Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionstructural constituent of cytoskeleton

CYLC2 MYOM1 KRT19 ACTL7B SPTBN4 PLEC DMD AGRN

1.44e-051301688GO:0005200
GeneOntologyMolecularFunctiondystroglycan binding

PLEC DMD AGRN

1.22e-04121683GO:0002162
GeneOntologyCellularComponentcostamere

KRT19 CMYA5 PLEC DMD AHNAK2

7.67e-07221695GO:0043034
GeneOntologyCellularComponentcontractile muscle fiber

CALD1 MYOM1 IDO1 KRT19 CMYA5 PGM1 PLEC DMD ASB2 AHNAK2

1.30e-0429016910GO:0043292
GeneOntologyCellularComponentcontractile actin filament bundle

MYLK CALD1 SEPTIN9 MICALL2 ASB2 FSCN1

2.35e-041071696GO:0097517
GeneOntologyCellularComponentstress fiber

MYLK CALD1 SEPTIN9 MICALL2 ASB2 FSCN1

2.35e-041071696GO:0001725
GeneOntologyCellularComponentactin cytoskeleton

MYLK CALD1 KRT19 SEPTIN9 ANKRD26 SPECC1L ACTL7B SPTBN4 NPFFR2 MICALL2 MACF1 ASB2 FSCN1 HSPB7

2.54e-0457616914GO:0015629
GeneOntologyCellularComponentactomyosin

MYLK CALD1 SEPTIN9 MICALL2 ASB2 FSCN1

3.81e-041171696GO:0042641
GeneOntologyCellularComponentmyofibril

CALD1 MYOM1 KRT19 CMYA5 PGM1 PLEC DMD ASB2 AHNAK2

3.93e-042731699GO:0030016
GeneOntologyCellularComponentactin filament bundle

MYLK CALD1 SEPTIN9 MICALL2 ASB2 FSCN1

3.99e-041181696GO:0032432
GeneOntologyCellularComponentsupramolecular fiber

COL6A3 CALD1 MYOM1 IDO1 KRT19 SEPTIN9 NCKIPSD SPECC1L CMYA5 PGM1 FAM83H SPTBN4 TRIM55 MACF1 PLEC DMD ASB2 GOLGA8A AHNAK2 PCNT KIF1C

5.62e-04117916921GO:0099512
GeneOntologyCellularComponentsupramolecular polymer

COL6A3 CALD1 MYOM1 IDO1 KRT19 SEPTIN9 NCKIPSD SPECC1L CMYA5 PGM1 FAM83H SPTBN4 TRIM55 MACF1 PLEC DMD ASB2 GOLGA8A AHNAK2 PCNT KIF1C

6.13e-04118716921GO:0099081
GeneOntologyCellularComponentphagophore assembly site membrane

ATG2B ATG14 RB1CC1

7.14e-04221693GO:0034045
GeneOntologyCellularComponentsarcolemma

COL6A3 KRT19 PLEC DMD ATP1A3 AGRN AHNAK2

9.17e-041901697GO:0042383
GeneOntologyCellularComponentsarcomere

MYOM1 KRT19 CMYA5 PGM1 PLEC DMD ASB2 AHNAK2

9.75e-042491698GO:0030017
GeneOntologyCellularComponentintermediate filament cytoskeleton

KRT19 NCKIPSD FAM83H PJA2 MTRR MACF1 PLEC DMD

1.38e-032631698GO:0045111
GeneOntologyCellularComponentZ disc

KRT19 PGM1 PLEC DMD ASB2 AHNAK2

1.45e-031511696GO:0030018
DomainACTININ_2

SPTBN4 CLMN MACF1 PLEC DMD

1.54e-06231665PS00020
DomainACTININ_1

SPTBN4 CLMN MACF1 PLEC DMD

1.54e-06231665PS00019
DomainActinin_actin-bd_CS

SPTBN4 CLMN MACF1 PLEC DMD

1.54e-06231665IPR001589
DomainCH

SPECC1L SPTBN4 MICALL2 CLMN MACF1 PLEC DMD

1.74e-06651667SM00033
DomainCH

SPECC1L SPTBN4 MICALL2 CLMN MACF1 PLEC DMD

2.89e-06701667PF00307
Domain-

SPECC1L SPTBN4 MICALL2 CLMN MACF1 PLEC DMD

3.18e-067116671.10.418.10
DomainCH

SPECC1L SPTBN4 MICALL2 CLMN MACF1 PLEC DMD

3.84e-06731667PS50021
DomainCH-domain

SPECC1L SPTBN4 MICALL2 CLMN MACF1 PLEC DMD

4.61e-06751667IPR001715
DomainFN3

COL6A3 MYLK MYOM1 NRCAM TSPOAP1 CMYA5 DSCAML1 CNTN5 TNXB EPHA10

6.24e-0618516610SM00060
DomainFN3

COL6A3 MYLK MYOM1 NRCAM TSPOAP1 CMYA5 DSCAML1 CNTN5 TNXB EPHA10

1.18e-0519916610PS50853
Domainfn3

MYLK MYOM1 NRCAM TSPOAP1 CMYA5 DSCAML1 CNTN5 TNXB EPHA10

1.47e-051621669PF00041
DomainFN3_dom

COL6A3 MYLK MYOM1 NRCAM TSPOAP1 CMYA5 DSCAML1 CNTN5 TNXB EPHA10

1.81e-0520916610IPR003961
DomainSMARCC_C

SMARCC1 SMARCC2

7.85e-0521662IPR032451
DomainSMARCC_N

SMARCC1 SMARCC2

7.85e-0521662IPR032450
DomainSWIRM-assoc

SMARCC1 SMARCC2

7.85e-0521662IPR032448
DomainSWIRM-assoc_2

SMARCC1 SMARCC2

7.85e-0521662PF16496
DomainSWIRM-assoc_1

SMARCC1 SMARCC2

7.85e-0521662PF16495
DomainSWIRM-assoc_3

SMARCC1 SMARCC2

7.85e-0521662PF16498
DomainZnf_U1

RBM20 ZFHX4 SCAPER ZNF638

1.20e-04291664IPR003604
DomainZnF_U1

RBM20 ZFHX4 SCAPER ZNF638

1.20e-04291664SM00451
DomainSpectrin_repeat

SPTBN4 MACF1 PLEC DMD

1.20e-04291664IPR002017
DomainSPEC

SPTBN4 MACF1 PLEC DMD

1.78e-04321664SM00150
DomainSpectrin/alpha-actinin

SPTBN4 MACF1 PLEC DMD

1.78e-04321664IPR018159
DomainChromo/shadow_dom

ARID4B SMARCC1 SMARCC2 CDYL

2.01e-04331664IPR000953
DomainCHROMO

ARID4B SMARCC1 SMARCC2 CDYL

2.01e-04331664SM00298
DomainDUF3496

ANKRD26 CCDC144A

2.34e-0431662IPR021885
DomainDUF3496

ANKRD26 CCDC144A

2.34e-0431662PF12001
DomainLRRC37AB_C

LRRC37A3 LRRC37A2

4.66e-0441662IPR029423
DomainLRRC37AB_C

LRRC37A3 LRRC37A2

4.66e-0441662PF14914
DomainLRRC37_N

LRRC37A3 LRRC37A2

4.66e-0441662IPR032754
DomainLRRC37

LRRC37A3 LRRC37A2

4.66e-0441662PF15779
DomainLRRC37A/B-like

LRRC37A3 LRRC37A2

4.66e-0441662IPR015753
Domain-

CUX2 GON4L NKX1-2 LHX2 ZFHX4 HOXD11 SMARCC1 SMARCC2 PAX4

9.89e-0428316691.10.10.60
DomainSpectrin

SPTBN4 MACF1 DMD

1.07e-03231663PF00435
Domain-

MACF1 PLEC

1.15e-03616623.90.1290.10
DomainSWIRM

SMARCC1 SMARCC2

1.15e-0361662PS50934
DomainSWIRM

SMARCC1 SMARCC2

1.15e-0361662PF04433
DomainSWIRM

SMARCC1 SMARCC2

1.15e-0361662IPR007526
DomainP-type_ATPase_IIC

ATP1A3 ATP1A4

1.15e-0361662IPR005775
DomainPlectin

MACF1 PLEC

1.60e-0371662PF00681
DomainPlectin_repeat

MACF1 PLEC

1.60e-0371662IPR001101
DomainPLEC

MACF1 PLEC

1.60e-0371662SM00250
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

CYLC2 RPGRIP1 CUX2 PHACTR2 MYLK CALD1 ATRX KRT19 RSL1D1 ANKRD26 ANKRD30B TKTL1 RRBP1 RPS6KC1 SPTBN4 BPTF TRAP1 C2CD3 PHF20L1 FAM186A SCN9A XRN1 SAFB2 SMARCC1 PALM SMARCC2 MACF1 PLEC DMD ATP1A3 ATP1A4 ZNF292 PCNT

1.95e-1314421733335575683
Pubmed

N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.

CALD1 TCOF1 AIMP1 SEPTIN9 SRGAP2 RB1CC1 RRBP1 PGM1 BPTF USP5 ZNF638 MACF1 PLEC FSCN1 AHNAK2 PCNT

4.31e-113601731633111431
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

EXO5 ARID4B ATRX TCOF1 RSL1D1 SEPTIN9 RRBP1 GPRIN1 BPTF SCAF1 ZNF335 SAFB2 ZNF638 SMARCC1 SMARCC2 OXSR1 PLEC DNMBP MN1 SYMPK HDLBP

3.50e-107741732115302935
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

CALD1 RSL1D1 SEPTIN9 ANKRD26 SRGAP2 SPECC1L RRBP1 TRAP1 RBM19 XRN1 SMARCC1 MTRR MACF1 OXSR1 PLEC DNMBP GEN1 AHNAK2 ZNF292 HDLBP

6.96e-107241732036232890
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

PHACTR2 KRT19 MAP3K14 NCKIPSD USP43 ANKRD26 SRGAP2 DENND4C FAM83H LPIN3 PJA2 C2CD3 CLMN XRN1 ANKRD11 MACF1 PLEC DNMBP GEN1 AHNAK2 KIF1C

2.33e-098611732136931259
Pubmed

E-cadherin interactome complexity and robustness resolved by quantitative proteomics.

