Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionG protein-coupled receptor kinase activity

GRK7 GRK6

7.36e-057382GO:0004703
GeneOntologyMolecularFunctionE-box binding

NEUROD1 NEUROD2 NEUROD4

2.12e-0461383GO:0070888
DomainNeurogenic_DUF

NEUROD1 NEUROD2 NEUROD4

2.86e-084373IPR022575
DomainNeuro_bHLH

NEUROD1 NEUROD2 NEUROD4

2.86e-084373PF12533
DomainTF_bHLH_NeuroD

NEUROD1 NEUROD2 NEUROD4

2.86e-084373IPR016637
DomainGPCR_kinase

GRK7 GRK6

7.97e-057372IPR000239
Domain-

CHD3 BBX SSRP1

1.75e-04553731.10.30.10
DomainHMG_box_dom

CHD3 BBX SSRP1

2.87e-0465373IPR009071
DomainChromo_domain

CHD9 CHD3

1.03e-0324372IPR023780
DomainChromo

CHD9 CHD3

1.20e-0326372PF00385
DomainP-loop_NTPase

CHD9 GUF1 CHD3 MYO15A DDX27 KIF3A IQGAP1

1.21e-03848377IPR027417
DomainHelicase_C

CHD9 CHD3 DDX27

1.23e-03107373PF00271
DomainHELICc

CHD9 CHD3 DDX27

1.23e-03107373SM00490
DomainHelicase_C

CHD9 CHD3 DDX27

1.27e-03108373IPR001650
Domain-

NEUROD1 NEUROD2 NEUROD4

1.30e-031093734.10.280.10
DomainHELICASE_CTER

CHD9 CHD3 DDX27

1.30e-03109373PS51194
DomainHELICASE_ATP_BIND_1

CHD9 CHD3 DDX27

1.30e-03109373PS51192
DomainDEXDc

CHD9 CHD3 DDX27

1.30e-03109373SM00487
DomainHelicase_ATP-bd

CHD9 CHD3 DDX27

1.33e-03110373IPR014001
DomainHLH

NEUROD1 NEUROD2 NEUROD4

1.37e-03111373PF00010
DomainCHROMO_2

CHD9 CHD3

1.40e-0328372PS50013
DomainCHROMO_1

CHD9 CHD3

1.40e-0328372PS00598
DomainHLH

NEUROD1 NEUROD2 NEUROD4

1.56e-03116373SM00353
DomainBHLH

NEUROD1 NEUROD2 NEUROD4

1.59e-03117373PS50888
DomainbHLH_dom

NEUROD1 NEUROD2 NEUROD4

1.63e-03118373IPR011598
DomainSNF2_N

CHD9 CHD3

1.82e-0332372PF00176
DomainSNF2_N

CHD9 CHD3

1.82e-0332372IPR000330
DomainChromodomain-like

CHD9 CHD3

1.82e-0332372IPR016197
DomainCHROMO

CHD9 CHD3

1.94e-0333372SM00298
DomainChromo/shadow_dom

CHD9 CHD3

1.94e-0333372IPR000953
DomainRGS

GRK7 GRK6

2.18e-0335372PF00615
DomainRGS

GRK7 GRK6

2.18e-0335372SM00315
DomainRGS

GRK7 GRK6

2.31e-0336372PS50132
DomainRGS

GRK7 GRK6

2.70e-0339372IPR016137
DomainHMG_box

BBX SSRP1

4.94e-0353372PF00505
DomainHMG_BOX_2

BBX SSRP1

5.12e-0354372PS50118
DomainHMG

BBX SSRP1

5.12e-0354372SM00398
DomainAGC-kinase_C

GRK7 GRK6

5.50e-0356372IPR000961
DomainAGC_KINASE_CTER

GRK7 GRK6

5.50e-0356372PS51285
DomainS_TK_X

GRK7 GRK6

5.50e-0356372SM00133
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

ACSL4 LIG4 WBP11 CHD3 BBX SSRP1 KDM5A EFCAB12 GRK6 FER1L6 IQGAP1 KNOP1

2.45e-081442381235575683
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

WDR3 GUF1 PARN GIPC2 BBX SSRP1 KDM5A DDX27 IQGAP1 NOL8 KNOP1

3.72e-071497381131527615
Pubmed

Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression.

CHD3 BBX KDM5A DDX27

4.27e-075638426919559
Pubmed

Basic helix-loop-helix transcription factors cooperate to specify a cortical projection neuron identity.

NEUROD1 NEUROD2 NEUROD4

4.34e-071438318160702
Pubmed

The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing.

WDR3 PARN ZCCHC17 SSRP1 DDX27 NOL8 KNOP1

8.30e-0748338736912080
Pubmed

Expression of neurogenin3 reveals an islet cell precursor population in the pancreas.

NEUROD1 NEUROD2 NEUROD4

9.71e-071838310903178
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

WDR3 NUCKS1 CHD9 WBP11 PARN CHD3 SSRP1 MYO15A IQGAP1

1.12e-06101438932416067
Pubmed

The proneural genes NEUROD1 and NEUROD2 are expressed during human trophoblast invasion.

NEUROD1 NEUROD2

1.16e-06238211900979
Pubmed

NeuroD2 controls inhibitory circuit formation in the molecular layer of the cerebellum.

NEUROD1 NEUROD2

1.16e-06238230723302
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

WDR3 ZCCHC17 CHD3 SSRP1 DDX27 IQGAP1 NOL8 KNOP1

1.36e-0675938835915203
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

WDR3 ACSL4 WBP11 ZCCHC17 CHD3 SSRP1 KDM5A DDX27 IQGAP1 KNOP1

1.51e-061371381036244648
Pubmed

Neuronal death resulting from targeted disruption of the Snf2 protein ATRX is mediated by p53.

NEUROD1 NEUROD2 NEUROD4

1.83e-062238319020049
Pubmed

Induction of pancreatic islet cell differentiation by the neurogenin-neuroD cascade.

NEUROD1 NEUROD2

3.48e-06338217924961
Pubmed

NeuroD1 is an upstream regulator of NSCL1.

NEUROD1 NEUROD2

3.48e-06338222310718
Pubmed

NeuroD2 and neuroD3: distinct expression patterns and transcriptional activation potentials within the neuroD gene family.

NEUROD1 NEUROD2

3.48e-0633828816493
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

WDR3 WBP11 CHD3 SSRP1 DDX27 IQGAP1 KNOP1

3.68e-0660538728977666
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

CHD9 CHD3 BBX DOT1L SSRP1 KDM5A KNOP1

3.80e-0660838736089195
Pubmed

Nucleolar proteome dynamics.

WDR3 WBP11 PARN CHD3 SSRP1 DDX27

5.88e-0641938615635413
Pubmed

Genetic mapping of four mouse bHLH genes related to Drosophila proneural gene atonal.

NEUROD2 NEUROD4

6.96e-0643828938455
Pubmed

The Growth arrest specific 1 (Gas1) gene is transcriptionally regulated by NeuroD1 via two distal E-boxes.

NEUROD1 NEUROD2

6.96e-06438229395133
Pubmed

NeuroD factors regulate cell fate and neurite stratification in the developing retina.

