Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 HOXD1 NFKB1 NFKB2 POU3F1 USF1 PBX3 AR GFI1 IRX4 TLX2

1.38e-0712445516GO:0000978
GeneOntologyMolecularFunctioncis-regulatory region sequence-specific DNA binding

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 HOXD1 NFKB1 NFKB2 POU3F1 USF1 PBX3 AR GFI1 IRX4 TLX2

1.85e-0712715516GO:0000987
GeneOntologyMolecularFunctionDNA-binding transcription activator activity, RNA polymerase II-specific

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 NFKB1 NFKB2 PBX3 AR TLX2

2.99e-075605511GO:0001228
GeneOntologyMolecularFunctionDNA-binding transcription activator activity

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 NFKB1 NFKB2 PBX3 AR TLX2

3.33e-075665511GO:0001216
GeneOntologyMolecularFunctionDNA-binding transcription factor activity, RNA polymerase II-specific

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 HOXD1 NFKB1 NFKB2 POU3F1 USF1 PBX3 AR GFI1 IRX4 TLX2

7.63e-0714125516GO:0000981
GeneOntologyMolecularFunctionRNA polymerase II transcription regulatory region sequence-specific DNA binding

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 HOXD1 NFKB1 NFKB2 POU3F1 USF1 PBX3 AR GFI1 IRX4 TLX2

1.18e-0614595516GO:0000977
GeneOntologyBiologicalProcesspositive regulation of transcription by RNA polymerase II

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 SUPT6H NFKB1 NFKB2 POU3F1 MAPK7 USF1 PBX3 AR TLX2

1.77e-0613905415GO:0045944
GeneOntologyBiologicalProcessembryo development

HOXA7 HOXB1 HSPG2 HOXB3 KRT8 HOXD1 SUPT6H DLG3 MAPK7 PBX3 AR GFI1 EPN2 TLX2

1.37e-0514375414GO:0009790
GeneOntologyBiologicalProcessnegative regulation of calcidiol 1-monooxygenase activity

NFKB1 GFI1

2.01e-053542GO:0010956
GeneOntologyBiologicalProcessembryonic skeletal system development

HOXA7 HOXB1 HSPG2 HOXB3 HOXD1

4.24e-05148545GO:0048706
GeneOntologyBiologicalProcessnegative regulation of vitamin D biosynthetic process

NFKB1 GFI1

6.69e-055542GO:0010957
GeneOntologyBiologicalProcessembryonic organ development

HOXA7 HOXB1 HSPG2 HOXB3 KRT8 PBX3 GFI1 EPN2

9.85e-05561548GO:0048568
GeneOntologyBiologicalProcessregulation of calcidiol 1-monooxygenase activity

NFKB1 GFI1

1.40e-047542GO:0060558
GeneOntologyBiologicalProcessregulation of vitamin D biosynthetic process

NFKB1 GFI1

1.40e-047542GO:0060556
GeneOntologyBiologicalProcessembryonic skeletal system morphogenesis

HOXA7 HOXB1 HSPG2 HOXB3

1.90e-04109544GO:0048704
GeneOntologyBiologicalProcessrhombomere development

HOXB1 HOXB3

2.39e-049542GO:0021546
GeneOntologyBiologicalProcessvitamin D biosynthetic process

NFKB1 GFI1

2.99e-0410542GO:0042368
GeneOntologyBiologicalProcessnegative regulation of vitamin metabolic process

NFKB1 GFI1

2.99e-0410542GO:0046137
GeneOntologyBiologicalProcessnegative regulation of transcription by RNA polymerase II

SOX1 HOXA7 JUN HOXB3 NFKB1 PRDM13 POU3F1 AR GFI1 IRX4

3.54e-0410535410GO:0000122
GeneOntologyBiologicalProcessbrain development

SOX1 HOXB1 HSPG2 HOXB3 NEUROD2 PRDM13 POU3F1 PBX3 TRAPPC9

3.56e-04859549GO:0007420
GeneOntologyBiologicalProcessnegative regulation of hormone biosynthetic process

NFKB1 GFI1

3.64e-0411542GO:0032353
GeneOntologyBiologicalProcessanimal organ morphogenesis

SOX1 HOXA7 HOXB1 HSPG2 JUN HOXB3 NFKB1 PBX3 AR GFI1 IRX4

3.78e-0412695411GO:0009887
GeneOntologyBiologicalProcesspattern specification process

SOX1 HOXA7 HOXB1 HOXB3 PBX3 AR IRX4

4.23e-04526547GO:0007389
GeneOntologyBiologicalProcessembryonic morphogenesis

HOXA7 HOXB1 HSPG2 HOXB3 MAPK7 AR GFI1 TLX2

5.00e-04713548GO:0048598
GeneOntologyBiologicalProcesschordate embryonic development

HOXA7 HOXB1 HSPG2 HOXB3 KRT8 HOXD1 SUPT6H AR EPN2

5.25e-04906549GO:0043009
GeneOntologyBiologicalProcesshead development

SOX1 HOXB1 HSPG2 HOXB3 NEUROD2 PRDM13 POU3F1 PBX3 TRAPPC9

5.82e-04919549GO:0060322
GeneOntologyBiologicalProcessfat-soluble vitamin biosynthetic process

NFKB1 GFI1

6.00e-0414542GO:0042362
GeneOntologyBiologicalProcessresponse to water

KRT8 PKD2L1

6.00e-0414542GO:0009415
GeneOntologyBiologicalProcessembryo development ending in birth or egg hatching

HOXA7 HOXB1 HSPG2 HOXB3 KRT8 HOXD1 SUPT6H AR EPN2

6.29e-04929549GO:0009792
GeneOntologyBiologicalProcessnegative regulation of monooxygenase activity

NFKB1 GFI1

6.91e-0415542GO:0032769
GeneOntologyCellularComponentchromatin

SOX1 HOXA7 HOXB1 JUN HOXB3 ARID1B NEUROD2 HOXD1 NFKB1 NFKB2 POU3F1 USF1 PBX3 AR IRX4 TLX2

5.89e-0714805416GO:0000785
GeneOntologyCellularComponentI-kappaB/NF-kappaB complex

