Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionextracellular matrix structural constituent

COL4A6 COL27A1 EMID1

4.20e-04188163GO:0005201
GeneOntologyMolecularFunctionextracellular matrix structural constituent conferring tensile strength

COL4A6 COL27A1

6.10e-0446162GO:0030020
GeneOntologyBiologicalProcessnotochord development

COL27A1 WNT11

1.35e-0424152GO:0030903
GeneOntologyBiologicalProcesscartilage development

PKDCC COL27A1 WNT11

6.62e-04243153GO:0051216
GeneOntologyCellularComponentcollagen trimer

COL4A6 COL27A1 EMID1

3.88e-0588163GO:0005581
GeneOntologyCellularComponentcomplex of collagen trimers

COL4A6 COL27A1

1.14e-0421162GO:0098644
GeneOntologyCellularComponentextracellular matrix

COL4A6 COL27A1 EMID1 WNT11

1.29e-03656164GO:0031012
GeneOntologyCellularComponentexternal encapsulating structure

COL4A6 COL27A1 EMID1 WNT11

1.31e-03658164GO:0030312
GeneOntologyCellularComponentcollagen-containing extracellular matrix

COL4A6 COL27A1 EMID1

7.10e-03530163GO:0062023
MousePhenoneonatal lethality, complete penetrance

PHOX2B PKDCC POU3F3 COL27A1 WNT11

1.74e-04534155MP:0011087
MousePhenodelayed kidney development

POU3F3 WNT11

2.23e-0421152MP:0000528
MousePhenoperinatal lethality, complete penetrance

PHOX2B PKDCC POU3F3 COL27A1 WNT11

6.62e-04712155MP:0011089
MousePhenorespiratory failure

PHOX2B PKDCC COL27A1

6.62e-04165153MP:0001953
MousePhenoabnormal kidney size

PKDCC TNS2 POU3F3 COL27A1 WNT11

6.70e-04714155MP:0002706
MousePhenodecreased respiration

PHOX2B PKDCC COL27A1

7.22e-04170153MP:0014274
MousePhenodecreased pulmonary ventilation

PHOX2B PKDCC

7.78e-0439152MP:0005576
MousePhenosmall kidney

PKDCC TNS2 POU3F3 WNT11

8.81e-04425154MP:0002989
MousePhenoabnormal xiphoid process morphology

PKDCC COL27A1

1.04e-0345152MP:0000159
MousePhenoneonatal lethality

PHOX2B PKDCC POU3F3 COL27A1 WNT11

1.12e-03799155MP:0002058
MousePhenoincreased stereotypic behavior

ARHGEF11 TAOK1

1.43e-0353152MP:0001409
MousePhenoabnormal pulmonary ventilation

PHOX2B PKDCC

1.49e-0354152MP:0002338
DomainCollagen

COL4A6 COL27A1 EMID1

4.88e-0585163PF01391
DomainCollagen

COL4A6 COL27A1 EMID1

4.88e-0585163IPR008160
DomainHomeobox_CS

PHOX2B POU3F3

1.08e-02186162IPR017970
DomainHomeobox

PHOX2B POU3F3

1.67e-02234162PF00046
DomainHOMEOBOX_1

PHOX2B POU3F3

1.70e-02236162PS00027
DomainHOX

PHOX2B POU3F3

1.71e-02237162SM00389
DomainHomeobox_dom

PHOX2B POU3F3

1.74e-02239162IPR001356
DomainHOMEOBOX_2

PHOX2B POU3F3

1.74e-02239162PS50071
Domain-

PHOX2B POU3F3

2.39e-022831621.10.10.60
Pubmed

Differential activities of the RET tyrosine kinase receptor isoforms during mammalian embryogenesis.

PHOX2B WNT11

8.91e-061016211562352
Pubmed

Distinct and sequential tissue-specific activities of the LIM-class homeobox gene Lim1 for tubular morphogenesis during kidney development.

POU3F3 WNT11

1.09e-051116215930111
Pubmed

Cessation of renal morphogenesis in mice.

POU3F3 WNT11

1.31e-051216217826763
Pubmed

Pax 2/8-regulated Gata 3 expression is necessary for morphogenesis and guidance of the nephric duct in the developing kidney.

POU3F3 WNT11

3.38e-051916216319112
Pubmed

T-Box transcription factor Tbx20 regulates a genetic program for cranial motor neuron cell body migration.

PHOX2B WNT11

4.15e-052116217119020
Pubmed

The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices.

