Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionmodification-dependent protein binding

UIMC1 RNF169 ATRX CBX6 UFD1 CHD8 MORC4

2.81e-05206857GO:0140030
GeneOntologyMolecularFunctionhistone binding

UIMC1 ATRX CBX6 PHF14 CHD8 MORC4 UHRF2

1.37e-04265857GO:0042393
GeneOntologyMolecularFunctionhistone reader activity

UIMC1 RNF169 PHF14

1.80e-0426853GO:0140566
GeneOntologyMolecularFunctionubiquitin-modified histone reader activity

UIMC1 RNF169

3.71e-047852GO:0061649
GeneOntologyMolecularFunctionmethylated histone binding

ATRX CBX6 CHD8 MORC4

4.98e-0486854GO:0035064
GeneOntologyMolecularFunctionmethylation-dependent protein binding

ATRX CBX6 CHD8 MORC4

5.43e-0488854GO:0140034
GeneOntologyMolecularFunctionhelicase activity

ATRX ZGRF1 CHD8 SNRNP200 MOV10

5.74e-04158855GO:0004386
GeneOntologyMolecularFunctionchromatin-protein adaptor activity

UIMC1 RNF169 PHF14

7.06e-0441853GO:0140463
GeneOntologyMolecularFunctionATP-dependent activity

ATRX ZGRF1 AFG3L2 ACIN1 CHD8 MORC4 MYO15A SNRNP200 MOV10

1.19e-03614859GO:0140657
GeneOntologyCellularComponentnuclear body

USP36 UIMC1 OTP RNF169 ARRB1 ATRX PRPF3 C11orf54 CBX6 DBF4 WBP4 ACIN1 RDM1 IKZF4 RNF111

2.01e-069038215GO:0016604
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

USP36 UIMC1 EEF2 RNF169 SLX9 ATRX PRPF3 C19orf53 U2SURP WBP4 LARP1 ACIN1 PHF14 CHD8 SNRNP200

1.01e-08954851536373674
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

UIMC1 EEF2 RNF169 ATRX DBF4 BRPF1 TJP2 LARP1 ACIN1 PHF14 OXSR1 SNRNP200 PPL

5.03e-08774851315302935
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

UIMC1 RNF169 SLX9 MIS18BP1 ATRX BRPF1 PHF14 CHD8 UHRF2 ZBTB11 BRWD1

2.82e-07608851136089195
Pubmed

Phosphoproteome analysis of the human mitotic spindle.

USP36 MIS18BP1 NDC80 PRPF3 HMMR SNRNP200 PPL

8.77e-0721085716565220
Pubmed

Nucleolar proteome dynamics.

USP36 EEF2 SLX9 FAU ATRX PRPF3 C19orf53 HSD17B4 SNRNP200

9.01e-0741985915635413
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

UIMC1 EEF2 RNF169 MIS18BP1 ATRX PRPF3 UFD1 ACIN1 PHF14 CHD8 OXSR1 MYO15A UHRF2

1.08e-061014851332416067
Pubmed

Comprehensive identification of phosphorylation sites in postsynaptic density preparations.

EEF2 ATRX MAP2 TJP2 HSD17B4 MAST3 BRWD1

1.66e-0623185716452087
Pubmed

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.

AGO3 PRPF3 U2SURP AFG3L2 ACIN1 RDM1 SNRNP200 BRWD1

2.24e-0634785816033648
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

RNF169 OSBPL8 ARHGEF18 SV2C PHF14 MINAR1 SNRNP200 MOV10 MAST3

3.41e-0649385915368895
Pubmed

Roquin promotes constitutive mRNA decay via a conserved class of stem-loop recognition motifs.

AFG3L2 LARP1 HSD17B4 MOV10

4.59e-064585423663784
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

EEF2 FAU AGO3 U2SURP LARP1 ACIN1 HSD17B4 ZBTB11 SNRNP200 MOV10

4.61e-06655851035819319
Pubmed

mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.

EEF2 AGO3 PRPF3 TJP2 LARP1 ACIN1 MOV10

5.10e-0627485734244482
Pubmed

FBP21's C-Terminal Domain Remains Dynamic When Wrapped around the c-Sec63 Unit of Brr2 Helicase.

WBP4 SNRNP200

5.90e-06285230558886
Pubmed

Processing of the ribosomal ubiquitin-like fusion protein FUBI-eS30/FAU is required for 40S maturation and depends on USP36.

USP36 FAU

5.90e-06285234318747
Pubmed

Cloning and characterization of two K+ inward rectifier (Kir) 1.1 potassium channel homologs from human kidney (Kir1.2 and Kir1.3).

KCNJ10 KCNJ15

5.90e-0628528995301
Pubmed

Regulation of MMP-3 expression and secretion by the chemokine eotaxin-1 in human chondrocytes.

CCL11 MMP3

5.90e-06285222114952
Pubmed

Specific localization of an inwardly rectifying K(+) channel, Kir4.1, at the apical membrane of rat gastric parietal cells; its possible involvement in K(+) recycling for the H(+)-K(+)-pump.

KCNJ10 KCNJ15

5.90e-06285211927671
Pubmed

Clinical Phenotypes of Atopy and Asthma in COPD: A Meta-analysis of SPIROMICS and COPDGene.

CCL11 MMP3

5.90e-06285232450244
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

EEF2 ADAM19 ARRB1 ATRX OSBPL8 ZNF343 NCKAP5 SRGAP2 HSD17B4 ZBTB11 SNRNP200 RNF111 BRWD1

1.40e-051285851335914814
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

USP36 UIMC1 RNF169 SLX9 FAU ATRX PRPF3 C19orf53 U2SURP AFG3L2 ACIN1 PHF14 SNRNP200

1.51e-051294851330804502
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

USP36 UIMC1 RNF169 ARRB1 ATRX C19orf53 AFG3L2 OSBPL8 PHF14 CHD8 SRGAP2 HMMR ZBTB11 MOV10

1.53e-051497851431527615
Pubmed

Kcnj16 (Kir5.1) Gene Ablation Causes Subfertility and Increases the Prevalence of Morphologically Abnormal Spermatozoa.

KCNJ10 KCNJ15

1.77e-05385234205849
Pubmed

Interaction of the Ca2+-sensing receptor with the inwardly rectifying potassium channels Kir4.1 and Kir4.2 results in inhibition of channel function.