NFKB1 NFKB2

3.92e-054542GO:0033256
DomainGOLGA6L

GOLGA6L10 GOLGA6L19 GOLGA6L9 GOLGA6L4

1.25e-096584IPR026737
DomainHomeobox_CS

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

1.04e-07186588IPR017970
DomainGOLGA2L5

GOLGA6L10 GOLGA6L19 GOLGA6L9 GOLGA6L4

2.48e-0718584PF15070
DomainGolgin_A

GOLGA6L10 GOLGA6L19 GOLGA6L9 GOLGA6L4

2.48e-0718584IPR024858
DomainHomeobox

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

6.02e-07234588PF00046
DomainHOMEOBOX_1

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

6.42e-07236588PS00027
DomainHOX

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

6.63e-07237588SM00389
DomainHOMEOBOX_2

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

7.06e-07239588PS50071
DomainHomeobox_dom

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

7.06e-07239588IPR001356
DomainANTENNAPEDIA

HOXA7 HOXB1 HOXB3 HOXD1

8.49e-0724584PS00032
Domain-

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

2.50e-062835881.10.10.60
DomainHomeodomain-like

HOXA7 HOXB1 HOXB3 HOXD1 POU3F1 PBX3 IRX4 TLX2

8.10e-06332588IPR009057
DomainHomeobox_metazoa

HOXA7 HOXB1 HOXB3 HOXD1 TLX2

8.70e-0690585IPR020479
DomainHomeobox_Antennapedia_CS

HOXA7 HOXB3 HOXD1

3.63e-0521583IPR001827
DomainRHD_CS

NFKB1 NFKB2

9.42e-055582IPR030492
DomainIPT_NFkappaB

NFKB1 NFKB2

9.42e-055582IPR033926
DomainRHD_dimer

NFKB1 NFKB2

4.20e-0410582IPR032397
DomainRHD_dimer

NFKB1 NFKB2

4.20e-0410582PF16179
DomainNFkB/Dor

NFKB1 NFKB2

4.20e-0410582IPR000451
DomainREL_1

NFKB1 NFKB2

4.20e-0410582PS01204
DomainRHD_DNA_bind_dom

NFKB1 NFKB2

4.20e-0410582IPR011539
DomainRHD_DNA_bind

NFKB1 NFKB2

4.20e-0410582PF00554
DomainREL_2

NFKB1 NFKB2

4.20e-0410582PS50254
Domain-

NFKB1 NFKB2

4.20e-04105822.60.40.340
DomainIPT

NFKB1 NFKB2

3.16e-0327582SM00429
DomainDEATH

NFKB1 NFKB2

3.16e-0327582SM00005
Domain-

HSPG2 CELSR3 LMAN2

3.21e-03955832.60.120.200
DomainEGF_LAM_2

HSPG2 CELSR3

3.90e-0330582PS50027
DomainEGF_LAM_1

HSPG2 CELSR3

3.90e-0330582PS01248
DomainIg_E-set

FLNB NFKB1 NFKB2

4.14e-03104583IPR014756
DomainIPT

NFKB1 NFKB2

4.43e-0332582IPR002909
DomainDeath

NFKB1 NFKB2

4.70e-0333582PF00531
DomainConA-like_dom

HSPG2 CELSR3 LMAN2 SPSB2

4.76e-03219584IPR013320
DomainLaminin_EGF

HSPG2 CELSR3

5.28e-0335582PF00053
DomainEGF_Lam

HSPG2 CELSR3

5.28e-0335582SM00180
DomainDeath_domain

NFKB1 NFKB2

6.20e-0338582IPR000488
DomainDEATH_DOMAIN

NFKB1 NFKB2

6.20e-0338582PS50017
DomainLAM_G_DOMAIN

HSPG2 CELSR3

6.20e-0338582PS50025
DomainLaminin_EGF

HSPG2 CELSR3

6.20e-0338582IPR002049
DomainLaminin_G_2

HSPG2 CELSR3

6.85e-0340582PF02210
DomainKeratin_I

KRT8 KRT35

8.25e-0344582IPR002957
DomainLamG

HSPG2 CELSR3

8.25e-0344582SM00282
PathwayREACTOME_DEVELOPMENTAL_BIOLOGY

SOX1 HOXB1 JUN HOXB3 KRT8 ARID1B HOXD1 KRTAP13-2 KRT35 NFKB1 PSMD1 DLG3 POU3F1 MAPK7 OCLN USF1 GFI1

1.18e-0614324617M509
PathwayWP_NONGENOMIC_ACTIONS_OF_125_DIHYDROXYVITAMIN_D3

JUN NFKB1 NFKB2 MAPK7

1.02e-0475464M39568
PathwayREACTOME_MYD88_MAL_TIRAP_CASCADE_INITIATED_ON_PLASMA_MEMBRANE

JUN NFKB1 NFKB2 MAPK7

1.66e-0485464MM14645
PathwayREACTOME_DEX_H_BOX_HELICASES_ACTIVATE_TYPE_I_IFN_AND_INFLAMMATORY_CYTOKINES_PRODUCTION

NFKB1 NFKB2

2.16e-047462MM14930
PathwayREACTOME_IKBA_VARIANT_LEADS_TO_EDA_ID

NFKB1 NFKB2

2.16e-047462M27463
PathwayREACTOME_DEX_H_BOX_HELICASES_ACTIVATE_TYPE_I_IFN_AND_INFLAMMATORY_CYTOKINES_PRODUCTION

NFKB1 NFKB2

2.16e-047462M27227
PathwayPID_P38_ALPHA_BETA_DOWNSTREAM_PATHWAY

JUN KRT8 USF1

2.53e-0438463M229
PathwayWP_NEURAL_CREST_DIFFERENTIATION

HOXB1 NFKB1 NFKB2 TLX2

2.75e-0497464MM15926
PathwayREACTOME_TOLL_LIKE_RECEPTOR_9_TLR9_CASCADE

JUN NFKB1 NFKB2 MAPK7

2.98e-0499464MM14660
PathwayWP_NEURAL_CREST_DIFFERENTIATION

HOXB1 NFKB1 NFKB2 TLX2

3.22e-04101464M39448
PathwayWP_TNFRELATED_WEAK_INDUCER_OF_APOPTOSIS_TWEAK_SIGNALING

JUN NFKB1 NFKB2

3.41e-0442463M39452
PathwayBIOCARTA_PCAF_PATHWAY

JUN NFKB1

3.70e-049462MM1533
PathwayREACTOME_INTERLEUKIN_1_PROCESSING

NFKB1 NFKB2

3.70e-049462M27383
PathwayREACTOME_INTERLEUKIN_1_PROCESSING

NFKB1 NFKB2

3.70e-049462MM15129
PathwayREACTOME_MYD88_INDEPENDENT_TLR4_CASCADE

JUN NFKB1 NFKB2 MAPK7

4.30e-04109464M29565
PathwayREACTOME_TOLL_LIKE_RECEPTOR_9_TLR9_CASCADE

JUN NFKB1 NFKB2 MAPK7

4.30e-04109464M27012
PathwayBIOCARTA_KERATINOCYTE_PATHWAY

HOXA7 JUN NFKB1

4.47e-0446463M19118
PathwayBIOCARTA_KERATINOCYTE_PATHWAY

HOXA7 JUN NFKB1

4.47e-0446463MM1428
PathwayREACTOME_FORMATION_OF_THE_POSTERIOR_NEURAL_PLATE

SOX1 POU3F1

4.61e-0410462M48036
PathwayREACTOME_TOLL_LIKE_RECEPTOR_TLR1_TLR2_CASCADE

JUN NFKB1 NFKB2 MAPK7

5.27e-04115464M27013
PathwayREACTOME_FORMATION_OF_THE_ANTERIOR_NEURAL_PLATE

SOX1 POU3F1

5.62e-0411462M48031
PathwayWP_INCLUSION_BODY_MYOSITIS

NFKB1 NFKB2

5.62e-0411462M42545
PathwayREACTOME_TOLL_LIKE_RECEPTOR_4_TLR4_CASCADE

JUN NFKB1 NFKB2 MAPK7

6.58e-04122464MM14640
PathwayREACTOME_ACTIVATION_OF_ANTERIOR_HOX_GENES_IN_HINDBRAIN_DEVELOPMENT_DURING_EARLY_EMBRYOGENESIS

HOXB1 JUN HOXB3 HOXD1

6.58e-04122464M29689
PathwayWP_RANKLRANK_SIGNALING

JUN NFKB1 NFKB2

7.58e-0455463M39667
PathwayREACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM

FLNB JUN ILF3 NFKB1 NFKB2 PSMD1 MAPK7

7.79e-04472467MM14539
PathwayREACTOME_ZBP1_DAI_MEDIATED_INDUCTION_OF_TYPE_I_IFNS

NFKB1 NFKB2

7.94e-0413462MM14616
PathwayBIOCARTA_PCAF_PATHWAY

JUN NFKB1

7.94e-0413462M22007
PathwayREACTOME_GASTRULATION

SOX1 PSMD1 POU3F1 OCLN

8.11e-04129464M46433
PathwayWP_ECTODYSPLASIN_A_SIGNALING_IN_HAIR_FOLLICLE_DEVELOPMENT

NFKB1 NFKB2

9.25e-0414462MM15847
PathwayREACTOME_TRAF6_MEDIATED_NF_KB_ACTIVATION

NFKB1 NFKB2

9.25e-0414462MM15641
PathwayREACTOME_INTERLEUKIN_17_SIGNALING

JUN NFKB1 MAPK7

9.30e-0459463MM15128
PathwayBIOCARTA_CDMAC_PATHWAY

JUN NFKB1

1.06e-0315462MM1358
PathwayWP_MAPK_SIGNALING

FLNB JUN NFKB1 NFKB2 MAPK7

1.19e-03246465M39597
PathwayWP_QUERCETIN_AND_NFKB_AP1_INDUCED_APOPTOSIS

JUN NFKB1

1.21e-0316462M42567
PathwayREACTOME_THE_NLRP3_INFLAMMASOME

NFKB1 NFKB2

1.21e-0316462M1063
PathwayBIOCARTA_CDMAC_PATHWAY

JUN NFKB1

1.21e-0316462M4388
PathwayREACTOME_RIP_MEDIATED_NFKB_ACTIVATION_VIA_ZBP1

NFKB1 NFKB2

1.37e-0317462M583
PathwayBIOCARTA_41BB_PATHWAY

JUN NFKB1

1.54e-0318462M2064
PathwayBIOCARTA_41BB_PATHWAY

JUN NFKB1

1.54e-0318462MM1511
PathwayBIOCARTA_CARDIACEGF_PATHWAY

JUN NFKB1

1.54e-0318462M7552
PathwayWP_MYD88_DISTINCT_INPUTOUTPUT_PATHWAY

JUN NFKB1

1.54e-0318462M39478
PathwayBIOCARTA_CARDIACEGF_PATHWAY

JUN NFKB1

1.54e-0318462MM1479
PathwayREACTOME_INTERLEUKIN_17_SIGNALING

JUN NFKB1 MAPK7

1.59e-0371463M27382
PathwayREACTOME_TOLL_LIKE_RECEPTOR_CASCADES

JUN NFKB1 NFKB2 MAPK7

1.60e-03155464MM14665
PathwayKEGG_MAPK_SIGNALING_PATHWAY

FLNB JUN NFKB1 NFKB2 MAPK7

1.71e-03267465M10792
PathwayBIOCARTA_ATM_PATHWAY

JUN NFKB1

1.72e-0319462MM1351
PathwayWP_SUDDEN_INFANT_DEATH_SYNDROME_SIDS_SUSCEPTIBILITY_PATHWAYS

JUN NFKB1 NFKB2 AR

1.76e-03159464M39373
PathwayBIOCARTA_ATM_PATHWAY

JUN NFKB1

1.91e-0320462M10628
PathwayBIOCARTA_MAPK_PATHWAY

JUN NFKB1 MAPK7

1.94e-0376463MM1433
PathwayWP_EBV_LMP1_SIGNALING

NFKB1 NFKB2

2.10e-0321462MM15923
PathwayREACTOME_ZBP1_DAI_MEDIATED_INDUCTION_OF_TYPE_I_IFNS

NFKB1 NFKB2

2.10e-0321462M26978
PathwayREACTOME_INFLAMMASOMES

NFKB1 NFKB2

2.10e-0321462M1072
PathwayREACTOME_SIGNALING_BY_INTERLEUKINS

JUN NFKB1 NFKB2 PSMD1 MAPK7

2.13e-03281465MM15130
PathwayREACTOME_TOLL_LIKE_RECEPTOR_CASCADES

JUN NFKB1 NFKB2 MAPK7

2.25e-03170464M7494
PathwayBIOCARTA_MAPK_PATHWAY

JUN NFKB1 MAPK7

2.32e-0381463M13863
PathwayWP_EBSTEINBARR_VIRUS_LMP1_SIGNALING

NFKB1 NFKB2

2.52e-0323462M39410
PathwayWP_ESTROGEN_SIGNALING

JUN NFKB1

2.52e-0323462M39672
PathwayWP_FGF23_SIGNALING_IN_HYPOPHOSPHATEMIC_RICKETS_AND_RELATED_DISORDERS

NFKB1 NFKB2

2.52e-0323462M39862
PathwayWP_CANCER_IMMUNOTHERAPY_BY_PD1_BLOCKADE

JUN NFKB1

2.52e-0323462M39843
PathwayWP_LDL_INFLUENCE_ON_CD14_AND_TLR4

NFKB1 NFKB2

2.52e-0323462M45556
PathwayBIOCARTA_TOLL_PATHWAY

JUN NFKB1

2.75e-0324462MM1518
PathwayBIOCARTA_STRESS_PATHWAY

JUN NFKB1

2.75e-0324462MM1515
PathwayBIOCARTA_STRESS_PATHWAY

JUN NFKB1

2.75e-0324462M9670
PathwayREACTOME_TRAF6_MEDIATED_NF_KB_ACTIVATION

NFKB1 NFKB2

2.98e-0325462M940
PathwayBIOCARTA_TOLL_PATHWAY

JUN NFKB1

2.98e-0325462M984
Pubmed

A census of human transcription factors: function, expression and evolution.

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 HOXD1 NFKB1 NFKB2 POU3F1 USF1 PBX3 AR IRX4 TLX2

1.66e-11908581519274049
Pubmed

Hox-1.11 and Hox-4.9 homeobox genes.

HOXA7 HOXB1 HOXB3 HOXD1

6.88e-09145841348361
Pubmed

Characterization of mechanisms involved in transrepression of NF-kappa B by activated glucocorticoid receptors.

JUN NFKB1 NFKB2

1.76e-0845837823959
Pubmed

Impact of cytosine methylation on DNA binding specificities of human transcription factors.

HOXA7 HOXB1 JUN NEUROD2 HOXD1 NFKB2 POU3F1 USF1 GFI1 TLX2

2.15e-08544581028473536
Pubmed

Organization of human class I homeobox genes.

HOXA7 HOXB1 HOXB3 HOXD1

4.98e-08225842576652
Pubmed

HIV-Tat protein induces oxidative and inflammatory pathways in brain endothelium.

JUN NFKB1 NFKB2

8.77e-08658312485413
Pubmed

The human immunodeficiency virus type 1 Tat protein up-regulates the promoter activity of the beta-chemokine monocyte chemoattractant protein 1 in the human astrocytoma cell line U-87 MG: role of SP-1, AP-1, and NF-kappaB consensus sites.

JUN NFKB1 NFKB2

1.53e-07758310644332
Pubmed

The branchial Hox code and its implications for gene regulation, patterning of the nervous system and head evolution.

HOXB1 HOXB3 HOXD1

2.45e-0785831688181
Pubmed

In vitro and in vivo binding of human immunodeficiency virus type 1 Tat protein and Sp1 transcription factor.

JUN NFKB1 NFKB2

2.45e-0785837690421
Pubmed

The thyroid transcription factor-1 gene is a candidate target for regulation by Hox proteins.

HOXB1 HOXB3 HOXD1

3.67e-0795837913891
Pubmed

Local alterations of Krox-20 and Hox gene expression in the hindbrain suggest lack of rhombomeres 4 and 5 in homozygote null Hoxa-1 (Hox-1.6) mutant embryos.

HOXB1 HOXB3 HOXD1

3.67e-0795838102800
Pubmed

Complete mutation analysis panel of the 39 human HOX genes.

HOXA7 HOXB1 HOXB3 HOXD1

4.93e-073858411857506
Pubmed

Atlas of Hox gene expression in the developing kidney.

HOXA7 HOXB1 HOXB3 HOXD1

4.93e-073858415042701
Pubmed

Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster.

HOXA7 HOXB1 HOXB3 HOXD1

5.48e-073958433257809
Pubmed

Quantification of Hox and surfactant protein-B transcription during murine lung development.

HOXA7 HOXB1 HOXB3 HOXD1

6.08e-074058419204410
Pubmed

Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates.

HOXA7 HOXB1 HOXB3 HOXD1

6.73e-074158432479258
Pubmed

Reduction of Hox gene expression by histone H1 depletion.

HOXA7 HOXB1 HOXB3 HOXD1

8.18e-074358422701719
Pubmed

Nomenclature for human homeobox genes.

HOXA7 HOXB1 HOXB3 HOXD1

8.99e-07445841973146
Pubmed

Vertebrate homeobox gene nomenclature.

HOXA7 HOXB1 HOXB3 HOXD1

1.18e-06475841358459
Pubmed

Long-range regulation by shared retinoic acid response elements modulates dynamic expression of posterior Hoxb genes in CNS development.

HOXA7 HOXB1 HOXB3

1.24e-061358324525295
Pubmed

An Interaction Landscape of Ubiquitin Signaling.