PHACTR2 CALD1 RSL1D1 SEPTIN9 USP43 SRGAP2 RB1CC1 GPRIN1 DENND4C FAM83H CLMN XRN1 MACF1 PLEC FSCN1 USP15 HDLBP

4.05e-095651731725468996
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

BCL9L SYN3 NRCAM AIMP1 TSPOAP1 SEPTIN9 ATG2B RTN3 RRBP1 GPRIN1 BIRC6 RPS6KC1 PJA2 TRAP1 AMER2 CELSR2 XRN1 PALM SMARCC2 MACF1 PLEC USP15 HDLBP

1.33e-0811391732336417873
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

FRAS1 SRGAP2 BIRC6 CDC14B FAM83H FANCA LPIN3 ZGPAT SCAF1 VAC14 C2CD3 CELSR2 RBM19 ZNF335 ANKRD11 PALM PLEC DNMBP AGRN AHNAK2 PCNT SYMPK

3.62e-0811051732235748872
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

CALD1 SYN3 NRCAM WDR7 KRT19 SEPTIN9 NCKIPSD RTN3 SRGAP2 SPECC1L RRBP1 PGM1 SPTBN4 USP5 CLMN SCAPER XRN1 PALM SMARCC2 MACF1 PLEC DMD ATP1A3 FSCN1 HDLBP

4.98e-0814311732537142655
Pubmed

Tagging genes with cassette-exchange sites.

WDR7 SEPTIN9 BIRC6 BPTF USP5 SAFB2 SMARCC1 MACF1 OXSR1 PLEC FSCN1 ZNF292

1.33e-073351731215741177
Pubmed

A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome.

COL6A3 MYOM1 RSL1D1 ANKRD26 GON4L BCL3 CMYA5 BIRC6 PGM1 AKTIP CLMN TRIM55 MACF1 PLEC

2.24e-074971731423414517
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

CALD1 ATRX TCOF1 RSL1D1 SEPTIN9 ATG2B ANKRD26 SRGAP2 RRBP1 GPRIN1 TRAP1 CLMN XRN1 SAFB2 ZNF638 MACF1 AHNAK2 PCNT HDLBP

2.39e-079341731933916271
Pubmed

USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.

RSL1D1 GON4L LPIN3 FAM186A ZNF335 SMARCC1 SMARCC2 MACF1 PLEC DMD

3.06e-072341731036243803
Pubmed

Transcriptome analysis of mouse stem cells and early embryos.

CDC14C COL6A3 FOXN2 SRGAP2 RB1CC1 BIRC6 CDC14B BPTF ZNF335 SAFB2 FGD1 PLEC

3.15e-073631731214691545
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

TCOF1 AIMP1 RSL1D1 SEPTIN9 TIMM23 SRGAP2 RRBP1 PPWD1 BIRC6 TOE1 ZGPAT USP5 RBM19 ZNF638 SMARCC1 SMARCC2 MACF1 PLEC FSCN1 ZNHIT2 AHNAK2 KIF1C HDLBP

6.33e-0714151732328515276
Pubmed

E3 ubiquitin ligase RNF123 targets lamin B1 and lamin-binding proteins.

KRT19 TOPAZ1 SEPTIN9 RNF213 BCL3 ZNF831 GPRIN1 FAM186B BIRC6 DSCAML1 PGM1 RPS6KC1 FANCA SCAF1 LONRF2 SYMPK

9.54e-077361731629676528
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

ATRX AIMP1 RNF213 BPTF USP5 SAFB2 ZNF638 PLEC AHNAK2 SYMPK HDLBP

9.69e-073321731132786267
Pubmed

Cullin 1 (CUL1) Promotes Primary Ciliogenesis through the Induction of Ubiquitin-Proteasome-Dependent Dvl2 Degradation.

BCL9L FRAS1 RTEL1 CDH23 ACTL7B MACF1 PLEC AGRN

1.02e-06152173834299191
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

FRAS1 NRCAM WDR7 TSPOAP1 SEPTIN9 GON4L SLC39A10 SPATA2 PJA2 MACF1 USP15 PCNT

1.05e-064071731212693553
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

TCOF1 RSL1D1 BIRC6 BPTF USP5 XRN1 ZNF638 SMARCC1 SMARCC2 MACF1 PLEC FSCN1 PCNT SYMPK HDLBP

1.08e-066531731522586326
Pubmed

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

TCOF1 SEPTIN9 RRBP1 BPTF ZNF638 SMARCC1 SMARCC2 PLEC ATP1A4 HDLBP

1.16e-062711731032433965
Pubmed

The human cytoplasmic dynein interactome reveals novel activators of motility.

CCHCR1 CALD1 KRT19 SEPTIN9 ANKRD26 SPATA2 FAM83H PJA2 AKTIP C2CD3 XRN1 PLEC DNMBP USP15 AGRN PCNT KIF1C

1.41e-068531731728718761
Pubmed

BioID Performed on Golgi Enriched Fractions Identify C10orf76 as a GBF1 Binding Protein Essential for Golgi Maintenance and Secretion.

CALD1 SEPTIN9 ATG2B DENND4C XRN1 DNMBP USP15 AHNAK2 HDLBP

1.49e-06216173931519766
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

CYP4V2 CALD1 ATRX RTEL1 AIMP1 SEPTIN9 SREBF2 RTN3 RNF213 SRGAP2 RRBP1 ZP3 CDC14B SPTBN4 BPTF CLMN ANKRD11 ZNF638 MACF1 OXSR1 GPT2 USP15 PCNT

1.50e-0614891732328611215
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

TCOF1 WDR7 KRT19 RSL1D1 ANKRD26 MUC16 RNF213 SPECC1L SLC39A10 SPATA2 GPRIN1 BIRC6 RBM19 XRN1 ZNF638 FAM135A

1.92e-067771731635844135
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

ZNF787 TCOF1 WDR7 NOL12 TOE1 BPTF LHX2 SAFB2 ZNF638 SMARCC1 SMARCC2 MACF1 MPND PLEC AGRN TNXB PIK3R5 ZNF292 SYMPK

2.13e-0610821731938697112
Pubmed

SR protein kinases promote splicing of nonconsensus introns.

BCL9L MYOM1 RSL1D1 CDH23 GRM6 SPTBN4 SCAF1 VAC14 ZFHX4 RBM19 MACF1

2.18e-063611731126167880
Pubmed

Comprehensive identification of phosphorylation sites in postsynaptic density preparations.

SYN3 ATRX RTN3 GPRIN1 AMER2 CLMN SAFB2 SMARCC2 MACF1

2.59e-06231173916452087
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

CALD1 TCOF1 RSL1D1 SEPTIN9 SPECC1L RB1CC1 RRBP1 FAM83H BPTF SCAF1 TRAP1 SAFB2 ZNF638 SMARCC2 MACF1 PLEC PCNT HDLBP

3.95e-0610241731824711643
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

RSL1D1 SEPTIN9 RRBP1 BIRC6 TOE1 FAM83H ZGPAT ALKBH1 USP5 RBM19 XRN1 SAFB2 ZNF638 SMARCC1 SMARCC2 MACF1 PLEC FSCN1 AGRN AHNAK2 HDLBP

4.15e-0613531732129467282
Pubmed

Intrinsically Disordered Protein TEX264 Mediates ER-phagy.

TCOF1 RTN3 RB1CC1 SAFB2 ZNF638 SMARCC1 SMARCC2

4.43e-06131173731006538
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

BCL9L ATRX RB1CC1 ZNF831 BIRC6 TOE1 ZGPAT BPTF ZNF638 SMARCC1 SMARCC2 FSCN1

4.51e-064691731227634302
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

NUDT19 FRAS1 ATRX TCOF1 RSL1D1 ANKRD26 RTN3 VARS2 SLC39A10 RB1CC1 RRBP1 GPRIN1 PJA2 CLMN ANKRD11 PALM MACF1 FSCN1 ZNHIT2 FAM135A PCNT HDLBP

5.16e-0614871732233957083
Pubmed

The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.

TCOF1 ATG2B RRBP1 DENND4C XRN1 PLEC USP15 AHNAK2 HDLBP

5.98e-06256173933397691
Pubmed

Fras1 deficiency results in cryptophthalmos, renal agenesis and blebbed phenotype in mice.

COL6A3 FRAS1 AGRN

6.65e-068173312766770
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

CCHCR1 ATRX RSL1D1 SREBF2 SRGAP2 SLC39A10 PGM1 RPS6KC1 CLMN SAFB2 ZNF638 SMARCC1 MACF1 PLEC GEN1 AGRN FAM135A PCNT

8.59e-0610841731811544199
Pubmed

C5orf51 is a component of the MON1-CCZ1 complex and controls RAB7A localization and stability during mitophagy.

WDR7 ATG2B SREBF2 RTN3 SLC39A10 RRBP1 GPRIN1 TMEM38B DENND4C RPS6KC1 VAC14 FAM135A

9.30e-065041731234432599
Pubmed

ZMYM3 regulates BRCA1 localization at damaged chromatin to promote DNA repair.

ARID4B GON4L BPTF PHF20L1 SMARCC1 SMARCC2 CDYL

1.08e-05150173728242625
Pubmed

Proximity interactions among centrosome components identify regulators of centriole duplication.

CCHCR1 SPATA2 FAM83H PJA2 C2CD3 PCNT

1.19e-05101173624613305
Pubmed

ATG5 is required for B cell polarization and presentation of particulate antigens.

SPECC1L TOE1 ZGPAT USP5 TRAP1 SAFB2 ZNF638 SMARCC1 SMARCC2 OXSR1 PLEC GOLGA8A HDLBP PSD4

1.22e-057011731430196744
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

CUX2 RTEL1 RRBP1 BIRC6 DSCAML1 MACF1 USP15 PCNT

1.83e-05225173812168954
Pubmed

LncRNAs-directed PTEN enzymatic switch governs epithelial-mesenchymal transition.

NRCAM ATRX TOPAZ1 SEPTIN9 SREBF2 BIRC6 ANKRD11

2.25e-05168173730631154
Pubmed

Sensory Experience Modulates Atrx-mediated Neuronal Integrity in the Mouse Retina.

ATRX GRM6

2.46e-052173233197500
Pubmed

Agrin-signaling is necessary for the integration of newly generated neurons in the adult olfactory bulb.

ATP1A3 AGRN

2.46e-052173222423096
Pubmed

Overexpression of CDC14B causes mitotic arrest and inhibits zygotic genome activation in mouse preimplantation embryos.