KCNJ10 KCNJ15

1.77e-05385217122384
Pubmed

Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.

USP36 RNF169 MIS18BP1 ATRX PRPF3 HSD17B4

1.82e-0522285637071664
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

EEF2 FAU U2SURP AFG3L2 OSBPL8 TJP2 LARP1 ACIN1 CHD8 OXSR1 HSD17B4 SNRNP200 MOV10

1.83e-051318851330463901
Pubmed

Global analysis of TDP-43 interacting proteins reveals strong association with RNA splicing and translation machinery.

EEF2 PRPF3 U2SURP LARP1 SNRNP200 MOV10

1.86e-0522385620020773
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

ATRX WBP4 AFG3L2 ACIN1 PHF14 CHD8 MORC4 MOV10

2.00e-0546985827634302
Pubmed

MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.

RNF169 SLX9 MIS18BP1 PRPF3 UFD1 CHD8 SNRNP200

2.02e-0533985730415952
Pubmed

A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.

USP36 UIMC1 SLX9 OSBPL8 CHD8 HMMR FCHO2 HSD17B4

2.09e-0547285838943005
Pubmed

Binding of USP4 to cortactin enhances cell migration in HCT116 human colon cancer cells.

EEF2 PRPF3 LARP1 ACIN1 SNRNP200

2.24e-0513785537039823
Pubmed

PINK1 Content in Mitochondria is Regulated by ER-Associated Degradation.

USP36 EEF2 U2SURP TERB1 LARP1 ACIN1 SNRNP200 MOV10

2.26e-0547785831300519
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

USP36 EEF2 SLX9 FAU MIS18BP1 PRPF3 U2SURP UFD1 AFG3L2 ACIN1 CHD8 SNRNP200 MOV10

2.41e-051353851329467282
Pubmed

LGALS3BP regulates centriole biogenesis and centrosome hypertrophy in cancer cells.

CCDC8 FAU PRPF3 UFD1 LARP1 DGKH SRGAP2 SNRNP200 MOV10

2.68e-0563985923443559
Pubmed

Genetic Hearing Loss Overview

KCNJ10 TJP2 POU3F4 MYO15A

2.69e-057085420301607
Pubmed

N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.

PRPF3 TJP2 LARP1 ACIN1 SRGAP2 PGM1 PPL

2.97e-0536085733111431
Pubmed

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.

EEF2 PRPF3 U2SURP WBP4 UFD1 LARP1 OXSR1 HMMR MOV10

3.18e-0565385933742100
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

U2SURP OSBPL8 TJP2 LARP1 ACIN1 CHD8 ZBTB11 SNRNP200 MOV10

3.18e-0565385922586326
Pubmed

TRIM65 regulates microRNA activity by ubiquitination of TNRC6.

CCDC8 AGO3 PRPF3 U2SURP LARP1 ZBTB11 MOV10

3.18e-0536485724778252
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

EEF2 RNF169 SLX9 TJP2 LARP1 ACIN1 CHD8 FCHO2

3.29e-0550385816964243
Pubmed

Molecular basis for ubiquitin/Fubi cross-reactivity in USP16 and USP36.

USP36 FAU

3.53e-05485237443395
Pubmed

Role of Angiotensin II Type 1a Receptor (AT1aR) of Renal Tubules in Regulating Inwardly Rectifying Potassium Channels 4.2 (Kir4.2), Kir4.1, and Epithelial Na+ Channel (ENaC).

KCNJ10 KCNJ15

3.53e-05485237909221
Pubmed

The F-BAR domain of srGAP2 induces membrane protrusions required for neuronal migration and morphogenesis.

MAP2 SRGAP2

3.53e-05485219737524
Pubmed

Overcoming neurite-inhibitory chondroitin sulfate proteoglycans in the astrocyte matrix.

MAP2 MMP3

3.53e-05485223554135
Pubmed

Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.

SLX9 ATRX PRPF3 U2SURP LARP1 MOV10

3.61e-0525185628077445
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

EEF2 SLX9 FAU ARRB1 PRPF3 U2SURP UFD1 AFG3L2 OSBPL8 LARP1 SRGAP2 HSD17B4 SNRNP200

3.83e-051415851328515276
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

FAU PRPF3 BRPF1 U2SURP TJP2 LARP1 ACIN1 HSD17B4 SNRNP200 MOV10

4.19e-05847851035850772
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

EEF2 SLX9 PRPF3 AFG3L2 TJP2 LARP1 ACIN1 HMMR UHRF2 SNRNP200 PPL MOV10

5.44e-051257851236526897
Pubmed

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

USP36 PRPF3 U2SURP ACIN1 PHF14 CHD8

5.53e-0527185632433965
Pubmed

Neuronal pentraxin with chromo domain (NPCD) is a novel class of protein expressed in multiple neuronal domains.

MAP2 CBX6

5.87e-05585215593341
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

EEF2 PRPF3 U2SURP WBP4 TJP2 LARP1 HSD17B4 SNRNP200 MOV10

6.32e-0571485928302793
Pubmed

The cell proliferation antigen Ki-67 organises heterochromatin.

USP36 PRPF3 ACIN1 ARHGEF18 CHD8 SNRNP200 MOV10

6.73e-0541085726949251
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

USP36 AGO3 BRPF1 TJP2 LARP1 SRGAP2 OXSR1 HMMR MOV10

7.03e-0572485936232890
Pubmed

β-arrestin-1 participates in thrombosis and regulates integrin aIIbβ3 signalling without affecting P2Y receptors desensitisation and function.

ARRB1 P2RY12

8.80e-05685222318609
Pubmed

Human RNF169 is a negative regulator of the ubiquitin-dependent response to DNA double-strand breaks.

UIMC1 RNF169

8.80e-05685222492721
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

EEF2 FAU AGO3 LARP1 ACIN1 SNRNP200 MOV10

9.06e-0543085738172120
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

ATRX NDC80 PRPF3 U2SURP ACIN1 CHD8 OXSR1 SNRNP200

9.11e-0558285820467437
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

USP36 UIMC1 ATRX PRPF3 U2SURP AFG3L2 LARP1 ACIN1 SRGAP2 SNRNP200

9.43e-05934851033916271
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

CCDC8 SLX9 PRPF3 LARP1 ACIN1 HMMR ZBTB11 SNRNP200 MOV10

1.01e-0475985935915203
Pubmed

Delineating the HMGB1 and HMGB2 interactome in prostate and ovary epithelial cells and its relationship with cancer.

