Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionsmall GTPase binding

KNTC1 GAPVD1 GGA2 MYCBP2 LRRK2 TSC2 FMNL2 IQGAP1 DOCK5 HPS4 DOCK2 DMXL2 DNM1L CSE1L APPL2

1.20e-0532124715GO:0031267
GeneOntologyMolecularFunctionGTPase binding

KNTC1 GAPVD1 GGA2 MYCBP2 LRRK2 TSC2 FMNL2 IQGAP1 DOCK5 HPS4 DOCK2 DMXL2 DNM1L CSE1L APPL2

4.55e-0536024715GO:0051020
GeneOntologyMolecularFunctionphosphatidylinositol-3,4-bisphosphate 4-phosphatase activity

INPP4A INPP4B

1.52e-0422472GO:0016316
GeneOntologyMolecularFunctioninositol-3,4-bisphosphate 4-phosphatase activity

INPP4A INPP4B

1.52e-0422472GO:0052828
GeneOntologyMolecularFunctioninositol-1,3,4-trisphosphate 4-phosphatase activity

INPP4A INPP4B

1.52e-0422472GO:0017161
GeneOntologyMolecularFunctionmedium-chain fatty acid omega-hydroxylase activity

CYP4A11 CYP4A22

1.52e-0422472GO:0140981
GeneOntologyMolecularFunction16-hydroxypalmitate dehydrogenase activity

CYP4A11 CYP4A22

1.52e-0422472GO:0103002
GeneOntologyMolecularFunctionphosphatase activity

INPP4A STYXL2 PP2D1 INPP4B LPIN1 SBF1 PTPRR ALPG PPP4R1 DUSP7 PPM1A CDC25B

2.54e-0428724712GO:0016791
GeneOntologyMolecularFunctionbenzaldehyde dehydrogenase (NAD+) activity

ALDH3A1 ALDH3B1

4.53e-0432472GO:0018479
GeneOntologyMolecularFunctionmicrotubule binding

DCDC1 GJB6 LRRK2 EML2 MAP1LC3A MAP1LC3B2 MAP1LC3B KIF13B TOGARAM2 DNM1L TUBGCP6 KIF13A

4.80e-0430824712GO:0008017
GeneOntologyBiologicalProcessresponse to starvation

GPR155 FOXK2 LRRK2 MAP1LC3A TSC2 MAP1LC3B2 MAP1LC3B GCN1 ATG7 SZT2 SLC39A4 CPS1 NUAK2

4.17e-0622924713GO:0042594
GeneOntologyBiologicalProcesscellular response to nitrogen levels

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

9.21e-06122474GO:0043562
GeneOntologyBiologicalProcesscellular response to nitrogen starvation

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

9.21e-06122474GO:0006995
GeneOntologyBiologicalProcessautophagy of mitochondrion

MAP1LC3A TSC2 MAP1LC3B2 MAP1LC3B ATG7 DNM1L HUWE1 VPS13D LRBA

9.52e-061142479GO:0000422
GeneOntologyBiologicalProcesscellular response to starvation

GPR155 LRRK2 MAP1LC3A TSC2 MAP1LC3B2 MAP1LC3B GCN1 ATG7 SZT2 SLC39A4 NUAK2

1.50e-0518524711GO:0009267
GeneOntologyBiologicalProcessmitophagy

TSC2 MAP1LC3B ATG7 DNM1L HUWE1 VPS13D LRBA

3.22e-05752477GO:0000423
GeneOntologyBiologicalProcessmacroautophagy

SNF8 TRAF6 PSEN1 ARMC3 LRRK2 MAP1LC3A TSC2 NOD1 MAP1LC3B2 MAP1LC3B ATG7 DNM1L HUWE1 VPS13D LRBA

4.88e-0537424715GO:0016236
GeneOntologyBiologicalProcessautophagosome assembly

TRAF6 PSEN1 LRRK2 MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7 LRBA

1.06e-041212478GO:0000045
GeneOntologyBiologicalProcessnegative regulation of cellular component organization

KNTC1 PSEN1 LRRK2 EML2 TSC2 STN1 NLGN3 STXBP1 RECQL4 KNL1 ANKRD13D HSPG2 ANK3 ATG7 FAT3 TOGARAM2 DNM1L SPECC1L GRIN2B HUWE1 LDLR TGFBR3 CST5 TNR

1.19e-0486424724GO:0051129
GeneOntologyCellularComponentautolysosome

LRRK2 MAP1LC3A MAP1LC3B2 MAP1LC3B

5.27e-05182494GO:0044754
DomainARM-type_fold

ARMC3 USP9X LRRK2 TSC2 USP9Y TRRAP FMNL2 FOCAD DOCK5 DNAAF5 INSC MROH7 ULK4 PDS5A MMS19 USP35 TAF2 GCN1 DOCK2 PPP4R1 TOGARAM2 FRYL HUWE1 VIRMA PPP4R3B RIF1 CSE1L PRKDC LRBA

1.24e-1533924629IPR016024
DomainARM-like

ARMC3 USP9X LRRK2 TSC2 USP9Y TRRAP DNAAF5 INSC MROH7 ULK4 PDS5A MMS19 USP35 GCN1 DOCK2 PPP4R1 TOGARAM2 FRYL HUWE1 PPP4R3B RIF1 CSE1L PRKDC LRBA

1.75e-1327024624IPR011989
Domain-

ARMC3 USP9X LRRK2 TSC2 TRRAP DNAAF5 INSC MROH7 ULK4 PDS5A MMS19 GCN1 PPP4R1 TOGARAM2 FRYL RIF1 CSE1L PRKDC LRBA

1.23e-10222246191.25.10.10
DomainHEAT_REPEAT

DNAAF5 MROH7 ULK4 PDS5A MMS19 GCN1 PPP4R1 PRKDC

3.77e-06702468PS50077
Domain-

ADGRG4 FAT2 USH2A HSPG2 FAT3 LAMA3 PAPPA LRBA

3.66e-059524682.60.120.200
DomainAtg8

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.20e-0482463PF02991
DomainAtg8-like

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.20e-0482463IPR004241
DomainLAM_G_DOMAIN

FAT2 USH2A HSPG2 FAT3 LAMA3

1.34e-04382465PS50025
DomainLaminin_G_2

FAT2 USH2A HSPG2 FAT3 LAMA3

1.72e-04402465PF02210
DomainLamG

FAT2 USH2A HSPG2 FAT3 LAMA3

2.72e-04442465SM00282
PathwayKEGG_MEDICUS_REFERENCE_AUTOPHAGY_VESICLE_NUCLEATION_ELONGATION_MATURATION_LC3_II_FORMATION

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

1.68e-05131804M47458
PathwayKEGG_MEDICUS_REFERENCE_AUTOPHAGOSOME_AND_LYSOSOME_FUSION_TETHERING_FACTOR_GRASP55

MAP1LC3A MAP1LC3B2 MAP1LC3B

3.98e-0561803M47979
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

GAPVD1 MYCBP2 USP9X TRRAP NSUN2 IQGAP1 RBM25 SBF1 PDS5A GCN1 TCF20 AHCTF1 FRYL HUWE1 VIRMA RIF1 CSE1L UTP25 TLN1 GEMIN4 PRKDC MTREX SPEN

5.68e-106532522322586326
Pubmed

Large-scale proteomics and phosphoproteomics of urinary exosomes.

SNF8 GPR155 ARMC3 LRRK2 IQGAP1 SLC22A6 STXBP1 GLB1 N4BP2L2 ALDH3B1 ALK HSPG2 DYNC2H1 AHCTF1 HUWE1 PKD1L3 TSPAN1 TGFBR3 VPS13D CSE1L APPL2 TLN1 GEMIN4 CTH SLC4A4 HBB SPEN UEVLD

1.79e-0910162522819056867
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

TRAF6 MYCBP2 EIF4A3 USP9X APBB3 TSC2 USP9Y FMNL2 NSUN2 IQGAP1 FOCAD STXBP1 MIA2 HPS4 N4BP2L2 QARS1 PPP4R1 DMXL2 SUPT20H ANK3 DNAAF9 GRIN2B HUWE1 REV3L PPP4R3B APPL2 DLEU7 PRKDC LRBA CUX1

1.99e-0812852523035914814
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

GAPVD1 FOXK2 PRR5L ITGA9 KLHL32 MED24 NLGN3 POLR3D PTPRR FECH SLC25A38 N4BP2L2 CPLANE1 DNA2 NMT1 KIF13B ANK3 AHCTF1 HIPK2 DNM1L TMEM39B FRYL HUWE1 LDLR OR10AD1 ACCSL KIF13A

2.91e-0810842522711544199
Pubmed

LMBR1L regulates lymphopoiesis through Wnt/β-catenin signaling.

LAPTM4A GAPVD1 USP9X TSC2 NSUN2 IQGAP1 MED24 DNAAF5 KIDINS220 PNPLA6 GLB1 PDS5A MMS19 TMEM109 QARS1 GCN1 DYNC2H1 AHCTF1 HUWE1 CSE1L TLN1 DNAJC11 GEMIN4 CTH PRKDC

2.91e-089422522531073040
Pubmed

Autophagy modulates dynamics of connexins at the plasma membrane in a ubiquitin-dependent manner.

MAP1LC3A GJB1 GJB2 ATG7

3.99e-086252422496425
Pubmed

Autophagy proteins regulate the secretory component of osteoclastic bone resorption.

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

3.99e-086252422055344
Pubmed

Autophagy appears during the development of the mouse lower first molar.

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

3.99e-086252423052835
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

NCOA6 FOXK2 MYCBP2 APBB3 EML2 TSC2 TRRAP HIRA FOCAD PNPLA6 SBF1 ULK4 MICAL3 WDR90 GCN1 ANKRD13D HSPG2 SZT2 BICRA FRYL HUWE1 REV3L LDLR TLN1 PRKDC LRBA SPEN

4.30e-0811052522735748872
Pubmed

Comparative interactome analysis of α-arrestin families in human and Drosophila.

EIF4A3 USP9X TSC2 PSMD13 FMNL2 LPIN1 KIDINS220 MMS19 GCN1 PMPCB DTNA HUWE1 GEMIN4 SPEN

8.31e-083132521438270169
Pubmed

The autophagy-inducing kinases, ULK1 and ULK2, regulate axon guidance in the developing mouse forebrain via a noncanonical pathway.

MAP1LC3A MAP1LC3B2 ULK4 MAP1LC3B CNTN2 ATG7

8.62e-0831252629099309
Pubmed

The mouse APG10 homologue, an E2-like enzyme for Apg12p conjugation, facilitates MAP-LC3 modification.

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

9.26e-087252412890687
Pubmed

CLEC16A interacts with retromer and TRIM27, and its loss impairs endosomal trafficking and neurodevelopment.

PSEN1 MYCBP2 TSC2 PSMD13 DNAAF5 KIDINS220 PNPLA6 PDS5A DNA2 HSDL1 SZT2 PMPCB DYNC2H1 HUWE1 TUBGCP6 PPP4R3B RIF1 VPS13D DNAJC11

1.17e-076062521936538041
Pubmed

A human MAP kinase interactome.

KIAA0232 FMNL2 HPS4 CPLANE1 GCN1 SUPT20H TCF20 ANK3 BICRA HIPK2 LAMA3 SPECC1L RIF1 CSE1L PRKDC SLC4A4 CUX1

1.19e-074862521720936779
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

NCOA6 GAPVD1 MYCBP2 USP9X TRRAP RBM25 TAF2 GCN1 TCF20 ANK3 AHCTF1 SPECC1L HUWE1 TLN1 PRKDC LRBA SPEN CUX1

1.31e-075492521838280479
Pubmed

METTL3 protects METTL14 from STUB1-mediated degradation to maintain m6 A homeostasis.

UBR1 PSMD13 NSUN2 MMS19 TMEM109 QARS1 USH2A GCN1 LARP1B GEMIN4 PRKDC MTREX

1.43e-072312521236597993
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

KNTC1 GAPVD1 EIF4A3 USP9X TRPC1 PSMD13 NSUN2 IQGAP1 RBM25 KIDINS220 PDS5A QARS1 GCN1 MGAM2 PMPCB DYNC2H1 PCLO DNM1L HUWE1 MRPL4 RIF1 CSE1L TLN1 DNAJC11 ZC3HAV1L GEMIN4 RBM5 PRKDC MTREX SPEN

1.88e-0714252523030948266
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

UBR1 MYCBP2 EIF4A3 PSMD13 TRRAP NSUN2 CXXC1 HIRA IQGAP1 PNPLA6 SBF1 RECQL4 PDS5A MMS19 DDX60L TAF2 QARS1 GCN1 TCF20 GNE PMPCB AHCTF1 HUWE1 RIF1 CSE1L TLN1 GEMIN4 PRKDC MTREX

2.11e-0713532522929467282
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

GAPVD1 EIF4A3 USP9X PSMD13 IQGAP1 DNAAF5 PDS5A QARS1 GCN1 COG7 DNM1L HUWE1 RIF1 CSE1L TLN1 GEMIN4 PRKDC LRBA MTREX

2.56e-076382521933239621
Pubmed

Consortin, a trans-Golgi network cargo receptor for the plasma membrane targeting and recycling of connexins.