COL4A6 COL27A1 EMID1

5.82e-0516716322159717
Pubmed

Dicer regulates the development of nephrogenic and ureteric compartments in the mammalian kidney.

POU3F3 WNT11

6.41e-052616220944551
Pubmed

Identification of molecular compartments and genetic circuitry in the developing mammalian kidney.

POU3F3 WNT11

1.53e-044016222510988
Pubmed

Proteomic characterization of human multiple myeloma bone marrow extracellular matrix.

COL4A6 COL27A1

3.69e-046216228344315
CytobandEnsembl 112 genes in cytogenetic band chr11q13

PCNX3 WNT11

1.07e-02454162chr11q13
GeneFamilyCollagens

COL4A6 COL27A1

4.85e-0446132490
CoexpressionBLANCO_MELO_INFLUENZA_A_INFECTION_A594_CELLS_DN

PKDCC ORAI2 COL27A1

4.77e-05118163M34005
CoexpressionGSE13485_DAY1_VS_DAY3_YF17D_VACCINE_PBMC_UP

PHOX2B EMID1 WNT11

1.84e-04186163M3291
CoexpressionGAO_LARGE_INTESTINE_ADULT_CJ_IMMUNE_CELLS

COL4A6 TNS2 COL27A1 EMID1

2.06e-04505164M39167
CoexpressionGSE24671_CTRL_VS_SENDAI_VIRUS_INFECTED_MOUSE_SPLENOCYTES_DN

PCNX3 ORAI2 TAOK1

2.24e-04199163M9443
CoexpressionGAUTAM_EYE_CHOROID_SCLERA_FIBROBLASTS

PNISR TNS2 COL27A1

2.24e-04199163M43608
CoexpressionGSE36078_WT_VS_IL1R_KO_LUNG_DC_AFTER_AD5_INF_UP

RBM47 TNS2 EMID1

2.28e-04200163M9286
CoexpressionGSE17721_POLYIC_VS_GARDIQUIMOD_4H_BMDC_UP

RBM47 EMID1 WNT11

2.28e-04200163M4021
CoexpressionGSE15733_BM_VS_SPLEEN_MEMORY_CD4_TCELL_UP

PHOX2B POU3F3 COL27A1

2.28e-04200163M3568
CoexpressionGSE21670_UNTREATED_VS_IL6_TREATED_CD4_TCELL_DN

ARHGEF11 PCNX3 TAOK1

2.28e-04200163M7441
CoexpressionNABA_COLLAGENS

COL4A6 COL27A1

3.11e-0443162MM17060
CoexpressionNABA_COLLAGENS

COL4A6 COL27A1

3.26e-0444162M3005
CoexpressionRICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP

PKDCC PNISR EMID1

3.98e-04242163M904
CoexpressionBENPORATH_PRC2_TARGETS

PHOX2B COL4A6 COL27A1 WNT11

5.38e-04650164M8448
CoexpressionNABA_CORE_MATRISOME

COL4A6 COL27A1 EMID1

5.48e-04270163MM17057
CoexpressionNABA_CORE_MATRISOME

COL4A6 COL27A1 EMID1

5.78e-04275163M5884
CoexpressionMIKKELSEN_NPC_LCP_WITH_H3K4ME3

ARHGEF11 TNS2

6.06e-0460162M2018
CoexpressionMIKKELSEN_NPC_LCP_WITH_H3K4ME3

ARHGEF11 TNS2

6.47e-0462162MM865
ToppCelldroplet-Pancreas-Endocrine-18m-Epithelial-nan|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PKDCC PNISR EMID1

2.67e-0516616366026988509e39e41274fa0de738383219e8ff30
ToppCellAdult-Mesenchymal-chondrocyte-D175|Adult / Lineage, Cell type, age group and donor

PKDCC COL27A1 EMID1

2.76e-0516816314071b961c9bdb54a8259b12a88237b802cbde36
ToppCell3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PKDCC TNS2 COL27A1

2.86e-05170163b5b47fe42617a4c2ebb49c8ed55db3926213a75a
ToppCellChildren_(3_yrs)-Mesenchymal-myofibroblast_cell-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL4A6 COL27A1 WNT11

3.02e-051731631f16d47f5548e257e4b17f8070c5619780a9c5fd
ToppCellkidney_cells-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_1|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

PNISR COL4A6 POU3F3

3.02e-051731630c74bdb40e635d906fd180412c23bf7fed61621e
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-neuron_precursor-Neuroblast|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B ORAI2 POU3F3