ATRX TJP2 LARP1 ACIN1 SNRNP200

1.01e-0418885529721183
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

CCDC8 ATRX PRPF3 LARP1 CHD8 ZBTB11 MOV10

1.04e-0444085734244565
Pubmed

Identification of proximal SUMO-dependent interactors using SUMO-ID.

UIMC1 RNF169 PRPF3 LARP1 CHD8 OXSR1 HMMR

1.10e-0444485734795231
Pubmed

Linking functions: an additional role for an intrinsically disordered linker domain in the transcriptional coactivator CBP.

UIMC1 ATRX RNF111

1.12e-043885328680062
Pubmed

Tandem protein interaction modules organize the ubiquitin-dependent response to DNA double-strand breaks.

UIMC1 RNF169

1.23e-04785222742833
Pubmed

Key Aging-Associated Alterations in Primary Microglia Response to Beta-Amyloid Stimulation.

P2RY12 MMP3

1.23e-04785228912710
Pubmed

In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.

EEF2 CCDC8 FAU PRPF3 C19orf53 OSBPL8 LARP1 ZBTB11 SNRNP200 MOV10

1.30e-04971851033306668
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

USP36 EEF2 RNF169 FAU U2SURP UFD1 ACIN1 PHF14 ZBTB11 SNRNP200

1.50e-04989851036424410
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

EEF2 FAU AGO3 PRPF3 U2SURP LARP1 ACIN1 SNRNP200 MOV10

1.59e-0480785922681889
Pubmed

Death by splicing: tumor suppressor RBM5 freezes splice-site pairing.

ACIN1 SNRNP200

1.64e-04885218951082
Pubmed

Lulu2 regulates the circumferential actomyosin tensile system in epithelial cells through p114RhoGEF.

TJP2 ARHGEF18

1.64e-04885222006950
Pubmed

Near-Infrared Luciferase Complementation Assay with Enhanced Bioluminescence for Studying Protein-Protein Interactions and Drug Evaluation Under Physiological Conditions.

LARP1 MOV10

1.64e-04885236135776
Pubmed

Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.

EEF2 AGO3 ATRX CHD8 FCHO2 HSD17B4 MAST3

1.67e-0447585731040226
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

UIMC1 EEF2 ATRX ACIN1 CHD8 SNRNP200

1.68e-0433285632786267
Pubmed

Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes.

PRPF3 U2SURP ACIN1 SNRNP200

1.87e-0411585417332742
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

UIMC1 EEF2 ARRB1 ATRX U2SURP LARP1 ACIN1 PHF14 CEP295 HSD17B4 ZBTB11 PPL

1.97e-041442851235575683
Pubmed

Loss of K-Cl co-transporter KCC3 causes deafness, neurodegeneration and reduced seizure threshold.

MAP2 KCNJ10

2.10e-04985214532115
Pubmed

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.

ATRX PRPF3 U2SURP ACIN1 SNRNP200

2.10e-0422085535785414
Pubmed

CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.

EEF2 FAU AGO3 LARP1 HMMR SNRNP200 MOV10

2.12e-0449485726831064
Pubmed

FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.

MAP2 C19orf53 U2SURP AFG3L2 OSBPL8 TJP2 HMMR

2.20e-0449785736774506
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

OSBPL8 CHD8 MINAR1 CAMTA1 SNRNP200

2.33e-0422585512168954
Pubmed

Charting the landscape of tandem BRCT domain-mediated protein interactions.

UIMC1 DBF4 U2SURP OSBPL8 LARP1 SNRNP200 PGM1 MOV10

2.38e-0467085822990118
Pubmed

The human cytoplasmic dynein interactome reveals novel activators of motility.

MIS18BP1 AGO3 NDC80 BRPF1 TJP2 CEP295 FCHO2 HSD17B4 BRWD1

2.40e-0485385928718761
Pubmed

The Interleukin-2-mTORc1 Kinase Axis Defines the Signaling, Differentiation, and Metabolism of T Helper 1 and Follicular B Helper T Cells.

MIS18BP1 NDC80 P2RY12 ARHGEF18 DGKH

2.43e-0422785526410627
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

EEF2 FAU PRPF3 C19orf53 U2SURP LARP1 SNRNP200 MOV10

2.58e-0467885830209976
Pubmed

Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.

UIMC1 RNF169 FAU LARP1 ACIN1 MAST3

2.63e-0436185630344098
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

ARRB1 ATRX MAP2 PRPF3 C11orf54 LARP1 ARHGEF18 PHF14 DGKH SRGAP2 OXSR1 CAMTA1

2.65e-041489851228611215
Pubmed

The Human Tau Interactome: Binding to the Ribonucleoproteome, and Impaired Binding of the Proline-to-Leucine Mutant at Position 301 (P301L) to Chaperones and the Proteasome.

MAP2 C19orf53 UFD1

2.70e-045185326269332
Pubmed

Large-scale mapping of human protein-protein interactions by mass spectrometry.

ARRB1 ATRX PRPF3 TJP2 LARP1 ACIN1 EXT2 SRGAP2 OXSR1 SNRNP200 MOV10

2.91e-041284851117353931
Pubmed

KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.

PRPF3 U2SURP ACIN1 SNRNP200

2.99e-0413085435545047
Pubmed

The protein interaction landscape of the human CMGC kinase group.

EEF2 CCDC8 RNF169 AFG3L2 TJP2 LARP1 ACIN1 SNRNP200

3.04e-0469585823602568
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

ATRX TJP2 ACIN1 ARHGEF18 CEP295 SRGAP2 FCHO2 CAMTA1 PGM1 BRWD1

3.13e-041084851011544199
Pubmed

A noncanonical PWI domain in the N-terminal helicase-associated region of the spliceosomal Brr2 protein.

PRPF3 SNRNP200

3.20e-041185225849387
Pubmed

CIPP, a novel multivalent PDZ domain protein, selectively interacts with Kir4.0 family members, NMDA receptor subunits, neurexins, and neuroligins.

KCNJ10 KCNJ15

3.20e-04118529647694
Pubmed

Transient microglial absence assists postmigratory cortical neurons in proper differentiation.