GGA2 GJB6 GJB1 GJB2

3.30e-079252419864490
Pubmed

Developmental expression of LC3alpha and beta: absence of fibronectin or autophagy phenotype in LC3beta knockout mice.

MAP1LC3A MAP1LC3B2 MAP1LC3B

3.76e-073252318069693
Pubmed

Microtubule-Associated Protein 1 Light Chain 3 (LC3) Isoforms in RPE and Retina.

MAP1LC3A MAP1LC3B2 MAP1LC3B

3.76e-073252329721994
Pubmed

Ablation of connexin30 in transgenic mice alters expression patterns of connexin26 and connexin32 in glial cells and leptomeninges.

GJB6 GJB1 GJB2

3.76e-073252322098503
Pubmed

Autophagy is required and protects against apoptosis during myoblast differentiation.

MAP1LC3B2 MAP1LC3B ATG7

3.76e-073252324865278
Pubmed

ATG7 is dispensable for LC3-PE conjugation in thioglycolate-elicited mouse peritoneal macrophages.

MAP1LC3B2 MAP1LC3B ATG7

3.76e-073252333459130
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

SPTLC3 TMEM144 FOXK2 EPHA6 MYCBP2 INPP4A KIAA0232 TRRAP DOCK5 DNAAF5 NLGN3 LRFN2 KIDINS220 PNPLA6 PTPRR FECH MICAL3 B3GNTL1 ANK3 ATG7 DTNA BICRA HIPK2 LAMA3 FRYL HUWE1 H6PD RBM5 LRBA CUX1

4.74e-0714892523028611215
Pubmed

Large-scale mapping of human protein-protein interactions by mass spectrometry.

KNTC1 GAPVD1 TRAF6 MYCBP2 USP9X EML2 TSC2 PSMD13 TRRAP IQGAP1 DNAAF5 RBM25 GLB1 PDS5A MMS19 GCN1 HSDL1 PPP4R1 BPIFB3 FRYL PKD1L3 PPM1A PPP4R3B GEMIN4 LRBA MTREX CDC25B

8.25e-0712842522717353931
Pubmed

Essential Roles of L-Type Amino Acid Transporter 1 in Syncytiotrophoblast Development by Presenting Fusogenic 4F2hc.

MAP1LC3A GJB2 MAP1LC3B2 MAP1LC3B

8.53e-0711252428320871
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

SNF8 KNTC1 GAPVD1 EIF4A3 USP9X PSMD13 NSUN2 IQGAP1 DNAAF5 NUP37 MMS19 QARS1 NMT1 GCN1 PPP4R1 GNE ATG7 COG7 DNM1L FRYL HUWE1 PPP4R3B CSE1L APPL2 TLN1 CTH PRKDC LRBA KIF13A

9.27e-0714552522922863883
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

GAPVD1 USP9X NSUN2 IQGAP1 PDS5A MMS19 GCN1 DNM1L HUWE1 RIF1 CSE1L TLN1 PRKDC

1.09e-063322521332786267
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

UBR1 NCOA6 GAPVD1 MYCBP2 TRRAP NSUN2 IQGAP1 MED24 RBM25 PNPLA6 MICAL3 NMT1 TCF20 HUWE1 VIRMA TUBGCP6 RIF1 ELF1 PRKDC SPEN

1.13e-067742522015302935
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

GAPVD1 GGA2 ACACB LRRK2 FMNL2 DOCK5 KIDINS220 PDS5A GCN1 ANK3 MUC16 DNM1L SPECC1L HUWE1 RIF1 RBM5 PRKDC LRBA SPEN CUX1

1.20e-067772522035844135
Pubmed

BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.

GAPVD1 USP9X IQGAP1 RBM25 KIDINS220 PDS5A MICAL3 QARS1 GCN1 ANK3 DTNA AHCTF1 DNM1L CSE1L TLN1 ZC3HAV1L GEMIN4 PRKDC LRBA

1.21e-067082521939231216
Pubmed

Autophagy is essential for mouse sense of balance.

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

1.27e-0612252420577052
Pubmed

Multiple roles of integrin-α3 at the neuromuscular junction.

MAP1LC3A MAP1LC3B2 MAP1LC3B PCLO

1.27e-0612252428386022
Pubmed

Comprehensive proteomic analysis of interphase and mitotic 14-3-3-binding proteins.

GAPVD1 MYCBP2 TSC2 IQGAP1 GCN1 CPS1 VIRMA CSE1L TLN1 PRKDC

1.42e-061902521015161933
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

EIF4A3 PSMD13 IQGAP1 DOCK5 NUP37 GCN1 KNL1 DOCK2 DNM1L MAGEE2 HUWE1 RIF1 CSE1L TLN1 GEMIN4 PRKDC MTREX

1.45e-065822521720467437
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

NCOA6 FOXK2 TSC2 TRRAP HIRA MED24 PDS5A KIF13B TCF20 RIF1 GEMIN4 MTREX SPEN

1.46e-063412521332971831
Pubmed

The Contribution of Melanoregulin to Microtubule-Associated Protein 1 Light Chain 3 (LC3) Associated Phagocytosis in Retinal Pigment Epithelium.

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.50e-064252325301234
Pubmed

Atg8 transfer from Atg7 to Atg3: a distinctive E1-E2 architecture and mechanism in the autophagy pathway.

MAP1LC3B2 MAP1LC3B ATG7

1.50e-064252322055190
Pubmed

Autophagic compartments gain access to the MHC class II compartments in thymic epithelium.

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.50e-064252319915056
Pubmed

The Hedgehog signalling pathway regulates autophagy.

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.50e-064252323149744
Pubmed

Acetylation modulates LC3 stability and cargo recognition.

MAP1LC3A MAP1LC3B2 MAP1LC3B

1.50e-064252330633346
Pubmed

Mapping of the azh locus to mouse chromosome 4.

CYP4A11 H6PD CYP4A22

1.50e-06425231552159
Pubmed

Mapping the MOB proteins' proximity network reveals a unique interaction between human MOB3C and the RNase P complex.

USP9X PSMD13 NSUN2 IQGAP1 MIA2 PDS5A MMS19 QARS1 GCN1 HUWE1 CSE1L TLN1 PRKDC MTREX

1.53e-063992521437536630
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

FOXK2 EIF4A3 PSMD13 TRRAP NSUN2 IQGAP1 MED24 RBM25 POLR3D PDS5A MMS19 TAF2 SUPT20H TCF20 ATG7 MED16 DNM1L VIRMA PPP4R3B RIF1 CSE1L PRKDC MTREX

1.61e-0610142522332416067
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

LAPTM4A NCOA6 GAPVD1 GGA2 EIF4A3 IQGAP1 SBF1 USP38 HPS4 WDR90 DNA2 SZT2 NUAK2 TUBGCP6 PPP4R3B MTREX

1.90e-065292521614621295
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

KNTC1 NCOA6 FOXK2 MYCBP2 EIF4A3 TRRAP NSUN2 IQGAP1 MED24 PDS5A KNL1 DOCK2 TCF20 MED16 BICRA TOGARAM2 PPP4R3B TLN1 RBM5 ELF1 PRKDC MTREX SPEN CUX1

1.95e-0611032522434189442
Pubmed

SERBP1 Promotes Stress Granule Clearance by Regulating 26S Proteasome Activity and G3BP1 Ubiquitination and Protects Male Germ Cells from Thermostimuli Damage.

GAPVD1 EIF4A3 USP9X PSMD13 NSUN2 IQGAP1 DNAAF5 NUP37 MMS19 GCN1 HSPG2 ATG7 PMPCB QTRT2 DNM1L HUWE1 CSE1L GOLPH3L TLN1 PRKDC LRBA

2.05e-068782522137223481
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

INPP4A USP9X PHYHIP FMNL2 IQGAP1 NLGN3 KIDINS220 STXBP1 PNPLA6 SBF1 MICAL3 HSDL1 CNTN2 DMXL2 ANK3 PCLO DNM1L SPECC1L GRIN2B VIRMA NUAK2 CSE1L TENM4 APPL2 TLN1 SLC4A4 HBB TNR

2.07e-0614312522837142655
Pubmed

Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.

MYCBP2 EIF4A3 PSMD13 NSUN2 IQGAP1 QARS1 NMT1 GCN1 DOCK2 ANK3 DYNC2H1 PCLO HUWE1 CSE1L GOLPH3L TLN1 PRKDC LRBA HBB DISP1

2.13e-068072522030575818
Pubmed

Targeted ubiquitination and degradation of G-protein-coupled receptor kinase 5 by the DDB1-CUL4 ubiquitin ligase complex.

EIF4A3 USP9X FMNL2 PNPLA6 MMS19 FRYL GEMIN4 PRKDC MTREX

2.25e-06156252922952844
Pubmed

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.

KNTC1 IQGAP1 DOCK5 SBF1 MROH7 MMS19 GCN1 FRYL SPECC1L PRKDC

2.46e-062022521033005030
Pubmed

SARS-CoV-2 uses Spike glycoprotein to control the host's anaerobic metabolism by inhibiting LDHB.

GAPVD1 USP9X PSMD13 NSUN2 IQGAP1 RBM25 QARS1 GCN1 PMPCB HUWE1 VIRMA CSE1L UTP25 TLN1 ZC3HAV1L CTH MTREX

2.54e-066072521739147351
Pubmed

Autophagy restricts HIV-1 infection by selectively degrading Tat in CD4+ T lymphocytes.

MAP1LC3A MAP1LC3B ATG7

3.72e-065252325339774
Pubmed

Autophagy-related gene Atg5 is essential for astrocyte differentiation in the developing mouse cortex.

MAP1LC3A MAP1LC3B2 MAP1LC3B

3.72e-065252325227738
Pubmed

Loss of PINK1 function promotes mitophagy through effects on oxidative stress and mitochondrial fission.

MAP1LC3B ATG7 DNM1L

3.72e-065252319279012
Pubmed

TRAF6 inhibits colorectal cancer metastasis through regulating selective autophagic CTNNB1/β-catenin degradation and is targeted for GSK3B/GSK3β-mediated phosphorylation and degradation.

TRAF6 MAP1LC3B ATG7

3.72e-065252330806153
Pubmed

Autophagy Regulates the Liver Clock and Glucose Metabolism by Degrading CRY1.

MAP1LC3B2 MAP1LC3B ATG7

3.72e-065252329937374
Pubmed

FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.

GAPVD1 ACACB TOPAZ1 USP9X PSMD13 USP9Y TRRAP MICAL3 TMEM109 QARS1 SUPT20H ANK3 TOGARAM2 VPS13D LRBA

4.10e-064972521536774506
Pubmed

Systematic analysis of human protein complexes identifies chromosome segregation proteins.

KNTC1 GAPVD1 EIF4A3 CCNO NSUN2 STN1 IQGAP1 NUP37 RECQL4 FECH PDS5A MICAL3 TMEM109 GCN1 KNL1 ALPG COG7 AHCTF1 CPS1 TUBGCP6 TLN1 SASS6 PRKDC CDC25B

4.26e-0611552522420360068
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

GAPVD1 MYCBP2 USP9X TRRAP NSUN2 SBF1 NUP37 MMS19 QARS1 MED16 HUWE1 PPP4R3B UTP25 MTREX

4.73e-064402521434244565
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

FOXK2 TRRAP HIRA IQGAP1 MED24 KIDINS220 PNPLA6 SBF1 NUP37 TMEM266 PDS5A TAF2 NMT1 SUPT20H MED16 AHCTF1 SPECC1L VIRMA RIF1 PIGT APPL2 UTP25 TLN1 DNAJC11 GEMIN4 RBM5 MTREX SPEN

4.84e-0614972522831527615
Pubmed

TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.

NCOA6 ACACB USP9X PARD6G STXBP1 FECH TAF2 KNL1 TCF20 DYNC2H1 MUC16 REV3L VIRMA PIGT ASXL3 SPEN CUX1

4.91e-066382521731182584
Pubmed

Human transcription factor protein interaction networks.

NCOA6 FOXK2 ACACB USP9X PSMD13 TRRAP NSUN2 CXXC1 HIRA MED24 RBM25 PDS5A TAF2 QARS1 HSPG2 SUPT20H TCF20 DTNA BICRA HIPK2 MRPL4 RIF1 CSE1L ELF1 SPEN KAT14 CUX1

6.03e-0614292522735140242
Pubmed

Synaptic GAP and GEF Complexes Cluster Proteins Essential for GTP Signaling.

USP9X IQGAP1 NLGN3 STXBP1 DMXL2 ANK3 PCLO DNM1L SPECC1L GRIN2B TNR

7.39e-062812521128706196
Pubmed

Increased alveolar epithelial TRAF6 via autophagy-dependent TRIM37 degradation mediates particulate matter-induced lung metastasis.

TRAF6 MAP1LC3B2 MAP1LC3B

7.40e-066252334524943
Pubmed

E1-like activating enzyme Atg7 is preferentially sequestered into p62 aggregates via its interaction with LC3-I.

MAP1LC3A MAP1LC3B ATG7

7.40e-066252324023838
Pubmed

Phosphatidylserine in addition to phosphatidylethanolamine is an in vitro target of the mammalian Atg8 modifiers, LC3, GABARAP, and GATE-16.