CDC14C CDC14B

2.46e-052173219923902
Pubmed

The Cdc14B phosphatase displays oncogenic activity mediated by the Ras-Mek signaling pathway.

CDC14C CDC14B

2.46e-052173221502810
Pubmed

The Swi3 protein plays a unique role in regulating respiration in eukaryotes.

SMARCC1 SMARCC2

2.46e-052173227190130
Pubmed

Birth and rapid subcellular adaptation of a hominoid-specific CDC14 protein.

CDC14C CDC14B

2.46e-052173218547142
Pubmed

Genetic suppression of agrin reduces mania-like behavior in Na+ , K+ -ATPase α3 mutant mice.

ATP1A3 AGRN

2.46e-052173222520507
Pubmed

ATG14 and RB1CC1 play essential roles in maintaining muscle homeostasis.

ATG14 RB1CC1

2.46e-052173233794726
Pubmed

Whole exome sequencing identifies PLEC, EXO5 and DNAH7 as novel susceptibility genes in testicular cancer.

EXO5 PLEC

2.46e-052173229761480
Pubmed

Alpha3Na+/K+-ATPase is a neuronal receptor for agrin.

ATP1A3 AGRN

2.46e-052173216630822
Pubmed

Cux2 expression regulated by Lhx2 in the upper layer neurons of the developing cortex.

CUX2 LHX2

2.46e-052173231708105
Pubmed

Diagnostic utility of LDH, CA125 and CYFRA21-1 in tuberculosis pleural effusion.

KRT19 MUC16

2.46e-052173233495032
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

MEAF6 ARID4B CALD1 ATRX RSL1D1 SEPTIN9 RRBP1 BPTF RBM19 ANKRD11 SAFB2 ZNF638 SMARCC1 SMARCC2 SYMPK HDLBP

2.47e-059541731636373674
Pubmed

Multifaceted Regulation of Akt by Diverse C-Terminal Post-translational Modifications.

NCKIPSD PPP1R11 SMARCC1 OXSR1 GPT2

2.50e-0569173534941261
Pubmed

Protein interactome reveals converging molecular pathways among autism disorders.

ATRX NCKIPSD RTN3 SPTBN4 TRAP1 SAFB2 SMARCC2 CDYL MPND FSCN1 AGRN KIF1C

2.63e-055601731221653829
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

NRCAM TCOF1 WDR7 SRGAP2 SPECC1L ARMCX4 SPTBN4 CELSR2 SAFB2 SMARCC1 SMARCC2 MACF1 FSCN1 GOLGA8A AGRN PCNT

2.76e-059631731628671696
Pubmed

Fanconi anemia protein, FANCA, associates with BRG1, a component of the human SWI/SNF complex.

FANCA SMARCC1 SMARCC2

3.33e-0513173311726552
Pubmed

Sex-specific effect of insulin-dependent diabetes 4 on regulation of diabetes pathogenesis in the nonobese diabetic mouse.

COL6A3 KIF1C HDLBP

3.33e-0513173315905556
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

RTEL1 ANKRD26 RNF213 ATG14 VARS2 BIRC6 SCAPER SAFB2 MACF1 FAM135A KIF1C

3.99e-054931731115368895
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

TOE1 BPTF SCAF1 SAFB2 ZNF638 SMARCC1 PCNT SYMPK

3.99e-05251173831076518
Pubmed

Kelch Domain of Gigaxonin Interacts with Intermediate Filament Proteins Affected in Giant Axonal Neuropathy.

COL6A3 RNF213 TRAP1 PLEC DMD ZNHIT2 PCNT

4.46e-05187173726460568
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

MEAF6 ARID4B TCOF1 NOL12 TIMM23 RNF213 FAM83H BPTF SCAF1 PJA2 ZFHX4 SCAPER XRN1 SMARCC1 SMARCC2 MACF1 CDH16

4.56e-0511161731731753913
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

AIMP1 ATG2B RB1CC1 BIRC6 RBM20 DENND4C ZFHX4 XRN1 PLEC PCNT

5.05e-054181731034709266
Pubmed

A Multipronged Unbiased Strategy Guides the Development of an Anti-EGFR/EPHA2-Bispecific Antibody for Combination Cancer Therapy.

PHACTR2 ANKRD26 SRGAP2 SLC39A10 GPRIN1 CELSR2 PALM MACF1 DMD FAM135A

5.35e-054211731036976175
Pubmed

RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy.

SEPTIN9 ANKRD26 XRN1 ZNF638 MACF1 DNMBP FAM135A AHNAK2

5.55e-05263173834702444
Pubmed

ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation.

MEAF6 ARID4B SMARCC1 SMARCC2

5.71e-0542173416387653
Pubmed

The protein network surrounding the human telomere repeat binding factors TRF1, TRF2, and POT1.

CYLC2 CALD1 TCOF1 ZGPAT MACF1 DMD USP15

6.20e-05197173720811636
Pubmed

ISG15 Connects Autophagy and IFN-γ-Dependent Control of Toxoplasma gondii Infection in Human Cells.

AIMP1 KRT19 RSL1D1 ATG2B RNF213 SPECC1L PLEC AHNAK2

6.33e-05268173833024031
Pubmed

Efficient transposition of the piggyBac (PB) transposon in mammalian cells and mice.

WDR7 ZFHX4 GEN1

6.46e-0516173316096065
Pubmed

Qualitative and quantitative analyses of protein phosphorylation in naive and stimulated mouse synaptosomal preparations.

SYN3 NRCAM WDR7 RTN3 GPRIN1 AMER2 PALM MACF1 PLEC

6.53e-05347173917114649
Pubmed

A BioID-Derived Proximity Interactome for SARS-CoV-2 Proteins.

WDR7 BIRC6 TMEM38B DENND4C FAM83H FANCA ALKBH1 USP5 FGD1 PALM MACF1 AGRN FAM135A

6.92e-057191731335337019
Pubmed

Early-onset aging and defective DNA damage response in Cdc14b-deficient mice.

CDC14C CDC14B

7.36e-053173221262768
Pubmed

Identification of a VxP Targeting Signal in the Flagellar Na+ /K+ -ATPase.

ATP1A3 ATP1A4

7.36e-053173226373354
Pubmed

Cdc14b regulates mammalian RNA polymerase II and represses cell cycle transcription.

CDC14C CDC14B

7.36e-053173222355704
Pubmed

BAF chromatin remodeling complex: cortical size regulation and beyond.

SMARCC1 SMARCC2

7.36e-053173223974113
Pubmed

Up-Regulation of Intestinal Phosphate Transporter NaPi-IIb (SLC34A2) by the Kinases SPAK and OSR1.

SLC34A2 OXSR1

7.36e-053173226506223
Pubmed

Structural and functional evaluation of branched myofibers lacking intermediate filaments.

KRT19 DMD

7.36e-053173222592402
Pubmed

Specific interaction of the actin-binding domain of dystrophin with intermediate filaments containing keratin 19.

KRT19 DMD

7.36e-053173216000376
Pubmed

Clinical Evaluation of Tumor Markers for Diagnosis in Patients with Non-small Cell Lung Cancer in China.

KRT19 MUC16

7.36e-053173226163610
Pubmed

Biliary NIK promotes ductular reaction and liver injury and fibrosis in mice.

KRT19 MAP3K14

7.36e-053173236042192
Pubmed

Different cytokeratin and neuronal cell adhesion molecule staining patterns in focal nodular hyperplasia and hepatic adenoma and their significance.

NRCAM KRT19

7.36e-053173218602664
Pubmed

The extracellular matrix protein agrin promotes heart regeneration in mice.

DMD AGRN

7.36e-053173228581497
Pubmed

CDC14B acts through FZR1 (CDH1) to prevent meiotic maturation of mouse oocytes.

CDC14C CDC14B

7.36e-053173219129509
Pubmed

Cdc14A and Cdc14B Redundantly Regulate DNA Double-Strand Break Repair.

CDC14C CDC14B

7.36e-053173226283732
Pubmed

Mass Spectrometric Analysis Identifies AIMP1 and LTA4H as FSCN1-Binding Proteins in Laryngeal Squamous Cell Carcinoma.

AIMP1 FSCN1

7.36e-053173231287215
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

RNF213 PPP1R11 SLC39A10 RB1CC1 PPEF2 GPRIN1 BIRC6 CDC14B RBM20 C2CD3 ZNF638 PALM DMD PCNT SYMPK HDLBP

7.59e-0510491731627880917
Pubmed

POH1 contributes to hyperactivation of TGF-β signaling and facilitates hepatocellular carcinoma metastasis through deubiquitinating TGF-β receptors and caveolin-1.

ARID4B MAP3K14 CMYA5 ALKBH1 MICALL2 SAFB2 PLEC PCNT

7.96e-05277173830745168
Pubmed

MKRN2 Physically Interacts with GLE1 to Regulate mRNA Export and Zebrafish Retinal Development.

NRCAM ATRX TCOF1 AIMP1 RB1CC1 DSCAML1 SCAF1 CELSR2 MACF1

8.28e-05358173932460013
Pubmed

Genome-wide CRISPR screens using isogenic cells reveal vulnerabilities conferred by loss of tumor suppressors.

WDR7 RB1CC1 BIRC6 FANCA BPTF ZNF638 PALM CCDC144A HSPB7

8.45e-05359173935559673
Pubmed

Architectural niche organization by LHX2 is linked to hair follicle stem cell function.

LHX2 MACF1 PCNT

9.34e-0518173324012369
Pubmed

Generalist genes analysis of DNA markers associated with mathematical ability and disability reveals shared influence across ages and abilities.

FRAS1 NRCAM SRGAP2

9.34e-0518173320602751
Pubmed

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.

ARID4B RSL1D1 ATG2B ANKRD26 GON4L DENND4C C2CD3 XRN1 ZNF638 CDYL USP15 PCNT

1.01e-046451731225281560
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

CALD1 TCOF1 ATG2B SPECC1L GPRIN1 BPTF XRN1 SMARCC1 USP15 SYMPK HDLBP

1.04e-045491731138280479
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

FRAS1 ATRX SREBF2 GON4L RRBP1 RBM20 FANCA LPIN3 XRN1 ZNF638 SMARCC1 AGRN

1.09e-046501731238777146
Pubmed

Quantitative Proteomics Links the LRRC59 Interactome to mRNA Translation on the ER Membrane.