3.80e-05187163dfc2b95d70daf533bc0cc4ce78af9f65dd75a25b
ToppCell5'-Adult-LargeIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A6 COL27A1 EMID1

3.86e-05188163997dcfc4f08738ab398d8abc15e4fd2fc6619862
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-neuron_precursor|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B ORAI2 POU3F3

4.05e-05191163a53616c84178eb6c29b48662358765b082df3f97
ToppCellControl_saline-Epithelial_alveolar-AT_2-Differentiating_AT2|Control_saline / Treatment groups by lineage, cell group, cell type

PNISR RBM47 COL4A6

4.44e-0519716344a59dfb889577b3160a5b13ada1276771a00241
ToppCell3'-Pediatric_IBD-SmallIntestine-Mesenchymal-fibroblastic-Stromal_2_(NPY+)|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A6 COL27A1 EMID1

4.57e-05199163ec74ff85d6b61013b1f785b2fca343759feb7843
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW12-OPC_related-Oligodendrocyte/OPC|GW12 / Sample Type, Dataset, Time_group, and Cell type.

PITPNM3 PKDCC POU3F3

4.64e-052001634db894cfb80fd1f9e01133f345eefd78edd4bc43
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW12-OPC_related|GW12 / Sample Type, Dataset, Time_group, and Cell type.

PITPNM3 PKDCC POU3F3

4.64e-05200163d46a19274c2836ce7494790ce513764dedcadc79
ToppCellPND01-03-samps-Mesenchymal-Matrix_fibroblast-matrix_-_mature_3|PND01-03-samps / Age Group, Lineage, Cell class and subclass

RNF25 PCNX3

1.07e-031371629bfdbc102cdd861996b3c4eac35b606be8af97eb
ToppCellLPS-antiTNF-Hematopoietic_Meg-Ery-Mes-Epi-like-Erythroid|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PKDCC COL4A6

1.07e-031371628e2fa2ef8becace96a68bb85c002329110902fbb
ToppCell10x_3'_v3-lymph_node_(10x_3'_v3)-hematologic-hematopoietic_progenitor-hematopoietic_stem_cell|lymph_node_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

PKDCC EMID1

1.17e-0314316227e06327f96cb72bd111ea6ece6307e5ebb3a146
ToppCell10x_3'_v3-lymph_node_(10x_3'_v3)-hematologic-hematopoietic_progenitor|lymph_node_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

PKDCC EMID1

1.17e-031431624edef95ae2a1ef4fc4b0d4fadf75bfc54b583932
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c09-SLC4A10|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

TNS2 WNT11

1.23e-031471629566398275cad79223db90ffe640830acf2db864
ToppCellCOVID-19_Mild-PLT_3|World / Disease Group and Platelet Clusters

TNS2 EMID1

1.23e-031471629d3271aa735ddb6f32ab864d7afcfb0f8754383b
ToppCell3'_v3-bone_marrow-Lymphocytic_Invariant-Inducer-like-ILC3|bone_marrow / Manually curated celltypes from each tissue

PKDCC EMID1

1.27e-03149162d7f1069f70f3cad6d3700ee2041ed1d4cb7c49ab
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-high_Fibroblast-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

TNS2 EMID1

1.28e-031501621270f33f9d7e46e55adf1a96e8beee858b95589d
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-high_Fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

TNS2 EMID1

1.28e-03150162156118ce1d69522624196410cba18b8354cd0bb4
ToppCellP03-Epithelial-epithelial_progenitor_cell-epi_progenitor|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

PITPNM3 RBM47

1.30e-03151162fce04bce66411c21cd5d4d41375f26f1f50f3348
ToppCelldroplet-Liver-Hepatocytes-24m-Epithelial-nan|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PKDCC COL27A1

1.32e-03152162c21e2152b0130485659051d8fb7fb4589d1ec997
ToppCell367C-Myeloid-Macrophage-FABP4+_Macrophage_2|Macrophage / Donor, Lineage, Cell class and subclass (all cells)

PKDCC TAOK1

1.32e-031521627a1072315cce71eefe2d32149a107d5648999968
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

RBM47 WNT11

1.34e-03153162151c469b26f9adf04dd6f117f03bef760cc3d45d
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Medullary_Thick_Ascending_Limb_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

RBM47 POU3F3

1.34e-031531620307f10e772021ae68a42690634df458672a6df9
ToppCellE16.5-samps-Epithelial-Alveolar_epithelial_precursor-Noncycling_AT1_Precursor|E16.5-samps / Age Group, Lineage, Cell class and subclass