NEUROD1 NEUROD2

6.96e-06438221593321
Pubmed

Requirement of multiple basic helix-loop-helix genes for retinal neuronal subtype specification.

NEUROD1 NEUROD4

6.96e-06438215105417
Pubmed

Regulation of neuroD2 expression in mouse brain.

NEUROD1 NEUROD2

6.96e-06438214697366
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

WDR3 WBP11 PARN CHD3 BBX SSRP1 NOL8 KNOP1

7.33e-0695438836373674
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

WDR3 CHD9 GUF1 WBP11 NEUROD2 KDM5A DDX27 KIF3A IQGAP1

7.72e-06128538935914814
Pubmed

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

WDR3 CHD3 SSRP1 NOL8 KNOP1

1.13e-0527138532433965
Pubmed

neurogenins, a novel family of atonal-related bHLH transcription factors, are putative mammalian neuronal determination genes that reveal progenitor cell heterogeneity in the developing CNS and PNS.

NEUROD1 NEUROD4

1.74e-0563829000438
Pubmed

BETA2/NeuroD1 null mice: a new model for transcription factor-dependent photoreceptor degeneration.

NEUROD1 KIF3A

1.74e-05638212533605
Pubmed

Math3 and NeuroD regulate amacrine cell fate specification in the retina.

NEUROD1 NEUROD4

1.74e-05638211861467
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

NUCKS1 CHD9 WBP11 ZCCHC17 BBX SSRP1 KDM5A KNOP1

1.82e-05108238838697112
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

NUCKS1 WBP11 NOL8 KNOP1

2.08e-0514838432538781
Pubmed

The chromatin-targeting protein Brd2 is required for neural tube closure and embryogenesis.

NEUROD1 NEUROD4

2.43e-05738219362612
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

WDR3 CHD3 DOT1L SSRP1 DDX27 NOL8 KNOP1

3.24e-0584738735850772
Pubmed

The zinc finger transcription factor RP58 negatively regulates Rnd2 for the control of neuronal migration during cerebral cortical development.

NEUROD1 NEUROD2

3.24e-05838224084125
Pubmed

Dual requirement for Pax6 in retinal progenitor cells.

NEUROD1 NEUROD4

3.24e-05838219004853
Pubmed

neurogenin1 is essential for the determination of neuronal precursors for proximal cranial sensory ganglia.

NEUROD1 NEUROD4

4.16e-0593829539122
Pubmed

Survival of a Novel Subset of Midbrain Dopaminergic Neurons Projecting to the Lateral Septum Is Dependent on NeuroD Proteins.

NEUROD1 NEUROD2

4.16e-05938228130357
Pubmed

Left-right asymmetry and kinesin superfamily protein KIF3A: new insights in determination of laterality and mesoderm induction by kif3A-/- mice analysis.

DNAI3 KIF3A

4.16e-05938210330409
Pubmed

Ptf1a determines horizontal and amacrine cell fates during mouse retinal development.

NEUROD1 NEUROD4

4.16e-05938217075007
Pubmed

Ldb1- and Rnf12-dependent regulation of Lhx2 controls the relative balance between neurogenesis and gliogenesis in the retina.

NEUROD1 NEUROD4

4.16e-05938229650591
Pubmed

Mouse screen reveals multiple new genes underlying mouse and human hearing loss.

STK32A WDR3 ACSL4 CHD9 BBX DOT1L MYO15A DDX27

4.87e-05124238830973865
Pubmed

Physical map of 17p13 and the genes adjacent to p53.

CHD3 NEUROD2

5.20e-051038210662545
Pubmed

Myf5 is a novel early axonal marker in the mouse brain and is subjected to post-transcriptional regulation in neurons.

NEUROD1 NEUROD4

5.20e-051038210603349
Pubmed

Noggin and chordin have distinct activities in promoting lineage commitment of mouse embryonic stem (ES) cells.

NEUROD1 NEUROD2

6.35e-051138211969257
Pubmed

Mammalian achaete-scute and atonal homologs regulate neuronal versus glial fate determination in the central nervous system.

NEUROD1 NEUROD4

6.35e-051138211032813
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

WDR3 CHD3 BBX SSRP1 HOXD9 KDM5A NOL8 KNOP1

6.49e-05129438830804502
Pubmed

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

CHD9 PARN CHD3 SSRP1 DDX27

6.71e-0539438527248496
Pubmed

The cell proliferation antigen Ki-67 organises heterochromatin.

WDR3 CHD3 BBX DDX27 KNOP1

8.10e-0541038526949251
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

WDR3 WBP11 PARN SSRP1 DDX27 IQGAP1 NOL8

8.60e-0598938736424410
Pubmed

The bHLH protein NEUROGENIN 2 is a determination factor for epibranchial placode-derived sensory neurons.

NEUROD1 NEUROD4

9.00e-05133829539123
Pubmed

Eya1 and Six1 are essential for early steps of sensory neurogenesis in mammalian cranial placodes.

NEUROD1 NEUROD4

9.00e-051338215496442
Pubmed

bHLH gene expression in the Emx2-deficient dentate gyrus reveals defective granule cells and absence of migrating precursors.

NEUROD1 NEUROD2

1.05e-041438215084498
Pubmed

COUP-TFI promotes radial migration and proper morphology of callosal projection neurons by repressing Rnd2 expression.

NEUROD1 NEUROD2

1.05e-041438221965613
Pubmed

An efficient method for generation of bi-allelic null mutant mouse embryonic stem cells and its application for investigating epigenetic modifiers.

DOT1L DDX27

1.05e-041438228981838
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

WDR3 WBP11 CHD3 SSRP1 DDX27 GRK6 IQGAP1

1.07e-04102438724711643
Pubmed

Integral bHLH factor regulation of cell cycle exit and RGC differentiation.

NEUROD1 NEUROD4

1.21e-041538229770538
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

WDR3 WBP11 ZCCHC17 SSRP1 KIF3A NOL8

1.24e-0472338634133714
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

WDR3 WBP11 SSRP1 DDX27 IQGAP1 KNOP1

1.31e-0473138629298432
Pubmed

ATRX proximal protein associations boast roles beyond histone deposition.

PARN DOT1L SSRP1

1.37e-049138334780483
Pubmed

Ptf1a is essential for the differentiation of GABAergic and glycinergic amacrine cells and horizontal cells in the mouse retina.

NEUROD1 NEUROD4

1.38e-041638217301087
Pubmed

BARHL2 differentially regulates the development of retinal amacrine and ganglion neurons.

NEUROD1 NEUROD4

1.38e-041638219339595
Pubmed

Gbx2 is required for the morphogenesis of the mouse inner ear: a downstream candidate of hindbrain signaling.

NEUROD1 MYO15A

1.38e-041638215829521
Pubmed

CAMK2D serves as a molecular scaffold for RNF8-MAD2 complex to induce mitotic checkpoint in glioma.

NUCKS1 WBP11 SSRP1

1.51e-049438337468549
Pubmed

FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.

PARN CHD3 SSRP1 NOL8

1.54e-0424838427926873
Pubmed

The role of Pax2 in mouse inner ear development.

NEUROD1 MYO15A

1.56e-041738215242798
Pubmed

A stream of cells migrating from the caudal telencephalon reveals a link between the amygdala and neocortex.