FRAS1 CALD1 RSL1D1 RTN3 RRBP1 GPRIN1 TMEM38B CLMN HDLBP

1.18e-04375173932788342
Pubmed

In vivo CRISPR screens reveal SCAF1 and USP15 as drivers of pancreatic cancer.

SCAF1 USP15

1.47e-044173238902237
Pubmed

Preactivation of AMPK by metformin may ameliorate the epithelial cell damage caused by renal ischemia.

ATP1A3 ATP1A4

1.47e-044173221849490
Pubmed

Exome sequencing in seven families and gene-based association studies indicate genetic heterogeneity and suggest possible candidates for fibromuscular dysplasia.

MYLK RNF213

1.47e-044173226147384
InteractionKRT19 interactions

NUDT19 CCHCR1 KRT19 ANKRD26 RB1CC1 BIRC6 FAM83H ZNF638 PLEC DMD DNMBP AGRN PCNT KIF1C

1.47e-0728217214int:KRT19
InteractionGOLGA1 interactions

ATG2B ANKRD26 BIRC6 DENND4C CLMN MACF1 DNMBP SYCE1 AHNAK2 PCNT

4.01e-0618317210int:GOLGA1
InteractionMBD3 interactions

CCHCR1 ARID4B ATRX USP43 BIRC6 BPTF PHF20L1 SMARCC1 SMARCC2 SYCE1 PCNT SYMPK

9.12e-0629517212int:MBD3
InteractionPPP1R12A interactions

MYLK CALD1 SEPTIN9 SPECC1L RB1CC1 RRBP1 CDC14B BPTF SMARCC1 SMARCC2 MACF1 USP15

2.18e-0532217212int:PPP1R12A
InteractionYWHAH interactions

PHACTR2 KRT19 NCKIPSD USP43 ANKRD26 SRGAP2 SPECC1L RB1CC1 DENND4C FAM83H LPIN3 PJA2 C2CD3 CLMN XRN1 ANKRD11 ZNF638 MACF1 PLEC DNMBP GEN1 AHNAK2 PCNT KIF1C

2.27e-05110217224int:YWHAH
InteractionHDAC1 interactions

ARID4B ATRX ATG2B USP43 GON4L BCL3 RB1CC1 BIRC6 RBM20 DENND4C ZGPAT BPTF ZFHX4 PHF20L1 XRN1 ZNF638 SMARCC1 SMARCC2 CDYL PLEC FSCN1 USP15 PCNT SYMPK

2.48e-05110817224int:HDAC1
InteractionSNRNP40 interactions

BCL9L TCOF1 RSL1D1 GON4L PPWD1 RBM20 TOE1 ZGPAT SCAF1 PHF20L1 SMARCC1 SMARCC2 CDYL FSCN1 ZNHIT2 USP15 HDLBP

3.37e-0563717217int:SNRNP40
InteractionCIT interactions

TCOF1 RSL1D1 SEPTIN9 NCKIPSD RNF213 SPECC1L CMYA5 PPWD1 BIRC6 TOE1 SPTBN4 BPTF SCAF1 TRAP1 CELSR2 RBM19 SAFB2 ZNF638 SMARCC1 SMARCC2 MACF1 CDYL OXSR1 PLEC FSCN1 AHNAK2 SYMPK HDLBP

3.93e-05145017228int:CIT
InteractionTOP3B interactions

NUDT19 FRAS1 RTEL1 AIMP1 SRGAP2 BIRC6 CDC14B FAM83H FANCA LPIN3 ZGPAT SCAF1 VAC14 C2CD3 CELSR2 RBM19 ZNF335 XRN1 ANKRD11 SAFB2 PALM PLEC DNMBP AGRN AHNAK2 PCNT SYMPK HDLBP

5.00e-05147017228int:TOP3B
InteractionPPP1CB interactions

MYLK CALD1 SEPTIN9 RNF213 PPP1R11 SPECC1L RB1CC1 RRBP1 USP5 MICALL2 SAFB2 ZNF638 PLEC HDLBP

5.23e-0546917214int:PPP1CB
InteractionYWHAG interactions

BNIP5 PHACTR2 KRT19 NCKIPSD USP43 ANKRD26 RTN3 SRGAP2 SPECC1L RB1CC1 PPEF2 DENND4C FAM83H LPIN3 PJA2 C2CD3 CLMN ANKRD11 ZNF638 MACF1 DNMBP GEN1 AHNAK2 KIF1C PSD4

5.98e-05124817225int:YWHAG
InteractionADARB1 interactions

TCOF1 RSL1D1 SEPTIN9 NOL12 RRBP1 BPTF SCAF1 RBM19 ZNF638 SMARCC1 SMARCC2 PLEC ATP1A4 HDLBP

8.17e-0548917214int:ADARB1
GeneFamilyFibronectin type III domain containing

MYLK MYOM1 NRCAM TSPOAP1 CMYA5 DSCAML1 CNTN5 TNXB EPHA10

9.03e-071601169555
GeneFamilyATPase Na+/K+ transporting subunits

ATP1A3 ATP1A4

8.39e-04711621208
GeneFamilyEF-hand domain containing|Plakins

MACF1 PLEC

1.11e-0381162939
GeneFamilyAutophagy related

ATG2B ATG14 RB1CC1

1.22e-033311631022
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

ATRX WDR7 SEPTIN9 MAP3K14 SRGAP2 SPECC1L RB1CC1 BPTF PJA2 C2CD3 ZNF638 MACF1 CDYL OXSR1 DMD DNMBP USP15 MN1 ZNF292 PCNT

1.05e-0685617320M4500
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN

ATRX WDR7 SEPTIN9 SRGAP2 SPECC1L BPTF PJA2 C2CD3 ZNF638 CDYL OXSR1 DNMBP ZNF292

1.43e-0546617313M13522
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000

CUX2 ARID4B SYN3 NRCAM ATRX TCOF1 RSL1D1 ANKRD26 RTN3 NR6A1 LHX2 VAC14 CELSR2 PLCH2 DMD ATP1A3 LONRF2 ZNHIT2 USP15 GEN1 ZNF292 PCNT

1.17e-0598916822Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000

NUDT19 ARID4B ATRX TCOF1 TSPOAP1 RSL1D1 RNF213 BCL3 CDC14B TOE1 FANCA SPTBN4 LHX2 SSC5D ZFHX4 PLCH2 SMARCC2 MACF1 CDYL ATP1A3 FAM135A ZNF292

1.17e-0598916822Facebase_RNAseq_e10.5_Maxillary Arch_1000
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

ARID4B ATRX RNF213 BIRC6 BPTF XRN1 ANKRD11 MACF1 USP15 GOLGA8A ZNF292

4.08e-102001731112f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell(02)_MMP9/10+-(2)_GFP_FOXI1|(02)_MMP9/10+ / shred by cell type by condition

MYLK CALD1 ATRX RTN3 RB1CC1 BPTF PJA2 ANKRD11 AHNAK2

8.96e-08199173918a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCellControl_saline-Mesenchymal_myocytic-Myofibroblastic|Control_saline / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 ATP1A4 LONRF2 TNXB

9.35e-0820017399d5b3c2dcfa55d50acc2ce2c319d51aa525d4cd1
ToppCellLPS_IL1RA_TNF-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 CMYA5 SSC5D ZFHX4 DMD ATP1A4 TNXB

9.35e-08200173909537dc25f8b8b4654a7c183827ee1522a41a4e0
ToppCellLPS_IL1RA_TNF-Mesenchymal_myocytic-Myofibroblastic|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D ZFHX4 DMD ASB2 ATP1A4 TNXB

9.35e-08200173908bf8c00eee6468215edb3611296bfc8784c4d56
ToppCell3'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 MYLK CALD1 NRCAM SSC5D MACF1 DMD TNXB

4.37e-0717517381799a7be623dc3bf53ba580a7c47d2619969d708
ToppCelldroplet-Heart-nan-3m|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATRX CMYA5 RBM20 XRN1 ZNF638 MACF1 DMD HDLBP

4.56e-071761738749b47eac5436fa34e0d243ffbc6f1897f4e431e
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FRAS1 NRCAM DSCAML1 ZFHX4 SCN9A DMD ATP1A4 EPHA10

6.39e-0718417382cbed6462fea2622871bb7e49b0df3d984239281
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ATRX RRBP1 BIRC6 XRN1 ANKRD11 ZNF638 SMARCC1 MACF1

6.39e-0718417381154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FRAS1 NRCAM DSCAML1 ZFHX4 SCN9A DMD ATP1A4 EPHA10

6.39e-071841738ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

FRAS1 NRCAM DSCAML1 ZFHX4 SCN9A DMD ATP1A4 EPHA10

6.39e-0718417382b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellPND10|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL6A3 MYLK CALD1 ATRX RRBP1 BPTF ANKRD11 MACF1

8.13e-071901738d67e2814047c8df2ae4b7bc8be9539f5df6ecef2
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-Activated_MatrixFB|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK NRCAM RRBP1 LHX2 MICALL2 MACF1 TNXB

1.07e-061971738fdb92985f7df0c280b87d3e43c2394e70786a2c7
ToppCellsevere-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

FRAS1 ARID4B RNF213 XRN1 ANKRD11 MACF1 GOLGA8A ZNF292

1.07e-06197173857ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

ATRX ANKRD26 RRBP1 SCAPER SAFB2 ZNF638 GOLGA8A ZNF292

1.07e-0619717380fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

PHACTR2 ATRX IDO1 ANKRD26 RB1CC1 BPTF ANKRD11 HDLBP

1.11e-06198173876d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

ATRX RNF213 BPTF ANKRD11 MACF1 USP15 GOLGA8A ZNF292

1.15e-061991738f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellLPS_anti-TNF-Mesenchymal_myocytic-Myofibroblastic|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 ATP1A4 TNXB

1.15e-061991738e9820d5fb4e8b46973c4c50ac5db8fb4a1bf603b
ToppCell(04)_Interm._basal>secr.-(2)_GFP_FOXI1|(04)_Interm._basal>secr. / shred by cell type by condition

PHACTR2 ARID4B ATRX IDO1 RB1CC1 BPTF ANKRD11 ZNF292

1.15e-06199173853ca3861f9e00dab3f3fbefb0837857ee39ab084
ToppCellLPS_anti-TNF-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 CMYA5 SSC5D ZFHX4 DMD TNXB

