseasepulse pressure measurement

USP34 CLGN HTR4 MAP1B RAPH1 TET1 NCAM1 GPR101 RREB1 LUZP1 MXRA7

1.05e-0313927811EFO_0005763
Diseasepulmonary function measurement

DCDC2 HTR4 ITPR1

1.13e-0377783EFO_0003892
Diseasecoffee consumption measurement

AKAP6 NCAM1 SLC44A4 BICD1

1.40e-03182784EFO_0006781
Diseasereaction time measurement

AKAP6 CCNE1 ZNF648 TET1 CHD6 TNNC2 MXRA7

1.79e-03658787EFO_0008393
DiseaseUterine leiomyoma

ING5 NCAM1 ITPR1

1.83e-0391783HP_0000131
Diseasenevus count, cutaneous melanoma

ANO9 ADGRV1 FLACC1

1.83e-0391783EFO_0000389, EFO_0004632
DiseaseSquamous cell carcinoma of esophagus

FAT2 SALL4 KDM6A

2.07e-0395783C0279626
DiseaseMalignant neoplasm of breast

AKAP6 CCNE1 CNNM4 RAPH1 MACF1 BOD1L1 FLACC1 TP53BP1 RAD54L

2.08e-031074789C0006142
Diseasephosphatidylcholine 38:4 measurement

FRMPD4 ADGRV1

2.49e-0328782EFO_0010386
Diseasehemoglobin A1 measurement

LARP1 MACF1 RREB1 FLACC1 HNRNPAB BICD1

2.56e-03520786EFO_0007629

Protein segments in the cluster

PeptideGeneStartEntry
KENADQSDPEDVGKM

TDRD1

456

Q9BXT4
EEEEGGDKMTKTGSH

CNPY4

226

Q8N129
KFAEDGSEPNNDDKM

BICD1

271

Q96G01
ETSGTVNFMDGEEAK

ADGRV1

1171

Q8WXG9
KERDTMKEDGGAEFS

CCNE1

11

P24864
KTSAGETFEDLMKDG

ANO9

131

A1A5B4
EGADNKELAMKAESG

CASP8AP2

531

Q9UKL3
MKEPDDQDTDGEKSV

CFAP44

1

Q96MT7
KDFEGMAFLETEQGK

GMCL1

311

Q96IK5
FADKEEGGDVKSVCM

RAG1

421

P15918
MANKANTSGDFEKDD

RANBP2

1986

P49792
DSDKEDQDLDKMFGA

RAPH1

16

Q70E73
GSKDEIDQKLEGFMN

RAD54L

246

Q92698
FAEQDAKEEANKAMG

FKBP5

416

Q13451
KGTDSQAMEEEKPEG

FKBP5

441

Q13451
MKEQEKGEGSDSKES

LARP1

206

Q6PKG0
KGEDNAIEMSEDFDG

MDN1

4721

Q9NU22
DFGQEKKTDDVEAMS

MAP1B

1471

P46821
AEDGEMKGNEGETES

SLC24A1

816

O60721
FEMESGEEDKKINES

FLACC1

266

Q96Q35
ETMDGASGENEHKKT

ITPR1

1151

Q14643
FEKKTGVAGEDMQDN

PRKCD

316

Q05655
KVKFMGDEGSVDDTS

MCM3AP

1386

O60318
MDFDKKGGKGETEEG

CSNK1G2

1

P78368
EEKKMAAGKASGESE

KDM6A

21

O15550
SDDSGADQEKDKVKM

EIF2B5

466

Q13144
GGDKDMDFDIEKTTG

FAT2

1386

Q9NYQ8
GKDDDAFSESGEMEG

NAV3

411

Q8IVL0
GSMEGKEGSTKVEEN