NEUROD1 NEUROD2

1.56e-041738217694053
Pubmed

Coordinated regulation of gene expression by Brn3a in developing sensory ganglia.

NEUROD1 NEUROD4

1.56e-041738215253936
Pubmed

Phylogenetic and expression analysis of the basic helix-loop-helix transcription factor gene family: genomic approach to cellular differentiation.

NEUROD1 NEUROD2 NEUROD4

1.70e-049838318557763
Pubmed

The role of Sonic hedgehog of neural origin in thalamic differentiation in the mouse.

NEUROD1 NEUROD4

1.76e-041838219244520
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

WDR3 ZCCHC17 BBX BTBD3 NOL8 KNOP1

1.83e-0477738635844135
Pubmed

Requirement for integrin-linked kinase in neural crest migration and differentiation and outflow tract morphogenesis.

NEUROD1 NEUROD4

1.96e-041938224131868
Pubmed

Neurogenin 2 has an essential role in development of the dentate gyrus.

NEUROD1 NEUROD4

1.96e-041938218448566
Pubmed

Foxn4 controls the genesis of amacrine and horizontal cells by retinal progenitors.

NEUROD1 NEUROD4

1.96e-041938215363391
Pubmed

Sim1-expressing cells illuminate the origin and course of migration of the nucleus of the lateral olfactory tract in the mouse amygdala.

NEUROD1 NEUROD2

1.96e-041938233492553
Pubmed

Altered visual function and interneuron survival in Atrx knockout mice: inference for the human syndrome.

NEUROD1 NEUROD4

2.18e-042038219088125
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

NUCKS1 WBP11 ZCCHC17 SSRP1 DDX27 NOL8

2.24e-0480738622681889
Pubmed

The proneural bHLH genes Mash1, Math3 and NeuroD are required for pituitary development.

NEUROD1 NEUROD4

2.41e-042138230307165
Pubmed

Zac1 functions through TGFbetaII to negatively regulate cell number in the developing retina.

NEUROD1 NEUROD4

2.41e-042138217559664
Pubmed

Sip1 regulates the generation of the inner nuclear layer retinal cell lineages in mammals.

NEUROD1 NEUROD4

2.41e-042138227385012
Pubmed

A transcriptional network coordinately determines transmitter and peptidergic fate in the dorsal spinal cord.

NEUROD1 NEUROD2

2.41e-042138218721803
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

CHD3 BBX SSRP1 NOL8

2.55e-0428338430585729
Pubmed

Specification of the mammalian cochlea is dependent on Sonic hedgehog.

NEUROD1 MYO15A

2.65e-042238212231626
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

CHD9 CHD3 BBX SSRP1 DDX27

2.74e-0453338530554943
Pubmed

The functional interactome landscape of the human histone deacetylase family.

CHD3 BBX KDM5A DDX27

2.76e-0428938423752268
Pubmed

Acheate-scute like 1 (Ascl1) is required for normal delta-like (Dll) gene expression and notch signaling during retinal development.

NEUROD1 NEUROD4

2.90e-042338219191219
Pubmed

A comprehensive negative regulatory program controlled by Brn3b to ensure ganglion cell specification from multipotential retinal precursors.

NEUROD1 NEUROD4

2.90e-042338218367606
Pubmed

Requirement for Bhlhb5 in the specification of amacrine and cone bipolar subtypes in mouse retina.

NEUROD1 NEUROD4

3.16e-042438217092954
Pubmed

GDF11 controls the timing of progenitor cell competence in developing retina.

NEUROD1 NEUROD4

3.43e-042538215976303
Pubmed

Notch 1 inhibits photoreceptor production in the developing mammalian retina.

NEUROD1 NEUROD4

3.43e-042538216452096
Pubmed

Xrcc4 physically links DNA end processing by polynucleotide kinase to DNA ligation by DNA ligase IV.

LIG4 SSRP1

3.43e-042538215385968
Pubmed

Rewiring the retinal ganglion cell gene regulatory network: Neurod1 promotes retinal ganglion cell fate in the absence of Math5.

NEUROD1 NEUROD4

3.72e-042638218787067
Pubmed

AP2gamma regulates basal progenitor fate in a region- and layer-specific manner in the developing cortex.

NEUROD1 NEUROD4

3.72e-042638219749747
Pubmed

Conditional Inactivation of Pen-2 in the Developing Neocortex Leads to Rapid Switch of Apical Progenitors to Basal Progenitors.

NEUROD1 NEUROD2

4.01e-042738230692224
Pubmed

Gene expression is dynamically regulated in retinal progenitor cells prior to and during overt cellular differentiation.

NEUROD1 NEUROD4

4.01e-042738224148613
Pubmed

An isoform of retinoid-related orphan receptor β directs differentiation of retinal amacrine and horizontal interneurons.

NEUROD1 NEUROD4

4.63e-042938223652001
Pubmed

Distinct effects of Hedgehog signaling on neuronal fate specification and cell cycle progression in the embryonic mouse retina.

NEUROD1 NEUROD4

4.63e-042938219474320
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

WDR3 GUF1 ZCCHC17 SSRP1 KDM5A DDX27 KNOP1

4.97e-04131838730463901
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

WDR3 PARN CHD3 DDX27

5.15e-0434138432971831
Pubmed

The functional interactome of PYHIN immune regulators reveals IFIX is a sensor of viral DNA.

WDR3 DDX27 NOL8 KNOP1

5.62e-0434938425665578
Pubmed

Blimp1 suppresses Chx10 expression in differentiating retinal photoreceptor precursors to ensure proper photoreceptor development.