MAP1LC3A MAP1LC3B ATG7

7.40e-066252316303767
Pubmed

The variant Polycomb Repressor Complex 1 component PCGF1 interacts with a pluripotency sub-network that includes DPPA4, a regulator of embryogenesis.

ACACB USP9X TSC2 PSMD13 FECH GCN1 TCF20 PCLO MUC16 HUWE1 SASS6 PRKDC SPEN

7.44e-063962521326687479
Pubmed

The SOX2-interactome in brain cancer cells identifies the requirement of MSI2 and USP9X for the growth of brain tumor cells.

FOXK2 USP9X MMS19 TAF2 GCN1 KNL1 DNM1L MRPL4 MTREX SPEN CUX1

7.64e-062822521123667531
Pubmed

Characterization of the EGFR interactome reveals associated protein complex networks and intracellular receptor dynamics.

USP9X ITIH2 DNAAF5 MMS19 GCN1 COG7 CSE1L GEMIN4 PRKDC

8.30e-06183252923956138
Pubmed

E3 ubiquitin ligase RNF123 targets lamin B1 and lamin-binding proteins.

GAPVD1 OR5M10 TOPAZ1 TSC2 FMNL2 CXXC1 FOCAD DOCK5 RECQL4 PDS5A PCLO MAGEE2 HUWE1 REV3L PPM1A TLN1 PRKDC TNR

8.33e-067362521829676528
Pubmed

Homeodomain interacting protein kinase 2 regulates postnatal development of enteric dopaminergic neurons and glia via BMP signaling.

MAP1LC3A MAP1LC3B2 MAP1LC3B HIPK2

9.58e-0619252421957238
Pubmed

The UAS thioredoxin-like domain of UBXN7 regulates E3 ubiquitin ligase activity of RNF111/Arkadia.

PSMD13 MED24 DNAAF5 ATG7 MED16 DNM1L CSE1L

9.92e-06102252737024974
Pubmed

IGF2BP1/IMP1 Deletion Enhances a Facultative Stem Cell State via Regulation of MAP1LC3B.

MAP1LC3B2 MAP1LC3B ATG7

1.29e-057252338081361
Pubmed

Induced Mist1 expression promotes remodeling of mouse pancreatic acinar cells.

GJB1 MAP1LC3B2 MAP1LC3B

1.29e-057252322510200
Pubmed

Anthracyclines induce DNA damage response-mediated protection against severe sepsis.

MAP1LC3B2 MAP1LC3B ATG7

1.29e-057252324184056
Pubmed

Autophagy in microglia degrades extracellular β-amyloid fibrils and regulates the NLRP3 inflammasome.

MAP1LC3A MAP1LC3B ATG7

1.29e-057252325126727
Pubmed

Hydrogen sulfide-induced GAPDH sulfhydration disrupts the CCAR2-SIRT1 interaction to initiate autophagy.

MAP1LC3B2 MAP1LC3B ATG7

1.29e-057252333459133
Pubmed

A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.

ACACB TOPAZ1 RBM25 SBF1 PTPRR FAM186A DNAH8 ALK MUC16 PPM1A CSE1L CDC25B SPEN

1.39e-054202521328065597
Pubmed

Large neutral amino acid levels tune perinatal neuronal excitability and survival.

MAP1LC3A MAP1LC3B2 MAP1LC3B CUX1

1.46e-0521252436996814
Pubmed

Interactome of the Autoimmune Risk Protein ANKRD55.

EIF4A3 USP9X PNPLA6 MMS19 GCN1 CSE1L TLN1 PRKDC LRBA

1.50e-05197252931620119
Pubmed

The protein network surrounding the human telomere repeat binding factors TRF1, TRF2, and POT1.

USP9X TAF2 DOCK2 KIF13B REV3L VIRMA TLN1 ZC3HAV1L MTREX

1.50e-05197252920811636
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

MYCBP2 EIF4A3 USP9Y TRRAP CXXC1 HIRA RBM25 KIDINS220 SBF1 PDS5A GCN1 HSDL1 ALPG DMXL2 SUPT20H TCF20 MED16 MRPL4 CSE1L RBM5 PRKDC SPEN

1.52e-0510822522238697112
Pubmed

Defining the membrane proteome of NK cells.

MYCBP2 EIF4A3 USP9X PSMD13 KIDINS220 PNPLA6 MIA2 RECQL4 MMS19 GCN1 DOCK2 MED16 DNM1L HUWE1 LDLR TUBGCP6 SLC22A18 PIGT CSE1L GEMIN4 PRKDC LRBA IL2RB

1.60e-0511682522319946888
Pubmed

KAP1 facilitates reinstatement of heterochromatin after DNA replication.

EIF4A3 TRRAP IQGAP1 STXBP1 GLB1 PDS5A GCN1 DNAH8 HSDL1 KIF13B PMPCB HUWE1 CPS1 VIRMA PRKDC LRBA MTREX

1.75e-057042521729955894
Pubmed

Ubiquitination regulates ER-phagy and remodelling of endoplasmic reticulum.

USP9X MAP1LC3B ATG7 HUWE1

1.78e-0522252437225996
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

KNTC1 TSC2 PSMD13 NSUN2 HIRA IQGAP1 DNAAF5 PDS5A MICAL3 MMS19 DDX60L TMEM109 QARS1 GCN1 COG7 QTRT2 SPECC1L HUWE1 MRPL4 PIGT CSE1L TLN1 GEMIN4 PRKDC MTREX CUX1

1.98e-0514402522630833792
Pubmed

LGALS3BP regulates centriole biogenesis and centrosome hypertrophy in cancer cells.

EIF4A3 USP9X CCNO ADGRG4 IQGAP1 PNPLA6 GLB1 SBF1 FECH CCDC33 PCLO LAMA3 HUWE1 TUBGCP6 PRKDC HBB

2.00e-056392521623443559
Pubmed

Essential role for GABARAP autophagy proteins in interferon-inducible GTPase-mediated host defense.

MAP1LC3A MAP1LC3B2 MAP1LC3B

2.05e-058252328604719
Pubmed

Murine Apg12p has a substrate preference for murine Apg7p over three Apg8p homologs.

MAP1LC3B2 MAP1LC3B ATG7

2.05e-058252311890701
Pubmed

Meiotic gatekeeper STRA8 suppresses autophagy by repressing Nr1d1 expression during spermatogenesis in mice.

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

2.14e-0523252431059511
Pubmed

Systematic Analysis of Human Protein Phosphatase Interactions and Dynamics.

ACACB PSMD13 ITGA9 NSUN2 FECH GCN1 DUSP7 SPECC1L PPP4R3B RIF1 CSE1L GEMIN4 PRKDC MTREX CUX1

2.19e-055732521528330616
Pubmed

LRF maintains genome integrity by regulating the non-homologous end joining pathway of DNA repair.

EIF4A3 IQGAP1 GCN1 DNM1L HUWE1 PRKDC

2.44e-0579252626446488
Pubmed

Quantitative Proteomics of the SMAD (Suppressor of Mothers against Decapentaplegic) Transcription Factor Family Identifies Importin 5 as a Bone Morphogenic Protein Receptor SMAD-specific Importin.

NCOA6 CXXC1 MED24 TAF2 MED16

2.55e-0548252527703004
Pubmed

Ablation of vacuole protein sorting 18 (Vps18) gene leads to neurodegeneration and impaired neuronal migration by disrupting multiple vesicle transport pathways to lysosomes.

MAP1LC3A MAP1LC3B2 MAP1LC3B CUX1

2.55e-0524252422854957
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

MYCBP2 USP9X TSC2 ITIH1 HIRA IQGAP1 NLGN3 SBF1 KIF13B DMXL2 TCF20 ANK3 DNM1L SPECC1L GRIN2B HUWE1 VIRMA SLC4A4 TNR CUX1

2.78e-059632522028671696
Pubmed

SARS-CoV-2 Nsp6 damages Drosophila heart and mouse cardiomyocytes through MGA/MAX complex-mediated increased glycolysis.

LAPTM4A USP9X PSMD13 DNAAF5 NUP37 PDS5A MMS19 TMEM109 QARS1 GCN1 HUWE1 RIF1 CSE1L GEMIN4 RBM5 PRKDC

2.80e-056572521636180527
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

KNTC1 USP9X KNL1 PPP4R1 KIF13B SUPT20H DYNC2H1 DTNA HIPK2 HUWE1 PPP4R3B SASS6 MTREX SPEN KAT14

2.95e-055882521538580884
InteractionCOMTD1 interactions

KNTC1 DNAAF5 NUP37 PDS5A MMS19 QARS1 GCN1 COG7 SLC39A4 PPP4R3B CSE1L GEMIN4 LRBA

1.14e-0620024613int:COMTD1
InteractionDPPA4 interactions

ACACB USP9X MAP1LC3A MMS19 MAP1LC3B QARS1 PCLO HUWE1 SASS6 SPEN KAT14

1.22e-0614024611int:DPPA4
InteractionCASP4 interactions

TRAF6 PSEN1 USP9X DNAAF5 NOD1 GCN1 CASP10

4.03e-06542467int:CASP4
InteractionUBXN7 interactions

UBR1 TRAF6 USP9X PSMD13 NSUN2 MED24 DNAAF5 RECQL4 ATG7 MED16 DNM1L VIRMA NUAK2 CSE1L

5.55e-0626724614int:UBXN7
InteractionDOCK5 interactions

ACACB MYCBP2 KIAA0232 TRRAP DOCK5 SZT2 VIRMA RIF1 GPN2

8.90e-061112469int:DOCK5
InteractionRP2 interactions

KNTC1 TSC2 PDS5A NMT1 DMXL2 COG7 HUWE1 CSE1L

2.14e-05952468int:RP2
InteractionBAG2 interactions

NCOA6 GAPVD1 PSEN1 LRRK2 CXXC1 HIRA DOCK5 RBM25 RECQL4 TAF2 KNL1 KIF13B TCF20 MED16 HUWE1 VIRMA TUBGCP6 VPS13D TLN1 DNAJC11 SPEN

2.74e-0562224621int:BAG2
InteractionPTPRM interactions

PSMD13 IQGAP1 DNAAF5 GCN1 HUWE1 VIRMA CSE1L

2.78e-05722467int:PTPRM
InteractionNPTN interactions

KNTC1 TSC2 FOCAD DNAAF5 PDS5A MMS19 GCN1 DMXL2 DYNC2H1 COG7 HUWE1 CSE1L GEMIN4

4.00e-0527824613int:NPTN
InteractionSIRT7 interactions

GAPVD1 MYCBP2 USP9X TRRAP NSUN2 IQGAP1 RBM25 SBF1 PDS5A GCN1 TCF20 AHCTF1 FRYL HUWE1 VIRMA RIF1 CSE1L UTP25 TLN1 GEMIN4 PRKDC MTREX SPEN

4.46e-0574424623int:SIRT7
InteractionOPALIN interactions

KNTC1 TSC2 DOCK5 SBF1 PDS5A GCN1 MED16 AHCTF1 TMEM39B CSE1L PRKDC

5.47e-0520924611int:OPALIN
GeneFamilyAutophagy related

MAP1LC3A MAP1LC3B2 MAP1LC3B ATG7

2.23e-043316541022
GeneFamilyPleckstrin homology domain containing|Rho guanine nucleotide exchange factors|C2 domain containing

INPP4A INPP4B CCDC33 PCLO

3.14e-04361654823
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

GAPVD1 FOXK2 MYCBP2 USP9X TRPC1 TRRAP HIRA KIDINS220 MIA2 N4BP2L2 PDS5A MICAL3 DMXL2 SUPT20H GNE AHCTF1 FRYL SPECC1L REV3L LDLR TGFBR3 RIF1 CSE1L MTREX SPEN CUX1

2.23e-0785625026M4500
CoexpressionGSE6259_FLT3L_INDUCED_DEC205_POS_DC_VS_BCELL_DN

KNTC1 LRRK2 PCTP DOCK5 PDS5A DNA2 HSDL1 KNL1 SUPT20H TGFBR3

5.81e-0617025010M6762
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

GPR155 UBR1 GAPVD1 GGA2 MYCBP2 INPP4A USP9X INPP4B STN1 IQGAP1 LPIN1 KIDINS220 N4BP2L2 PDS5A MAP1LC3B TMEM109 TRIM38 DOCK2 NLRP1 FRYL HUWE1 REV3L PPM1A PPP4R3B TGFBR3 RIF1 TLN1 ELF1 CTLA4 LRBA SPEN IL2RB

1.59e-05149225032M40023
CoexpressionGSE40274_EOS_VS_FOXP3_AND_EOS_TRANSDUCED_ACTIVATED_CD4_TCELL_DN

SPTLC3 KLHL32 ITIH2 CER1 STXBP1 ALDH3A1 ALPG MUC16

2.18e-051212508M9153
CoexpressionGSE18281_SUBCAPSULAR_CORTICAL_REGION_VS_WHOLE_MEDULLA_THYMUS_UP

PSEN1 TSC2 TRRAP HSPG2 TCF20 SZT2 NLRP1 TLN1 GEMIN4 CDC25B

2.30e-0519925010M7254
CoexpressionGSE20366_EX_VIVO_VS_DEC205_CONVERSION_NAIVE_CD4_TCELL_UP