PITPNM3 RBM47

1.35e-031541628a643d91896af9b630a715fb284c1523d01ad1a3
ToppCellfacs-Heart-RV-24m-Myeloid-monocyte|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PKDCC RBM47

1.35e-0315416260e7c03d91ea87eb6226a744633cbe6efa9a9928
ToppCellfacs-Heart-RV-24m-Myeloid-monocyte|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PKDCC RBM47

1.35e-031541628c65d4ea787a75f20448b11beea571d7ec684721
ToppCellfacs-Heart-RV-24m-Myeloid|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PKDCC RBM47

1.35e-03154162709e7eedec11e675c6bbd55940f91dea5f715f4c
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4/8-lo-Trm_Tgd|lymph-node_spleen / Manually curated celltypes from each tissue

POU3F3 WNT11

1.35e-0315416251ffb3fa0250bd31be764ed048728aa064056e16
ToppCellcontrol-B_cell|control / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

PKDCC WNT11

1.41e-031571621269b55f2ef6a493f6116b131cc5cc7b8897d63e
ToppCellwk_15-18-Mesenchymal-Myofibro_&_SMC-Myofibro_2|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

COL27A1 WNT11

1.41e-03157162b9d04ee417c0d8ea0801d10f1c54e138587009fd
ToppCellControl-Epithelial_alveolar-AT_2-Differentiating_AT1|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PKDCC WNT11

1.41e-031571624766f7d545bf2d775390589460677519cb92f4d5
ToppCellfrontal_cortex-Non-neuronal-leptomeningeal_cell-VLMC-VLMC_Spp1_Col15a1|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

COL4A6 TNS2

1.44e-0315916234c90711c5857cf6ada7b3acff99f1d48c7caf29
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-high_Fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PKDCC EMID1

1.44e-031591622607b562903228274fbd96168ba826782fab0b53
ToppCellAdult-Mesenchymal-chondrocyte|Adult / Lineage, Cell type, age group and donor

TNS2 COL27A1

1.44e-031591623f7305ee76447064b5c846c4f576360a2f7e0b7c
ToppCellTCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma-Stomach_Adenocarcinoma_-_Tubular-6|TCGA-Stomach / Sample_Type by Project: Shred V9

PCNX3 RBM47

1.44e-03159162655c0749c238bd68cb797adb83e25a23b8a3cc9d
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-high_Fibroblast-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PKDCC EMID1

1.44e-03159162e812cbde59188924c6277c3feadf1a9592fa62a4
ToppCellnormal_Pleural_Fluid-B_lymphocytes-Undetermined|normal_Pleural_Fluid / Location, Cell class and cell subclass

PNISR ORAI2

1.46e-031601625744cd30709f38e84f7ec8893dc19d7a288b465a
ToppCellPND03-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway-SCMF-SCMF_prolif|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL27A1 WNT11

1.50e-031621623f264263878af630921911c2b344ac56eb1e7099
ToppCelldroplet-Limb_Muscle-nan-18m-Myeloid-chondrocyte-like|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RBM47 COL27A1

1.50e-0316216271d7849108a1b59beff40e46000172c45a2f5439
ToppCellTCGA-Stomach-Solid_Tissue_Normal-Stomach_normal_tissue-Stomach_normal_tissue-7|TCGA-Stomach / Sample_Type by Project: Shred V9

PHOX2B COL4A6

1.50e-03162162b115b5799137122bd60696f8ae2aebadad6cd044
ToppCell5'-GW_trimst-2-LargeIntestine-Epithelial-Tuft-related-Tuft|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PCNX3 COL27A1

1.50e-0316216280619a93c57fe16daf91dc571874ef9ac888953d
ToppCellwk_08-11-Mesenchymal-Myofibro_&_SMC-Late_airway_SMC|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

COL4A6 TNS2

1.51e-031631621e8730d75cccf7292010683ab4e81a69d8e3bfa9
ToppCellBAL-Severe-cDC_8|Severe / Compartment, Disease Groups and Clusters

ARHGEF11 TAOK1

1.53e-03164162e8cbe7e01eca32886eb44e02d5333056b6bebc50
ToppCell356C-Myeloid-Mast_cell-|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

PITPNM3 EMID1

1.53e-03164162f7288ec4daf494dae770ea6c58bead27660ccae1
ToppCell356C-Myeloid-Mast_cell|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