1.15e-06199173838cfd367ee8c074c11ba54edeb7a001e375e2687
ToppCellParenchymal-NucSeq-Stromal-Myofibroblastic-Muscle_smooth_pulmonary|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MYLK CALD1 MYOM1 RBM20 CLMN DMD ASB2 HSPB7

1.15e-061991738b1753474152b82a0b811b9878c890a359e14919a
ToppCellLPS_IL1RA-Endothelial-Endothelial-Gen_Cap|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

ATRX RNF213 BIRC6 BPTF MACF1 FSCN1 FAM135A PCNT

1.20e-062001738dccec522ab0d7fff62ad6273b02aa9022dbbb8eb
ToppCellLPS_IL1RA-Mesenchymal_myocytic-Myofibroblastic|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 ATP1A4 TNXB

1.20e-06200173887827041663013f5e7273168dc8709d69840e7ce
ToppCellLPS_IL1RA-Mesenchymal_myocytic-Myofibroblastic-Myofibroblast|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 ATP1A4 LONRF2

1.20e-0620017388988f113708eef7d9d2a6a6c1bcfd7c8f9804d3e
ToppCellAdult-Mesenchymal-airway_smooth_muscle_cell-D231|Adult / Lineage, Cell type, age group and donor

MYLK CALD1 MYOM1 NRCAM SSC5D ASB2 MN1

3.13e-061601737d783d29150033e9181c0e30870070268fed3fd85
ToppCelldroplet-Lung-21m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l15|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

FOXN2 NCKIPSD SREBF2 ANKRD26 C1RL FGD1 CDYL

3.84e-06165173794a5211072464fc24592bb107a853ce832e816fe
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

CUX2 MYLK USP43 CLMN PLCH2 CNTN5 ASB2

4.67e-0617017373174ea9cf93892a8b41de10fd4ff6f06bb41502d
ToppCell356C-Myeloid-Dendritic-cDC1|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

MYOM1 IDO1 MAP3K14 DSCAML1 DMD ASB2 CNR2

4.85e-0617117373d60e7ecf25e4b781ba2387671b2aad247fb75ff
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-ASMC|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

MYLK CALD1 MYOM1 RBM20 DMD ASB2 HSPB7

5.24e-061731737cb6389536195443633adb06e5f1b7483530773d1
ToppCell5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CYP4V2 COL6A3 MYLK CALD1 PCDHA10 SSC5D TNXB

7.05e-061811737b116c68393d8836bac080f81a8fcbeb52e0403e7
ToppCellwk_15-18-Mesenchymal-Myofibro_&_SMC-Early_airway_SMC_2|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

MYLK MYOM1 NRCAM DMD ASB2 MN1 HSPB7

7.57e-061831737a1d4f25e13f5b9e92a9ca0a804a7bed5df8fb2fe
ToppCellLPS_only-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A3 MYLK CALD1 SSC5D ZFHX4 DMD TNXB

7.57e-06183173712daaea821e49bc94a01e2496331e92a80d27339
ToppCellCOVID-19-Heart-CM_1|COVID-19 / Disease (COVID-19 only), tissue and cell type

MYOM1 CMYA5 RBM20 TRIM55 DMD ASB2 HSPB7

7.84e-061841737e737f0f14c49b07bbb04a165083ac32210bc5690
ToppCellControl-Fibroblasts-Alveolar_FB|Control / group, cell type (main and fine annotations)

COL6A3 FRAS1 MYLK CALD1 SYN3 MACF1 TNXB

8.72e-06187173792d468dde81125d51daf7abd4703741abe1ab91c
ToppCellhuman_hepatoblastoma-Tumor_cells-T2|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

CUX2 NR6A1 DSCAML1 CLMN ZNF638 DMD GPT2

8.72e-061871737f3e37c18ac6471c7992609bbddfa4975571c815c
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-24m-Neuronal-neuron|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF831 SPTBN4 CELSR2 PLCH2 ATP1A3 GOLGA8A EPHA10

8.72e-061871737e04a84989d624378141042768383b9c846901f2d
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-24m-Neuronal-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF831 SPTBN4 CELSR2 PLCH2 ATP1A3 GOLGA8A EPHA10

8.72e-06187173724cc03c748e15f7ef0e6509ca5a6ca583fb9c573
ToppCellControl-Fibroblasts-Other_FB|Control / group, cell type (main and fine annotations)

COL6A3 MYLK CALD1 NRCAM SSC5D DMD TNXB

8.72e-061871737bd3739c4a52aa1ba5deffd778e113a9800f7e158
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-24m-Neuronal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF831 SPTBN4 CELSR2 PLCH2 ATP1A3 GOLGA8A EPHA10

8.72e-0618717372f153b203fe79f206319603cf94d3a03ab49a05d
ToppCellLPS-IL1RA-Stromal_mesenchymal-Lung_smooth_muscle-Myofibroblast|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A3 MYLK CALD1 SSC5D DMD ASB2 LONRF2

9.02e-0618817373177b2c1723268d330d3e9f24f9e24492ace6286
ToppCellLPS-antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-Myofibroblast|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL6A3 MYLK CALD1 SSC5D DMD ASB2 HSPB7

9.02e-061881737293f2fa99f5f96aa7fd2b2a5cc94ff60eeaabe11
ToppCellCOPD-Stromal-SMC|Stromal / Disease state, Lineage and Cell class

CALD1 TMEM38B RBM20 CLMN DMD ASB2 HSPB7

9.02e-0618817379ffef4b01d0ddd6913c9ed6be79aeaaabd5e41ed
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_1-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

KRT19 SEPTIN9 SREBF2 NR6A1 CLMN LONRF2 FAM135A

9.02e-06188173743a3a59f92ad93509d4166bd025aed0b1b39a008
ToppCellfacs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l39|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

MYLK CALD1 MYOM1 TMEM38B DMD ASB2 HSPB7

9.02e-061881737a5e7a363fbd5ae4d9312cf6f9941413d6a5c0b4d
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

COL6A3 CALD1 CDH23 ZFHX4 LONRF2 MN1 TNXB

1.00e-0519117372c51850f5c559d665b8a27a12b75af9ed58dffe1
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-AF1|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

COL6A3 FRAS1 MYLK CALD1 SYN3 MACF1 TNXB

1.00e-0519117376688cee34beee4f151ac17fccbc9c26a9aad72e1
ToppCellhuman_hepatoblastoma-Tumor_cells|World / Sample and Cell Type and Tumor Cluster (all cells)

FRAS1 ARID4B RB1CC1 RRBP1 BPTF ZNF638 ZNF292

1.03e-051921737916fbec1c7ab7969bda711886ac88e877e30c280
ToppCellH1299-infected|H1299 / Cell line, Condition and Strain

TCOF1 FANCA BPTF ANKRD11 GOLGA8A AHNAK2 ZNF292

1.03e-0519217379cf8049bdc3e0f81ce69042beac72b08d8f38b4e
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

COL6A3 FRAS1 MYLK CALD1 SYN3 MACF1 TNXB

1.03e-05192173799ce9e3c4c50cf64ebb62145f2b5420efa0db309
ToppCellIPF-Stromal-SMC|Stromal / Disease state, Lineage and Cell class

MYOM1 TMEM38B RBM20 CLMN DMD ASB2 HSPB7

1.03e-0519217379b06c7336624ef21f8e5393725b56038a8028e57
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_C_(IT_L4_RORB)-Exc_L4_RORB_BHLHE22|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

CUX2 PHACTR2 MYLK SYN3 CMYA5 CLMN SCN9A

1.03e-05192173725460ca9ebd3d49f666394cf99ab77a5e8f77250
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Mesenchymal-brain_pericyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYLK CALD1 MYOM1 TMEM38B ASB2 MN1 HSPB7

1.07e-05193173718e11d515147accef9aee26e934b358b445e18e2
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL6A3 MYLK CALD1 SYN3 CDH23 MACF1 TNXB

1.07e-051931737b3ad5ff480d99217f36cc7471e5a96a519ddb409
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Mesenchymal|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYLK CALD1 MYOM1 TMEM38B ASB2 MN1 HSPB7

1.07e-0519317377766f495f2f945802ef9a5b994cd00bb64d0dfe3
ToppCellhuman_hepatoblastoma|World / Sample and Cell Type and Tumor Cluster (all cells)

FRAS1 ARID4B RB1CC1 RRBP1 BPTF ZNF638 ZNF292

1.07e-051931737e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCellfacs-Brain_Non-Myeloid-Cerebellum_-18m-Mesenchymal-Pericyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYLK CALD1 MYOM1 TMEM38B ASB2 MN1 HSPB7

1.07e-051931737ce3e8cf30b7b4d5c7a8f3d64c21d81d2c3cab5c1
ToppCell3'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 MYLK CALD1 NRCAM SSC5D TNXB HSPB7

1.11e-0519417378fae8061b350336299aa81f378e07deadbd55123
ToppCelldroplet-Limb_Muscle-MUSCLE|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ARID4B ATRX RB1CC1 RRBP1 ANKRD11 MACF1 FSCN1

1.11e-051941737e3d63874111d1e8da3977329426e4dcf68d6de87
ToppCellParenchymal-10x3prime_v2-Immune_Myeloid-Dendritic_cell-DC_1|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

IDO1 TCOF1 MAP3K14 SSC5D CELSR2 ASB2 FAM135A

1.11e-0519417375a048bd2af30975fdc57ff40bc49aa5811c830d8
ToppCellRA-03._Atrial_Cardiomyocyte|World / Chamber and Cluster_Paper

FRAS1 CALD1 MYOM1 CMYA5 RBM20 TRIM55 DMD

1.11e-05194173789812fb164065041357bb37a3c2d87028ec3de4e
ToppCellRA-03._Atrial_Cardiomyocyte|RA / Chamber and Cluster_Paper

FRAS1 CALD1 MYOM1 CMYA5 RBM20 TRIM55 DMD

1.11e-051941737c3535f7cc0076653c72db582047cff053c322397
ToppCell3'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 MYLK CALD1 NRCAM SSC5D TNXB HSPB7

1.11e-0519417374d7d24390fdb379f943ddcc70a63f23955e10163
ToppCellTCGA-Thryoid-Primary_Tumor-Thyroid_Papillary_Carcinoma-Classical|TCGA-Thryoid / Sample_Type by Project: Shred V9

NRCAM KRT19 SEPTIN9 SLC34A2 SYTL5 PALM AGRN

1.11e-051941737b46c54802b8d1e0a0a17f9ed8e82eaf5e7f4849d
ToppCell3'_v3-blood-Lymphocytic_NK-NK_CD56bright_CD16-|blood / Manually curated celltypes from each tissue