NEUROD1 NEUROD4

6.01e-043338220463215
InteractionZNF512 interactions

WDR3 NUCKS1 ZCCHC17 CHD3 BBX SSRP1 DDX27 NOL8 KNOP1

8.85e-10256389int:ZNF512
InteractionPOLR1G interactions

WDR3 CHD9 WBP11 PARN BBX DOT1L SSRP1 DDX27 NOL8 KNOP1

1.66e-084893810int:POLR1G
InteractionSRSF6 interactions

ZCCHC17 CHD3 BBX DOT1L SSRP1 DDX27 IQGAP1 NOL8 KNOP1

3.00e-07503389int:SRSF6
InteractionGNL2 interactions

WBP11 ZCCHC17 CHD3 SNAPC1 BBX DOT1L DDX27 KNOP1

4.98e-07386388int:GNL2
InteractionZNF330 interactions

WBP11 PARN CHD3 BBX SSRP1 DDX27 NOL8 KNOP1

1.48e-06446388int:ZNF330
InteractionNUP43 interactions

WDR3 CHD9 PARN CHD3 BBX SSRP1 KDM5A DDX27 KNOP1

1.83e-06625389int:NUP43
InteractionADARB1 interactions

WDR3 ZCCHC17 CHD3 BBX SSRP1 DDX27 NOL8 KNOP1

2.93e-06489388int:ADARB1
InteractionMAGEB2 interactions

PARN ZCCHC17 CHD3 BBX DDX27 NOL8 KNOP1

3.50e-06349387int:MAGEB2
InteractionILF3 interactions

WDR3 NUCKS1 PARN CHD3 BBX DOT1L SSRP1 IQGAP1 NOL8 KNOP1

4.36e-068963810int:ILF3
InteractionRBM5 interactions

LIG4 WBP11 PARN CHD3 DOT1L

5.26e-06135385int:RBM5
InteractionNOP56 interactions

WDR3 PARN CHD3 DOT1L SSRP1 DDX27 NOL8 KNOP1

9.02e-06570388int:NOP56
InteractionNOP2 interactions

CHD3 BBX DOT1L SSRP1 DDX27 NOL8 KNOP1

1.10e-05416387int:NOP2
InteractionUSP36 interactions

WDR3 PARN ZCCHC17 CHD3 SSRP1 DDX27 NOL8 KNOP1

1.29e-05599388int:USP36
InteractionNIFK interactions

WDR3 PARN CHD3 BBX DDX27 NOL8 KNOP1

1.39e-05431387int:NIFK
InteractionRPL22 interactions

NUCKS1 ZCCHC17 CHD3 SNAPC1 BBX DDX27 KNOP1

1.58e-05440387int:RPL22
InteractionMPHOSPH6 interactions

WDR3 PARN SNAPC1 DOT1L

1.86e-0584384int:MPHOSPH6
InteractionSNRNP40 interactions

WDR3 WBP11 CHD3 DOT1L SSRP1 DDX27 NOL8 KNOP1

2.01e-05637388int:SNRNP40
InteractionCBX3 interactions

WDR3 NUCKS1 CHD9 CHD3 BBX SSRP1 NOL8 KNOP1

2.23e-05646388int:CBX3
InteractionRPL11 interactions

LIG4 ZCCHC17 CHD3 SNAPC1 DOT1L SSRP1 DDX27 KNOP1

2.38e-05652388int:RPL11
InteractionRPS6 interactions

WDR3 PARN CHD3 BBX DOT1L DDX27 IQGAP1 NOL8 KNOP1

2.73e-05874389int:RPS6
InteractionDDX23 interactions

WBP11 PARN CHD3 SSRP1 DDX27 NOL8 KNOP1

2.77e-05480387int:DDX23
InteractionZMYND8 interactions

ZCCHC17 CHD3 DOT1L SSRP1 KDM5A

2.83e-05191385int:ZMYND8
InteractionRPL31 interactions

WDR3 WBP11 PARN CHD3 BBX DDX27 NOL8 KNOP1

3.22e-05680388int:RPL31
InteractionH3C1 interactions

NUCKS1 WBP11 PARN CHD3 BBX SSRP1 KDM5A DDX27 KNOP1

3.47e-05901389int:H3C1
InteractionEXOSC4 interactions

WDR3 PARN SNAPC1 DOT1L KNOP1

3.69e-05202385int:EXOSC4
InteractionPOLR1E interactions

WDR3 BBX DOT1L SSRP1 NOL8 KNOP1

4.54e-05350386int:POLR1E
InteractionTECTB interactions

WDR3 SSRP1 DDX27

4.60e-0537383int:TECTB
InteractionSYNCRIP interactions

ACSL4 CHD3 DOT1L UFSP2 SSRP1 DDX27 IQGAP1 KNOP1

4.87e-05721388int:SYNCRIP
InteractionCOIL interactions

WDR3 CHD9 CHD3 BBX DOT1L SSRP1 KNOP1

6.72e-05552387int:COIL
InteractionTERF2IP interactions

NUCKS1 WBP11 PARN CHD3 BBX SSRP1 KNOP1

6.72e-05552387int:TERF2IP
InteractionCENPA interactions

CHD3 BBX DOT1L SSRP1 NOL8 KNOP1

6.85e-05377386int:CENPA
InteractionH2AJ interactions

WBP11 ZCCHC17 SSRP1 KNOP1

9.40e-05127384int:H2AJ
InteractionMEN1 interactions

WDR3 PARN CHD3 DOT1L SSRP1 DDX27 IQGAP1 NOL8 KNOP1

9.70e-051029389int:MEN1
InteractionKIF23 interactions

WDR3 ACSL4 CHD9 CHD3 DOT1L SSRP1 DDX27 IQGAP1 NOL8

9.85e-051031389int:KIF23
InteractionRPL13A interactions

ZCCHC17 CHD3 BBX DOT1L DDX27 NOL8 KNOP1

1.03e-04591387int:RPL13A
InteractionFGFBP1 interactions

BBX SSRP1 DDX27 NOL8 KNOP1

1.15e-04257385int:FGFBP1
InteractionPARP1 interactions

WDR3 NUCKS1 GUF1 PARN CHD3 BBX SSRP1 DDX27 NOL8 KNOP1

1.19e-0413163810int:PARP1
InteractionRRP8 interactions

WDR3 ZCCHC17 DOT1L DDX27 KNOP1

1.20e-04259385int:RRP8
InteractionNOL9 interactions

CHD3 SNAPC1 DOT1L GRK6

1.45e-04142384int:NOL9
InteractionANOS1 interactions

WDR3 BBX DDX27 KNOP1

1.49e-04143384int:ANOS1
InteractionCFAP141 interactions

WBP11 ZCCHC17 KNOP1

1.52e-0455383int:CFAP141
InteractionWDR5 interactions

NUCKS1 ACSL4 CHD3 GIPC2 DOT1L SSRP1 KDM5A DDX27 IQGAP1

1.62e-041101389int:WDR5
InteractionFBL interactions

WDR3 CHD3 DOT1L SSRP1 DDX27 NOL8 KNOP1

1.67e-04639387int:FBL
InteractionMKI67 interactions

WDR3 CHD3 BBX DOT1L DDX27 GRK7 KNOP1

1.82e-04648387int:MKI67
InteractionZC3H18 interactions

WDR3 WBP11 CHD3 DOT1L SSRP1 DDX27 IQGAP1 KNOP1

1.90e-04877388int:ZC3H18
InteractionZC3H13 interactions

WBP11 CHD3 DOT1L SSRP1

2.18e-04158384int:ZC3H13
InteractionDNAJC9 interactions

WDR3 DOT1L SSRP1 DDX27 KIF3A

2.23e-04296385int:DNAJC9
InteractionCAVIN2 interactions

WBP11 DOT1L SSRP1

2.27e-0463383int:CAVIN2
InteractionWDR3 interactions

WDR3 CHD3 DOT1L IQGAP1

2.29e-04160384int:WDR3
InteractionSPOUT1 interactions

SNAPC1 DOT1L DDX27 KNOP1

2.46e-04163384int:SPOUT1
InteractionEED interactions

WDR3 NUCKS1 ACSL4 WBP11 ZCCHC17 CHD3 SSRP1 KDM5A DDX27 IQGAP1

2.57e-0414453810int:EED
InteractionKMT2A interactions

NUCKS1 CHD3 DOT1L SSRP1 KDM5A

2.93e-04314385int:KMT2A
InteractionRPL28 interactions

ZCCHC17 CHD3 BBX DDX27 IQGAP1 NOL8

2.98e-04494386int:RPL28
InteractionCHD4 interactions

WDR3 WBP11 CHD3 DOT1L SSRP1 DDX27 IQGAP1 KNOP1

3.01e-04938388int:CHD4
InteractionPWP2 interactions

WDR3 CHD3 DOT1L DDX27

3.02e-04172384int:PWP2
InteractionCST7 interactions

STK32A ZCCHC17

3.11e-0414382int:CST7
InteractionRPL36 interactions

NUCKS1 CHD3 DOT1L DDX27 NOL8 KNOP1

3.32e-04504386int:RPL36