HSPG2 FLNB USP13 ILF3 ANTXR1 PSMD1 HERC2 EPN2

1.32e-0648158828190767
Pubmed

New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.

HOXA7 HOXB1 HOXB3 HOXD1

1.51e-065058428188179
Pubmed

A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.

HOXA7 HOXB1 HOXB3 HOXD1 AR

1.64e-0611858516971476
Pubmed

A distinct Hox code for the branchial region of the vertebrate head.

HOXB1 HOXB3 HOXD1

1.97e-06155831682814
Pubmed

Differential requirement for p56lck in HIV-tat versus TNF-induced cellular responses: effects on NF-kappa B, activator protein-1, c-Jun N-terminal kinase, and apoptosis.

JUN NFKB1 NFKB2

1.97e-061558310799874
Pubmed

TRIM30 modulates Interleukin-22-regulated papillary thyroid Cancer cell migration and invasion by targeting Sox17 for K48-linked Polyubiquitination.

JUN ILF3 FLG2

2.43e-061658331823782
Pubmed

TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions.

JUN KRT8 ARID1B MOGS NFKB1 NFKB2 LMAN2 HERC2 PBX3 GFI1

2.69e-06922581027609421
Pubmed

Quantitative dissection and modeling of the NF-κB p100-p105 module reveals interdependent precursor proteolysis.

NFKB1 NFKB2

2.73e-06258225482563
Pubmed

Molecular impact of selective NFKB1 and NFKB2 signaling on DLBCL phenotype.

NFKB1 NFKB2

2.73e-06258228368397
Pubmed

Cyclooxygenase-2 gene transcription in a macrophage model of inflammation.

JUN NFKB1

2.73e-06258217114486
Pubmed

Expression of either NF-kappaB p50 or p52 in osteoclast precursors is required for IL-1-induced bone resorption.

NFKB1 NFKB2

2.73e-06258212568403
Pubmed

Transplant-induced reactivation of murine cytomegalovirus immediate early gene expression is associated with recruitment of NF-κB and AP-1 to the major immediate early promoter.

JUN NFKB1

2.73e-06258226795571
Pubmed

Maternal warmth buffers the effects of low early-life socioeconomic status on pro-inflammatory signaling in adulthood.

JUN NFKB1

2.73e-06258220479762
Pubmed

EV71 induces COX-2 expression via c-Src/PDGFR/PI3K/Akt/p42/p44 MAPK/AP-1 and NF-kappaB in rat brain astrocytes.

JUN NFKB1

2.73e-06258220333648
Pubmed

Activator protein 1 is a key terminal mediator of inflammation-induced preterm labor in mice.

JUN NFKB1

2.73e-06258224497579
Pubmed

Repression of NF-kappaB and activation of AP-1 enhance apoptosis in prostate cancer cells.

JUN NFKB1

2.73e-06258219123467
Pubmed

Cultivated ginseng suppresses ultraviolet B-induced collagenase activation via mitogen-activated protein kinases and nuclear factor κB/activator protein-1-dependent signaling in human dermal fibroblasts.

JUN NFKB1

2.73e-06258222749179
Pubmed

NF-kappaB to the rescue: RELs, apoptosis and cellular transformation.

NFKB1 NFKB2

2.73e-06258210354583
Pubmed

Osteoclast precursor interaction with bone matrix induces osteoclast formation directly by an interleukin-1-mediated autocrine mechanism.

NFKB1 NFKB2

2.73e-06258218250170
Pubmed

New insights into the role of nuclear factor-kappaB, a ubiquitous transcription factor in the initiation of diseases.

NFKB1 NFKB2

2.73e-0625829895331
Pubmed

The long non-coding RNA FLJ46906 binds to the transcription factors NF-κB and AP-1 and regulates expression of aging-associated genes.

JUN NFKB1

2.73e-06258230125263
Pubmed

Ectopic nuclear reorganisation driven by a Hoxb1 transgene transposed into Hoxd.

HOXB1 HOXD1

2.73e-06258218252796
Pubmed

c-Jun N-Terminal Phosphorylation: Biomarker for Cellular Stress Rather than Cell Death in the Injured Cochlea.

JUN GFI1

2.73e-06258227257624
Pubmed

How do nuclear factor kappa B (NF-κB)1 and NF-κB2 defects lead to the incidence of clinical and immunological manifestations of inborn errors of immunity?

NFKB1 NFKB2

2.73e-06258236706462
Pubmed

Androgenic induction of prostate-specific antigen gene is repressed by protein-protein interaction between the androgen receptor and AP-1/c-Jun in the human prostate cancer cell line LNCaP.

JUN AR

2.73e-0625829211894
Pubmed

ncRNA-mediated overexpression of ubiquitin-specific proteinase 13 contributes to the progression of prostate cancer via modulating AR signaling, DNA damage repair and immune infiltration.

USP13 AR

2.73e-06258236564767
Pubmed

Downregulation of cellular c-Jun N-terminal protein kinase and NF-κB activation by berberine may result in inhibition of herpes simplex virus replication.

JUN NFKB1

2.73e-06258224913175
Pubmed

Related subunits of NF-kappa B map to two distinct loci associated with translocations in leukemia, NFKB1 and NFKB2.

NFKB1 NFKB2

2.73e-0625821612589
Pubmed

NF-κB-to-AP-1 switch: a mechanism regulating transition from endothelial barrier injury to repair in endotoxemic mice.

JUN NFKB1

2.73e-06258224986487
Pubmed

The role of NF-{kappa}B-1 and NF-{kappa}B-2-mediated resistance to apoptosis in lymphomas.

NFKB1 NFKB2

2.73e-06258216751281
Pubmed

Chlamydia pneumoniae infection and hyperlipidaemia-induced expression of P50 and c-Fos in the heart of C57BL6J mice.

JUN NFKB1

2.73e-06258218468197
Pubmed

Expression of transcription factors NF-kappaB and AP-1 in nasal polyposis.

JUN NFKB1

2.73e-06258218352974
Pubmed

Monitoring a nuclear factor-κB signature of drug resistance in multiple myeloma.

NFKB1 NFKB2

2.73e-06258221846842
Pubmed

Activation of transcription factors NF-kappaB and AP-1 and their relations with apoptosis associated-proteins in hepatocellular carcinoma.

JUN NFKB1

2.73e-06258215991283
Pubmed

Aberrant activation of the androgen receptor by NF-kappaB2/p52 in prostate cancer cells.

NFKB2 AR

2.73e-06258220388792
Pubmed

Astragaloside IV inhibits NF- κ B activation and inflammatory gene expression in LPS-treated mice.

JUN NFKB1

2.73e-06258225960613
Pubmed

c-Jun can mediate androgen receptor-induced transactivation.

JUN AR

2.73e-0625828798722
Pubmed

NF-kappa B binds to the immunoglobulin S gamma 3 region in vivo during class switch recombination.

NFKB1 NFKB2

2.73e-06258217109470
Pubmed

Requirement for NF-kappaB in osteoclast and B-cell development.

NFKB1 NFKB2

2.73e-0625829407039
Pubmed

Negative-strand RNA transcripts are produced in human immunodeficiency virus type 1-infected cells and patients by a novel promoter downregulated by Tat.

NFKB1 USF1

2.73e-0625828289399
Pubmed

AP-1 and NF-κB synergize to transcriptionally activate latent HIV upon T-cell receptor activation.

JUN NFKB1

2.73e-06258233421101
Pubmed

Transcriptional activity of c-Jun is critical for the suppression of AR function.

JUN AR

2.73e-06258223523566
Pubmed

Cell-lineage specificity and role of AP-1 in the prostate fibroblast androgen receptor cistrome.

JUN AR

2.73e-06258227634452
Pubmed

NF-kappaB and AP-1 connection: mechanism of NF-kappaB-dependent regulation of AP-1 activity.

JUN NFKB1

2.73e-06258215314185
Pubmed

[Effects of CpG-ODN combined with HBsAg on the phenotype, function and the activity of NF-kappa B and AP-1 of monocyte-derived dendritic cells in chronic hepatitis B patients].