MAP2 P2RY12

3.20e-041185232242005
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

ARRB1 ATRX CBX6 ACIN1 CHD8 ZBTB11 SNRNP200

3.36e-0453385730554943
Pubmed

Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.

U2SURP LARP1 ACIN1 SNRNP200 MOV10

3.39e-0424485529884807
Pubmed

Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein-protein interaction network.

EEF2 U2SURP LARP1 SNRNP200

3.54e-0413685426979993
Pubmed

Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.

EEF2 FAU ATRX U2SURP MYO18B SNRNP200 MOV10

3.55e-0453885728524877
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

EEF2 PRPF3 C19orf53 U2SURP LARP1 CHD8 HMMR HSD17B4 UHRF2 SNRNP200

3.59e-041103851034189442
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

FAU PRPF3 C19orf53 U2SURP LARP1 ACIN1 SNRNP200 MOV10

3.60e-0471385829802200
Pubmed

Identification of a USP9X Substrate NFX1-123 by SILAC-Based Quantitative Proteomics.

EEF2 SLX9 LARP1 HSD17B4 SNRNP200 MOV10

3.66e-0438485631059266
InteractionSMC5 interactions

USP36 UIMC1 EEF2 RNF169 SLX9 ATRX PRPF3 C19orf53 U2SURP WBP4 LARP1 ACIN1 PHF14 CHD8 SNRNP200

1.08e-0510008215int:SMC5
InteractionRPS2 interactions

USP36 EEF2 CCDC8 SLX9 FAU ARRB1 PRPF3 CBX6 U2SURP LARP1 ZBTB11 MOV10

1.34e-056578212int:RPS2
InteractionMAGI1 interactions

KCNJ10 TJP2 LARP1 SRGAP2 MOV10 MAST3

3.02e-05147826int:MAGI1
InteractionDDX21 interactions

USP36 CCDC8 FAU PRPF3 CBX6 U2SURP LARP1 ACIN1 UHRF2 SNRNP200 MOV10 MAST3

3.21e-057188212int:DDX21
InteractionCEP350 interactions

USP36 CCDC8 NDC80 CBX6 NCKAP5 MOV10

3.26e-05149826int:CEP350
InteractionRPS19 interactions

USP36 EEF2 CCDC8 SLX9 FAU NDC80 CBX6 U2SURP LARP1 ZBTB11 MOV10

5.42e-056398211int:RPS19
Cytoband5q33.2

LARP1 HMMR

4.00e-04168525q33.2
Cytoband6q22.1

RSPH4A GPRC6A

1.33e-03298526q22.1
Cytoband11q13

FAU ARRB1 FRMD8

1.40e-0311885311q13
CytobandXq21.1

ATRX POU3F4

1.72e-0333852Xq21.1
Cytoband21q22.2

KCNJ15 BRWD1

1.72e-033385221q22.2
Cytoband5q13.3

OTP SV2C

1.94e-03358525q13.3
Cytoband13q14.11

WBP4 DGKH

2.40e-033985213q14.11
Cytoband11q21

C11orf54 CEP295

3.05e-034485211q21
GeneFamilyUPF1 like RNA helicases

ZGRF1 MOV10

6.04e-04116121169
GeneFamilyX-linked mental retardation|RNA helicases

ATRX SNRNP200

6.04e-04116121168
GeneFamilyPotassium voltage-gated channel subfamily J

KCNJ10 KCNJ15

1.30e-0316612276
GeneFamilyRho GTPase activating proteins|F-BAR domain containing

SRGAP2 FCHO2

2.71e-03236121288
GeneFamilyPHD finger proteins

BRPF1 PHF14 UHRF2

3.49e-039061388
GeneFamilyActins|Deafness associated genes

TJP2 POU3F4 MYO15A

6.58e-031136131152
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P5|Hippocampus / BrainAtlas - Mouse McCarroll V32

EEF2 MIS18BP1 NDC80 DBF4 ACIN1 POU3F4

1.27e-0618085644988c34861df359a68376500c42a64fbcc4b431
ToppCellLPS-IL1RA-Endothelial-Endothelial-FOXM1|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MIS18BP1 NDC80 ZGRF1 RDM1 DGKH HMMR

1.27e-06180856334e2b1f6eb7d4ece20b1c7b02107863f913237f
ToppCellLPS_IL1RA-Endothelial-Endothelial-FOXM1|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

MIS18BP1 NDC80 DBF4 ZGRF1 RDM1 HMMR

2.27e-06199856be2276c9a1994579ba1d2998b49bf549c1324d44
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P5-P5_1|Hippocampus / BrainAtlas - Mouse McCarroll V32

OTP MIS18BP1 NDC80 DBF4 HMMR

9.55e-06148855b9d3421c2eb8e748e9508c1cbd1cb4f96e23db5a
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P5-P5_1-Sox4|Hippocampus / BrainAtlas - Mouse McCarroll V32

OTP MIS18BP1 NDC80 DBF4 HMMR

9.55e-061488552a7671dc27afbdf6a92d976c5f2b728bd18dd609
ToppCellLPS-antiTNF-Epithelial_airway-Mes-Epi-like|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NDC80 RDM1 HMMR PPL IKZF4

1.57e-051648554307b002fb41ddfc7ab8a6bca66a60942c250052
ToppCellLPS-antiTNF-Epithelial_airway-Mes-Epi-like-Airway|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NDC80 RDM1 HMMR PPL IKZF4

1.57e-051648551d84aa5b925f502ee9c5fa39714490f613a58028
ToppCelldroplet-Skin-nan-18m-Epithelial-stem_cell_of_epidermis|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 PERM1 CEP295 HMMR

1.62e-0516585596f0d8bc9b13e23f757e6bb98cd7dc061a8a9564
ToppCellDividing_Macrophages-Cryobiopsy_01|World / lung cells shred on cell class, cell subclass, sample id

ATRX NDC80 P2RY12 RDM1 HMMR

1.66e-05166855c503036f3c19ef186e1e62c9643c49dea3827f51
ToppCell356C-Myeloid-Dendritic-cDC1|Dendritic / Donor, Lineage, Cell class and subclass (all cells)

PADI4 CBX6 TJP2 NCKAP5 OXSR1

1.66e-05166855971ee6602a1e751f453f9d823295e63dadce62bf
ToppCellPND07-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 SV2C HMMR