InteractionSRPK2 interactions

WBP11 ZCCHC17 DOT1L DDX27 EFCAB12 NOL8 KNOP1

3.38e-04717387int:SRPK2
InteractionZNF467 interactions

WDR3 ZCCHC17 BBX DDX27

3.51e-04179384int:ZNF467
InteractionRPL3 interactions

CHD3 SNAPC1 DOT1L DDX27 IQGAP1 NOL8 KNOP1

3.52e-04722387int:RPL3
InteractionRPS16 interactions

WDR3 PARN CHD3 BBX DOT1L DDX27 KNOP1

3.58e-04724387int:RPS16
InteractionAPOBEC3C interactions

CHD3 SSRP1 DDX27 NOL8

4.14e-04187384int:APOBEC3C
InteractionHECTD1 interactions

WDR3 ZCCHC17 CHD3 SSRP1 DDX27 IQGAP1 NOL8 KNOP1

4.15e-04984388int:HECTD1
InteractionMNDA interactions

WDR3 DDX27 NOL8 KNOP1

4.22e-04188384int:MNDA
InteractionAPTX interactions

LIG4 SSRP1 KIF3A

4.27e-0478383int:APTX
InteractionBRPF1 interactions

NUCKS1 DOT1L SSRP1

4.27e-0478383int:BRPF1
InteractionRPS24 interactions

WDR3 PARN CHD3 DDX27 NOL8 KNOP1

4.30e-04529386int:RPS24
InteractionH3-3A interactions

CHD9 CHD3 BBX DOT1L SSRP1 KDM5A KNOP1

4.39e-04749387int:H3-3A
InteractionOSTM1 interactions

LIG4 GUF1 UFSP2

4.60e-0480383int:OSTM1
InteractionSMC5 interactions

WDR3 WBP11 PARN CHD3 BBX SSRP1 NOL8 KNOP1

4.62e-041000388int:SMC5
InteractionSDAD1 interactions

CHD3 DOT1L SSRP1 DDX27

4.67e-04193384int:SDAD1
InteractionCHD3 interactions

WDR3 CHD3 DOT1L SSRP1 DDX27 IQGAP1 KNOP1

4.68e-04757387int:CHD3
InteractionZNF592 interactions

CHD3 DOT1L SSRP1

4.77e-0481383int:ZNF592
InteractionRPL4 interactions

WDR3 CHD3 BBX DDX27 IQGAP1 NOL8 KNOP1

4.95e-04764387int:RPL4
InteractionCTNNBL1 interactions

WBP11 SNAPC1 KIF3A NOL8

5.04e-04197384int:CTNNBL1
InteractionEIF4A1 interactions

LIG4 CHD3 SNAPC1 DOT1L DDX27

5.13e-04355385int:EIF4A1
InteractionMECP2 interactions

NUCKS1 CHD9 WBP11 ZCCHC17 BBX SSRP1 KDM5A NOL8 KNOP1

5.18e-041287389int:MECP2
InteractionZSCAN31 interactions

BBX NOL8

5.20e-0418382int:ZSCAN31
InteractionCCDC137 interactions

CHD3 DOT1L DDX27 NOL8

5.33e-04200384int:CCDC137
InteractionHNRNPU interactions

WDR3 ACSL4 CHD9 CHD3 DOT1L SSRP1 DDX27 IQGAP1

5.81e-041035388int:HNRNPU
InteractionTCERG1 interactions

CHD3 DOT1L SSRP1 NOL8

6.07e-04207384int:TCERG1
InteractionH3C15 interactions

NUCKS1 WBP11 SSRP1 KDM5A

6.07e-04207384int:H3C15
InteractionWDR36 interactions

WDR3 CHD3 SNAPC1 DOT1L

6.18e-04208384int:WDR36
InteractionMACROH2A2 interactions

NUCKS1 ZCCHC17 BBX SSRP1

6.52e-04211384int:MACROH2A2
InteractionRBBP4 interactions

NUCKS1 CHD3 BBX DOT1L SSRP1 KDM5A

6.55e-04573386int:RBBP4
InteractionDOT1L interactions

WDR3 CHD3 DOT1L SSRP1 DDX27 NOL8 KNOP1

6.85e-04807387int:DOT1L
InteractionKRR1 interactions

PARN CHD3 DOT1L DDX27 KNOP1

6.90e-04379385int:KRR1
InteractionEXOSC10 interactions

WDR3 PARN DOT1L SSRP1

8.02e-04223384int:EXOSC10
InteractionRIF1 interactions

NUCKS1 CHD3 DOT1L SSRP1

8.29e-04225384int:RIF1
InteractionSYMPK interactions

PARN CHD3 DOT1L SSRP1

8.29e-04225384int:SYMPK
InteractionRPL5 interactions

CHD3 SNAPC1 DOT1L SSRP1 DDX27 KNOP1

8.77e-04606386int:RPL5
InteractionKDM5B interactions

NUCKS1 CHD3 KDM5A

8.82e-04100383int:KDM5B
InteractionRAI1 interactions

NUCKS1 CHD3 SSRP1

8.82e-04100383int:RAI1
InteractionPHF14 interactions

NUCKS1 CHD3 SSRP1

8.82e-04100383int:PHF14
InteractionTUBGCP3 interactions

ACSL4 SNAPC1 DOT1L IQGAP1

8.85e-04229384int:TUBGCP3
InteractionDNAJC8 interactions

WDR3 WBP11 SSRP1 NOL8

9.00e-04230384int:DNAJC8
InteractionRFC1 interactions

NUCKS1 CHD3 DOT1L SSRP1

9.14e-04231384int:RFC1
InteractionCD2BP2 interactions

WBP11 CHD3 DOT1L SSRP1

9.29e-04232384int:CD2BP2
InteractionGPATCH4 interactions

CHD3 BBX DOT1L DDX27

9.29e-04232384int:GPATCH4
InteractionH2AC17 interactions

PARN SSRP1 DDX27 KNOP1

9.29e-04232384int:H2AC17
GeneFamilyBasic helix-loop-helix proteins

NEUROD1 NEUROD2 NEUROD4

4.04e-04110243420
GeneFamilyPHD finger proteins

CHD3 KDM5A

6.30e-039024288
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

CNTLN KDM5A DDX27 NOL8 KNOP1

6.83e-071973850fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCellGlobus_pallidus-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Neurod2-Excitatory_Neuron.Slc17a7.Neurod2-C1ql3_(Nucleus_of_the_lateral_olfactory_tract_(LOT))|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

NEUROD1 NEUROD2 FER1L6

1.93e-0561383a9f5cbbe5683f2574130ffe8d375d693b9aa8f2d
ToppCellGlobus_pallidus-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Neurod2-Excitatory_Neuron.Slc17a7.Neurod2-C1ql3_(Nucleus_of_the_lateral_olfactory_tract_(LOT))-|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

NEUROD1 NEUROD2 FER1L6

1.93e-05613833797e1e122818211664847bb54730034af61430e
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn|World / Primary Cells by Cluster

CHD9 NEUROD2 BBX NEUROD4

2.30e-05196384721650a08d260faf530dbd52d4e9275d27f3bac2
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn-38|World / Primary Cells by Cluster

CHD9 NEUROD2 BBX NEUROD4

2.30e-0519638438da0751941adca650fe9b383d9f343153978eb5
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

CHD3 NEUROD1 NEUROD2 NEUROD4

2.39e-051983846d12ecaa9532c134d9c4562534dcb59a6420b4d3
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-IPC_like-IPs_and_early_cortical_neurons|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

CHD3 NEUROD1 NEUROD2 NEUROD4

2.39e-051983847943e4f67c3d6efb5c8b00aa0ff3cfe7be10c48d
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW23-Neuronal-Cortical_neuron|GW23 / Sample Type, Dataset, Time_group, and Cell type.