JUN NFKB1

2.73e-06258218304423
Pubmed

Analysis of NFKB1 and NFKB2 gene expression in the blood of patients with sudden sensorineural hearing loss.

NFKB1 NFKB2

2.73e-06258236773447
Pubmed

Sodium lactate increases LPS-stimulated MMP and cytokine expression in U937 histiocytes by enhancing AP-1 and NF-kappaB transcriptional activities.

JUN NFKB1

2.73e-06258215941782
Pubmed

Cycling hypoxia promotes a pro-inflammatory phenotype in macrophages via JNK/p65 signaling pathway.

JUN NFKB1

2.73e-06258231964911
Pubmed

Isolation and analysis of embryonic expression of Hox-4.9, a member of the murine labial-like gene family.

HOXB1 HOXD1

2.73e-0625821356009
Pubmed

NF-{kappa}B is transported into the nucleus by importin {alpha}3 and importin {alpha}4.

NFKB1 NFKB2

2.73e-06258215677444
Pubmed

Combination of linkage mapping and microarray-expression analysis identifies NF-kappaB signaling defect as a cause of autosomal-recessive mental retardation.

NFKB1 TRAPPC9

2.73e-06258220004764
Pubmed

Osteopetrosis in mice lacking NF-kappaB1 and NF-kappaB2.

NFKB1 NFKB2

2.73e-0625829359707
Pubmed

Screening large numbers of expression patterns of transcription factors in late stages of the mouse thymus.

HOXB1 HOXB3 KRT8 POU3F1 PBX3 IRX4

5.14e-0626358620932939
Pubmed

Schwann cell myelination requires integration of laminin activities.

HSPG2 JUN POU3F1

5.73e-062158322767514
Pubmed

Cdx is crucial for the timing mechanism driving colinear Hox activation and defines a trunk segment in the Hox cluster topology.

HOXA7 HOXB1 HOXD1

7.61e-062358328041967
Pubmed

USF1-ATRAP-PBX3 Axis Promote Breast Cancer Glycolysis and Malignant Phenotype by Activating AKT/mTOR Signaling.

USF1 PBX3

8.19e-06358235414770
Pubmed

Regulation of the G2-M cell cycle progression by the ERK5-NFkappaB signaling pathway.

NFKB1 MAPK7

8.19e-06358217452529
Pubmed

Regulation of stimulus-induced interleukin-8 gene transcription in human adrenocortical carcinoma cells - Role of AP-1 and NF-κB.

JUN NFKB1

8.19e-06358231634687
Pubmed

Dimerization of NF-KB2 with RelA(p65) regulates DNA binding, transcriptional activation, and inhibition by an I kappa B-alpha (MAD-3).

NFKB1 NFKB2

8.19e-0635828441377
Pubmed

Clinorotation upregulates inducible nitric oxide synthase by inhibiting AP-1 activation in human umbilical vein endothelial cells.

JUN NFKB1

8.19e-06358219306295
Pubmed

CDK5 functions as a tumor promoter in human colorectal cancer via modulating the ERK5-AP-1 axis.

JUN MAPK7

8.19e-06358227735944
Pubmed

Nuclear transcription factor-kappaB as a target for cancer drug development.

NFKB1 NFKB2

8.19e-06358212040437
Pubmed

The NF-kappa B and I kappa B proteins: new discoveries and insights.

NFKB1 NFKB2

8.19e-0635828717528
Pubmed

NIBP, a novel NIK and IKK(beta)-binding protein that enhances NF-(kappa)B activation.

NFKB1 TRAPPC9

8.19e-06358215951441
Pubmed

Enteroaggregative Escherichia coli infection induces IL-8 production via activation of mitogen-activated protein kinases and the transcription factors NF-kappaB and AP-1 in INT-407 cells.

JUN NFKB1

8.19e-06358219898747
Pubmed

Inhibition of Egr-1 by siRNA in prostate carcinoma cell lines is associated with decreased expression of AP-1 and NF-κB.

JUN NFKB1

8.19e-06358221743958
Pubmed

The IkappaB kinase complex and NF-kappaB act as master regulators of lipopolysaccharide-induced gene expression and control subordinate activation of AP-1.

JUN NFKB1

8.19e-06358215226448
Pubmed

Motif module map reveals enforcement of aging by continual NF-kappaB activity.

NFKB1 NFKB2

8.19e-06358218055696
Pubmed

Induction of mouse c-src in RAW264 cells is dependent on AP-1 and NF-kappaB and important for progression to multinucleated cell formation.

JUN NFKB1

8.19e-06358215541355
Pubmed

Aberrantly expressed c-Jun and JunB are a hallmark of Hodgkin lymphoma cells, stimulate proliferation and synergize with NF-kappa B.

JUN NFKB1

8.19e-06358212145210
Pubmed

Protective effect of kobophenol A on nitric oxide-induced cell apoptosis in human osteoblast-like MG-63 cells: involvement of JNK, NF-κB and AP-1 pathways.

JUN NFKB1

8.19e-06358221511059
Pubmed

The Effects of NF-κB and c-Jun/AP-1 on the Expression of Prothrombotic and Proinflammatory Molecules Induced by Anti-β2GPI in Mouse.

JUN NFKB1

8.19e-06358226829121
Pubmed

Transcriptional regulation of increased CCL2 expression in pulmonary fibrosis involves nuclear factor-κB and activator protein-1.

JUN NFKB1

8.19e-06358223583295
Pubmed

Differential inhibition of UVB-induced AP-1 and NF-kappaB transactivation by components of the jun bZIP domain.

JUN NFKB1

8.19e-06358215791649
Pubmed

NF-κB: an essential transcription factor in psoriasis.

NFKB1 NFKB2

8.19e-06358223219896
Pubmed

NFkappaB1/p50 is not required for tumor necrosis factor-stimulated growth of primary mammary epithelial cells: implications for NFkappaB2/p52 and RelB.

NFKB1 NFKB2

8.19e-06358217008396
Pubmed

Identification of endogenous glucocorticoid repressed genes differentially regulated by a glucocorticoid receptor mutant able to separate between nuclear factor-kappaB and activator protein-1 repression.

JUN NFKB1

8.19e-06358215550679
Pubmed

Inhibition of activator protein-1, NF-kappaB, and MAPKs and induction of phase 2 detoxifying enzyme activity by chlorogenic acid.

JUN NFKB1

8.19e-06358215944151
Pubmed

Necrotic cells influence migration and invasion of glioblastoma via NF-κB/AP-1-mediated IL-8 regulation.

JUN NFKB1

8.19e-06358227076368
Pubmed

Signaling mediated by the NF-κB sub-units NF-κB1, NF-κB2 and c-Rel differentially regulate Helicobacter felis-induced gastric carcinogenesis in C57BL/6 mice.

NFKB1 NFKB2

8.19e-06358223975431
InteractionERG interactions

PRR12 JUN ARID1B ILF3 NEUROD2 HERC2 AR

2.71e-06223567int:ERG
InteractionMEIS1 interactions

HOXA7 HOXB1 PBX3 TLX2

1.31e-0552564int:MEIS1
InteractionKLF5 interactions

PRR12 JUN ARID1B NFKB1 FLG2 AR

1.65e-05195566int:KLF5
InteractionETS1 interactions

JUN ARID1B NFKB1 MAPK7 AR

2.15e-05121565int:ETS1
InteractionGSK3B interactions

BICD2 JUN DNAJC13 MOGS NFKB1 NFKB2 PSMD1 LMAN2 HERC2 AR GFI1

2.24e-058685611int:GSK3B
InteractionHDAC4 interactions

BICD2 PRR12 ILF3 KRT35 NFKB1 NFKB2 HERC2 GOLGA6L9 AR TRAPPC9

3.38e-057445610int:HDAC4
InteractionUNC5CL interactions

BICD2 KRTAP13-2 NFKB1

3.46e-0523563int:UNC5CL
InteractionHOXD1 interactions

HOXB1 HOXD1

7.54e-055562int:HOXD1
Cytoband15q25.2

GOLGA6L10 GOLGA6L9 MEX3B GOLGA6L4

2.54e-074357415q25.2
Cytoband2p13.1

MOGS ANTXR1 TLX2

1.06e-05345732p13.1
CytobandEnsembl 112 genes in cytogenetic band chr15q25

GOLGA6L10 GOLGA6L9 MEX3B GOLGA6L4

4.86e-05160574chr15q25
Cytoband17q21.3

HOXB1 HOXB3

1.80e-041657217q21.3
CytobandEnsembl 112 genes in cytogenetic band chr2p13

MOGS ANTXR1 TLX2

7.20e-04140573chr2p13
Cytoband10q24

NFKB2 PKD2L1

8.78e-043557210q24
GeneFamilyHOXL subclass homeoboxes

HOXA7 HOXB1 HOXB3 HOXD1

5.69e-0652414518
GeneFamilyAnkyrin repeat domain containing|NF-kappa B complex subunits