KNTC1 KIAA0232 NUP37 DNA2 DNM1L FRYL DNAAF9 LDLR APPL2 GOLPH3L

2.40e-0520025010M4327
CoexpressionGOBERT_OLIGODENDROCYTE_DIFFERENTIATION_DN

PARD6G FMNL2 HIRA FOCAD NLGN3 RBM25 NOD1 KIDINS220 MAP1LC3B2 MICAL3 ALDH3B1 MAP1LC3B ANK3 DTNA DUSP7 HIPK2 DNAAF9 TGFBR3 PIGT APPL2 GOLPH3L RBM5 SASS6 ELF1 KIF13A TNR

3.03e-05112425026MM1070
CoexpressionFAN_EMBRYONIC_CTX_OLIG

GPR155 UBR1 TMEM144 PSEN1 EML2 FMNL2 KLHL32 SLC22A6 GJB1 FECH MAP1LC3B CNTN2 KIF13B ANK3 DUSP7 HIPK2 FRYL DNAAF9 LDLR KIF13A

4.12e-0575425020M39037
CoexpressionGOBERT_OLIGODENDROCYTE_DIFFERENTIATION_DN

PARD6G FMNL2 HIRA FOCAD NLGN3 RBM25 NOD1 KIDINS220 MAP1LC3B2 MICAL3 ALDH3B1 ANK3 DTNA DUSP7 HIPK2 DNAAF9 TGFBR3 PIGT APPL2 GOLPH3L RBM5 SASS6 ELF1 KIF13A TNR

5.93e-05110225025M2369
CoexpressionTHAKAR_PBMC_INACTIVATED_INFLUENZA_AGE_21_30YO_RESPONDERS_28DY_DN

APBB3 TRRAP CXXC1 DNAAF5 LPIN1 PNPLA6 SBF1 HPS4 MMS19 DOCK2 MED16 BICRA TOGARAM2 QTRT2 NLRP1 NUAK2 TUBGCP6 SLC22A18 PIGT SPEN IL2RB CUX1

6.20e-0590525022M40865
CoexpressionTABULA_MURIS_SENIS_HEART_ATRIAL_MYOCYTE_AGEING

INPP4A FBXO9 FECH ALDOB SZT2 DTNA PAPPA CUX1

6.84e-051422508MM3703
CoexpressionAtlasDevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_k-means-cluster#5_top-relative-expression-ranked_1000

MYCBP2 USP9X PARD6G IQGAP1 CPLANE1 QARS1 KNL1 PMPCB FAT3 HIPK2 REV3L PPM1A CUX1

4.67e-0720123813gudmap_developingKidney_e15.5_Pelvic Mesenchyme_1000_k5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

NCOA6 USP9X FMNL2 KLHL32 N4BP2L2 PDS5A MICAL3 NMT1 KNL1 DMXL2 TCF20 DYNC2H1 FAT3 PCLO ZBTB12 HUWE1 VIRMA LDLR RIF1 PIGT RBM5 PAPPA PRKDC CUX1

2.29e-0583123824Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlasDevelopingKidney_e15.5_Cap mesenchyme_emap-27738_top-relative-expression-ranked_1000

PRR5L USP9X ITIH2 DOCK5 TAF2 QARS1 KNL1 SUPT20H ANK3 SZT2 DYNC2H1 DTNA FAT3 HIPK2 FRYL HUWE1 REV3L RIF1 DLEU7 SASS6 CTH DISP1 CUX1

2.42e-0577923823gudmap_developingKidney_e15.5_Cap mesenchyme_1000
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000

MYCBP2 USP9X PARD6G CPLANE1 GCN1 ALK ANK3 FAT3 HIPK2 REV3L TENM4 APPL2 ASXL3 KIF13A CUX1

3.20e-0538523815gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlasDevelopingKidney_e15.5_Cap mesenchyme_emap-27738_k-means-cluster#5_top-relative-expression-ranked_1000

USP9X QARS1 KNL1 ANK3 HIPK2 HUWE1 REV3L RIF1 CUX1

4.10e-051462389gudmap_developingKidney_e15.5_Cap mesenchyme_1000_k5
CoexpressionAtlasFacebaseRNAseq_e10.5_Lateral Nasal Eminence_top-relative-expression-ranked_1000

GPR155 NCOA6 ACACB ACADS LAMP5 CER1 N4BP2L2 KEL MICAL3 CPLANE1 DNA2 CCDC33 ATG7 SZT2 COG7 PCLO HIPK2 MAGEE2 H6PD REV3L MRPL4 ASXL3 CTLA4 LRBA HBB KIF13A

4.73e-0598523826Facebase_RNAseq_e10.5_Lateral Nasal Eminence_1000
CoexpressionAtlasDevelopingKidney_e15.5_Cap mesenchyme_emap-27738_top-relative-expression-ranked_500

PRR5L ITIH2 DOCK5 QARS1 SUPT20H ANK3 DTNA FAT3 HIPK2 HUWE1 REV3L DLEU7 CTH DISP1 CUX1

5.08e-0540123815gudmap_developingKidney_e15.5_Cap mesenchyme_500
CoexpressionAtlasDevelopingKidney_e15.5_Medullary collecting duct_emap-28063_k-means-cluster#3_top-relative-expression-ranked_500

MYCBP2 USP9X IQGAP1 CPLANE1 ANK3 HIPK2 REV3L CUX1

5.28e-051172388gudmap_developingKidney_e15.5_Medullary collecting duct_500_k3
ToppCellCD8+_Memory_T_cell-CV-7|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster

KNTC1 UBR1 GAPVD1 MYCBP2 IQGAP1 KIDINS220 DNA2 KIF13B AHCTF1 FRYL HUWE1 LDLR PRKDC LRBA SPEN

3.28e-13191252159454f642c3621370fa23640b631301346b300950
ToppCellCV-Moderate-7|Moderate / Virus stimulation, Condition and Cluster

KNTC1 GAPVD1 MYCBP2 KIDINS220 DMXL2 AHCTF1 FRYL HUWE1 LDLR PRKDC LRBA SPEN

7.27e-1018525212a6c9203ce6c2892a4a369c9bcfb85720f01cbb3f
ToppCellCV-Moderate-7|CV / Virus stimulation, Condition and Cluster

KNTC1 GAPVD1 MYCBP2 KIDINS220 DNA2 DMXL2 AHCTF1 FRYL HUWE1 PRKDC LRBA SPEN

7.73e-10186252128571956890fc9894d766ba294a28e376b4aba428
ToppCellSmart-seq2-blood_(Smart-seq2)-myeloid-myeloid_monocytic-classical_monocyte|blood_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

TOPAZ1 LRRK2 RBM25 FAM186A USH2A DNAH8 PCLO LAMA3 MUC16 GRIN2B TENM4 TLN1

7.73e-101862521223b8d51d20b05795a73892d3e20e0f9b6a207820
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 USP9X KLHL32 IQGAP1 STXBP1 DYNC2H1 PCLO FRYL HUWE1 REV3L LDLR RIF1

1.33e-09195252123e519cffa6144a62b06124642a14c9ff39b76554
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 USP9X KLHL32 IQGAP1 DYNC2H1 PCLO FRYL HUWE1 REV3L LDLR RIF1

1.61e-08195252117796ea9247f4c63762f0de8490fed08b9717fa23
ToppCellControl-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SPTLC3 ITGA9 FMNL2 DOCK5 INSC FAT3 TGFBR3 TENM4 PAPPA

1.05e-0618325297eae9b3b4d1c9b135fa7cff348393d4adec474b4
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

USH2A CNTN2 FAT3 PCLO GRIN2B CPS1 TENM4 ASXL3 SLC4A4

1.10e-0618425292cbed6462fea2622871bb7e49b0df3d984239281
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

USH2A CNTN2 FAT3 PCLO GRIN2B CPS1 TENM4 ASXL3 SLC4A4

1.10e-0618425292b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

USH2A CNTN2 FAT3 PCLO GRIN2B CPS1 TENM4 ASXL3 SLC4A4

1.10e-061842529ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellLPS-antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ITGA9 FMNL2 INSC ANK3 DTNA TGFBR3 TENM4 PAPPA SLC4A4

1.15e-0618525296712512100ccef456d2e2bd201d0987986c92ac9
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_secretory-Secretory_Goblet|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CCNO HNF4G CCDC33 GNE MUC16 TSPAN1 TENM4 ASXL3 SLC4A4

1.70e-061942529e0228f593c3493175962a4817500d4337ddc4e88
ToppCelldroplet-Thymus-nan-24m-Lymphocytic-nan|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GJB2 ALDOB DMXL2 PKD1L3 SLC22A18 CTLA4 SLC4A4 IL2RB

5.33e-06168252804a7810f95196a21325356b42084f96c11af5964
ToppCellE18.5-samps-Epithelial-Alveolar_epithelial-AT2|E18.5-samps / Age Group, Lineage, Cell class and subclass

GJB6 LRRK2 ITGA9 INPP4B TMEM266 ANK3 TSPAN1 NIPAL1

6.61e-061732528f6e36ea98a9c669ff393d141455aaecef083f738
ToppCellPBMC-Mild-Lymphocyte-T/NK-NK_cell-NK_activated-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PRR5L CPLANE1 TOGARAM2 VIRMA PPP4R3B TGFBR3 MTREX IL2RB

7.81e-061772528d3e6c768b88b7906f3c7fdd00ba20842212c14b1
ToppCellPBMC-Mild-Lymphocyte-T/NK-NK_cell-NK_activated|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

PRR5L CPLANE1 TOGARAM2 VIRMA PPP4R3B TGFBR3 MTREX IL2RB

7.81e-061772528f8f101c772c043636bedd6b2ec81409b1d2599bf
ToppCellCOVID-19_Mild-Lymphoid_T/NK-NK_activated|COVID-19_Mild / Disease group, lineage and cell class

PRR5L CPLANE1 TOGARAM2 VIRMA PPP4R3B TGFBR3 MTREX IL2RB

7.81e-0617725286978a22fef40c8b455342373abe7593f5ede0fa4
ToppCellPBMC-Mild-Lymphocyte-T/NK-NK_cell-NK_activated|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

PRR5L CPLANE1 TOGARAM2 VIRMA PPP4R3B TGFBR3 MTREX IL2RB

7.81e-061772528936ab2b180a052387124f68d0c7f41c0b164e748
ToppCellPBMC-Mild-Lymphocyte-T/NK-NK_cell-NK_activated-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

PRR5L CPLANE1 TOGARAM2 VIRMA PPP4R3B TGFBR3 MTREX IL2RB

7.81e-061772528d5aeda113afaa2425874394610344570c9078478
ToppCelldroplet-Liver-nan-3m-Myeloid-nan|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TSC2 ITGA9 FMNL2 IQGAP1 TAF2 ANKRD13D GPN2

8.03e-06127252739fa20a55de3af1a62ab5dfa4877879db3935ac2
ToppCellCOVID-19-kidney-PCT-S1/S2|COVID-19 / Disease (COVID-19 only), tissue and cell type

CYP4A11 OR2T11 HNF4G SLC22A6 ALDOB PCLO PAPPA SLC4A4

8.14e-06178252823a12d3d971b857d5be8e907334d1f6b49eeeb32
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Renal_corpuscle_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PHYHIP PARD6G DOCK5 LRFN2 TMEM266 TOGARAM2 GRIN2B TGFBR3

8.48e-0617925287394e77e665bf16d3733df91bb12907be460ab44
ToppCellControl-Epithelial_cells-Airway_goblet|Control / group, cell type (main and fine annotations)

HNF4G INPP4B PTPRR MGAM2 MUC16 TSPAN1 STS DLEU7

1.04e-051842528d92a71441e4e19f8c301999d8186f8e48e3cd162
ToppCellfacs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

EPHA6 NLGN3 ASB5 KEL SZT2 FAT3 GRIN2B TNR

1.12e-051862528bdc87e4631a8ea73e262e541aa84a28f24c94b00
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-hematologic|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CYP4A11 ITIH1 ITIH2 FECH KEL ALDOB CPS1 HBB

1.17e-051872528edb0ab0154542b1c0b3a2c216c4a60f0f06290b3
ToppCell356C-Fibroblasts-Fibroblast-E|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

PARD6G NLGN3 KIDINS220 FAM186A HPS4 ANKRD13D CPS1

1.26e-051362527edfd453c9a650d69d05a5a3ab15f7df56349fa86
ToppCell356C-Fibroblasts-Fibroblast-E-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

PARD6G NLGN3 KIDINS220 FAM186A HPS4 ANKRD13D CPS1

1.26e-05136252703e4e2353c23ceffde35b2d0aadd15299e3db09f
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-hematologic-erythrocytic|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CYP4A11 ITIH1 ITIH2 FECH KEL ALDOB CPS1 HBB

1.26e-0518925287899af78b273d9c7f029d52f7e0cf6df4da41f5e
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-hematologic-erythrocytic-erythrocyte|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CYP4A11 ITIH1 ITIH2 FECH KEL ALDOB CPS1 HBB