PITPNM3 EMID1

1.53e-03164162b3192c443f4848e6a8afdb89c155f9ec42a154b0
ToppCelldroplet-Bladder-BLADDER-1m-Epithelial-basal_bladder_epithelial_cell_(Krt5+)|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RBM47 EMID1

1.55e-03165162936581de8fcd097401707438b9bbe89dd4e3e247
ToppCellPND28-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte-Chondrocyte_mature|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

POU3F3 COL27A1

1.57e-0316616237794a84601a2a949d579663d4a4bb8bc8fb5923
ToppCellPND28-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

POU3F3 COL27A1

1.57e-0316616281c546c6d847e49e662b81e71992ca0f7a99e890
ToppCell356C-Myeloid-Macrophage-FABP4+_Macrophage|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

ARHGEF11 TNS2

1.57e-0316616289e2b8453180983533faccb4275867861876d7ee
ToppCell367C-Lymphocytic-NK_cells-NK_cell_E|NK_cells / Donor, Lineage, Cell class and subclass (all cells)

RBM47 EMID1

1.59e-03167162b5d15773be32cd277125fd3b4056a8fefaefa5ec
ToppCellnormal_Lymph_Node-Myeloid_cells-Pleural_Mac|Myeloid_cells / Location, Cell class and cell subclass

ARHGEF11 PCNX3

1.59e-03167162820472887f43b42ae7e44513ca3d5465fb4f71a7
ToppCellfacs-Trachea-nan-18m-Mesenchymal-chondrocyte|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

POU3F3 COL27A1

1.59e-031671627b1fd19946cee67dae68f0f0d98420abcd532482
ToppCellfacs-Trachea-18m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l34|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

POU3F3 COL27A1

1.59e-03167162102b3d160a44c8623fab1fd10e9054178c42a78b
ToppCell5'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature-ENCC/glia_Progenitor|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.61e-03168162948d9e9972bd2a4b503d55fa69b70dd568a35a67
ToppCellBasal_cells-IPF_03|World / lung cells shred on cell class, cell subclass, sample id

COL4A6 COL27A1

1.61e-0316816248089fa2d4a0f31a72405717119b767a92571f01
ToppCell10x5'-GI_small-bowel-Lymphocytic_Invariant-Inducer-like|GI_small-bowel / Manually curated celltypes from each tissue

PKDCC EMID1

1.61e-03168162d02eba7ece17edcdd47fd6b784c93910ce61090f
ToppCellE17.5-Mesenchymal-mesenchymal_fibroblast-tracheal_fibroblast|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

POU3F3 COL27A1

1.63e-0316916258e22f9119240664515fe91ca53812611a8f17d6
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-Degenerative_Fibroblast-Degenerative_Fibroblast_104|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TNS2 COL27A1

1.63e-031691626ff1172da690ca17f7108f1617b255b766971a57
ToppCellE16.5-samps-Epithelial-Alveolar_epithelial_precursor-Uncommitted_AE_cell|E16.5-samps / Age Group, Lineage, Cell class and subclass

RBM47 COL4A6

1.64e-031701625a64e05c263df915085988d881808221e2c0f2e2
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_1-Inh_L1-2_VIP_RPL41P3|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

PHOX2B EMID1

1.64e-0317016231e3f57673c99f4d8ef30faa9c40e5f7f5bf6460
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-hematologic-hematopoietic_progenitor-erythroid_progenitor_cell|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

COL4A6 POU3F3

1.64e-0317016274bb46826141bd1e80b4ce16e6bbfc770bd427d3
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-hematologic-hematopoietic_progenitor|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

COL4A6 POU3F3

1.64e-031701626592ebe204b43b81c6b6da99e05da72c0983b3fa
ToppCellprimary_visual_cortex-Neuronal-glutamatergic_neuron-L6_IT-L6_IT_VISp_Penk_Col27a1|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

ORAI2 COL27A1

1.66e-03171162d07e2c5f7d7f12c68860d4161d76372de174f1d8
ToppCell390C-Lymphocytic-ILC|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

TNS2 EMID1

1.66e-0317116270963f79711fe6088d6d01b29206b17ab89e5e73
ToppCell390C-Lymphocytic-ILC-ILC-2|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

TNS2 EMID1

1.68e-0317216284d16cd7f618c94888920680bdc9e7130d73fd75
ToppCellcontrol-Myeloid-Mast_cell|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