NFKB1 NFKB2

5.00e-0554121254
GeneFamilyTALE class homeoboxes and pseudogenes

PBX3 IRX4

1.58e-0326412526
CoexpressionBENPORATH_EED_TARGETS

SOX1 HOXA7 HOXB1 JUN HOXB3 NEUROD2 HOXD1 PRDM13 POU3F1 RBM24 GFI1 IRX4 TLX2

2.67e-0710595613M7617
CoexpressionHOFFMAN_CLOCK_TARGETS_UP

HOXA7 JUN ANTXR1

1.10e-0610563M2063
CoexpressionAIZARANI_LIVER_C39_EPCAM_POS_BILE_DUCT_CELLS_4

FLNB KRT8 NFKB1 NFKB2 OCLN

4.61e-05184565M39135
CoexpressionBENPORATH_SUZ12_TARGETS

SOX1 HOXB1 JUN HOXB3 NEUROD2 HOXD1 POU3F1 GFI1 IRX4 TLX2

6.02e-0510355610M9898
CoexpressionRIZ_ERYTHROID_DIFFERENTIATION_12HR

JUN PBX3 AR

6.27e-0536563M4389
CoexpressionRIZ_ERYTHROID_DIFFERENTIATION_12HR

JUN PBX3 AR

6.27e-0536563MM513
CoexpressionGSE5589_IL6_KO_VS_IL10_KO_LPS_STIM_MACROPHAGE_45MIN_DN

HOXA7 JUN HOXD1 GHITM LMAN2

6.69e-05199565M6654
CoexpressionBENPORATH_PRC2_TARGETS

HOXB1 JUN HOXB3 NEUROD2 HOXD1 POU3F1 IRX4 TLX2

6.81e-05650568M8448
CoexpressionMIKKELSEN_IPS_WITH_HCP_H3K27ME3

HOXB1 HOXB3 PRDM13 GFI1

7.06e-05103564M1967
CoexpressionMIKKELSEN_IPS_WITH_HCP_H3K27ME3

HOXB1 HOXB3 PRDM13 GFI1

7.89e-05106564MM1265
CoexpressionMULLIGHAN_NPM1_SIGNATURE_3_UP

HOXA7 HOXB3 GHITM POU3F1 PIP4K2C PBX3

7.90e-05335566M10277
CoexpressionBENPORATH_ES_WITH_H3K27ME3

HOXA7 HOXB1 JUN HOXB3 NEUROD2 HOXD1 PRDM13 POU3F1 IRX4 TLX2

1.12e-0411155610M10371
CoexpressionDESCARTES_ORGANOGENESIS_NEURAL_PROGENITOR_CELLS

HOXA7 PRDM13 PKD2L1

1.69e-0450563MM3639
ToppCellsevere-MAIT|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

JUN USP13 PRDM13 RBM24 PZP

6.25e-062005851daf43f1bdd49585dce5e957820554d7f3c1bd4a
ToppCellTCGA-Blood_and_Bone_Marrow-Primary_Blood_Derived_Cancer_-_Peripheral_Blood-Leukemia-Acute_Myeloid_Leukemia-6|TCGA-Blood_and_Bone_Marrow / Sample_Type by Project: Shred V9

HOXA7 HOXB3 OCLN PBX3

2.14e-05125584dd59d6ca4d36f9453eb1b1f260fab36c5d641cb2
ToppCellBronchial-10x5prime-Stromal-Myofibroblastic-Muscle_smooth_airway_ASM|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

ANTXR1 DLG3 RBM24 MEX3B

5.49e-051595847cda111bb98f1241989e49d490bdf51a712ea589
ToppCell390C-Myeloid-Macrophage-SPP1+_Macrophage_2|Macrophage / Donor, Lineage, Cell class and subclass (all cells)

FLNB USP13 ANTXR1 AR

5.63e-051605848aaf6ac4f33ea291387fdbf9ff1a91d559391774
ToppCell3'_v3-GI_small-bowel-Lymphocytic_Invariant-Inducer-like-ILC3|GI_small-bowel / Manually curated celltypes from each tissue

HOXA7 FLNB RBM24 IRX4

6.49e-05166584773673a5d0430640439845b264740bfbbdad0cb2
ToppCellEntopeduncular-Macroglia-OLIGODENDROCYTE-O1-Trf-Oligodendrocyte.Trf.Serpinb1a_(Serpinb1a)|Entopeduncular / BrainAtlas - Mouse McCarroll V32

HOXD1 PRDM13 PZP

6.60e-056058348adafeec1810bce5f118fa63d4a8ee7ab9ca0f7
ToppCellEntopeduncular-Macroglia-OLIGODENDROCYTE-O1-Trf-Oligodendrocyte.Trf.Serpinb1a_(Serpinb1a)-|Entopeduncular / BrainAtlas - Mouse McCarroll V32

HOXD1 PRDM13 PZP

6.60e-0560583a83afb89dbfc2e1cdfce57320d89c980bd8fb820
ToppCell3'_v3-Lung-Lymphocytic_Invariant-Inducer-like-ILC3|Lung / Manually curated celltypes from each tissue

HOXA7 NFKB1 RBM24 MEX3B

6.64e-051675840614d077b47a87f726068615548d0b0a216627be
ToppCellmild-Others-CD34+_GATA2+_cells|mild / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

HOXA7 HSPG2 KRT8 MEX3B

7.45e-05172584379f6f271e653d5e404851e51a189bd582bb0f43
ToppCelldroplet-Thymus-nan-21m-Lymphocytic-B_cell|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HOXA7 JUN MEX3B EPN2

7.62e-051735840a0cd40bb5f61431fe34758626c8a63ec610a8a5
ToppCellCOVID-19_Severe-MAIT|COVID-19_Severe / Disease condition and Cell class

JUN PRDM13 RBM24 PZP

8.32e-051775848eb69041f482b58325e3539f607923f7b1fa5977
ToppCellsevere-Others-CD34+_GATA2+_cells|severe / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

HOXA7 HSPG2 KRT8 MEX3B

8.69e-05179584dd789a1b7327d6f9ed5272f3eb54bd43f7ae8d78
ToppCellcritical-Myeloid-Mast_cell|Myeloid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

HSPG2 HOXB3 JPH4 GFI1

9.07e-05181584f0d81ae74d3f32979624a94b2ef93774831a7970
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD8+_T-MAIT-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

JUN PRDM13 RBM24 PZP

9.27e-05182584f30e5a21b49f30b82e2b6f1fd2daefd805a40083
ToppCellCOVID-19_Severe-Lymphoid_T/NK-MAIT|COVID-19_Severe / Disease group, lineage and cell class

JUN PRDM13 RBM24 PZP

9.27e-0518258419045db5c726c06ec6e4feb4311633c8164ddb3c
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD8+_T-MAIT|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

JUN PRDM13 RBM24 PZP

9.27e-051825841444cdc4522a70a40d697ccadf54cf26d327ade0
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD8+_T-MAIT-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

JUN PRDM13 RBM24 PZP

9.27e-05182584cccac9f85825f4e310b86e37ee6320769a670501
ToppCellPBMC-Severe-Lymphocyte-T/NK-CD8+_T-MAIT|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