1.31e-051902528a34293601aefe5fb5c400c14091294b9ddaa195b
ToppCell3'-Airway_Nasal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CCNO ALDH3A1 ALDH3B1 CPLANE1 ANK3 FOXN4 MUC16 TSPAN1

1.31e-0519025282fdc024d3d673a0134b74b4c5a63afe924995730
ToppCellsevere-low-quality_cells|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

INPP4A USP9Y INPP4B N4BP2L2 ALK ANK3 FRYL LRBA

1.47e-0519325289337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCellsystemic_lupus_erythematosus-flare-Lymphocytic-lymphocyte-male|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

KNTC1 SBF1 GNE NLRP1 SPECC1L APPL2 SASS6 SLC4A4

1.52e-0519425288f4b63b0b9a40765205e4ca6bd94a675a83dbe3d
ToppCell10x_3'_v2v3-Non-neoplastic-Glial-Neuronal-Oligodendrocyte-Oligodendrocyte-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

TMEM144 FMNL2 KLHL32 DOCK5 GJB1 CNTN2 KIF13B ANK3

1.70e-05197252882b8e22317cad6d3786bd70d91107007c0ccd7cd
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Neuronal-ventral_progenitors_and_neurons_1|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

MYCBP2 MAP1LC3A LAMP5 KIDINS220 ANK3 GPR26 PCLO GRIN2B

1.70e-0519725284961f66606f08e399508fd6cabca588e7ab406a8
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

USP9Y LPIN1 RBM25 N4BP2L2 ANK3 FRYL TGFBR3 LRBA

1.83e-051992528f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellControl-Control-Myeloid-Neutrophil|Control / Disease, condition lineage and cell class

LRRK2 IQGAP1 DOCK5 MAP1LC3B2 PPP4R1 AHCTF1 NLRP1 NUAK2

1.89e-05200252895c41f147a1594d49e73cb56d86d301c3115ce20
ToppCellMacroglial-Oligodendrocytes-OPALIN--|Macroglial / cells hierarchy compared to all cells using T-Statistic

TMEM144 PRR5L PSEN1 DOCK5 CNTN2 KIF13B ANK3 FRYL

1.89e-05200252826b989e30bbbaf30904ced03f6aae3dea25c732c
ToppCellMacroglial-Oligodendrocytes-OPALIN---|Macroglial / cells hierarchy compared to all cells using T-Statistic

TMEM144 PRR5L PSEN1 DOCK5 CNTN2 KIF13B ANK3 FRYL

1.89e-0520025281314664c1721e9ecb1e2c3482a039044b0fe50a9
ToppCellMacroglial-Oligodendrocytes-OPALIN|Macroglial / cells hierarchy compared to all cells using T-Statistic

TMEM144 PRR5L PSEN1 DOCK5 CNTN2 KIF13B ANK3 FRYL

1.89e-0520025285f75a9b8bcd49d9bbb1e9ce2de730eaec96369ca
ToppCellMacroglial-Oligodendrocytes|Macroglial / cells hierarchy compared to all cells using T-Statistic

TMEM144 PRR5L PSEN1 DOCK5 CNTN2 KIF13B ANK3 FRYL

1.89e-0520025284dbac2f2587e87ca5a0622f50439bb5447e93c7f
ToppCellMacroglial-Oligodendrocytes-OPALIN-|Macroglial / cells hierarchy compared to all cells using T-Statistic

TMEM144 PRR5L PSEN1 DOCK5 CNTN2 KIF13B ANK3 FRYL

1.89e-0520025288b229f095fc113aecfc94b64862a9e0fdcc363ce
ToppCellMacroglial-Oligodendrocytes-OPALIN----L1-6|Macroglial / cells hierarchy compared to all cells using T-Statistic

TMEM144 PRR5L PSEN1 DOCK5 CNTN2 KIF13B ANK3 FRYL

1.89e-052002528272909f4354f3ae22e2b2f8f35970e6b0e92cfe2
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Renal_corpuscle_epithelial_cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

TOPAZ1 PHYHIP PARD6G LAMP5 DOCK5 TMEM266 TGFBR3

2.93e-05155252790e629681a72baacc7981b82883866a487638dbc
ToppCelldroplet-Liver-nan-3m-Epithelial-nan|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ITIH1 ITIH2 GJB1 ALDOB CPS1 NIPAL1 CTH

3.18e-051572527b72c6a1ed17bfc32d9dec193d934ea82e80b6bd5
ToppCellsaliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c09-GZMK-FOS_l|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)

FOXI3 NSUN2 INPP4B POLR3D LRBA MTREX IL2RB

3.44e-05159252703d77e7fee40262bf0942aab96b273f1c4f5d8e3
ToppCelldroplet-Liver-HEPATOCYTES-1m-Epithelial-Hepatocyte_(Pericentral_and_Periportal)|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ACACB ITIH1 ITIH2 LPIN1 GJB1 ALDOB SLC39A4

4.36e-051652527d449a568664a81d9b5538e8f409301448a32ac37
ToppCellHippocampus-Neuronal-Inhibitory-iN2(Gad1Gad2)-Phlda1-Inhibitory_Gad1Gad2_Htr3a.Phlda1_(Interneuron,__(candidate_CGE-derived_3))|Hippocampus / BrainAtlas - Mouse McCarroll V32

PCDHGA4 CPS1 TSPAN1 PRSS50 NIPAL1

4.76e-05702525511ca39208a8a0efd24cca47270083d5024e6972
ToppCellHippocampus-Neuronal-Inhibitory-iN2(Gad1Gad2)-Phlda1-Inhibitory_Gad1Gad2_Htr3a.Phlda1_(Interneuron,__(candidate_CGE-derived_3))-|Hippocampus / BrainAtlas - Mouse McCarroll V32

PCDHGA4 CPS1 TSPAN1 PRSS50 NIPAL1

4.76e-057025250f1dba07a2cd974a25239ae1728cfb007a37954c
ToppCellHippocampus-Neuronal-Inhibitory-iN2(Gad1Gad2)-Phlda1|Hippocampus / BrainAtlas - Mouse McCarroll V32

PCDHGA4 CPS1 TSPAN1 PRSS50 NIPAL1

4.76e-05702525c579fd093d30a5ee56f7cf1039120d00a6369649
ToppCelldroplet-Liver-HEPATOCYTES-1m-Epithelial|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ITIH1 ITIH2 LPIN1 GJB1 GJB2 ALDOB H6PD

4.89e-051682527b98af4043dfa5dfa4413e482879fad88de484675
ToppCelldroplet-Liver-HEPATOCYTES-1m-Epithelial-hepatocyte|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ITIH1 ITIH2 LPIN1 GJB1 GJB2 ALDOB H6PD

4.89e-051682527073b53d4cee6bc8c5c6fce51cf6cd9c316478f69
ToppCelldroplet-Liver-HEPATOCYTES|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ITIH1 ITIH2 LPIN1 GJB1 GJB2 ALDOB H6PD

5.07e-051692527f195467438c589f87224bde7da720dea072d110c
ToppCelldroplet-Liver-HEPATOCYTES-1m|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ITIH1 ITIH2 LPIN1 GJB1 GJB2 ALDOB H6PD

5.07e-0516925277785cab967a33560830c394c918d6ce625103858
ToppCellfrontal_cortex-Non-neuronal-leptomeningeal_cell|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

LAPTM4A GJB6 ITIH2 SLC22A6 GJB2 HSPG2 TGFBR3

5.46e-0517125272e43fb129ee9bdc3b31febc43c10f959bf0f4a7d
ToppCellfrontal_cortex-Non-neuronal-leptomeningeal_cell-VLMC|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

LAPTM4A GJB6 ITIH2 SLC22A6 GJB2 HSPG2 TGFBR3

5.46e-051712527e219a1aa59a96e4bc3e2eacf985679174a51de41
ToppCellCOVID-19-Heart-Neuronal|Heart / Disease (COVID-19 only), tissue and cell type

GPR155 DOCK5 INSC ALK ANK3 CST5 PAPPA

5.88e-0517325276fb5f9e6536a5d57fd8e6657b494047a2d0bc9c7
ToppCellAdult-Epithelial-lung_goblet_cell-D231|Adult / Lineage, Cell type, age group and donor

CCNO HNF4G PTPRR MUC16 TSPAN1 ASXL3 SLC4A4

6.10e-0517425277d2f802f493f19a068e097b2909a9000e2160266
ToppCell3'-Broncho-tracheal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DCDC1 ARMC3 CCNO KLHL32 DYNC2H1 MUC16 TSPAN1

6.55e-051762527dee780cfa85234a7cd7bf440b66b84cec959893e
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Pvalb-Pvalb_Akr1c18_Ntf3|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

PCTP CAPS2 LAMA3 CPS1 CCNB1IP1

6.64e-057525255edf024797a6dd9cbf9916a503194e29e0152d6c
ToppCellAdult-Epithelial-lung_goblet_cell|Adult / Lineage, Cell type, age group and donor

CCNO HNF4G PTPRR INSC MUC16 TSPAN1 SLC4A4

7.29e-0517925271fc1f252ca943a2f649d1e627f56acbf15f8e058
ToppCellCiliated_cells-A-Donor_07|World / lung cells shred on cell class, cell subclass, sample id

ARMC3 CCNO WDR90 ALDH3A1 TOGARAM2 MUC16 TSPAN1

7.55e-051802527d9be152773fe9f2160edad9246fa03c03afeafd6
ToppCellnucseq-Epithelial-Epithelial_Glandular-Goblet-Goblet|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CCNO HNF4G PTPRR MGAM2 MUC16 TSPAN1 STS

7.55e-051802527668a2d8e1d5a390309d5eb62c836f5903144bea9
ToppCellfacs-Marrow-B-cells-18m-Hematologic-MPP_Fraction_B_+_C|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ACACB KIAA0232 PARD6G ST7L DNAAF5 SBF1 GEMIN4

7.55e-0518025277368ab31c3273374ef260f0d710d4eea83cbc4a2
ToppCellnucseq-Epithelial-Epithelial_Glandular-Goblet|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CCNO HNF4G PTPRR MGAM2 MUC16 TSPAN1 STS

7.55e-0518025273dc80bc636bf0e6ffc9762853132a9fe59fd1f66
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Renal_corpuscle_epithelial_cell-glomerular_visceral_epithelial_cell-Podocyte|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PHYHIP PARD6G DOCK5 TMEM266 TOGARAM2 GRIN2B TGFBR3

7.81e-0518125275bf7aa43f6e6ecce15c95928b91195544d6928c4
ToppCellCOVID-19-kidney-Stressed_PCT|COVID-19 / Disease (COVID-19 only), tissue and cell type

CYP4A11 OR2T11 HNF4G SLC22A6 ALDOB PCLO SLC4A4

7.81e-0518125276980ea624151da32b7f537f263e40fcb87a02e81
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Renal_corpuscle_epithelial_cell-glomerular_visceral_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PHYHIP PARD6G DOCK5 TMEM266 TOGARAM2 GRIN2B TGFBR3

7.81e-0518125278e751f5d7cd2d328ec0196d874e8a507e8c4e1a9
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Renal_corpuscle_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PHYHIP PARD6G DOCK5 LRFN2 TMEM266 TOGARAM2 TGFBR3

8.37e-051832527848fc6dd129150897ee339343e83c645b6e779eb
ToppCellfacs-Liver-Hepatocytes-24m|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ACADS ITIH1 MIA2 H6PD LDLR SLC22A18 SLC4A4

8.37e-051832527d0721c6aa426953a520d40e976b6e65aa7ca65e8
ToppCellLPS-antiTNF-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LRRK2 ITGA9 ANK3 LAMA3 LDLR TENM4 SLC4A4

8.66e-051842527ab2f06906fc7a9931dfa0864ef506832b07fb93e
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ITGA9 INSC ANK3 TGFBR3 TENM4 PAPPA SLC4A4

8.96e-0518525273b2dfc8f4c87be516265dbecfc251276034d0efd
ToppCellPrimary_Motor_Cortex_(M1)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1_LAMP5_NDNF|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

EPHA6 LAMP5 INPP4B CER1 ALK LAMA3 ADARB2-AS1

9.26e-051862527310d16f4e5cffee3ea6d7635508c513a3b92131e
ToppCellSubstantia_nigra-Neuronal|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

MYCBP2 PHYHIP STXBP1 GPR26 PCLO DNM1L GRIN2B

9.26e-0518625273f889083fcffe516388e9b03a5e23af2010ced33
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LRRK2 ITGA9 ANK3 LAMA3 LDLR TENM4 SLC4A4

9.26e-051862527e83718fabb057100835d3357df407f283d23fe16
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

LRRK2 OR2T11 HNF4G MIA2 MICAL3 PAPPA CUX1

9.58e-0518725279d77ca45f7563bd6f2a0c1be5d99d93ad30983f7
ToppCellfacs-Pancreas-Exocrine-24m-Endothelial|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SPTLC3 GJB6 ALDH3A1 ALDOB HTR5A GPR26

9.72e-0513025263b6a8eaef593db73c2fad2260b9f1e15950ccb70
ToppCellfacs-Pancreas-Exocrine-24m-Endothelial-nan|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SPTLC3 GJB6 ALDH3A1 ALDOB HTR5A GPR26