ARID4B BCL3 RRBP1 ANKRD11 GOLGA8A MVD CNR2

1.14e-0519517371470f562ebcfe7da367964ecfd6c7f43bcdb4a73
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL6A3 MYLK CALD1 MYOM1 CNTN5 DMD ASB2

1.18e-0519617371522958a92e0126326a9f0d9fb1c5b5c50b001ea
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn-38|World / Primary Cells by Cluster

CUX2 ARID4B CALD1 ATRX CELSR2 ZFHX4 ZNF292

1.18e-05196173738da0751941adca650fe9b383d9f343153978eb5
ToppCellBasal_cells-Myositis-ILD_01|World / lung cells shred on cell class, cell subclass, sample id

FRAS1 CALD1 KRT19 CMYA5 CELSR2 PLCH2 GOLGA8A

1.18e-0519617373b66f3a79b3f2ebacb4ad646f179e505ab38d6f0
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-IPC/newborn|World / Primary Cells by Cluster

CUX2 ARID4B CALD1 ATRX CELSR2 ZFHX4 ZNF292

1.18e-051961737721650a08d260faf530dbd52d4e9275d27f3bac2
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL6A3 MYLK CALD1 MYOM1 CNTN5 DMD ASB2

1.18e-0519617371c8294014713684b50885e638668f2ce75f357f0
ToppCell367C-Fibroblasts-Fibroblast-K_(Pericytes)|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

MYLK CALD1 MYOM1 TMEM38B CLMN DMD HSPB7

1.18e-0519617371d94cecd378a829dd8014fc086d7fca48c953a91
ToppCell367C-Fibroblasts-Fibroblast-K_(Pericytes)-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

MYLK CALD1 MYOM1 TMEM38B CLMN DMD HSPB7

1.18e-051961737aacec48285bcb7ccf1b538187071885e3602cc49
ToppCellBronchial-NucSeq-Stromal-Myofibroblastic-Muscle_smooth_pulmonary|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MYLK CALD1 MYOM1 RBM20 DMD ASB2 HSPB7

1.22e-051971737bf0520a94ebb1d2f94de9f526d17e0b0e8fe7052
ToppCellBasal_cells|World / lung cells shred on cell class, cell subclass, sample id

FRAS1 CALD1 KRT19 CMYA5 CELSR2 PLCH2 GOLGA8A

1.22e-05197173724360b660000bdfb999d58fbf4e29585a97e1785
ToppCellTransverse-B_cell-B_cell_IgG_Plasma|B_cell / Region, Cell class and subclass

BNIP5 COL6A3 MUC16 BCL3 FAM186B FAM83H PIK3R5

1.22e-051971737a0a096e8e80763a92d5d7396eb678a4587771a3a
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

ARID4B RNF213 BCL3 XRN1 ANKRD11 USP15 ZNF292

1.22e-0519717375c33454b10023decd2f5ccda9229b6512659711e
ToppCellTracheal-NucSeq-Stromal-Myofibroblastic-Muscle_smooth_pulmonary|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MYLK CALD1 MYOM1 NRCAM CDH23 ASB2 MN1

1.22e-051971737ac4f53acb2f8a428b0f2fab3c30a34e095a1bed7
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

ARID4B RNF213 BCL3 XRN1 ANKRD11 USP15 ZNF292

1.26e-05198173744417089b62056269cac38d3134ff209c05b7007
ToppCellParenchymal-NucSeq-Immune_Myeloid-Dendritic_cell-DC_1|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

IDO1 TCOF1 CDH23 VAC14 ASB2 GPT2 PIK3R5

1.26e-051981737fa5c15a656d4132950092919600e270f1fd79abf
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

ARID4B RNF213 BCL3 XRN1 ANKRD11 USP15 ZNF292

1.26e-05198173728ef3fc4c17dcb765537b75917f7db78baa522db
ToppCell(00)_Basal-(2)_GFP_FOXI1|(00)_Basal / shred by cell type by condition

CALD1 ATRX ANKRD26 RB1CC1 BPTF ANKRD11 ZNF292

1.31e-05199173719674e1eaeb51e4196d847cb62aa437c852951d3
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

ARID4B ATRX ANKRD26 RB1CC1 BPTF ANKRD11 ZNF292

1.31e-051991737fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

PHACTR2 ATRX IDO1 RB1CC1 BPTF ANKRD11 ZNF292

1.31e-051991737c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCellLPS_IL1RA-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D ZFHX4 DMD TNXB

1.31e-0519917376b3a0e5d52a30d0eed30e6a670f5b53bc233f70c
ToppCell(01)_IL1RL1+-(2)_GFP_FOXI1|(01)_IL1RL1+ / shred by cell type by condition

CALD1 ATRX ANKRD26 RB1CC1 BPTF ANKRD11 ZNF292

1.31e-051991737a2f7d0cabf35b80fe239fae34a77bf9344d5d743
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK NRCAM SPECC1L MICALL2 MACF1 TNXB

1.35e-0520017379b0916d8d07ac2bf1739f7be5296bf77ffee6094
ToppCellControl_saline-Mesenchymal_myocytic-Myofibroblastic-Myofibroblast|Control_saline / Treatment groups by lineage, cell group, cell type

MYLK CALD1 SSC5D DMD ASB2 ATP1A4 LONRF2

1.35e-052001737c5e051f1aac8dda376c342a9932785a23450e073
ToppCellLPS_anti-TNF-Mesenchymal_myocytic-Pericyte-Pericyte_3|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

MYLK CALD1 MYOM1 DMD ASB2 ATP1A4 HSPB7

1.35e-0520017379169a9ec8e9ab95d90a64c5a19ac666a5cf82313
ToppCellBronchus_Control_(B.)-Epithelial-TX-Club|Bronchus_Control_(B.) / Sample group, Lineage and Cell type

KRT19 MUC16 RRBP1 CMYA5 SYTL5 GPT2 MVD

1.35e-052001737292c63693eb7f435335a8cfba07aa35b72139393
ToppCellBronchial-NucSeq-Stromal-Myofibroblastic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MYLK CALD1 MYOM1 RBM20 DMD ASB2 HSPB7

1.35e-052001737a66449b22b39dd6987fc2c3ed160d24564234ced
ToppCellControl_saline-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast|Control_saline / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D ZFHX4 DMD TNXB

1.35e-052001737a799fc7bb83ad0524362cb5010df949741fb7bf3
ToppCellControl_saline-Mesenchymal_myocytic|Control_saline / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 ATP1A4

1.35e-0520017375ed4261157cd51109b314818133ac3a0d34ee5fa
ToppCellLPS_anti-TNF-Mesenchymal_myocytic-Myofibroblastic-Myofibroblast|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 ATP1A4

1.35e-052001737c596a53c0b63c9deaac7d99fcbdd94ecfa96b86c
ToppCellLPS_anti-TNF-Mesenchymal_myocytic|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 ATP1A4

1.35e-05200173767dcbd86fbc79fd585d0793f979e4aac100326c9
ToppCellLPS_only-Mesenchymal_myocytic-Myofibroblastic-MatrixFB_->_Myofibroblast|LPS_only / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D ZFHX4 DMD TNXB

1.35e-052001737a9ff3210127000b3dd9e97136163c98c2b0817d7
ToppCellLPS_only-Mesenchymal_myocytic-Myofibroblastic|LPS_only / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK CALD1 SSC5D DMD ASB2 TNXB

1.35e-05200173702cae2c296a13ad4cbb53bca7a86d64629d67d66
ToppCellLPS_IL1RA_TNF-Mesenchymal_myocytic-Myofibroblastic-Myofibroblast|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

MYLK CALD1 SSC5D DMD ASB2 ATP1A4 LONRF2

1.35e-052001737dcdaec3ca3a3024dc1b8788c417003f84c2bffdc
ToppCellCOVID-19|World / Disease, condition lineage and cell class

ARID4B RNF213 BPTF XRN1 ANKRD11 MACF1 USP15

1.35e-0520017377dec470c379cd89f05a0f37c8628b21f136e52f0
ToppCelltumor_Lung-Epithelial_cells-tS2|Epithelial_cells / Location, Cell class and cell subclass

KRT19 SEPTIN9 MUC16 RNF213 PLEC FSCN1 AGRN

1.35e-052001737caa2645d4d96f76e8c9800fe45afbfac8bd34bd9
ToppCellControl_saline-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|Control_saline / Treatment groups by lineage, cell group, cell type

COL6A3 MYLK NRCAM SPECC1L MICALL2 MACF1 TNXB

1.35e-052001737bd8cf33502adea320e91ca2af14e1911d88ad374
ToppCellBAL-Mild-Myeloid-cDC-cDC-cDC_4|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

MYOM1 MAP3K14 MUC16 ATG14 FSCN1 CCDC144A

2.68e-0515017367a381f5ae94eba5eb60dcbf83416b4eb18c279ea
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

ATRX BPTF ANKRD11 MACF1 ZNF292

9.11e-05491015GAVISH_3CA_METAPROGRAM_CD8_T_CELLS_CHROMATIN
DrugDenatonium benzoate [3734-33-6]; Down 200; 9uM; HL60; HT_HG-U133A

NRCAM SEPTIN9 ANKRD26 GON4L SPATA2 CELSR2 PLEC FSCN1 AGRN SYMPK

2.01e-06191172103123_DN
DrugQuercetine dihydrate [6151-25-3]; Down 200; 11.8uM; MCF7; HT_HG-U133A

ARID4B NOL12 SREBF2 RRBP1 SCAPER SAFB2 PLEC FSCN1 MVD ZNF292

2.21e-06193172104846_DN
DrugDiclofenac sodium [15307-79-6]; Down 200; 12.6uM; MCF7; HT_HG-U133A

ZNF787 FOXN2 RTEL1 NOL12 RRBP1 ZGPAT ZNF335 SAFB2 PLEC KIF1C

2.91e-06199172102756_DN
DrugEthamivan [304-84-7]; Down 200; 18uM; PC3; HT_HG-U133A

MYLK MAP3K14 RB1CC1 SPATA2 USP5 MICALL2 SMARCC1 SMARCC2 AGRN

1.75e-0519417297260_DN
DrugArcaine sulfate [14923-17-2]; Up 200; 14.8uM; MCF7; HT_HG-U133A