PKDCC EMID1

1.68e-03172162c1c99e6732234a6649a79610e99390db0c8f19b0
ToppCell3'-Broncho-tracheal-Mesenchymal-Fibroblastic-fibroblastic_type_1-Adventitial_fibroblasts-|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PKDCC WNT11

1.68e-03172162e37c0b5b547a7345179ab258dd2141fec7064c17
ToppCell3'-GW_trimst-1.5-LargeIntestine-Epithelial-epithelial_progenitor_cell-Distal_progenitor|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

ARHGEF11 RBM47

1.70e-0317316281c36b9fe02c59099f080b2db02f4eaf2783911f
ToppCell15-Trachea-Mesenchymal-Mesenchyme_RSPO2+|Trachea / Age, Tissue, Lineage and Cell class

COL4A6 COL27A1

1.72e-03174162fa0681e91724b9a51ee28b214ea5aa14e62ba1a3
ToppCellPCW_13-14-Neuronal-Neuronal_SCP-neuro_SCP_(0)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

PHOX2B POU3F3

1.72e-031741620d8e737860120dcd3a6b57992c612595904d585e
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-neurons_B-Branch_B1_(eMN)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.72e-03174162271c51d220842402975d97c86c9acfdbdf62a32c
ToppCellNS-control-d_0-4-Myeloid-Mast_cell|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

PKDCC EMID1

1.72e-031741622d1f5c17b1551f32f49618ec1bf68eafbfd02ace
ToppCelldroplet-Limb_Muscle-MUSCLE-1m-Endothelial-unknown|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PCNX3 EMID1

1.72e-03174162c58328c2f262506a4518f49f148e29874faf9171
ToppCell5'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature-Differentiating_glia|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.72e-03174162412ccc099028a372b9d953363984c2da54b2187f
ToppCellwk_15-18-Mesenchymal-Chondrocyte-intermediate_chondrocyte|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

POU3F3 COL27A1

1.74e-03175162a84965d28438a4228d841b357c2cd75cf4b59a63
ToppCellfacs-Trachea-24m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l34|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

POU3F3 COL27A1

1.76e-0317616277c3da2eaa072a6baefb5087fd07ec18c5e271cd
ToppCellThalamus-Neuronal-Excitatory|Thalamus / BrainAtlas - Mouse McCarroll V32

ORAI2 TAOK1

1.76e-03176162d2bbf13d21fb7582d7e5f90cd61a4ebe1cfccd66
ToppCell3'-GW_trimst-2-LargeIntestine-Neuronal-neurons_B-Branch_B1_(eMN)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.76e-03176162bfea433544c6d6b8ad55e50ca94c5574460c2e0b
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Macroglial-oligodendrocyte_precursor_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL27A1 EMID1

1.76e-03176162da0983929fa682a68e536c298a2d7add188b7563
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Macroglial-Oligodendrocyte_progenitor_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL27A1 EMID1

1.76e-03176162ef0ff02897104e938c8a632357d8f1a6f014e68a
ToppCell3'-GW_trimst-2-LargeIntestine-Neuronal-neurons_B|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.76e-031761623c78dee7e1111a579fde6d401b9ecb4d5b8e782f
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.78e-03177162d05497d2c80a66ec6a4e1733fea3a5534877a6a7
ToppCell3'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature-Differentiating_glia|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.78e-031771620417460bdb012bc43d7254377fa53d79cdab3f34
ToppCellControl-Epithelial_alveolar-AT_1-Differentiating_AT1|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PKDCC RBM47

1.78e-031771629af14a056eb6d88c6f11b09f6d4c0d3448d647d5
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neuron_precursor-Neuroblast|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.78e-031771626f3b254e56e722cc23495b49e99a4abce0243cb3
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m-Hematologic-hematopoietic_stem_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL27A1 EMID1

1.80e-03178162d9eba884e18a0c89bdc70c194bfe4d62cca164fa
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m-Hematologic-hematopoietic_stem_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL27A1 EMID1

1.80e-03178162b03aa1de9d20895ebad55f6fcd6fe7a49335db5a
ToppCellTCGA-Liver-Primary_Tumor-Hepatocellular_Carcinoma-Hepatocellular_Carcinoma-1|TCGA-Liver / Sample_Type by Project: Shred V9

PITPNM3 ORAI2

1.80e-0317816251c59dabf2d7aef1b1964f6f766d5ec07ef90f5a
ToppCelldroplet-Large_Intestine-COLON_PROXIMAL-30m-Hematologic|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL27A1 EMID1