9.72e-0513025268c81853c806e9a0d562e00dc5e00a8fc569a854c
ToppCellfacs-Pancreas-Exocrine-24m-Endothelial-endothelial_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SPTLC3 GJB6 ALDH3A1 ALDOB HTR5A GPR26

9.72e-0513025263041d20fe964d282d95c0312396f26bc93929056
ToppCell-Unknown-Endothelial-Myofibroblast| / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LRRK2 FMNL2 ANK3 PCDHGB5 SPECC1L TGFBR3 KIF13A

9.90e-0518825276468fa95ad0395395301115286f2d8c0df5d3882
ToppCell-Unknown-Endothelial| / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LRRK2 FMNL2 ANK3 PCDHGB5 SPECC1L TGFBR3 KIF13A

9.90e-0518825277a81ac5c79c3eb26639b52d2b9fd5e7ef9798fd6
ToppCell-Unknown| / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

LRRK2 FMNL2 ANK3 PCDHGB5 SPECC1L TGFBR3 KIF13A

9.90e-0518825279cb718bfe1358c6fd842f096e228eb0abb9aefc6
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

CYP4A11 HNF4G SLC22A6 MIA2 ALDOB SLC4A4 CUX1

9.90e-051882527f3edcefeef2ce19086032d98b243c02a6d542b38
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

USP9X RBM25 AHCTF1 HUWE1 LDLR LRBA SPEN

9.90e-051882527ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCellfacs-Trachea-24m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l32-30|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KIAA0232 TRPC1 LRRK2 PCDHGB5 FRYL NIPAL1 CUX1

9.90e-051882527c2febf9fd4632af1f922067c3a30e5c50f75f480
ToppCellControl-Epithelial_cells|Control / group, cell type (main and fine annotations)

LRRK2 DOCK5 PPP4R1 ANK3 LAMA3 LDLR SLC4A4

9.90e-051882527707ebf76cc6fb600b2f07793cf4ea9482c0de79d
ToppCellCOPD-Epithelial-Ciliated|Epithelial / Disease state, Lineage and Cell class

DCDC1 ARMC3 KLHL32 ULK4 DYNC2H1 TOGARAM2 TSPAN1

1.02e-0418925273e77883db34722b9ce0a03ea74caefc92dc7feff
ToppCelldroplet-Lung-30m-Hematologic-lymphocytic-Proliferating_T_cell|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KNTC1 INPP4B GJB1 KNL1 CTLA4 CDC25B IL2RB

1.06e-04190252708420f0ecd2c62e102371d16dcb8eda0d510e92a
ToppCelldroplet-Lung-30m-Hematologic-lymphocytic-Proliferating_T_cell-proliferating_T|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KNTC1 INPP4B GJB1 KNL1 CTLA4 CDC25B IL2RB

1.06e-041902527f5a8b44d9948a16e2d5284c78d8f7ed422ac623a
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1_LAMP5_NDNF|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

EPHA6 LAMP5 INPP4B CER1 ALK LAMA3 ADARB2-AS1

1.09e-0419125277b386512284dfaa0e95358b28ee82632ee965e64
ToppCellnucseq-Epithelial-Epithelial_Airway|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

DCDC1 ARMC3 KLHL32 DYNC2H1 TOGARAM2 MUC16 TSPAN1

1.09e-0419125271c528f72c9ef3ef3a850b05e4a9715190832270c
ToppCellsystemic_lupus_erythematosus-treated-Lymphocytic_B-B_mem-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

GGA2 PP2D1 FAM186A MICAL3 DNAH8 TRIM38 HBB

1.13e-04192252780a71ab3434076803466ccac0df73468889c7dd3
ToppCellsystemic_lupus_erythematosus-treated-Lymphocytic_B-B_mem|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

GGA2 PP2D1 FAM186A MICAL3 DNAH8 TRIM38 HBB

1.13e-04192252775ce635d669ff77d1fd54e10467f21d5e5d67b08
ToppCellFetal_29-31_weeks-Mesenchymal-myofibroblast_cell-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

SPTLC3 ITGA9 INSC FAT3 TENM4 SLC4A4 DISP1

1.13e-04192252772881b280a415e65f87a80ca1369cbb0b722a0c4
ToppCellControl-Epithelial-Ciliated|Epithelial / Disease state, Lineage and Cell class

DCDC1 ARMC3 KLHL32 ULK4 DYNC2H1 TOGARAM2 TSPAN1

1.17e-0419325270e37d454f3735edd936ee9a5f5f516ac3aad400e
ToppCellTCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6|TCGA-Prostate / Sample_Type by Project: Shred V9

USP9X USP38 PDS5A CPLANE1 FRYL HUWE1 PRKDC

1.17e-041932527abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DCDC1 ARMC3 ULK4 WDR90 DYNC2H1 TOGARAM2 MUC16

1.20e-0419425274a2c127c90d1fefe604fcb9e796577d21b489dd6
ToppCellwk_20-22-Epithelial-Proximal_epithelial-MUC16+_ciliated|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

DCDC1 ARMC3 ALDH3B1 CCDC33 TOGARAM2 MUC16 TSPAN1

1.20e-041942527756082a0f5953b52229bb60d40b84701cb6cb23d
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_secretory-Secretory_Club|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

LRRK2 ITGA9 NOD1 PTPRR ANK3 ADARB2-AS1 ACCSL

1.28e-041962527ed76eeb37400ca154feae9b7ebaddb6c434f8b81
ToppCell3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DCDC1 ULK4 WDR90 CAPS2 CPLANE1 DYNC2H1 TOGARAM2

1.32e-04197252774a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCellfacs-Aorta-Heart-3m-Myeloid-nan|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GJB2 FECH USH2A FAT3 PRSS50 CDC25B

1.40e-04139252622a769d5195ed761ef333ef542746e1ba617a698
DrugSulfadimethoxine [122-11-2]; Up 200; 12.8uM; MCF7; HT_HG-U133A

CCNO EML2 DOCK5 FBXO9 MIA2 SZT2 MED16 TMEM39B VPS13D STS RBM5 SLC4A4 KIF13A

2.68e-07196249133441_UP
DrugSulfaguanidine [57-67-0]; Down 200; 18.6uM; PC3; HT_HG-U133A

TRAF6 GGA2 ACACB LPIN1 NOD1 PDS5A HSPG2 PCLO PPP4R3B STS SLC4A4 CTSO

1.81e-06196249124257_DN
DrugNitrofural [59-87-0]; Down 200; 20.2uM; MCF7; HT_HG-U133A

GGA2 ACADS CCNO LPIN1 NOD1 MIA2 ANK3 DYNC2H1 DTNA TSPAN1 PPP4R3B

1.07e-05195249113320_DN
DrugSTOCK1N-35696; Up 200; 15uM; PC3; HT_HG-U133A

GGA2 EML2 PSMD13 HIRA RBM25 HPS4 SUPT20H PPM1A RBM5 ELF1 CTH

1.18e-05197249116564_UP
DrugUrapidil hydrochloride [64887-14-5]; Up 200; 9.4uM; MCF7; HT_HG-U133A

GGA2 CCNO EML2 LPIN1 SBF1 HPS4 MICAL3 DYNC2H1 DTNA UTP25 RBM5

1.23e-05198249115295_UP
DrugPiracetam [7491-74-9]; Down 200; 28.2uM; HL60; HG-U133A

GGA2 EML2 PCTP FOCAD CER1 PNPLA6 SUPT20H MED16 HIPK2 SLC39A4 CUX1

1.35e-05200249111710_DN
Diseaseaspartate aminotransferase measurement

POLR2M ST7L ITGA9 ITIH1 INPP4B STN1 LPIN1 GLB1 PTPRR NUP37 FECH GCN1 CNTN2 B3GNTL1 ATG7 NIPAL1 ELF1 CTLA4 LRBA SLC4A4

5.60e-0590424020EFO_0004736
Diseasearylamine N-acetyltransferase 1 measurement

ITIH1 ITIH2

6.59e-0522402EFO_0801394
Diseasesodium channel subunit beta-2 measurement

ITIH1 ITIH2

6.59e-0522402EFO_0803085
Diseaseautosomal recessive nonsyndromic deafness 1A (is_implicated_in)

GJB6 GJB2

6.59e-0522402DOID:0110475 (is_implicated_in)
DiseaseKeratitis-Ichthyosis-Deafness Syndrome

GJB6 GJB2

6.59e-0522402C3665333
DiseaseSenter syndrome

GJB6 GJB2

6.59e-0522402C0265336
Diseaseautosomal recessive nonsyndromic deafness 1A (implicated_via_orthology)

GJB6 GJB2

6.59e-0522402DOID:0110475 (implicated_via_orthology)
DiseaseDFNA 3 Nonsyndromic Hearing Loss and Deafness

GJB6 GJB2

6.59e-0522402cv:CN043589
DiseaseDEAFNESS, AUTOSOMAL RECESSIVE 1A

GJB6 GJB2

1.97e-0432402220290
Diseasebutyrylglycine measurement

ACADS CPS1

1.97e-0432402EFO_0800208
DiseaseDEAFNESS, X-LINKED 2

GJB6 GJB2

1.97e-0432402304400
DiseaseDeafness, autosomal dominant nonsyndromic sensorineural 3

GJB6 GJB2

1.97e-0432402cv:
DiseaseDEAFNESS, DIGENIC, GJB2/GJB6 (disorder)

GJB6 GJB2

1.97e-0432402C2673760
DiseaseDEAFNESS, DIGENIC, GJB2/GJB3 (disorder)

GJB6 GJB2

1.97e-0432402C2673761
DiseaseDEAFNESS, AUTOSOMAL RECESSIVE 1A (disorder)

GJB6 GJB2

1.97e-0432402C2673759
DiseaseX-linked mixed hearing loss with perilymphatic gusher

GJB6 GJB2

1.97e-0432402cv:C1844678
DiseaseProgressive hearing loss stapes fixation

GJB6 GJB2

1.97e-0432402C1844678
DiseaseAutosomal recessive nonsyndromic hearing loss 1A

GJB6 GJB2

1.97e-0432402cv:C2673759
Diseaseresponse to methotrexate

PRR5L INPP4B SPECC1L

2.75e-04162403GO_0031427
DiseaseCorneal Opacity

GLB1 SLC4A4

3.91e-0442402C0010038
DiseaseOther License Status

TSC2 HBB

3.91e-0442402C3889261
Diseaseautoimmune thyroiditis (biomarker_via_orthology)

GJB1 GJB2

3.91e-0442402DOID:7188 (biomarker_via_orthology)
Diseaseosteopontin measurement

CXXC1 ITIH2

3.91e-0442402EFO_0021776
Diseaseplatelet component distribution width

GAPVD1 ARMC3 KIAA0232 LRRK2 ST7L INPP4B DOCK5 MIA2 N4BP2L2 PDS5A SUPT20H DNM1L CPS1 TLN1 DLEU7 CUX1

4.99e-0475524016EFO_0007984
Diseasehypertension (biomarker_via_orthology)

CYP4A11 MAP1LC3A HSPG2 ATG7 CPS1 CYP4A22 STS SLC4A4

5.72e-042272408DOID:10763 (biomarker_via_orthology)
DiseaseBipolar Disorder

ACADS ITGA9 ITIH1 ULK4 DNAH8 ANK3 HTR5A PCLO GRIN2B TENM4 CTLA4 IL2RB

5.82e-0447724012C0005586
DiseaseHidrotic Ectodermal Dysplasia

GJB6 GJB2

6.48e-0452402C0162361
Diseasemuscular disease (implicated_via_orthology)

ACACB NMT1

6.48e-0452402DOID:0080000 (implicated_via_orthology)
Diseasesingle Ig IL-1-related receptor measurement

ITIH1 ITIH2

6.48e-0452402EFO_0802072
Diseasecognitive function measurement, self reported educational attainment

MYCBP2 ITIH1 RBM25 QARS1 KNL1 DMXL2 TCF20 PKD1L3 CSE1L RBM5

7.06e-0435524010EFO_0004784, EFO_0008354
DiseaseOvarian Serous Adenocarcinoma

LRRK2 TRRAP ALK

8.34e-04232403C1335177
Diseasemean arterial pressure

DCDC1 ST7L HNF4G STN1 PDS5A NMT1 TCF20 ATG7 SZT2 HIPK2 UTP25 LRBA

8.60e-0449924012EFO_0006340
DiseaseWest Syndrome

TSC2 STXBP1 GRIN2B

9.48e-04242403C0037769
DiseaseSjogren-Larsson syndrome (implicated_via_orthology)

ALDH3A1 ALDH3B1

9.67e-0462402DOID:14501 (implicated_via_orthology)
DiseaseX-14939 measurement

CYP4A11 CYP4A22

9.67e-0462402EFO_0800747
Diseasediastolic blood pressure, social deprivation

ST7L ULK4

9.67e-0462402EFO_0006336, EFO_0009696
Diseasecontactin-2 measurement

CNTN2 NUAK2

9.67e-0462402EFO_0008100
Diseasemental development measurement

PCDHGB5 DTNA PCDHGA4

1.07e-03252403EFO_0008230
Diseaseneurodegenerative disease (implicated_via_orthology)