GPR101

316

Q96P66
TSSEKGKEADTEMGF

MACF1

3026

Q9UPN3
DMENSFKEGKEPSEI

MACF1

3951

Q9UPN3
MANKANTSGDFEKDD

RGPD3

1011

A6NKT7
MADKEKSTADSGGEG

BOD1L1

256

Q8NFC6
MEFENKEDLSGTQAG

CFAP298

166

P57076
KEEMKDEDRGSGAFS

BRME1

116

Q0VDD7
EGSELKSEDMDFENK

CHD6

2016

Q8TD26
GTKTAEMEEEASGKF

FRMPD4

1051

Q14CM0
GSEMFGDDDKRKIQS

DSP

596

P15924
MDSDTTGKLGFEEFK

CAPNS2

131

Q96L46
MDSDTTGKLGFEEFK

CAPNS1

151

P04632
GFLKEMGSEVSEDSE

GCC2

761

Q8IWJ2
DDSKEGAGEQKTEHM

ILF3

71

Q12906
GAKEAGQGKDMMEEE

GON4L

1906

Q3T8J9
MDKLDANVSSEEGFG

HTR4

1

Q13639
ENDKDAGMENESVKS

LUZP1

706

Q86V48
LKDKMEGSDFESSGG

ING5

111

Q8WYH8
MEKTDAKDQSSQGDE

KANK4

1

Q5T7N3
MGGKQRDEDDEAYGK

SLC44A4

1

Q53GD3
DSFRAKEGEQKGEEM

SLC20A1

431

Q8WUM9
NGGSSEDMKEKPDAE

SALL4

136

Q9UJQ4
EKMFLDSKEEGTSQA

SLC39A13

166

Q96H72
EQKEDFSGMNGDLEE

DCDC2

361

Q9UHG0
FVKDEEGEMNESAGV

LRRC43

346

Q8N309
SGEGFLDMIDKEQKS

PDCL

166

Q13371
EEMKDEGFSLDTLGA

FOXN4

436

Q96NZ1
MANKANTSGDFEKDD

RGPD4

1011

Q7Z3J3
ASKNEEDAGKMFVGG

HNRNPAB

61

Q99729
NHFEKSMKAEIGDDD

SETX

71

Q7Z333
AKFKEGAEMESSKED

SIL1

136

Q9H173
ESGKKFAMEPEEFDS

PDIA4

481

P13667
DGNKMEEEEGAKGED

RRP12

1161

Q5JTH9
SDGGQIEVEKTMFEK

SPAG17

1041

Q6Q759
TDEFGSKEGMEAKIK

TET1

1716

Q8NFU7
MGETESGDAFLDLKK

EIF4ENIF1

6

Q9NRA8
DFEKFTKGMDDLGSS

AATF

156

Q9NY61
QGEGEEAMKDMDSDQ

AKAP6

36

Q13023
SNKSGSEDEMKEADE

CLGN

576

O14967
EVEAGKENMKFETGA

CNNM4

621

Q6P4Q7
DMEEGKAAFSKDESK

NCAM1

771

P13591
MVEDGQSGDLEKKAD

RREB1

191

Q92766
HFIKGEKGDTDIMSD

RYR3

4266

Q15413
ELSESEEDKGGKMAA

SRRM1

461

Q8IYB3
EEDKGGKMAAADSVQ

SRRM1

466

Q8IYB3
LGSGGEESDKEKQEM

VPS13C

3341

Q709C8
SLEEQSNDGKKDGDM

TP53BP1

466

Q12888
KMDDDEEMKNQCFGG

USP9Y

1911

O00507
EIESLMKDGDKNNDG

TNNC2

131

P02585
MKDGDKNNDGRIDFD

TNNC2

136

P02585
KEEEKFSDSSSAGGM

ZNF648

76

Q5T619
AKESMDDSGKASQEE

ZNF407

671

Q9C0G0
VSAKSEKNMADFDGE

USP34

781

Q70CQ2
MEIKFKGVDNEDDHG

TGFB3

246

P10600
DFKSEQEDMKQTDSG

ZBED4

41

O75132
GLSENGEISKEKFME

LPIN2

476

Q92539
KDNKETFGEMSDGDV

MXRA7

181

P84157