RTEL1 ANKRD26 GON4L SLC34A2 VAC14 ZFHX4 RBM19 FGD1 FSCN1

1.90e-0519617294974_UP
DrugCefoxitin sodium salt [33564-30-6]; Up 200; 8.8uM; MCF7; HT_HG-U133A

FOXN2 CALD1 RTEL1 RRBP1 ZFHX4 RBM19 SMARCC2 MVD ZNF292

1.97e-0519717296796_UP
Drugchlorpropamide; Up 200; 100uM; MCF7; HG-U133A

ZNF787 MYLK RTEL1 SREBF2 NR6A1 RRBP1 PHF20L1 SMARCC2 PLEC

1.97e-051971729141_UP
DrugNimodipine [66085-59-4]; Up 200; 9.6uM; PC3; HT_HG-U133A

PHACTR2 CALD1 NOL12 SLC34A2 GRM6 CDC14B RBM19 SCAPER PALM

2.06e-0519817296320_UP
Drugrotenone; Down 200; 1uM; MCF7; HT_HG-U133A

ANKRD26 GON4L SLC34A2 NR6A1 LHX2 FGD1 PALM FSCN1 SYMPK

2.06e-0519817295915_DN
DrugTubocurarine chloride pentahydrate (+) [6989-98-6]; Down 200; 5.2uM; HL60; HG-U133A

NOL12 SREBF2 PPWD1 TMEM38B PHF20L1 ANKRD11 MTRR CDYL PSD4

2.14e-0519917291738_DN
Diseasenervous system disease (implicated_via_orthology)

ATP1A3 ATP1A4 KIF1C

3.91e-05121693DOID:863 (implicated_via_orthology)
DiseaseIntellectual Disability

CUX2 GON4L SPECC1L BPTF ZNF335 SCAPER SMARCC2 MACF1 GPT2 MN1 ZNF292

5.78e-0544716911C3714756
DiseaseMacrostomia

FRAS1 SPECC1L

1.94e-0441692C0024433
Diseaseserum gamma-glutamyl transferase measurement

FOXN2 CUX2 CALD1 ATRX SEPTIN9 GON4L SPECC1L PGM1 BPTF LRGUK CELSR2 DNMBP HSPB7 ZNF292 HDLBP

2.61e-0491416915EFO_0004532
Diseaseeosinophil count

CUX2 MAP3K14 NCKIPSD ATG14 BCL3 RRBP1 SPATA2 BPTF XRN1 ANKRD11 PLEC ASB2 USP15 TNXB PIK3R5 EPHA10 CNR2 ZNF292 SYMPK HDLBP

3.52e-04148816920EFO_0004842
Diseaseasthma

COL6A3 ARID4B RTEL1 MAP3K14 MUC16 SRGAP2 BCL3 LHX2 TRAP1 ANKRD11 MPND PCNT SYMPK

4.11e-0475116913MONDO_0004979
Diseasemyeloperoxidase measurement

TSPOAP1 RRBP1 TNXB

4.36e-04261693EFO_0005243
Diseasemeningioma (is_implicated_in)

MTRR MN1

4.82e-0461692DOID:3565 (is_implicated_in)
Diseasefamilial hemiplegic migraine (implicated_via_orthology)

ATP1A3 ATP1A4

6.72e-0471692DOID:0060178 (implicated_via_orthology)
DiseaseOvarian Mucinous Adenocarcinoma

MYLK MAP3K14 RPS6KC1

7.37e-04311693C1335167
Diseasecoffee consumption

CUX2 NRCAM FANCA

8.10e-04321693EFO_0004330
Diseasealcohol use disorder (implicated_via_orthology)

SREBF2 SMARCC1 SMARCC2 ATP1A3 ATP1A4 PSD4

9.36e-041951696DOID:1574 (implicated_via_orthology)
DiseaseAbnormality of the face

MN1 ZNF292

1.14e-0391692C4025871
Diseasepyoderma gangrenosum

SYN3 USP15

1.14e-0391692EFO_0006835
Diseaseopportunistic bacterial infectious disease (implicated_via_orthology)

SMARCC1 SMARCC2

1.14e-0391692DOID:0050340 (implicated_via_orthology)
DiseaseCoffin-Siris syndrome (implicated_via_orthology)

SMARCC1 SMARCC2

1.14e-0391692DOID:1925 (implicated_via_orthology)
Diseaseadseverin measurement

C1RL DNMBP

1.42e-03101692EFO_0801358
Diseaseskin microbiome measurement

PHACTR2 SRGAP2 LHX2

1.45e-03391693EFO_0801228
Diseasecomplement C1q tumor necrosis factor-related protein 1 measurement

CDH23 CELSR2

2.07e-03121692EFO_0801493
Diseasegranulins measurement

CDH23 CELSR2

2.07e-03121692EFO_0008141
Diseaseepilepsy (implicated_via_orthology)

NRCAM SCN9A CDYL ATP1A3 ATP1A4

2.53e-031631695DOID:1826 (implicated_via_orthology)
DiseaseHypermetropia

SEPTIN9 DSCAML1 ANKRD11 AGRN

2.96e-031031694HP_0000540
DiseaseLeukemia, Myelocytic, Acute

SEPTIN9 FANCA MN1 AGRN CNR2

3.27e-031731695C0023467
DiseaseMalignant neoplasm of breast

NRCAM IDO1 LRRC37A2 SREBF2 MAGEE1 RB1CC1 GRM6 HOXD11 MACF1 DMD ZNHIT2 GEN1 CNR2 HDLBP

3.64e-03107416914C0006142
Diseasepreeclampsia, parental genotype effect measurement

CCHCR1 ZNF831

3.71e-03161692EFO_0000668, EFO_0005939
Diseaselipoprotein A measurement

BCL3 DSCAML1 ZGPAT CELSR2

3.99e-031121694EFO_0006925
DiseaseDystonia, Limb

COL6A3 ATP1A3

4.19e-03171692C0751093
DiseaseDystonia, Diurnal

COL6A3 ATP1A3

4.19e-03171692C0393610
DiseaseMoyamoya Disease

RNF213 PCNT

4.19e-03171692C0026654
DiseaseNeoplasm Invasiveness

MYLK KRT19 SEPTIN9 SLC39A10 DMD

4.24e-031841695C0027626
Diseasesevere acute respiratory syndrome, COVID-19

COL6A3 TRPC7 SEPTIN9 SRGAP2 PALM DMD GOLGA8A CNR2

4.38e-034471698EFO_0000694, MONDO_0100096
DiseaseDystonia, Paroxysmal

COL6A3 ATP1A3

4.70e-03181692C0393588
DiseaseFeeding difficulties

MN1 ZNF292

4.70e-03181692C0232466
DiseaseX-11470 measurement

VARS2 TNXB

5.23e-03191692EFO_0021241
Diseaseskin sensitivity to sun

FANCA ANKRD11

5.23e-03191692EFO_0004795
Diseaseperipheral neuropathy, response to docetaxel trihydrate

TRPC7 VAC14

5.23e-03191692EFO_0003100, GO_1902519
Diseasecholesterol:total lipids ratio, high density lipoprotein cholesterol measurement