UBR1 GGA2 TRPC1 LRRK2 PNPLA6 CCS

1.23e-031452406DOID:1289 (implicated_via_orthology)
DiseaseLDL cholesterol change measurement

PKD1L3 LDLR

1.35e-0372402EFO_0007804
Diseaseinter-alpha-trypsin inhibitor heavy chain H1 measurement

ITIH1 ITIH2

1.35e-0372402EFO_0801705
Diseaseamino acid measurement

PRR5L DCDC1 ACACB HNF4G PTPRR ULK4 ALK MGAM2 COG7 GRIN2B CPS1 TENM4 PRKDC LRBA

1.42e-0367824014EFO_0005134
Diseaseautism spectrum disorder (implicated_via_orthology)

TRPC1 TSC2 NLGN3 LRFN2 TCF20 LRBA

1.57e-031522406DOID:0060041 (implicated_via_orthology)
Diseasehelix rolling

FECH LRBA

1.79e-0382402EFO_0007670
Diseaseglycosyl-N-(2-hydroxynervonoyl)-sphingosine (d18:1/24:1(2OH)) measurement

CPS1 NIPAL1

1.79e-0382402EFO_0800533
Diseasetriacylglycerol 58:6 measurement

TRAF6 PRR5L

1.79e-0382402EFO_0010440
Diseaseunipolar depression, bipolar disorder

ACADS ANK3 PCLO TUBGCP6 TENM4 ASXL3

1.79e-031562406EFO_0003761, MONDO_0004985
DiseaseAge-related nuclear cataract

FOCAD BICRA SLC4A4

2.02e-03312403HP_0011142
Diseasefear of minor pain measurement

EPHA6 DOCK5 SLC39A4

2.02e-03312403EFO_0008340
DiseaseCiliopathies

TSC2 CPLANE1 USH2A DNAH8 DYNC2H1

2.09e-031102405C4277690
Diseasefish oil supplement exposure measurement, triglyceride measurement

GJB6 GJB2

2.84e-03102402EFO_0004530, EFO_0600007
Diseaseaxin-2 measurement

ITIH1 MED16

2.84e-03102402EFO_0801400
Diseaseglucagon-like peptide-1 measurement

ULK4 BICRA

2.84e-03102402EFO_0008465
Diseasevitamin D-binding protein measurement

ITIH1 MED24 SLC4A4

3.11e-03362403EFO_0005675
Diseaseautosomal recessive polycystic kidney disease (biomarker_via_orthology)

CYP4A11 CYP4A22

3.45e-03112402DOID:0110861 (biomarker_via_orthology)
DiseaseCleft palate, tobacco smoke exposure measurement, cleft lip, parental genotype effect measurement

FOCAD ANK3

3.45e-03112402EFO_0003959, EFO_0005939, EFO_0009115, HP_0000175
Diseasecarnitine measurement

ACADS ANK3 CPS1 LDLR

3.46e-03762404EFO_0010469
DiseaseManic

ITIH1 DNAH8 ANK3 TENM4

3.80e-03782404C0338831
Diseaseovarian reserve

ITIH2 GRIN2B

4.12e-03122402EFO_0004770
Diseaseouter ear morphology trait

LRBA CUX1

4.12e-03122402EFO_0007664
Diseasecardiovascular disease

DCDC1 HNF4G CER1 USP38 NMT1 ATG7 HIPK2 LDLR OR10AD1 DLEU7

4.45e-0345724010EFO_0000319
DiseaseCutaneous Melanoma

TRRAP ALK CUX1

4.51e-03412403C0151779
Diseaseclinical treatment

MYCBP2 GRIN2B CTLA4

4.51e-03412403EFO_0007056
DiseaseCombined immunodeficiency

RECQL4 CTLA4 PRKDC

4.51e-03412403C0494261
DiseaseEpilepsy, Cryptogenic

TSC2 STXBP1 GRIN2B ASXL3

4.55e-03822404C0086237
DiseaseAwakening Epilepsy

TSC2 STXBP1 GRIN2B ASXL3

4.55e-03822404C0751111
DiseaseAura

TSC2 STXBP1 GRIN2B ASXL3

4.55e-03822404C0236018
DiseaseDEAFNESS, AUTOSOMAL RECESSIVE (disorder)

GJB2 DMXL2

4.84e-03132402C1846647
DiseaseAutism Spectrum Disorders

NSUN2 NLGN3 USH2A GRIN2B

5.17e-03852404C1510586
Diseasewaist-hip ratio

KNTC1 FOXK2 PRR5L MYCBP2 ITGA9 KLHL32 LRFN2 KIDINS220 CLDN20 CNTN2 KNL1 DMXL2 ANK3 ATG7 DYNC2H1 GRIN2B H6PD DLEU7 CUX1

5.67e-03122624019EFO_0004343
DiseaseAutosomal recessive primary microcephaly

KNL1 SASS6

6.45e-03152402cv:C3711387
DiseaseRhabdomyosarcoma

ALK SLC22A18

6.45e-03152402C0035412
Diseaseurate measurement

NCOA6 DCDC1 HNF4G CXXC1 INPP4B SLC22A6 USP38 TMEM266 QARS1 CNTN2 DTNA CPS1 GOLPH3L NIPAL1 HBB

6.84e-0389524015EFO_0004531
Diseaseneuroticism measurement, cognitive function measurement

EML2 MAP1LC3A HNF4G MED24 RBM25 GPR26 PCLO PKD1L3 CSE1L ASXL3 TNR

6.97e-0356624011EFO_0007660, EFO_0008354
Diseasecortical surface area measurement

DCDC1 MYCBP2 EML2 ST7L FMNL2 STN1 FOCAD USP38 USP35 QARS1 CCDC33 ANK3 FAT3 HIPK2 FRYL DNAAF9 CPS1 PAPPA CTSO CUX1

7.13e-03134524020EFO_0010736
Diseasetype 2 diabetes mellitus (biomarker_via_orthology)

NCOA6 TRPC1 MAP1LC3A ALDOB DNM1L

7.17e-031472405DOID:9352 (biomarker_via_orthology)
DiseaseSpondyloepiphyseal Dysplasia

GLB1 HSPG2

7.33e-03162402C0038015
DiseaseSchwartz-Jampel Syndrome

GLB1 HSPG2

7.33e-03162402C0036391
DiseaseSpondyloepiphyseal Dysplasia Tarda, X-Linked

GLB1 HSPG2

7.33e-03162402C3541456
DiseaseSchwartz-Jampel Syndrome, Type 1

GLB1 HSPG2

7.33e-03162402C4551479
DiseaseMelnick-Needles Syndrome

GLB1 HSPG2

7.33e-03162402C0025237
Diseaseprimary autosomal recessive microcephaly (is_implicated_in)

NUP37 KNL1

7.33e-03162402DOID:0070296 (is_implicated_in)
DiseaseConventional (Clear Cell) Renal Cell Carcinoma