1.76e-05168855a7eb28e15b591997f1aee09501cb20ae18beca08
ToppCellLPS-IL1RA+antiTNF-Endothelial-Endothelial-FOXM1|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MIS18BP1 NDC80 ZGRF1 RDM1 HMMR

1.81e-05169855e0607af8ae8609d43e26ff2a2cab92650bfcd5b7
ToppCellPND28-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 ZGRF1 SRGAP2 HMMR

2.09e-0517485572df66319f6efbd88ecf439013d97409fbf3cb52
ToppCellPND28-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 ZGRF1 SRGAP2 HMMR

2.09e-05174855c6087fd0e036ec7f40f0f8f17d1f6ce13ddb5235
ToppCellPND07-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

NDC80 DBF4 CPZ CCL11 HMMR

2.09e-051748551779e67382cb2644534ffb5b9b8f28d32935f4ea
ToppCellPND03-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-NK-NK_G2M|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 SV2C HMMR

2.14e-05175855ae7e0448ffd11b8908d0f6d99ff737faf5eca4bf
ToppCellPND07-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte-Pericyte_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 PERM1 GPRC6A HMMR

2.26e-051778552b63f0529ef73e0eede9b7ef1f08b0a0426a9c82
ToppCellPND10-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 CPZ CCL11 HMMR

2.26e-051778553e149bff1f1b393a7abe98984e37981c8296f95d
ToppCellPND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_G2M|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 KCNJ10 HMMR MMP3

2.26e-051778554197cf2b1e743230c821f422836fa5991b155a52
ToppCellfacs-Spleen-nan-3m-Lymphocytic|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

EEF2 P2RY12 ARHGEF18 MMP3 BRWD1

2.45e-0518085587fb1fdbc49c808bb5f6fe9fb747057b45fa78d0
ToppCellPBMC-Mild-cDC_9|Mild / Compartment, Disease Groups and Clusters

ADAM19 P2RY12 TJP2 HMMR PPL

2.73e-051848552e0c9a2c40c892a2d435eafb31f1f838de9baf15
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

MIS18BP1 NDC80 ZGRF1 RDM1 HMMR

2.80e-0518585530e041d6f6e310d64809e9d6d93cd30052972f3b
ToppCellfacs-Brain_Non-Myeloid-Striatum-3m-Epithelial|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 DBF4 POU3F4 HMMR

2.95e-051878554d12c70c8ed922fbc8f7b139145611203735cab4
ToppCellfacs-Brain_Non-Myeloid-Striatum-3m-Epithelial-neuronal_stem_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 DBF4 POU3F4 HMMR

2.95e-05187855e46b49b4053d2d0f3e1d2bcdc380f7f8733cbe07
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

MIS18BP1 NDC80 ZGRF1 RDM1 HMMR

2.95e-05187855057569c9437219ecc396aa6e673b1178a2273837
ToppCellfacs-Brain_Non-Myeloid-Striatum-3m-Epithelial-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 DBF4 POU3F4 HMMR

2.95e-05187855e851ee46a6b4068a7bd7602ee183c0ace50ee4dd
ToppCellControl-Endothelial-Endothelial-FOXM1|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MIS18BP1 NDC80 DBF4 ZGRF1 HMMR

3.10e-051898551e1499b062d9c647c8f38b0c4e0d871d159be5dd
ToppCellpdx-Tumor_cells-T1|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

MIS18BP1 NDC80 ZGRF1 CEP295 HMMR

3.18e-05190855d06ee5f89f1cec8db6897fe3b2a890a07cd3697b
ToppCelldroplet-Lung-LUNG-30m-Lymphocytic-Proliferating_T|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 ADAM19 NDC80 DBF4 HMMR

3.26e-05191855239300ff76f2c855b2b04d3002461158be90a01b
ToppCellEndothelial-Endothelial-D_(cycle)|Endothelial / shred on cell class and cell subclass (v4)

MIS18BP1 NDC80 DBF4 CEP295 HMMR

3.26e-05191855a3c5a913a99f17633c140ec9ece81b73e59e0715
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating2_(11)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.34e-0519285527723f4e320e49d4a3daafa2d8d3946ff79fab64
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating2_(11)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.34e-051928550a54c79dcfdeb99e3b512d42b22359618cfd17e9
ToppCellsevere-Myeloid-Neutrophils_3|Myeloid / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

PADI4 ADAM19 KCNJ15 OSBPL8 MAST3

3.42e-05193855f4d43dfbf4115dd0f843ea5cf08049220342a047
ToppCellhuman_hepatoblastoma-Tumor_cells-T1|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

MIS18BP1 NDC80 ZGRF1 CEP295 HMMR

3.42e-051938554b9fa2a4424f8abe63fa7bee78db93dda04ab15f
ToppCelldroplet-Tongue-nan-3m-Epithelial-proliferating|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.51e-051948552cac1b9c4da01faaec9a67ec06f47a7060760225
ToppCelldroplet-Thymus-nan-3m-Lymphocytic-DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.78e-051978559b2c67de46bd59bf56c81a0d10b84cf4a041c120
ToppCellPND07-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 CEP295 HMMR

3.78e-051978551c89d6836eed30c50c765f7dde9cc8ee15c363d2
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Proliferating-cycling_dorsal_progenitors|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.87e-051988555f0964c3aa7e1dc52cbb46e754078920b65bcb88
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-Proliferating|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.87e-05198855629d674a9c9108c1acb3f7af57bbdbf34bb0528e
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Proliferating-cycling_dorsal_progenitors|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 STXBP6 DBF4 HMMR

3.87e-05198855dada1c19a261c8e1090957cd7e37f2a43a9fe14f
ToppCell(0)_NK_Dividing|World / Lung cell shreds - cell class (v4) and cell subclass (v4)

ATRX NDC80 ZGRF1 RDM1 HMMR

3.87e-051988555ebb4965b723302152b42bfaf48bb77a57dd02c5
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Proliferating-Cycling_Progenitors|6_mon / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.96e-05199855a99516a5760f49a69b0fe45a9b2316e393252966
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Proliferating-cycling_dorsal_progenitors|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.96e-05199855ca17e8c0f5bc2c41ce28351a7418d934404e563b
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Proliferating-cycling_ventral_progenitors|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.96e-05199855446cd7d960812519fe2b8e434578ef0b668c75ce
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Proliferating|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

3.96e-05199855d8f904f531bfe091b7d8caaa147ea4a03d627995
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Stem_cells-Neuroepithelial_cell|10w / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

4.06e-052008558f8b8c225cdc79baf16fe04be89bdb65e404a055
ToppCellLPS_IL1RA_TNF-Endothelial-Endothelial-FOXM1|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

MIS18BP1 NDC80 ZGRF1 RDM1 HMMR

4.06e-052008554cfe08878a6981bf7b3567f9e82192d8f060ddde
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Stem_cells|10w / Sample Type, Dataset, Time_group, and Cell type.