ACSL4 NEUROD1 NEUROD2 NOL8

2.48e-052003847bba2ff09349c8db3d1ccf53520b12cbf7b0abac
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-IPC_like-IPs_and_early_cortical_neurons|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

2.70e-04148383c0237ba7d4040b6a497094b362dfb8b3a97a7d06
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-IPC_like|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

2.70e-04148383a261c6d3d9cf0311c053fca66c37d39e66db6ad8
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-IPC_like|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

3.16e-041563837e6805ebc7bc2f9c5965321d16922c155719970f
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M-IPC_like-IPs_and_early_cortical_neurons|Organoid-1M / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

3.16e-04156383741de05295b2d012ac8576378f37709a97c8fb50
ToppCellTCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma-3|TCGA-Skin / Sample_Type by Project: Shred V9

KIF3A BTBD3 KNOP1

3.34e-04159383fb222c42f66901852b01cec073ec0732245ee973
ToppCelldroplet-Lung-immune-endo-depleted-3m-Lymphocytic-Zbtb32+_B|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STK32A PARN NEUROD4

3.46e-04161383249c2b97cc25de5053f5048ee354615df49b2081
ToppCelldroplet-Lung-immune-endo-depleted-3m-Lymphocytic-B_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STK32A PARN NEUROD4

3.72e-0416538322293c6b55f44636440cd737efb786ff5de3373d
ToppCellfacs-Lung-EPCAM-3m-Epithelial-club_cell_of_bronchiole|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GIPC2 MYO15A DNAI3

4.06e-0417038382ccba6ec53f6ca0d19949a1277434c565af2983
ToppCellfacs-Lung-3m-Epithelial-airway_epithelial-club_cell|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

GIPC2 MYO15A DNAI3

4.06e-041703836de3778e8257c3330db0780c59238ca501fe5059
ToppCellfacs-Lung-3m-Epithelial-airway_epithelial-club_cell-club_cell|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

GIPC2 MYO15A DNAI3

4.06e-0417038360887da674ef1a735bad618235608312d8de63d3
ToppCellfacs-Lung-EPCAM-3m-Epithelial-Club_Cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GIPC2 MYO15A DNAI3

4.06e-04170383ab19ea729ed8c8361c870e79893d1a95a1e487fa
ToppCellfacs|World / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ACSL4 CHD9 IQGAP1

4.20e-04172383a2d0a64ebf09d219a07d6bbad1056bad6d46b9be
ToppCellfacs-Marrow-B-cells-24m-Hematologic-hematopoietic_stem_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NEUROD1 ARHGEF33 TFPI2

4.20e-04172383a7fd4d61fb5017dce001d69d6b9a01e6cdf58828
ToppCellfacs-Marrow-B-cells-24m-Hematologic-Unknown_Progenitor|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NEUROD1 ARHGEF33 TFPI2

4.20e-0417238365b8935a972bf00b7a10dc2d442128fc0ed78bcb
ToppCell3'-Child04-06-SmallIntestine-Epithelial-neuro-epithelial-EC_cells_(TAC1+)|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

NEUROD1 TFPI2 BTBD3

4.34e-04174383a62531ebf16b32b249168dca11b870f63a8aa81c
ToppCell3'-GW_trimst-1-SmallIntestine-Mesenchymal-mesothelial_cell-Mesothelium_(RGS5+)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

MYO15A EFCAB12 SEMA3E

4.41e-04175383f5451c29c487b998778e50349b3d774d5e20fd28
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_2|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

STK32A ACSL4 HOXD9

4.56e-04177383c9e8149639551a4c8daa90fcb2b895fdcff2e2ba
ToppCelltumor_Lymph_Node_/_Brain-Fibroblasts-Smooth_muscle_cells|Fibroblasts / Location, Cell class and cell subclass

PARN ARHGEF33 SEMA3E

4.72e-0417938383506e00fe99b6450efd2f13f716926a0a4b03cd
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

NEUROD1 DNAI3 EFCAB12

4.79e-0418038392fb01b91261b3103454924cde56add337b41844
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 DNAI3 EFCAB12

4.79e-041803835c9d2d44d840cd4ec7d42d43446ba2b689e7ec43
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-3m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NEUROD1 NEUROD2 BTBD3

4.79e-04180383f6a2208960d0df1500c974cc44c3c054cd7475a9
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Deuterosomal-Deuterosomal_mature|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 DNAI3 EFCAB12

4.79e-04180383c60e74fbbd815a0251253a19dc520a254b2e1762
ToppCellP28-Epithelial|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

ACSL4 GIPC2 SEMA3E

5.11e-0418438305811d13bd8a602095a3fcf5e55345edadc7b8bf
ToppCellP28-Epithelial-alveolar_epithelial_cell|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

ACSL4 GIPC2 SEMA3E

5.19e-041853835bb513e569f3a197d55ae2ca683e202daebabeac
ToppCellfacs-Brain_Non-Myeloid-Cerebellum-3m|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NEUROD1 NEUROD2 BTBD3

5.19e-04185383cdd75abdaa1ecedfd2e636203b83a6ac1782f0c3
ToppCellfacs-Lung-18m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l25-31|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

STK32A TFPI2 SEMA3E

5.36e-04187383fa8f221b4c2df61eadaa9c77e4cf45848b00330b
ToppCellPND14-Epithelial-Epithelial_Airway|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 DNAI3 SEMA3E

5.36e-041873831399c703505211c510b3f14c7a2aa9930566c473
ToppCelltumor_Lung-Epithelial_cells-tS3|Epithelial_cells / Location, Cell class and cell subclass

DNAI3 EFCAB12 KIF3A

5.36e-041873833cea677279e71fdb9879530dea10a5e6393beacd
ToppCellPND03|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 IQGAP1 SEMA3E

5.36e-04187383b3fcb36d853adfdea7172c5591de06f027e50af3
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Lymphocytic-Lymphocytic_B-B_cell-B_c01-TCL1A|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)

CHD9 BTBD3 IQGAP1

5.52e-04189383b13f315f617840eb5143a4e8a33a657c20365c21
ToppCellPND10-Epithelial|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ACSL4 GIPC2 SEMA3E

5.52e-0418938389349e226a5512833a94b1bf68056a6985fe4afd
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 DNAI3 SEMA3E