NRCAM BCL3 BIRC6 BPTF CELSR2 MACF1

5.28e-032761696EFO_0004612, EFO_0020943

Protein segments in the cluster

PeptideGeneStartEntry
PALASAATKERTESE

BARGIN

531

Q6ZT62
SAAAEASAVLKVRPE

GPT2

26

Q8TD30
TVEVNDRKAEFPSSG

ARID4B

1001

Q4LE39
AEDASRTGAVPVKTV

AMER2

316

Q8N7J2
DSPAVAAAPERKTSV

ACTL7B

366

Q9Y614
KTPDEAARLVEGTSA

ANKRD30B

301

Q9BXX2
DVKDGVDAVPAAIST

ANKRD11

2036

Q6UB99
RTIPDKIGSTSGAEA

BIRC6

3941

Q9NR09
VKTGVRDPADVSSES

ATG14

211

Q6ZNE5
VATLATEPGEDAFRK

ALKBH1

11

Q13686
ADGSTPTDAIVKEFL

CDC14B

286

O60729
PETTKEGLRAISDVS

APOF

271

Q13790
EQSLADKTRGPTTAE

ASB2

36

Q96Q27
IAGSADSKPIDVSRL

AIMP1

141

Q12904
DPKSELFGETARSIE

AGRN

1156

O00468
VDPTSGELDVKRAFA

AKTIP

151

Q9H8T0
VKRDISAQEGASPAS

SPECC1L

951

Q69YQ0
PTRTVEVDSKAAEIG

CYLC2

101

Q14093
SGDSADVARDVKQPT

DNMBP

1446

Q6XZF7
TEAGAVPSRKSPADV

EDN2

116

P20800
LDNSTRGTDVKDIPF

CCDC144CP

271

Q8IYA2
APVLRVTASDRDKGS

CELSR2

416

Q9HCU4
VADVFGSKDTESLEP

FAM186B

401

Q8IYM0
TPTTSGEDVRDFAKV

DMD

3361

P11532
SSLSEIDEDEGRPTK

ANKRD26

651

Q9UPS8
RTPETGSDDAIKSIL

CUX2

641

O14529
EEKVSDLASRGQEPS

BPTF

1316

Q12830
ADGSTPTDAIVKRFL

CDC14C

256

A4D256
TLTVVADDGGPKVDS

CDH23

1386

Q9H251
SGPRAEVETKATAIA

ARMCX4

81

Q5H9R4
AKTQSEARPGATVDA

ARMCX4

246

Q5H9R4
AVKSDSDGEQTEPRF

ATG2B

1321

Q96BY7
EAPRSSVTETEADGK

CNR2

331

P34972
AEGEPSAAPTDVKAT

CNTN5

871

O94779
PTSGALDRVASATKI

PGM1

336

P36871
DSSATPVLQERDSKG

RBM19

246

Q9Y4C8
AERKPAESETGLSLE

RBM20

1006

Q5T481
ESDVSSAPDKEAGRE

NPFFR2

16

Q9Y5X5
GDRSEEEASSTEKPT

NOL12

131

Q9UGY1
EVLERGDSAPATAKE

PALM

96

O75781
AKEPLSRATETGEAR

TSPOAP1

1571

O95153
ESEEGKAAISQLRSP

OXSR1

346

O95747
LAPEKAAVLDTGASI

EXO5

106

Q9H790
SPDTADAESGKEIRE

RB1CC1

266

Q8TDY2
LRPEKDSSATAVDAI

MUC16

12131

Q8WXI7
AGELTSPKSDSELEV

LPIN3

216

Q9BQK8
ESNPSVREFVLSKGD

IDO1

311

P14902
EVDSAPGTDLAKILS

KRT19

236

P08727
SVENTAEEKRLGSPA

LRRC37A3

1196

O60309
VSKTLGDRFSAPAVE

MYLK

136

Q15746
PIERKGDASSIVSAI

FRAS1

2691

Q86XX4
PRVTKASVDSDSEGP

MAGEE1

436

Q9HCI5
SVENAAEEKRLGSPA

LRRC37A2

1196

A6NM11
KTDNTGTLPEDVAFR

NUDT19

111

A8MXV4
DDPSRKIDGDTIIFS

NRCAM

406

Q92823
SRGSDDSVPVISFKD

RPS6KC1

661

Q96S38
EEPTSLFQRDSETKG

RPS6KC1

856

Q96S38
KVSFSRDAPVGEEEA

MTRR

606

Q9UBK8
VNGLPEKDRETDTSA

LAIR1

226

Q6GTX8
AGVKRASEDSEEEPS

MICALL2

116

Q8IY33
ESSVAGLSSPELKVR

FAM135A

446

Q9P2D6
STTKEAARVAPATGE

PNMA6F

476

A0A0J9YX94
KTEEGSVRGALPAVS

KIF1C

391

O43896
RTAAVPTVKDALDAA

MACF1

836

O94854
ADGKDSIARQVAPES

MVD

176

P53602
APAISSAIDRGDTET

LHX2

26

P50458
GASDSETEETRKALP

LRGUK

771

Q96M69
IKDVRTFPDGSSVVD

LONRF2

596

Q1L5Z9
ISSPEDISDSKREFG

ANKS4B

281

Q8N8V4
SGTSDLKGEPAETRV

PHACTR2

286

O75167
GSRPRKIDTIAADES

EPHA10

146

Q5JZY3
DVLAGVSAEDKSRRP

MPND

196

Q8N594
RKGSAVDASVQEESP

PCNT

41

O95613
GKLATATSLPEDTVR

PAX4

201

O43316
KASSRASVGVAPEVA

PCDHA10

676

Q9Y5I2
KPRAFGESSTESDEE

PPP1R11

66

O60927
DVDPTSVTSALREDG

HSPB7

131

Q9UBY9
SSSDGTEKLPEREEI

ATRX

1011

P46100
TSTVAAPPKGEDAEA

GRM6

861

O15303
SEEAKRGAADVSSPE

BNIP5

306

P0C671
PAATTDQDKSEATRG

C2CD3

2301

Q4AC94
GVLKASAETVDPASL

FSCN1

476

Q16658
RTAVDGFQSESPEKL

CDYL

206

Q9Y232
GDDKATIPVTDAEFS

DSCAML1

1676

Q8TD84
SAAEEKPEDAALGVR

FANCA

626

O15360
EKGEREASSSVAAIP

CMYA5

1136

Q8N3K9
VSPERAGDTETLKDI

COL6A3

221

P12111
EAGAEKSSSAVAPQR

HOXD11

251

P31277
ESDVESTASSPRGAK

GON4L

391

Q3T8J9
EAGTPSLDSEAKEVA

BCL9L

126

Q86UU0
ESSTDIKAPEGFAVR

C1RL

66

Q9NZP8
LDNSTRGTDVKDIPF

CCDC144B

321

Q3MJ40
SAVEPSDEIKRASGD

DENND4C

1601

Q5VZ89
AAAVPTRESIKGSLS

CCHCR1

731

Q8TD31
DVFGKSDRPATVEDL

CYP4V2

361

Q6ZWL3
PVLKRDVAGDASESA

ATP1A3

431

P13637
IEKREPGSGTESDTS

MEAF6

111

Q9HAF1
AVDAARPKATLVDSE

FOXN2

36

P32314
KSEVESELSAIPDGF

GEN1

611

Q17RS7
SESTRVLESPDGKSE

FAM186A

651

A6NE01
LDNSTRGTDVKDIPF

CCDC144A

321

A2RUR9
PGGEAVRSAASTKVA

FAM83H

721

Q6ZRV2
VETVPATKEDSRFLG

GPRIN1

361

Q7Z2K8
ADIDAVDIKSGRSPL

BCL3

266

P20749
ESTAPAEALKDGEER

SCAPER

851

Q9BY12
LKPLAGTDDSVVSED

SLC39A10

561

Q9ULF5
PGTEVTRLSAEDADA

CDH16

351

O75309
SEADSEAGELRKPTQ

PPEF2

421

O14830
TAKEGSEAGPAAISI

MAP3K14

66

Q99558
DLSRGSEVTAPVASD

PHF20L1

476

A8MW92
TDDVGDAKARASVPT

MN1

1286

Q10571
AELDPGTISVSDDRA

NR6A1

41

Q15406
TSAEKEPEAAVPASG

GOLGA8A

426

A7E2F4
PSVRGEDAVSEAKSP

RTEL1

766

Q9NZ71
PEDLIAAFTETRDKG

RTN3

651

O95197
DSEDTVSIRSKSVPG

SYTL5

336

Q8TDW5
ATLEAEIAGESKSPA

VARS2

56

Q5ST30
TSQRGTPSEDEAKAE

SYN3

551

O14994
KDLEVLAEIASSPAG

VAC14

461

Q08AM6
RGEVASKPSELVSGS

RPGRIP1

186

Q96KN7
EEAPAGTRSQVKASE

TCOF1

281

Q13428
AEVEAGKDASSRDPV

NKX1-2

51

Q9UD57
ATQAEGPKRVSDSAI

PPWD1

481

Q96BP3
EKVPNRDSGIDSISS

FGD1

276

P98174
EEVKSEGTARPAETG

PSD4

516

Q8NDX1
PEVIIDKATSDDSGT

SCN9A

646

Q15858
DSSGPALKRSFEVEE

SEPTIN9

21

Q9UHD8
DPTSREDLAKGTTTA

SSC5D

886

A1L4H1
VDPRVASAAAKAALE

SMARCC1

706

Q92922
ASVVDPRVASAAAKS

SMARCC2

681

Q8TAQ2
GTTEEKAAAEAAVPR

NCKIPSD

296

Q9NZQ3
KAAAEAAVPRTIGAE

NCKIPSD

301

Q9NZQ3
SDTAPRERLIDAKTG

ARNTL

211

O00327
SAPGKSIEASVDVSA

AHNAK2

1176

Q8IVF2
SAPGKSIEASVDVSA

AHNAK2

1506

Q8IVF2
SAPGKSIEASVDVSE

AHNAK2

1671

Q8IVF2
SAPGKSIEASVDVSA

AHNAK2

1836

Q8IVF2
SAPGKSIEASVDVSA

AHNAK2

2496

Q8IVF2
VDVSAPKVEADGSLS

AHNAK2

2506

Q8IVF2
SAPGKSIEASVDVSE

AHNAK2

2826

Q8IVF2
RASVDTKEAEGAPQV

CALD1

516

Q05682
EILPIAKRATTGDAS

ATP1A4

446

Q13733
IPESSSDKVAGDIFL

CLMN

481

Q96JQ2
SREAQGEVPASDSKT

SLC34A2

671

O95436
VKDGDFLVRESATSP

SHC4

541

Q6S5L8
SRGSPNETELIESAK

RNF213

2901

Q63HN8
SLSLRKEPVATDVGD

SPATA2

271

Q9UM82
SEKSERDTPAAVTAE

ZFHX4

1256

Q86UP3
TAGEDEKSASPRSNV

USP43

856

Q70EL4
ERAAVSGKETSAPAA

TRIM55

491

Q9BYV6
KLRTAGPLESSETEE

RRBP1

1331

Q9P2E9
LSGDEDPKASTLRVV

PIK3R5

506

Q8WYR1
LSKDDVAPESGDTTV

RSL1D1

316

O76021
KSADDRGAEEPISVS

SOGA3

896

Q5TF21
IREGVSSTTPAKDAA

SCAF1

841

Q9H7N4
LTSKAEPTAGAVDRA

SYCE1

6

Q8N0S2
TRDTGSKGVADDVVP

PLCH2

951

O75038
DTEDGVVERSSPKSE

SRGAP2

786

O75044
RATPATEAGFEDEAK

SREBF2

646

Q12772
PVSVEAKTVARGDAS

TNXB

1656

P22105
EPASAAELSSVRKEE

ZNF292

2551

O60281
GVGSLASKPVDVASD

TMEM38B

266

Q9NVV0
IEKGETLPTEARFDS

XRN1

116

Q8IZH2
RETKGASAATGIPLE

USP15

946

Q9Y4E8
IASQIGAADKPRDVS

SPTBN4

1961

Q9H254
GAADKPRDVSSVEVL

SPTBN4

1966

Q9H254
AQDTSSVGPDRKLAE

SAFB2

241

Q14151
SEARDVFEKATVSAP

PLEC

3036

Q15149
PSVLFGADKDTEVAA

SYMPK

766

Q92797
ATPGRGEVESDKSVA

TOPAZ1

56

Q8N9V7
VKDASAAEPAAAERV

ZNHIT2

166

Q9UHR6
GRLFSTQTAEDKEEP

TRAP1

56

Q12931
STGARVIFPAAEDKD

HDLBP

756

Q00341
GDALVPAEDTDAKRT

ZNF831

576

Q5JPB2
AVVKSEDVEAGLASP

ZNF335

816

Q9H4Z2
PASDSFRSDVGKAVE

WDR7

291

Q9Y4E6
VDGLTDASSAFKVPR

ZP3

241

P21754
EELDSVPLVKSSAGD

PJA2

231

O43164
SETVPKAEAGPESAA

ZGPAT

101

Q8N5A5
DTDEFILPTGANKTR

TIMM23

56

O14925
GIKAARPEIADRATS

TOE1

406

Q96GM8
TFKGRGTPSIEDAES

TKTL1

216

P51854
EGRSAADSISESVPV

USP5

776

P45974
SSGKSVASDVPEELD

ZNF638

1906

Q14966
ASDRFEGVKTLPNET

TRPC7

406

Q9HCX4
SVRRAKGPEEAVAAD

ZNF787

216

Q6DD87
VSTEDSPRLEVESKG

MYOM1

1176

P52179