MIS18BP1 NDC80 DBF4 RDM1 HMMR

4.06e-05200855a1f48eca9efb4f3ec3c9ace20f8c9257dd72c4ed
ToppCellStriatum-Macroglia-POLYDENDROCYTE-P5-P5_1-Sox4-POLYDENDROCYTE_(Rostral-�migratory_stream-�(RMS)_(Tuba1c))|Striatum / BrainAtlas - Mouse McCarroll V32

MIS18BP1 CERS3 HMMR MYO18B

4.21e-051018540b32e6071f05dbe808e51e18c3a3f8221f438f83
ToppCellprimary_visual_cortex-Non-neuronal-oligodendrocyte-Oligo-OPC_Pdgfra_Ccnb1|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

MIS18BP1 NDC80 NCKAP5 HMMR

1.09e-04129854ff74d159034a09f7b174da18bfb9a26936252b4c
ToppCellFrontal_cortex-Macroglia-POLYDENDROCYTE-P4-Tnr|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

MIS18BP1 NDC80 CNPY1 HMMR

1.58e-041428547bd05d0c0ac2dee0e6cc0f3c531f9154bf300c75
ToppCellFrontal_cortex-Macroglia-POLYDENDROCYTE-P4|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

MIS18BP1 NDC80 CNPY1 HMMR

1.58e-04142854328d08ba2712cd42bb9846ac4d7453ae165b75e2
ToppCellFrontal_cortex-Macroglia-POLYDENDROCYTE-P4-Tnr-Polydendrocyte.Tnr.Dlx1_(Dlx1)-|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

MIS18BP1 NDC80 CNPY1 HMMR

1.58e-0414285494774d3e598d074f48146b0b094705dc48af5a1f
ToppCellFrontal_cortex-Macroglia-POLYDENDROCYTE-P4-Tnr-Polydendrocyte.Tnr.Dlx1_(Dlx1)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

MIS18BP1 NDC80 CNPY1 HMMR

1.58e-0414285492bf826827b3e3387ad326566556fc90c5c2f4d5
ToppCellE16.5-samps-Mesenchymal-Matrix_fibroblast-_fetal-matrix_-_immature_3|E16.5-samps / Age Group, Lineage, Cell class and subclass

NDC80 CCL11 HMMR UHRF2

1.90e-04149854651494e84be03dc7b061ebdfa91756a1c507b9b4
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Degenerative_Outer_Medullary_Collecting_Duct_Principal_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

EEF2 NDC80 SV2C MORC4

2.00e-041518543744e4ed87703a97002e001afd16490d525a5128
ToppCellPBMC-Mild-cDC_3|Mild / Compartment, Disease Groups and Clusters

P2RY12 SLC38A4 KCNJ10 RDM1

2.38e-041588545fefab4831687cd8dd45f5cc84f681398069c3be
ToppCellLPS-antiTNF-Endothelial-Endothelial-FOXM1|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MIS18BP1 NDC80 ZGRF1 HMMR

2.68e-041638545285318c52aa31c9b22dc2ffff078e32e408604d
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

OTP NDC80 ZGRF1 HMMR

2.68e-041638543f434015c0cbefb31eeda133c34f75384c5f7e22
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-NK-NK_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

2.74e-04164854ae09e5aabd1347b865474255e7411c04f63efb3b
ToppCell356C-Myeloid-Dendritic-cDC1|356C / Donor, Lineage, Cell class and subclass (all cells)

ADAM19 CBX6 NCKAP5 OXSR1

2.87e-041668540590e404f45afce90e20f93f90a3def83949c66b
ToppCellPND14-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-Treg-Treg_G2M|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

2.93e-04167854d21635df8b74189e3309eaf435af381fbe412574
ToppCellPND14-Immune-Immune_Myeloid-DC-cDC2-cDC2_G2M|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.00e-04168854b7cd33f5da4f37b9384fc3bd3ca01fbc790accfc
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

NDC80 DBF4 CEP295 HMMR

3.07e-04169854b253a4a50c06d36228fcd5d856c57202cbac158f
ToppCellPND03-Immune-Immune_Myeloid-Monocytic-Macrophage-IM-IM_G2M|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 P2RY12 HMMR

3.07e-04169854a1efc20e34a81ae32f8d278a5486811ade03ef24
ToppCellPND03-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_G2M|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.07e-041698544db49b7eaea34e6558ee73b01e76315e99cc880b
ToppCellControl-T/NK_proliferative|World / Disease group and Cell class

NDC80 DBF4 SAXO2 HMMR

3.07e-04169854fca735cbb55fce4d32dc6632a39acea1d16b87ab
ToppCellPND03-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_G2M|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.14e-041708542d5e56eee0c3ce75a9641cc14dee0e0807141c32
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD8_T-CD8_T_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.14e-04170854a0d6466e00bd3dc07f644ba3f87d5b421fd479d5
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.14e-041708546b91d4cbe0697b65bfb2e099e7a9b39ea2fba3a9
ToppCellE18.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-PMP-PMP_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MAP2 SLC38A4 ZGRF1 MAST3

3.14e-04170854b1a16600754e0c12f7d39c9221f1b03135833f16
ToppCell10x5'-Lung-Lymphocytic_T_CD4/8-lo-Cycling_T|Lung / Manually curated celltypes from each tissue

NDC80 ZGRF1 RDM1 HMMR

3.21e-04171854976361f67dd725870e0513ae7a92f2dcaee17148
ToppCellPND07-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_G2M|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 DBF4 KCNJ10 HMMR

3.21e-04171854845f312f8cbe29d820da25f0e6d75deb382bbfd8
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast-|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

SYNPO2 MAP2 ZGRF1 MINAR1

3.21e-04171854b0373ed8283ee1792b6a490bff93906546978593
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