JUN PRDM13 RBM24 PZP

9.27e-0518258449eced222e8f90c2b59bcc7d56b62c3e703fcce5
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-CAP2-CAP2_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

PSMD1 PBX3 AR EPN2

9.47e-051835843ef9ac1ae13b6172f9121ab1c129ecaa0fef460f
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neurons_B-Branch_B1_(eMN)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CELSR3 HOXD1 RBM24 TLX2

1.07e-041895843f5522be3e24dcdb6272f18cee2f239dfdeff9ad
ToppCellSevere-B_activate-7|Severe / disease group and sub_cluster of B and Plasma cells(res = 0.5)

JUN PILRB NFKB1 NFKB2

1.09e-0419058467e6c8a5a8724bdf2861fd76a711319dfc71d47a
ToppCell15-Trachea-Epithelial-Neuroendocrine|Trachea / Age, Tissue, Lineage and Cell class

SOX1 JPH4 CELSR3 PKD2L1

1.12e-0419158476311fa5f3ae9bb27cf04387a8c92300f2888c28
ToppCell15|World / Age, Tissue, Lineage and Cell class

FLNB JUN OCLN USF1

1.16e-04193584a8ad0de955494d6f5929dc44ba46627d06d95453
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neurons_B|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CELSR3 HOXD1 RBM24 TLX2

1.19e-041945845bd0f739aa75f387cca7c3b2686493ee2d1ee968
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-G|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

HOXA7 HOXB3 PIP4K2C MEX3B

1.19e-041945844e93bd903cddfd0c8f220b6a35b449895de4119b
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-MAIT|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

JUN PILRB PRDM13 RBM24

1.21e-0419558459164d115a0928cc9b79c7661c7190ad695f9d80
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-MAIT|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

JUN PILRB PRDM13 RBM24

1.21e-04195584c7b54b210cc2c8ddaefebfba74381adb2ca698b8
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-MAIT-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

JUN PILRB PRDM13 RBM24

1.21e-04195584e173a713d273b135db4f71bdcaada3b0e55d74f1
ToppCell3'_v3-blood-Lymphocytic_NK-NK_CD56bright_CD16-|blood / Manually curated celltypes from each tissue

FLNB PILRB NFKB1 NFKB2

1.21e-041955841470f562ebcfe7da367964ecfd6c7f43bcdb4a73
ToppCell3'-GW_trimst-1-SmallIntestine-Neuronal-neurons_B-Branch_B1_(eMN)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HOXB3 CELSR3 HOXD1 TLX2

1.21e-04195584b25c534fc6320d4da6437ef1b27e32a5d5256f3e
ToppCellPBMC-Control-Lymphocyte-T/NK-CD8+_T-MAIT-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

JUN PILRB PRDM13 RBM24

1.21e-04195584a8fd42ff6c2bd80d0e3f20fe3bbf7d113b399df1
ToppCellAT2_cells-Donor_04|World / lung cells shred on cell class, cell subclass, sample id

JUN USP13 KRT8 OCLN

1.28e-041985848a1f984e46f4fa5be33027b9dbaa2ca060a2245d
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Neuronal|6_mon / Sample Type, Dataset, Time_group, and Cell type.

NEUROD2 POU3F1 RBM24 MEX3B

1.28e-04198584076c862f2a723f0361749377561cae902068b1a0
ToppCell3'-Adult-Distal_Rectal|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

FLNB KRT8 ARID1B KRTAP13-2

1.28e-041985847ad7726fc405806b1d7824f58548073ea5e0c70b
ToppCell3'-Adult-Distal_Rectal-Epithelial-epithelial_progenitor_cell-TA|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

FLNB KRT8 ARID1B KRTAP13-2

1.28e-041985841fbec311f2c987ca90a023a5989128c05aa12d5c
ToppCellBAL-Severe-Epithelial-Epithelial-AT1/AT2|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HSPG2 KRT8 HOXD1 OCLN

1.28e-04198584aed0476248e9637897eefb1623ec4035f2dacd82
ToppCellBAL-Severe-Epithelial-Epithelial-AT1/AT2-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HSPG2 KRT8 HOXD1 OCLN

1.28e-04198584691a2f1779225e5519155460eeb6a2aac5f67a92
ToppCellBAL-Severe-Epithelial-Epithelial-AT1/AT2|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

HSPG2 KRT8 HOXD1 OCLN

1.28e-04198584e115eea04012e9e492e923ed080e1723c38d14fd
ToppCellBAL-Severe-Epithelial-Epithelial-AT1/AT2-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

HSPG2 KRT8 HOXD1 OCLN

1.28e-0419858433d1e0b6f57663544bee0ffdde83a65da764d44c
ToppCellBronchial-NucSeq-Epithelial-Epi_airway_neuro-secretory-Ionocyte_n_Brush|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

KRT8 PKD2L1 AR SPSB2

1.28e-04198584dd0465b45b02cb8edf0914d19afb52fcaaeb012c
ToppCell3'-Adult-Distal_Rectal-Epithelial|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

FLNB KRT8 ARID1B KRTAP13-2

1.28e-04198584ceede961ad9af6a3159db7efaa5087bf38aafc2d
ToppCellSevere_COVID-19-Epithelial-AT1/AT2|Severe_COVID-19 / Disease group,lineage and cell class (2021.01.30)

HSPG2 KRT8 HOXD1 OCLN

1.28e-0419858443e33d28d9de5033bd00d39be953542a225236ed
ToppCell3'-Adult-Distal_Rectal-Epithelial-epithelial_progenitor_cell|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

FLNB KRT8 ARID1B KRTAP13-2

1.28e-041985844f26a60e99f42343e5af7221723e108a1a1b7827
ToppCellCOVID-19-COVID-19_Mild-Others-HSPC|COVID-19_Mild / Disease, condition lineage and cell class

HOXA7 HSPG2 KRT8 MEX3B

1.31e-041995840230103c37ae3aff58240739b89f2c36b1e39a69
ToppCell3'-Broncho-tracheal-Epithelial-Airway_epithelium-respiratory_basal_cell-Suprabasal-Suprabasal_L.0.0.2.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

JUN KRT8 POU3F1 IRX4

1.31e-04199584c88a28a73f54dc571f2ff1e4b55073f83cbead2c
ToppCellCOVID-19-COVID-19_Severe-Others-HSPC|COVID-19_Severe / Disease, condition lineage and cell class

HOXA7 HSPG2 KRT8 MEX3B

1.31e-0419958425de67b6c9c8d6bb9a538e071a40ef865906c95d
ToppCellsevere-MAIT|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

JUN PRDM13 RBM24 PZP

1.33e-042005848a849d0ef244aa2666da2d31bd0731fb04e40911
ComputationalGenes in the cancer module 123.

HOXB1 JUN ILF3 NFKB1 NFKB2 POU3F1 AR

3.03e-05247407MODULE_123
ComputationalGenes in the cancer module 197.

HOXA7 JUN ILF3 NFKB1 GFI1

4.36e-04174405MODULE_197
Drug2,2',4,6,6'-pentachlorobiphenyl

JUN NFKB1 OCLN AR

1.54e-0720564ctd:C417207
Drugphenanthridinone; Up 200; 51.2uM; MCF7; HT_HG-U133A_EA

BICD2 FLNB CELSR3 SUPT6H DLG3 IRX4

7.83e-061935661115_UP
DrugKetanserin tartrate hydrate [83846-83-7]; Up 200; 7uM; HL60; HG-U133A