5.61e-0419038335248a8be476ea8d06d67c3d98a25be1f7c150b7
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated-Ciliated_mature|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 DNAI3 SEMA3E

5.61e-041903835f5206f9e725070d865f4c891ff08bb750e58582
ToppCellwk_08-11-Epithelial-Proximal_epithelial-intermediate_neuroendocrine|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

STK32A NEUROD1 NEUROD2

5.61e-041903835f1863bce9400b7c932f0e4d0e012ec4e8d7e555
ToppCellPND14-Epithelial-Epithelial_Airway-Ciliated/Deuterosomal-Ciliated|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 DNAI3 SEMA3E

5.61e-04190383088e3f39a1e5e11354d6e7458e8e6a39f14936b3
ToppCellPBMC_fresh-frozen-Severe-critical_convalescent_d14-21|PBMC_fresh-frozen / Compartment, severity and other cell annotations on 10x 3' data (130k)

NEUROD1 NEUROD2 SEMA3E

5.61e-041903837179f980f895d3e5b839b5ae26b5c991787bfe3a
ToppCell3'-Airway_Nasal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

TFPI2 EFCAB12 FER1L6

5.61e-041903832fdc024d3d673a0134b74b4c5a63afe924995730
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3_mon-IPC_like-IPCs|3_mon / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

5.69e-04191383e4c1c533771b582e21683dbec6f93a558d865e00
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CHD9 BTBD3 IQGAP1

5.69e-0419138360c986d2dcbc19d9338c03da6cb5e1d92fd48f8e
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CHD9 BTBD3 IQGAP1

5.69e-0419138309db184cb90fe282a14474d7217068c58092c6f8
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3_mon-IPC_like|3_mon / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

5.69e-0419138348cffb55c71bb8b34e926fc461fcd345ce43ea00
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CHD9 BTBD3 IQGAP1

5.69e-04191383973117730d6ba5f127e7a0bfabfd0ff2ca7ac131
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-IPC_like|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

5.87e-04193383f24bae40f5cbcfece04fbefe4e3de1b88ac90de4
ToppCellPND03-Epithelial-Epithelial_Alveolar|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ACSL4 GIPC2 SEMA3E

5.87e-041933835dfa69a680a0859900141c40a446d217aaa747d3
ToppCellPND03-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ACSL4 GIPC2 SEMA3E

5.87e-04193383ebea35704ac5d21e947ae094313cf2a5205e7014
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-IPC_like-IPCs|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

5.87e-041933832088f1d210c73f74685492c63065c62ac3f553e9
ToppCellE18.5-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT1-AT1_mature|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 IQGAP1 SEMA3E

5.96e-04194383ad3eb98f94a007c5988ede06238255f5b03bee6e
ToppCellPND01-Epithelial|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ACSL4 IQGAP1 SEMA3E

5.96e-04194383d21db5e942966ed44bc78ff50130a201fc627074
ToppCell10x3'2.3-week_14-16-Lymphocytic_B-B_lineage-pro_B_progenitor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

CHD9 LIG4 BBX

5.96e-04194383f64da5f62e29253d60b9546edf734ba5c17daae1
ToppCellBrain_organoid-organoid_Velasco_nature-3_mon-IPC_like|3_mon / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

5.96e-041943833e90be6f5b1c5c83632e62941fb18d6a627ec1b5
ToppCellE18.5-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT1|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GIPC2 IQGAP1 SEMA3E

5.96e-04194383a281ebab117589fc922ead0a712cfe0a844c94ac
ToppCellBrain_organoid-organoid_Velasco_nature-3_mon-IPC_like-IPCs/Immature_PNs|3_mon / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

6.05e-041953835e36a881fe2646f5a95d07d7b9265e6ada38730c
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-Newborn-41|World / Primary Cells by Cluster

NEUROD1 KIF3A SEMA3E

6.14e-04196383dee0984cd63a1a2fdebb4421af48ab566a5b684e
ToppCellcritical-Epithelial-Secretory|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

CHD3 FER1L6 KNOP1

6.14e-04196383dbf14f5851c2b779a8b35e820c4584ea9096e49d
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-Deep_Layer|World / Primary Cells by Cluster

CHD3 NEUROD1 KIF3A

6.23e-0419738341e823b14697827f657b13adb3afa581bd91a9cb
ToppCell(3)_Chondrocytes-(34)_Chondro-progen|(3)_Chondrocytes / Cell class and subclass of bone marrow stroma cells in homeostatis

HOXD9 BTBD3 SEMA3E

6.23e-04197383012c49a57f9c2a3dfa988cd3882c8c6b7ef3a5ad
ToppCell10x3'2.3-week_14-16-Lymphocytic_B-B_lineage-pre_pro_B_progenitor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

NUCKS1 CHD9 CNTLN

6.32e-041983838aa4149d2c1cec73cfd654db093252ec8ec5ef68
ToppCellLPS_only-Epithelial_airway-airway_epithelial-Ciliated|LPS_only / Treatment groups by lineage, cell group, cell type

ARHGEF33 DNAI3 SEMA3E

6.32e-041983836d90b541fde357fbb40f8f7d4e8628a48b679718
ToppCellkidney_cells-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

CHD9 TFPI2 IQGAP1

6.41e-04199383174f6013af6eafa577f84205a62927f2b367fda3
ToppCellNS-control-d_0-4-Epithelial-Secretory|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

CHD9 CHD3 KNOP1

6.41e-0419938332bdfff40fd442b88489c8b0f79af3927a51a03c
ToppCellcontrol-Epithelial-Secretory|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

CHD9 CHD3 KNOP1

6.41e-041993833d01f90ffd271ca00129192787e4921bdca7e01e
ToppCellcontrol-Epithelial-Secretory|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

CHD9 CHD3 KNOP1

6.41e-04199383262e5b8a52c8ddb0b47048c786e8bdb7158e1b9a
ToppCellBronchial-10x5prime-Epithelial-Epi_airway_ciliated-Deuterosomal|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

DNAI3 EFCAB12 FER1L6

6.41e-0419938392778939e9d06599c7d06cfd8f4362b97ed0606b
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage-pre_pro_B_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

NUCKS1 CNTLN SSRP1

6.41e-0419938399778178e3ec121802db938db8c5475d19b43fec
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Neuronal|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

CHD3 NEUROD2 KIF3A

6.41e-0419938377b4aa00f14b86ef5db0490be98787e063979541
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW09|fetalBrain_Zhong_nature / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 CNTLN TFPI2

6.41e-04199383399e73d45638848e68edda120316ceff04d98680
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Neuronal-Neuron|10w / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

6.51e-04200383332905a686356cd1e024d40679be98e9d8b1b5e8
ToppCellNon-neuronal-Dividing-IPC-IPC-div2|World / Primary Cells by Cluster

CNTLN BBX NEUROD4

6.51e-042003834923d7a4f00853c4d76fc1cc0fa82d522a2302e7
ToppCellTCGA-Bile_Duct-Primary_Tumor-Cholangiocarcinoma|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

SSRP1 DDX27 KNOP1

6.51e-04200383ad2a6da0b1ae7a9212a3c91e5eec4baa7481d8dc
ToppCellTCGA-Bile_Duct-Primary_Tumor|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

SSRP1 DDX27 KNOP1

6.51e-042003830350e5ffd36033099b7e32a1fdd790fff99790dc
ToppCellBrain_organoid-organoid_Tanaka_cellReport-2m-Neuronal-Neuron|2m / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

6.51e-04200383a581f1704a87b0390e1e2ff85053367d85247755
ToppCellBrain_organoid-organoid_Tanaka_cellReport-2m-Neuronal-Intermediate|2m / Sample Type, Dataset, Time_group, and Cell type.