SYNPO2 MAP2 ZGRF1 MINAR1

3.21e-04171854b92963f9f247d2e5e2e6c51c6dbf70e527cd2f55
ToppCellE18.5-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-Sox9_Epi-Sox9_Epi_G2M|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.21e-04171854621f9da0bfa09c86fc89fd26919403e94cd56d2b
ToppCellE18.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-PMP-PMP_G2M|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.28e-04172854c06ca5d075937747952ed915c9db39a9f62072f9
ToppCellfacs-Brain_Non-Myeloid-Striatum_-18m-Epithelial-neuronal_stem_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 DBF4 HMMR

3.28e-0417285435c20de4db47dbf31c857d23c7a25cd7f95c085c
ToppCelldroplet-Lung-nan-18m-Lymphocytic-Proliferating_NK|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 NDC80 DBF4 HMMR

3.28e-04172854e495efd25aec60b97ac2b5aa861651bd73174a17
ToppCellASK454-Epithelial-Transformed_epithelium|ASK454 / Donor, Lineage and Cell class of Lung cells from Dropseq

RNF169 SYNPO2 SWT1 MYO15A

3.28e-041728543986f0f098ef5e096c8d9ee3d335b8404083701f
ToppCell10x5'-bone_marrow-Lymphocytic_NK-Cycling_NK|bone_marrow / Manually curated celltypes from each tissue

NDC80 ZGRF1 RDM1 HMMR

3.35e-041738548a9dd85f718564c07cf3120ad648daeb60c94fc5
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Epithelial-neuronal_stem_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MIS18BP1 DBF4 POU3F4 HMMR

3.35e-04173854f38bf7584e08d15a6e2c116b7c3551ba475a5e14
ToppCellBAL-Control-Lymphocyte-T/NK-Other_T|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

NDC80 DBF4 RDM1 HMMR

3.43e-0417485494575a605c725de83f66a6cf7df9d7bb360ffc56
ToppCellBAL-Control-Lymphocyte-T/NK-Other_T-T/NK_proliferative|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

NDC80 DBF4 RDM1 HMMR

3.43e-0417485440c81ab36d7931e271e20d7d56fed32463c75f41
ToppCellPND03-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_G2M|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.43e-0417485465147b0f8c2ccadd5685430d31081520c157536a
ToppCellBAL-Control-Myeloid-cDC-cDC-cDC_11|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PADI4 ADAM19 CBX6 NCKAP5

3.43e-04174854991f7eab69ea3ee1045a4e44ce60a96db13df6d1
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

MIS18BP1 NDC80 RDM1 HMMR

3.43e-04174854dbb4e1a6c3319ce40f81bfd2d1745a88a2cc412e
ToppCellBAL-Control-Lymphocyte-T/NK-Other_T-T/NK_proliferative-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

NDC80 DBF4 RDM1 HMMR

3.43e-04174854b43fb0fbb492c1be6e791a1c4d6c4e5956955ee4
ToppCellBAL-Control-Myeloid-cDC-cDC-cDC_11|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

PADI4 ADAM19 CBX6 NCKAP5

3.43e-04174854c8cec89369cf3896c5626e447051e76a142cb6df
ToppCell10x_5'_v1-Neoplastic-Stem-like-OPC-like|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

MAP2 P2RY12 TJP2 HMMR

3.50e-04175854cc596907ea1a64ab7b5a8c7d4ad12e6ee59bfed9
ToppCell10x_5'_v1-Neoplastic-Stem-like|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

MAP2 P2RY12 TJP2 HMMR

3.50e-04175854a8400e7e47379901dcab5f2e364c3ff17765b4b9
ToppCell10x_5'_v1-Neoplastic-Stem-like-OPC-like-OPC-like|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

MAP2 P2RY12 TJP2 HMMR

3.50e-041758548a3abf40146ae3459d97cdf865c1c8f6b92ac639
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling-Cycling_Distal_Convoluted_Tubule_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

NDC80 DBF4 ZGRF1 HMMR

3.50e-04175854876cea684faf42ff3eb4623ad6d7a1fb1276ee02
ToppCellPND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-Treg-Treg_G2M|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.50e-041758549de288c338cee67be0e9b836c87799bbc1db1c38
ToppCell10x_5'_v1-Neoplastic-Stem-like-OPC-like-OPC-like-Z|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

MAP2 P2RY12 TJP2 HMMR

3.50e-04175854378d2b79edac91fc74eee0fb42bb29dd9b07c36f
ToppCelldroplet-Lung-18m-Hematologic-Lymphocytic_NK_ILC-natural_killer_cell-proliferating_NK|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

MIS18BP1 NDC80 DBF4 HMMR

3.58e-04176854b17317ac41d3215db55a38cbd3366c0947f7a2a3
ToppCellPND01-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.58e-041768548385435074cc5235b7af7424974f609388fc2cff
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.82e-0417985454191c00b29f53b520cd3243b5791daa4a2c72d7
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

MIS18BP1 NDC80 DBF4 HMMR

3.90e-041808545e1680088065be14447d5d5465f91f7edd071a1e
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

NDC80 DBF4 ZGRF1 HMMR

3.90e-04180854401df9cddcbca1eb8f0d2687bcacd98e95dc1493
Diseasecerebellum white matter volume change measurement, age at assessment

FAU TJP2 DGKH

2.28e-0520823EFO_0008007, EFO_0021498
Diseasehearing impairment

TJP2 POU3F4 HSD17B4 MYO15A

1.64e-0498824C1384666
Diseaseretinitis pigmentosa (is_implicated_in)

PRPF3 ARHGEF18 SNRNP200

2.04e-0441823DOID:10584 (is_implicated_in)
Diseaselung small cell carcinoma (is_marker_for)