LRRK2 TSC2 INPP4B GJB1 ALK

7.37e-031482405C0279702
Diseasebipolar disorder

INPP4A ITIH1 INSC DOCK2 TCF20 ANK3 BICRA PCLO HUWE1 TENM4 CDC25B

8.00e-0357724011MONDO_0004985

Protein segments in the cluster

PeptideGeneStartEntry
LSMKSLPDSNRTHVI

ACCSL

376

Q4AC99
MTVRAQLAPSATKLH

BPIFB3

381

P59826
QTIHQLTSSPEDILM

ADAL

71

Q6DHV7
VLHAVASMVSAPLET

C16orf86

166

Q6ZW13
DMVVAPVTHVSVTLD

ELF1

131

P32519
LIQMSAVPLEHGEVI

COG7

371

P83436
QVTPIIDLMAISNAH

ANKRD13D

376

Q6ZTN6
QVMIDHLSRAVISDP

CAPS2

231

Q9BXY5
IIIEQPSALTHSMDL

CCDC33

911

Q8N5R6
INSTSLTHMLPVQIC

CCNO

326

P22674
LPVTNEMVHNLVAIE

DNM1L

476

O00429
SVELPETHQMLLQTC

ACADS

31

P16219
VPTSNEMETETLHLV

ADGRG4

1901

Q8IZF6
PEQVAMATVTALHRT

ALDOB

246

P05062
HSALSIQELVAMSPE

CUX1

1111

P39880
VMTAAAKHLTPVTLE

ALDH3B1

196

P43353
IMTAAAKHLTPVTLE

ALDH3A1

196

P30838
SLAELPAIMTHASVL

CTH

346

P32929
SPLEVFQHVSLMTLD

CYP4A11

181

Q02928
IMAHQPTDVESTLLQ

SPECC1L

231

Q69YQ0
PTAVEDALMSVLTSH

ADARB2-AS1

41

A8MUL3
MHAIISPLRSANTVV

ARMC3

441

Q5W041
SVLVTHAELMPDQTA

DMXL2

326

Q8TDJ6
LIFVSTPALLVAMHV

GJB2

81

P29033
TMHLPLNCTELSSVI

CER1

216

O95813
MEANVPAVLTHSELS

DISP1

1501

Q96F81
VAVTDSLVAHPTVAM

ASXL3

1401

Q9C0F0
LSLPIHVQAARATMV

CLDN20

71

P56880
LIPILAVMESHAIQV

POLN

431

Q7Z5Q5
THPELSVAVEMLSSV

IQGAP1

446

P46940
QAMEILTQLSHTQPT

MROH7

481

Q68CQ1
HSSPQSILDDVAMVL

RBM25

801

P49756
MLSPNHTIVTEFILL

OR5M10

1

Q6IEU7
SHVLLLVQALPQISM

HSPG2

3566

P98160
EQLITPLVSLGHISM

PDS5A

771

Q29RF7
LEQMAESVLSLHVPR

INPP4A

246

Q96PE3
LLVNGHSMVSVSTPI

MAP1LC3B

81

Q9GZQ8
IMVVNHDASSIPRLQ

NSUN2

236

Q08J23
ERAQVVHLLSTMDSP

ACACB

2441

O00763
TTAPTHVLAMLILFS

FBXW10B

736

O95170
PPLSTETHISLQVMD

PCDHGA4

461

Q9Y5G9
AHPDTICLMVANTLI

PMPCB

306

O75439
HSEAKMISAIPTLAV

MUC16

11186

Q8WXI7
MRAQPSVVLSAAHTV

PNPLA6

616

Q8IY17
HLVSNPDLVLAVSMT

DCDC1

1221

M0R2J8
KMHISQSIEAPLTAT

DNAJC11

161

Q9NVH1
TTTIPQMLIHLVVRD

OR10AD1

76

Q8NGE0
ITVPQMLAVLLEHGA

OR9Q1

76

Q8NGQ5
MAIQSAPERKLTLSH

FOXI3

156

A8MTJ6
STVLEMRNAESHVVP

KIDINS220

1271

Q9ULH0
LSQVTVHLMASPTEE

KIAA0100

1386

Q14667
IHLEMESLVNSRTTP

MICAL3

496

Q7RTP6
TSLATMLHVELPHIN

GPN2

161

Q9H9Y4
ITPIETLNHPFVTMT

HIPK2

516

Q9H2X6
LATVAVVALSVMGHT

MYADML2

206

A6NDP7
LAISVTEEMLPIHQD

MAGEE2

321

Q8TD90
SMVADLQELPATIHS

LAMA3

1501

Q16787
HTQTPLLDLMSDALV

NMT1

426

P30419
ITATGLDSQTPHMVI

MGAM2

2446

Q2M2H8
ESLPELSNHASILIM

ITIH1

386

P19827
SILQMSLDHHIVTPL

ITIH2

611

P19823
PLVASISHQMVALQT

DLEU7

6

Q6UYE1
PLTINIPDTMAHLIS

FOXK2

181

Q01167
PHMLTTNLLIAQSIV

GPR155

411

Q7Z3F1
LLEAPQVMSLHVDTL

MMS19

941

Q96T76
LLMAILLTVEVTHPN

LAPTM4A

41

Q15012
LLTVEVTHPNSMPAV

LAPTM4A

46

Q15012
IREQMSESILSFHIP

INPP4B

251

O15327
LTATLHEPIMQLLVE

GAPVD1

196

Q14C86
ISLHEFPVEQMTRSL

HPS4

256

Q9NQG7
LISATLPHEILEMTN

EIF4A3

216

P38919
HILMTSAPNTITVLE

GLB1

606

P16278
VVTATETLALGIHMP

DDX60L

1271

Q5H9U9
MQTLVLLVDLHPSVR

GPR26

211

Q8NDV2
AEHAMTTPLQLTTSK

PCLO

2816

Q9Y6V0
MIHPVTGLLSTAQQL

FAT2

1186

Q9NYQ8
SVSEMSLLHALGPVQ

KIAA0232

26

Q92628
VVTVQAHAHLLQSPM

OR4Q3

46

Q8NH05
MIHNALRFIPVTSVV

NLRP1

1221

Q9C000
DVTLHVSASNPAMLL

KAT14

731

Q9H8E8
TTIVDVQLIAAMIHP

DNAH8

2561

Q96JB1
QSPHVVQSVISLIMG

FRYL

211

O94915
LLVTEVHLNRMQPSS

NOD1

426

Q9Y239
SPHALMLQDVKAVLT

LRBA

446

P50851
QEVIPMHLATSPILS

LPIN1

96

Q14693
VISSIVHFPDALEML

LRRK2

566

Q5S007
PVTTLTQTMHDLAGL

CDC25B

51

P30305
EITGMNTLLSAPIHT

KNL1

131

Q8NG31
MILSAVHIQPFDIIS

LAMP5

201

Q9UJQ1
MLEHVITLPSAAQTR

KNTC1

1576

P50748
SMESLAQTPLNHEVT

LRRC37B

311

Q96QE4
MGTVVPSLLHQDLAA

GGA2

361

Q9UJY4
LTEKAAPVMNVIHSI

TUBGCP6

1726

Q96RT7
APVMNVIHSIFSLVL

TUBGCP6

1731

Q96RT7
LAQEMLIISHHPSLV

GCN1

666

Q92616
LHVVRQMTDPNVALT

PSMD13

81

Q9UNM6
ILSLESEQVPLMSAH

NUP37

201

Q8NFH4
HSLLEMILENAVPGT

PCDHGB5

346

Q9Y5G0
MHVLTAPLLTNTSED

PPP4R3B

471

Q5MIZ7
SQPMVAAAVIVHLVT

PAPPA

1091

Q13219
LMRHQPTLKTDATTA

HUWE1

666

Q7Z6Z7
RNIAPHTVVDSIMTA

RBM5

236

P52756
LGPMSTLVHADQIST

HNF4G

356

Q14541
MIANSHNLIVTVKPA

PARD6G

236

Q9BYG4
ILLHVQPSMVQSLVE

MED16

491

Q9Y2X0
EPLQSQTHSVLSMVL

SBF1

326

O95248
QTHSVLSMVLDPELE

SBF1

331

O95248
SVTVPKMLANLLAHD

OR1K1

76

Q8NGR3
LQPALSEAKTVHSMV

PTPRR

276

Q15256
GSILVMVVLEPQLHS

OR12D3

41

Q9UGF7
SIVQMLLILQSVHEP

PRR5L

186

Q6MZQ0
LPTHLQSALMSTVVT

NCOA6

1616

Q14686
MSSVPAVIAKASAIH

OPN4

331

Q9UHM6
ELLQASLDPSVTHLM

ALPG

271

P10696
HVILARSTSMPQLGE

PCTP

131

Q9UKL6
SESLHDNTLVLMVPL

ITGA9

751

Q13797
ITMIPNSLVGLQTLH

NLGN3

811

Q9NZ94
VPAMAQLTLSSLAEH

QTRT2

56

Q9H974
LHDNILVSSMLESPI

DYNC2H1

91

Q8NCM8
LSVSDSLMTAHPIQA

APBB3

331

O95704
VHSGDATLMLPTQTI

CPS1

1201

P31327
MLHQTIQHDPLTTDL

CXXC1

636

Q9P0U4
LAVELMVSVLQHPEG

ATG7

586

O95352
HMSQTTISPLENAIE

DOCK2

1486

Q92608
QLIMSPLITSHVIGE

DOCK5

361

Q9H7D0
LGVVNILHTMNPSLV

GNE

651

Q9Y223
ILHTMNPSLVILSGV

GNE

656

Q9Y223
SVHPLQMTGLTDIAD

CPLANE1

2836

Q9H799
LESSQIHISVLPMEV

FBXO9

181

Q9UK97
LIFVSTPALLVAMHV

GJB6

81

O95452
SPLEVFQHVSLMTLD

CYP4A22

181

Q5TCH4
IVRISVTMSDNSHPK

FAT3

1656

Q8TDW7
RLMAPISLQVVHVET

IL2RB

131

P14784
LLFDMTTHPVTNTTE

GOLPH3L

181

Q9H4A5
LEDQMVLVHTTLPSQ

CCS

46

O14618
HTPLLLLTALMVAVA

CST5

6

P28325
SISQEPVMRTHLPVL

DNAAF9

716

Q5TEA3
SHIETAINLAIPGLM

DUSP7

86

Q16829
DVLVAALVMPLSLVH

HTR5A

86

P47898
NIMSNIVLTEHSAPT

ANK3

3801

Q12955
SSMVERILLQHEATP

ASB5

276

Q8WWX0
HLMVTSQSLRLIDPQ

APPL2

536

Q8NEU8
PGTVISHSVAMLILI

CNTN2

1021

Q02246
LILVSTPALLVAMHV

GJB1

81

P08034
QMLTPQLHAIIAASV

FMNL2

796

Q96PY5
MPTTHQIHVEQSISL

DTNA

96

Q9Y4J8
LPVTQHLSSFLESME

INSC

356

Q1MX18
TNIPGTVLTQDLTMH

KLF18

71

A0A0U1RQI7
LIPIREIMSHFTALQ

CASP10

371

Q92851
KAMHVAQPAVVLASS

CTLA4

36

P16410
MIIDSSRIPSFTQLH

C2orf66

1

Q6UXQ4
SDTMEQSIHETIPLV

AHCTF1

1686

Q8WYP5
LAIHPDMVTIATGQV

EML2

111

O95834
MVHLTPEEKSAVTAL

HBB

1

P68871
VNIAAASLMVHVVLP

HSDL1

176

Q3SXM5
ESLIGPLMQTISHQH

DNAAF5

206

Q86Y56
VTLTSEQTHALESPM

FAM186A

1661

A6NE01
VVILFSAHSLPMSVV

FECH

256

P22830
DMTVSQILLTQHGIP

HIRA

821

P54198
LHHMPTQLLSIEESL

POLR2M

296

P0CAP2
NHLTEVLTLVAMELP

H6PD

266

O95479
VLTLVAMELPHNVSS

H6PD

271

O95479
PMSVHLLNQGSSIVI

BICRA

446

Q9NZM4
PATRQMLIGTVLHEV

DNA2

151

P51530
IRMSIELQSVSNPVH

SASS6

26

Q6UVJ0
VTLVVLPLLLMASHN

SLC22A6

21

Q4U2R8
LSILGSTVMVIHAPQ

NIPAL1

176

Q6NVV3
PLVNLTDMLSVAVQH

FOCAD

1596

Q5VW36
EITSAAMVHSLPTAV

LARP1B

576

Q659C4
VMIFLIQVDSRLHTP

OR2T11

41

Q8NH01
NPSALHTLVEDILVM

EPHA6

936

Q9UF33
LSDMVSNIELPTRIH

MIA2

521

Q96PC5
TTVQLSHPAAMELVL

KIF13A

1256

Q9H1H9
THSLLANIVPIAMLV

MT-ND4L

51

P03901
LMTLSLQSVPLHHQV

FOXN4

351

Q96NZ1
VRVTVQLSHPADMQL

KIF13B

1251

Q9NQT8
VTVAQTTMEPHLLEA

QARS1

541

P47897
NLATPHRLAIETTMN

SZT2

1681

Q5T011
MPDPHITLTNVTSAV

USH2A

2761

O75445
ELAITTRPHQIIMPS

USP9X

1971

Q93008
NVPMTGSISHVLVQL

UTP25

561

Q68CQ4
TVDVSDMGPSHIINI

POLR3D

126

P05423
MVESLLSLANQPVIH

STN1

231

Q9H668
MLRSHQVSVTLDPDT

TRIM38

286

O00635
TVRAELMEQVPHIAL

PPP4R1

101

Q8TF05
VLLVDLTHEEMPQSI

MRPL4

216

Q9BYD3
HSILNAAIMISVIVV

PSEN1

131

P49768
LHPMLLSIIITVADN

TOGARAM2

841

Q6ZUX3
MQPLSSIHVRTETLA

RIF1

321

Q5UIP0
AAQVHVLMLTPEALV

RECQL4

571

O94761
STNLLHSAMIIDETP

TAF2

326

Q6P1X5
LIRSIPTMLSVHAEQ

MED24

221

O75448
QQHSSEVPMTLAELS

SLC39A4

211

Q6P5W5
VITQLTMPVSVTHAG

PKD1L3

231

Q7Z443
PISMATLENLLSHTI

PRAMEF25

391

A6NGN4
SHAASRPNIILVMAD

STS

21

P08842
HSMTAIRISPETLEQ

MYCBP2

431

O75592
MELLSTPHSIEINNI

PHYHIP

1

Q92561
PISMATLENLLSHTI

PRAMEF27

391

A3QJZ7
SMEGSIVHLPQIIAL

SPTLC3

311

Q9NUV7
DVQLHPEASCLIMTT

SKIV2L

386

Q15477
IEIMSSLNHPHIIAI

NUAK2

101

Q9H093
LLVNQHSMVSVSTPI

MAP1LC3A

81

Q9H492
DSEIITNMAHLGVPI

STXBP1

436

P61764
TNMAHLGVPIVTDST

STXBP1

441

P61764
TIDHFMCETSPILQI

OR6C6

171

A6NF89
HTLPAAQMVITDLSA

SLC22A18

131

Q96BI1
ASLVTQPADVIKTHM

SLC25A38

231

Q96DW6
SVPAELNMDHTVVLQ

SNF8

171

Q96H20
EESQAMQAHVSIILP

B3GNTL1

11

Q67FW5
SQPSSLAMLDLLHVA

ALK

1216

Q9UM73
SLLSPSVMRLVHTQE

ALKBH7

136

Q9BT30
SAEVHMSIPNVSLPL

CTSO

96

P43234
ITIANHEGTLEPSMI

CCNB1IP1

186

Q9NPC3
TTMDVAPVILAAHRN

TRPC1

156

P48995
QSSHLEIMCAPVRLI

UHRF1BP1L

196

A0JNW5
ARSHTAPVLALAMEQ

WDR90

696

Q96KV7
AIKANIVHLMLSSPE

CSE1L

91

P55060
VMSLLLETHKNDIPS

CSE1L

666

P55060
PSSELQVSLMHSARI

ZBTB12

66

Q9Y330
LLVNGHSMVSVSTPI

MAP1LC3B2

81

A6NCE7
LLASISNISPHLMIV

SPEN

3646

Q96T58
MQVVPVLVHLLSAIS

MTREX

726

P42285
HLLEMLIQLPANSVT

PIGT

426

Q969N2
TLHSEVLSPEMLQCT

REV3L

336

O60673
VHVMRTLASENIPSL

PPM1A

331

P35813
IMDTVFHDSSPTQIL

TASL

226

Q9HAI6
MDTTPLITEHVINTT

TMEM144

156

Q7Z5S9
QMLTAVQEISHLIEP

TLN1

1701

Q9Y490
MEPIHLSSAIAAKQI

STYXL2

51

Q5VZP5
RMLAQAVHSLSVIPD

TRAF6

271

Q9Y4K3
SALASVVQHLPLELM

USP35

231

Q9P2H5
LRPTMQTLICDVHSI

SUPT20H

166

Q8NEM7
CTLVHTAMDNPVDLI

TNR

946

Q92752
ALSVQMFTVPTLARH

UBR1

416

Q8IWV7
MFTVPTLARHLIEEQ

UBR1

421

Q8IWV7
MEVALQTEPHLLAGT

TENM4

1776

Q6N022
SSTAMIAILTHQFPE

ST7L

521

Q8TDW4
ISELTIARPHQIIMS

USP9Y

1971

O00507
LPNTVQHMLLSDALT

TCF20

466

Q9UGU0
ALASLVQHIPLQMIT

USP38

236

Q8NB14
THLMRVLVQTLCEPA

PRKDC

1366

P78527
PETMHLVSESSSQVL

TMEM109

71

Q9BVC6
HNTVSLMDHLLSVPE

TOPAZ1

386

Q8N9V7
HSVLLVASQPVEIMT

UEVLD

286

Q8IX04
ASSLPQLVEMIVDHQ

SLC4A4

176

Q9Y6R1
QTASDVPVLQVIMHS

PRSS50

176

Q9UI38
MQTTQVIEPHDISVA

VIRMA

1126

Q69YN4
HPTLLSSLEGIVDQM

TRRAP

3311

Q9Y4A5
MVTTAAIDIHQPNIS

TMEM266

351

Q2M3C6
SHPVQALMESFTVLS

TGFBR3

36

Q03167
VSISTSVILMQHLLP

TMEM39B

326

Q9GZU3
THISATASMAVPLLE

TSC2

831

P49815
LLVAMTEHNPTFTRL

ULK4

1011

Q96C45
TLSHDIHTPVNMQVL

ZC3HAV1L

126

Q96H79
TTMAEHFLTLLVVPA

TSPAN1

111

O60635
AELTSMELPVLLLHQ

PP2D1

216

A8MPX8
HDTALSIVDPVQIQM

VPS13D

2526

Q5THJ4
IQLLMALPTTICHAE

GEMIN4

126

P57678
LQSHMILGLVVTLSP

KEL

361

P23276
MDVDTLHTVALSHPL

KLHL32

236

Q96NJ5
TPGLTTVEIVTMSHQ

LDLR

756

P01130
MVEVSIVQLPHLSNS

LRFN2

371

Q9ULH4
ISIVMNSVEPSHKST

N4BP2L2

541

Q92802
HLSVVPRVELVAMNE

GRIN2B

61

Q13224