CHD3 NEUROD2 KIF3A

6.51e-042003832a635694844ddabcd98462c5636a6f41a3f08a46
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-OPC_related|3m / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

6.51e-042003833dcaeb9f1e387784c299bfe0da1516598f82edf5
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuronal|6m / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 KIF3A

6.51e-04200383cedbc47b1defb5973cf7ab6baaa2d6f2fd481f88
ToppCellBrain_organoid-organoid_Tanaka_cellReport-5w-Neuronal-Neuron|5w / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 ARHGEF33 NEUROD4

6.51e-042003836f3fe94107fa2a2ded4888780b36700cce48adb7
ToppCellBrain_organoid-organoid_Tanaka_cellReport-5w-OPC_related|5w / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

6.51e-04200383b19a75d4f23e9685cbb6c6fa873d7726f27bd5f2
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Neuronal-Neuron|3m / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

6.51e-042003833d134ae3c48ff4d1849db4fbe44ff73fb6c8c779
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuronal-Neuron|6m / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

6.51e-04200383b5019b9d48f32cffd4645a5c0f3e0ac504ea8019
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-OPC_related-Oligodendrocyte/OPC|3m / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 BBX NEUROD4

6.51e-042003837557ea33c3d080d0fa4ca0c2703279932d01e6d0
ToppCellNon-neuronal-Dividing-IPC-IPC-div2-5|World / Primary Cells by Cluster

CNTLN BBX NEUROD4

6.51e-04200383dc1c1506823eaa105f1532c6b5d4efa14e788314
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Neuronal-Cortical_neuron|10w / Sample Type, Dataset, Time_group, and Cell type.

ACSL4 CHD3 KIF3A

6.51e-0420038368c90376e2779434e4ad8dc6dd3b44baa700e2f4
ToppCellBrain_organoid-organoid_Tanaka_cellReport-5w-OPC_related-Oligodendrocyte/OPC|5w / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 NEUROD2 NEUROD4

6.51e-04200383b99dc49b735430a5ac51159575b904020d861927
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW09|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.

NEUROD1 CNTLN TFPI2

6.51e-04200383c792d1dbbe27ebd60f4770834f30882c1a625be5
DiseaseCHARGE syndrome (implicated_via_orthology)

CHD9 SEMA3E

3.20e-057372DOID:0050834 (implicated_via_orthology)
Diseasealcohol use disorder (implicated_via_orthology)

KDM5A GRK7 GRK6

1.87e-03195373DOID:1574 (implicated_via_orthology)
DiseaseMetastatic melanoma

STK32A GRK7

2.10e-0354372C0278883
Diseasewhite matter lesion progression measurement

GIPC2 BTBD3

3.60e-0371372EFO_0007746
Diseaseallergic disease, age at onset

KIF3A IQGAP1

3.60e-0371372EFO_0004847, MONDO_0005271
DiseaseLiver carcinoma

ACSL4 HOXD9 TFPI2 IQGAP1

3.63e-03507374C2239176
Diseasetemporal horn of lateral ventricle volume measurement

STK32A SEMA3E

3.70e-0372372EFO_0010333
Diseaseinfluenza A (H1N1)

GIPC2 NEUROD4

5.35e-0387372EFO_1001488
Diseaseneurotic disorder

BBX SEMA3E

7.15e-03101372EFO_0004257

Protein segments in the cluster

PeptideGeneStartEntry
AKKKNAMAKRIKAKP

ACSL4

36

O60488
PPKKKVKSREKKMSK

BBX

526

Q8WY36
KRSRKLKEGNKKLMK

CNTLN

706

Q9NXG0
KRKKLKKSSMAKLYK

ARHGEF33

451

A8MVX0
KTKKKKMAADIFPRK

BTBD3

56

Q9Y2F9
MPLKLRGKKKAKSKE

GIPC2

1

Q8TF65
KKKLNKKGRKMAGRK

DOT1L

396

Q8TEK3
MAPKQKKKTSRGKKR

DNAI3

1

Q8IWG1
RGKKKRKKFMKDAKK

DDX27

676

Q96GQ7
TDKKTPKKSKKMRFK

EFCAB12

466

Q6NXP0
KGKVSKKPREMKGKK

IQGAP1

1541

P46940
KKPREMKGKKSKKIS

IQGAP1

1546

P46940
RKMKLLKRQAEGKKK

GUF1

631

Q8N442
LSEGRKKAKKLKRMK

PARN

601

O95453
KKAKKLKRMKKELSP

PARN

606

O95453
KKNKKMVKKSKPERK

NUCKS1

151

Q9H1E3
RMGKKKRAMKGKKPS

MYO15A

91

Q9UKN7
RRMKMKKMSKEKCPK

HOXD9

336

P28356
DPKASAKKKMKSKKK

KNOP1

261

Q1ED39
RDDKPKESKAKRKKK

NOL8

961

Q76FK4
MDCRKKHKDAKRKMK

NOL8

1151

Q76FK4
KKRRGKKKVSPDKMI

KIF3A

406

Q9Y496
KQKSKELKKMDKPRK

KDM5A

1521

P29375
ELKKMDKPRKKKLKL

KDM5A

1526

P29375
GKEEKKGRRMKSKPK

CHD9

561

Q3L8U1
KGRRMKSKPKDKDSK

CHD9

566

Q3L8U1
KKRKAAPKMKKVIGI

LIG4

626

P49917
RKKLRGKKMAPLKIK

CHD3

281

Q12873
KLEKKRIKKRKGEAM

GRK6

216

P43250
MYACKKLDKKRLKKK

GRK7

216

Q8WTQ7
KKKDKMLKKKPKDDG

FER1L6

1256

Q2WGJ9
KKKRLAKKEKDMRKC

STK32A

326

Q8WU08
KKEKKERLKPAGRKM

SNAPC1

306

Q16533
KKAKMAKDRKSRKKP

SSRP1

521

Q08945
IKRKFMRKKDKKLSD

UFSP2

96

Q9NUQ7
NPSRKRKKEKKKKKH

ZCCHC17

181

Q9NP64
DRKRKKLKMSPSKWK

SEMA3E

736

O15041
RACAKALKKKKKMPK

TFPI2

206

P48307
ALKKKKKMPKLRFAS

TFPI2

211

P48307
KMKKARKKAKLHSSK

WDR3

321

Q9UNX4
ADMPGKSRKKKKNMK

WBP11

311

Q9Y2W2
KSRKKKKNMKELTPL

WBP11

316

Q9Y2W2
PKRRGPKKKKMTKAR

NEUROD1

81

Q13562
PKKKKMTKARLERFK

NEUROD1

86

Q13562
PKKRGPKKRKMTKAR

NEUROD2

101

Q15784
KPKRRGPKKKKMTKA

NEUROD4

66

Q9HD90