1.80e-031781620f5cf34609df791c8baebfdc6590f6eb4dbe0509
ToppCellP03-Mesenchymal-mesenchymal_fibroblast-tracheal_fibroblast|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

POU3F3 COL27A1

1.80e-031781628591a40fced747ac16b3e8ebc7a22dfb3ad76da2
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-neurons_B|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.82e-03179162b8ca29aebd25ebac441bebd769bbf98c536d3166
ToppCell3'_v3-Lung-Lymphocytic_B|Lung / Manually curated celltypes from each tissue

PNISR ORAI2

1.84e-03180162237a2130a3f48595dad2417539c21e44585962b8
ToppCelldroplet-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l25|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

PKDCC WNT11

1.84e-03180162c4068fe47408cfd899131a85fa4b7e5908926f94
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-neurons_B-Branch_B2_(eMN)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PHOX2B POU3F3

1.84e-03180162368ff7fcfd21ad248f96a83a8b191040ba7d8670
ToppCellFetal_29-31_weeks-Mesenchymal-airway_smooth_muscle_cell-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL4A6 WNT11

1.86e-0318116225915e2500430a902db37d79a749ce2990b69810
ToppCellTCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Colon_Adenocarcinoma-5|TCGA-Colorectal / Sample_Type by Project: Shred V9

PITPNM3 RBM47

1.86e-031811628fcc9e77fee7c248df26b6c59b10e672242e2084
ToppCellwk_15-18-Mesenchymal-Chondrocyte|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

POU3F3 COL27A1

1.86e-031811628950844b3e65c7028d80da5787ae2ce509c3d52d
DrugLevocabastine hydrochloride [79547-78-7]; Down 200; 8.8uM; PC3; HT_HG-U133A

RNF25 PNISR ORAI2 TNS2

9.12e-061971647249_DN
DrugGK-101

COL4A6 COL27A1

2.88e-0436162CID000161853
DrugPimozide [2062-78-4]; Up 200; 8.6uM; HL60; HG-U133A

PHOX2B ORAI2 RBM47

3.05e-041921631562_UP
DrugHesperidin [520-26-3]; Down 200; 6.6uM; PC3; HT_HG-U133A

RNF25 PNISR ORAI2

3.05e-041921636714_DN
DrugPramoxine hydrochloride [637-58-1]; Down 200; 12.2uM; MCF7; HT_HG-U133A

PNISR ORAI2 TNS2

3.05e-041921636054_DN
Drugpararosaniline base; Down 200; 10uM; MCF7; HT_HG-U133A_EA

ARHGEF11 ORAI2 TNS2

3.10e-04193163893_DN
DrugTiabendazole [148-79-8]; Down 200; 19.8uM; MCF7; HT_HG-U133A

PNISR ORAI2 TNS2

3.14e-041941632840_DN
DrugCP-690334-01 [459212-38-5]; Down 200; 1uM; MCF7; HT_HG-U133A

ARHGEF11 ORAI2 TNS2

3.19e-041951633909_DN
DrugCarbimazole [22232-54-8]; Down 200; 21.4uM; MCF7; HT_HG-U133A

ARHGEF11 ORAI2 TNS2

3.19e-041951635399_DN
DrugSulfapyridine [144-83-2]; Up 200; 16uM; MCF7; HT_HG-U133A

COL4A6 TNS2 EMID1

3.24e-041961636101_UP
Drugradicicol; Down 200; 0.1uM; MCF7; HG-U133A

PNISR ORAI2 TNS2

3.24e-04196163325_DN
DrugGossypol [303-45-7]; Down 200; 7.8uM; PC3; HT_HG-U133A

ARHGEF11 COL4A6 TNS2

3.24e-041961634296_DN
DrugTremorine dihydrochloride [300-68-5]; Down 200; 15uM; MCF7; HT_HG-U133A

ARHGEF11 PNISR ORAI2

3.24e-041961636273_DN
DrugHexetidine [141-94-6]; Down 200; 11.8uM; HL60; HT_HG-U133A

RNF25 TNS2 EMID1

3.29e-041971632457_DN
DrugVigabatrin [60643-86-9]; Down 200; 31uM; MCF7; HT_HG-U133A

ARHGEF11 ORAI2 TNS2

3.29e-041971635415_DN
Drug3-Acetamidocoumarin [779-30-6]; Down 200; 19.6uM; MCF7; HT_HG-U133A