EEF2 ATRX

8.93e-0416822DOID:5409 (is_marker_for)
DiseaseNonsyndromic genetic hearing loss

KCNJ10 POU3F4 MYO15A

1.26e-0376823cv:C5680182
DiseaseNonsyndromic Deafness

TJP2 POU3F4 MYO15A

1.51e-0381823C3711374

Protein segments in the cluster

PeptideGeneStartEntry
KKFKITRGETQPGVT

nan

136

Q6ZS92
KRKISVVSATKGVPA

ACIN1

821

Q9UKV3
TGVVRPVAKTRAKAK

BHLHB9

31

Q6PI77
KCVKTSRFFPSVVRK

SLC4A9

646

Q96Q91
RSRVTRQKEKGKSPA

ARHGEF18

266

Q6ZSZ5
ITPVVGKKRKRNTSS

CHD8

536

Q9HCK8
SSREKRNGKVAKPVL

CAMTA1

321

Q9Y6Y1
KVPSRNRVIGKSKKF

CBX6

201

O95503
VNKRFVRVTFTPGKT

AFG3L2

191

Q9Y4W6
KVSPREALKVKAGTR

ADAM19

901

Q9H013
ASAVEGIKPRKRKTF

FCHO2

276

Q0JRZ9
GKDRPFKVSIKFVSR

AGO3

116

Q9H9G7
GAQKTRTGRLKKPFV

DBF4

206

Q9UBU7
TRVFKKASPNGKLTV

ARRB1

6

P49407
KPGTSGLRKRVKVFQ

PGM1

16

P36871
DITRNKVRKTFVGTP

OXSR1

176

O95747
RLGKKPIFSSSQQRK

KIAA1107

21

Q9UPP5
FQKSPVKVRLGTRHK

RDM1

86

Q8NG50
ITRTGKVKPTRAVKD

PADI4

121

Q9UM07
AKVVRAAVPKQRKGS

LARP1

151

Q6PKG0
RVVRVEQKTTKKPFA

PSKH2

76

Q96QS6
RPSVKETLQKSGVRK

MIS18BP1

836

Q6P0N0
ITGTFLAKIARPKKR

KCNJ10

161

P78508
RDRTPKISKKGQFRS

MYO15A

41

Q9UKN7
GKGIRRVKPKRTTSF

FRMD8

426

Q9BZ67
FVRRKDSGPVVKKIR

MMP3

51

P08254
KGGRVIAPKKARVVQ

C19orf53

31

Q9UNZ5
RKRNKGKYSPTVQTR

PPL

6

O60437
TGTFLAKIARPKKRA

KCNJ15

161

Q99712
KVPSVKKGYSSRRVQ

MIGA2

96

Q7L4E1
PVVYGVKTKQIRKRV

OR52P1

291

Q8NH57
VRTRGVGKVPRKKVN

P2RY12

221

Q9H244
NNRSTVFRIVPKFKK

DGKH

1121

Q86XP1
PTVVKRKGRSASQKE

PHF14

216

O94880
GTKRSRRQIKEPVKF

PHF14

796

O94880
PTSIDKIAAQGRKRK

POU3F4

266

P49335
NVKKIGKVVGFAFRR

GPRC6A

316

Q5T6X5
EAQSVKPSTRRKKGI

OSBPL8

811

Q9BZF1
VLKGPVSFQKSQRFK

HMMR

31

O75330
IGAARTTKKRIPNTK

ATRX

831

P46100
KSFGIKETVRKVTPN

CERS3

66

Q8IU89
TDKFGKPVKNARISV

CPZ

511

Q66K79
GKRTSDKVKVAVAIP

HSD17B4

471

P51659
VARKKIRVNVVAPGF

CBR4

166

Q8N4T8
VTKERTFKRFAPRKG

CNPY1

11

Q3B7I2
TKGKAKVVRKEFVPR

BRWD1

2181

Q9NSI6
SIKVGPARKNVAKGR

MAST3

1041

O60307
PSQVVAETRKRKGLK

EEF2

831

P13639
APGARARKQVKTVRF

CCDC8

466

Q9H0W5
ARKQVKTVRFQTPGR

CCDC8

471

Q9H0W5
VSRLKGVNKVRASFP

CEP295

2526

Q9C0D2
TQVPRKKKVRFSVAG

PERM1

496

Q5SV97
TKRKRSTPQKFVGEK

IKZF4

321

Q9H2S9
ISKESSGVKKRRIPR

PRPF3

101

O43395
KRKKTTNVFRAPGTL

OTP

161

Q5XKR4
PTGRQKVRKKEASFE

MINAR1

106

Q9UPX6
QIVIARKIKKFFTGR

RSPH4A

451

Q5TD94
RGQPEKVFTVNKIKT

SV2C

371

Q496J9
PKTFSFIKQQRVVKR

NCKAP5

646

O14513
KKGKARLSPRSVGVI

MOV10

816

Q9HCE1
IKSFEKVGCQVKPTR

MORC4

341

Q8TE76
AKSRVRAVPGNKAKV

RNF169

301

Q8NCN4
LVKKETFRSPQKVGA

SLC38A4

501

Q969I6
GSRRQKISFKIPIKS

SWT1

226

Q5T5J6
KVKTFVRGGVVNAAK

U2SURP

131

O15042
VGRRTSVLFSKKNPK

BRPF1

886

P55201
RITSGKCPQKAVIFK

CCL11

51

P51671
QPGKVIEVKAKRRTG

C11orf54

166

Q9H0W9
PVRVIRSFKGRKISK

UHRF2

561

Q96PU4
GAVQVKRRTKKKIPF

STXBP6

21

Q8NFX7
KKEGKAQIVVPVTFR

ZNF343

51

Q6P1L6
VFVDTKGVVKRSSPK

ZBTB11

181

O95625
RKSGKVAAIVVKRPR

TJP2

106

Q9UDY2
RPKFSAKKSGVTIQV

SYNPO2

1071

Q9UMS6
VRKKRKSQQAGPSYV

RNF111

91

Q6ZNA4
KQRKRPESGSIRKTF

SRGAP2

836

O75044
ANVTGKAVIKVTPRK

EXT2

636

Q93063
GVAPVFKKRRTENGK

WBP4

351

O75554
SIRRGAEAKTVLPKK

SLX9

91

Q9NSI2
IKPRQSFKPSSVVKR

SAXO2

126

Q658L1
RKEKPFKTGRGRIST

MAP2

1426

P11137
TPTKKTVPFKRGVRR

MYO18B

136

Q8IUG5
KKPVIVFVPSRKQTR

SNRNP200

1556

O75643
GKITFIRNSRPLVKK

UFD1

266

Q92890
IVSNKRVSKRKFIPP

ZGRF1

1571

Q86YA3
ARAGKVRGQTPKVAK

FAU

81

P62861
TPGGIKKRRIRKNFT

TERB1

661

Q8NA31
KKQVTVQPGSRTRTK

UIMC1

696

Q96RL1
KRKKTFVGEPQRLGS

USP36

811

Q9P275
NKPTSERKVSLFGKR

NDC80

46

O14777