RNF25 TNS2 EMID1

3.29e-041971637361_DN
DrugCanrenoic acid potassium salt [2181-04-6]; Down 200; 10uM; MCF7; HT_HG-U133A

ORAI2 TNS2 EMID1

3.29e-041971632228_DN
DrugPNU-0251126 [267429-19-6]; Up 200; 1uM; PC3; HT_HG-U133A

PNISR ORAI2 COL4A6

3.34e-041981637390_UP
Drug5286656; Down 200; 50uM; MCF7; HT_HG-U133A_EA

ARHGEF11 PNISR ORAI2

3.34e-04198163889_DN
DrugOxytetracycline dihydrate [6153-64-6]; Down 200; 8uM; MCF7; HT_HG-U133A

ARHGEF11 TNS2 EMID1

3.34e-041981633170_DN
DrugHomosalate [118-56-9]; Up 200; 15.2uM; MCF7; HT_HG-U133A

ARHGEF11 COL4A6 EMID1

3.34e-041981633879_UP
DrugHydroflumethiazide [135-09-1]; Up 200; 12uM; MCF7; HT_HG-U133A

RNF25 ARHGEF11 EMID1

3.39e-041991637019_UP
DrugD-cycloserine [68-41-7]; Up 200; 39.2uM; PC3; HT_HG-U133A

ORAI2 COL4A6 EMID1

3.39e-041991637134_UP
DrugNeomycin sulfate [1405-10-3]; Down 200; 4.2uM; HL60; HG-U133A

ARHGEF11 ORAI2 RBM47

3.39e-041991631383_DN
DrugAtropine-N-oxide hydrochloride [4574-60-1]; Up 200; 11.8uM; PC3; HT_HG-U133A

ARHGEF11 PNISR TNS2

3.39e-041991632054_UP
DrugPentoxifylline [6493-05-6]; Up 200; 14.4uM; PC3; HT_HG-U133A

ARHGEF11 PNISR ORAI2

3.44e-042001632127_UP
DrugPseudopelletierine hydrochloride [6164-62-1]; Down 200; 21uM; PC3; HT_HG-U133A

ORAI2 COL4A6 TNS2

3.44e-042001635828_DN
DiseaseMENTAL RETARDATION, AUTOSOMAL DOMINANT 40

POU3F3 TAOK1

8.67e-069152C4225275
DiseaseGlobal developmental delay

POU3F3 TAOK1

2.04e-03133152C0557874
Diseasefemoral neck bone mineral density

PHOX2B PKDCC

4.35e-03196152EFO_0007785
Diseasemonocyte percentage of leukocytes

ARHGEF11 PKDCC RBM47

5.52e-03731153EFO_0007989
Diseaseplatelet crit

ARHGEF11 EMID1 WNT11

1.14e-02952153EFO_0007985
DiseaseIntellectual Disability

POU3F3 TAOK1

2.11e-02447152C3714756
Diseasetotal blood protein measurement

PKDCC RBM47

2.13e-02449152EFO_0004536

Protein segments in the cluster

PeptideGeneStartEntry
NGIPGHPGQPGPRGP

COL4A6

106

Q14031
HPWDPGSPGQAPPGG

ARHGEF11

1246

O15085
GGPPPGWEGPHPQRG

RBM47

56

A0AV96
QPGPPPGPGSHTGWQ

ORAI2

181

Q96SN7
NGDQPLPPGPGWGPR

PCNX3

1866

Q9H6A9
QGQPGHPGPRGWPGP

COL27A1

1381

Q8IZC6
DWGLQGPRGPPGPRG

COL27A1

1596

Q8IZC6
NHWPQGPTGPPGPPG

EMID1

286

Q96A84
PPPPHQGHPGGWGAA

POU3F3

176

P20264
GAPGWPPAPGPGSPG

PKDCC

111

Q504Y2
GGPGPHWGHPMGGPP

TAOK1

916

Q7L7X3
PMQGGPQPWGHPSGP

TAOK1

936

Q7L7X3
GPPQEKGPGSWQGPP

RNF25

396

Q96BH1
RAGGPPPGGGAPWHL

PITPNM3

6

Q9BZ71
LPVWPGGPGRPGPHA

nan

171

Q3C1V9
GPVPGEPPGPGNRWG

WNT11

141

O96014
QGGFHPPYWQPGPPG

PNISR

176

Q8TF01
AGGPGQGWAPGPGPI

PHOX2B

266

Q99453
KRHLPGPGQQPGPWG

TNS2

1076

Q63HR2