FLNB JUN SUPT6H NFKB2 PKD2L1 TRAPPC9

9.07e-061985661593_UP
DrugPCB 104

JUN NFKB1 NFKB2

9.35e-0617563CID000091662
Drugequol

JUN NFKB1 NFKB2 AR

1.54e-0561564CID000091469
Drugwogonin

JUN KRT8 NFKB1 NFKB2

1.75e-0563564CID005281703
DrugCosopt

JUN NFKB1 NFKB2 POU3F1 HERC2 MAPK7 USF1

1.96e-05341567CID000003154
DrugAC1L1A4O

JUN KRT8 NFKB1 NFKB2

1.99e-0565564CID000025967
DrugAC1LA1RA

JUN NFKB1 NFKB2

2.10e-0522563CID000479966
DrugAR E

JUN ILF3 NFKB1 NFKB2 USF1 AR

2.12e-05230566CID004369394
DrugNSC-695672

NFKB1 NFKB2 AR TLX2

2.24e-0567564CID000393593
Drugpyrithione

KRT8 NFKB1 NFKB2

2.75e-0524563CID000001569
Drugpanepoxydone

JUN NFKB1 NFKB2

3.12e-0525563CID000161704
DrugVelcade (bortezomib

JUN KRT8 KRT35 NFKB1 NFKB2 PSMD1 MAPK7

3.54e-05374567CID000093860
Drugtolrestat

KRT8 NFKB1 NFKB2 AR

4.09e-0578564CID000053359
DrugAC1MHEOC

JUN NFKB1 NFKB2

4.42e-0528563CID003003140
DrugAC1O3R20

JUN NFKB1 NFKB2

4.42e-0528563CID006335051
Drug1pzj

JUN MOGS NFKB1 NFKB2 MAPK7

5.64e-05167565CID000447976
Drugpyrrolidinium

MOGS NAPRT NFKB1 NFKB2

5.73e-0585564CID000031268
DrugNSC294601

NFKB1 NFKB2

5.91e-055562CID000325606
DrugAC1MVXUL

NFKB1 NFKB2

5.91e-055562CID003715266
Drugcephadroxil

HOXA7 HOXB1 HOXB3 AR

6.00e-0586564CID000002610
DrugBMS-345541

JUN NFKB1 NFKB2

6.65e-0532563CID009813758
DrugBiM4

JUN ILF3 CELSR3 NFKB1 NFKB2 MAPK7

6.74e-05283566CID000002399
Drug2,6-dihydroxybenzoic acid

HOXB1 JUN NFKB1 NFKB2 AR

7.05e-05175565CID000009338
Drugpanduratin A

JUN NFKB1 NFKB2

7.30e-0533563CID006483648
Druggenistein

HSPG2 JUN KRT8 ILF3 PILRB NFKB1 NFKB2 LMAN2 MAPK7 PZP AR

7.35e-0511175611CID005280961
Drugtrinitrobenzene

JUN KRT8 NFKB1 NFKB2

7.81e-0592564CID000007434
Drugpyrrole-2-carboxamide

JUN AR

8.86e-056562CID000573553
Drugapocynin

JUN NFKB1 NFKB2 MAPK7 TLX2

9.40e-05186565CID000002214
DrugAC1O3GBZ

MOGS NFKB1 NFKB2

9.50e-0536563CID006327751
Drugcelastrol; Down 200; 2.5uM; MCF7; HT_HG-U133A_EA

BICD2 CELSR3 DLG3 TRAPPC9 EPN2

9.64e-05187565887_DN
DrugsIL-4R

JUN NFKB1 NFKB2

1.03e-0437563CID000059757
DrugICI182,780; Up 200; 1uM; PC3; HT_HG-U133A

BICD2 HSPG2 JUN ILF3 MAPK7

1.17e-041955656918_UP
DrugChlorzoxazone [95-25-0]; Up 200; 23.6uM; HL60; HG-U133A

HOXB1 NFKB2 PKD2L1 DLG3 TRAPPC9

1.20e-041965651416_UP
DrugPhenindione [83-12-5]; Down 200; 18uM; MCF7; HT_HG-U133A

JUN CELSR3 SUPT6H ANTXR1 TRAPPC9

1.23e-041975652868_DN
DrugCortodoxone

NFKB1 AR

1.24e-047562ctd:D003350
DrugAC1L1GSB

JUN NFKB1 NFKB2

1.31e-0440563CID000003819
DrugE-guggulsterone

JUN NFKB1 NFKB2 AR

1.45e-04108564CID006439929
DrugSKF 38393

JUN CELSR3 NFKB1 NFKB2

1.56e-04110564CID000001242
DrugA 285

NFKB1 NFKB2 POU3F1

1.62e-0443563CID000002340
DrugAG 1879

HOXA7 JUN NFKB1 MAPK7

1.73e-04113564ctd:C412373
Drug1'-acetoxychavicol acetate

JUN NFKB1 NFKB2

1.74e-0444563CID000119104
DrugDimethyl Sulfoxide

JUN KRT8 NFKB2 OCLN PZP AR

1.75e-04337566ctd:D004121
DrugAC1L1KON

JUN ILF3 NFKB1 NFKB2

1.85e-04115564CID000005589
DrugAcetaldehyde

HOXB1 JUN NFKB1 NFKB2 OCLN

2.10e-04221565ctd:D000079
Drugbiphenylcarboxylic acid

JUN NFKB1

2.12e-049562CID000070357
Drugheme arginate

JUN NFKB2

2.12e-049562ctd:C048849
Drug2-oxothiazolidine-4-carboxylate

JUN NFKB1 NFKB2

2.12e-0447563CID000065272
DrugMalathion

JUN NFKB2 OCLN AR

2.25e-04121564ctd:D008294
DrugNSC364150

JUN NFKB1 NFKB2

2.25e-0448563CID000100771
Diseaseopportunistic bacterial infectious disease (implicated_via_orthology)

NFKB1 NFKB2

1.17e-049542DOID:0050340 (implicated_via_orthology)
DiseaseImmunoglobulin Deficiency, Late-Onset

NFKB1 NFKB2

1.79e-0411542C2936665
DiseaseAcquired Hypogammaglobulinemia

NFKB1 NFKB2

1.79e-0411542C2936664
DiseaseCommon variable immunodeficiency

NFKB1 NFKB2

2.53e-0413542cv:C0009447
Diseaselysophosphatidylcholine 16:1 measurement

PKD2L1 MEX3B

2.95e-0414542EFO_0010358
DiseaseCommon Variable Immunodeficiency

NFKB1 NFKB2

3.40e-0415542C0009447
Diseaseinterleukin 18 measurement

PRR12 NAPRT OCLN

3.71e-0476543EFO_0004581
DiseaseBreast Carcinoma

JUN KRT8 ARID1B HERC2 OCLN AR

4.40e-04538546C0678222
Diseaseosteochondrodysplasia (is_implicated_in)

HSPG2 FLNB

5.51e-0419542DOID:2256 (is_implicated_in)
DiseaseHirschsprung Disease

ARID1B CELSR3

1.48e-0331542C0019569

Protein segments in the cluster

PeptideGeneStartEntry
PTVDASYYGGRGVGG

ANTXR1

376

Q9H6X2
YYREGQGGAGRTSPG

BICD2

556

Q8TD16
YYGSAAPASGGPGGR

ARID1B

316

Q8NFD5
YGGSSAGYGVLSSPR

ARID1B

441

Q8NFD5
SPAAAGYVTAGGYGY

RBM24

181

Q9BX46
VSAGAVGQGYYGAGL

PZP

691

P20742
EGSGGNDAPGQYGAY

HSPG2

4191

P98160
SAAALGVYGGPYGGS

IRX4

66

P78413
RGYGTSLLGGSVGYP

OCLN

91

Q16625
SLLGGSVGYPYGGSG

OCLN

96

Q16625
AYGGLTSPGLSYSLG

KRT8

426

P05787
SGTPKGSGAGYGVGF

MAPK7

731

Q13164
GGYSDGLGGNSLYSP

PBX3

386

P40426
YGHTGYGPSGGSRKS

FLG2

2356

Q5D862
RLPTGYYFGASAGTG

LMAN2

246

Q12907
SAGAGATAGPGLGLY

GFI1

186

Q99684
ATAGPGLGLYGDFGS

GFI1

191

Q99684
AGGAAVGLGALCYYG

GHITM

86

Q9H3K2
AGGADYGFLGSGPAY

HOXD1

101

Q9GZZ0
LYATGYGAGGRLGIG

HERC2

4006

O95714
LSSGGGAPSYGAAGL

JUN

181

P05412
YGKAGGSPASYHGSP

EPN2

186

O95208
GYGVCTGPGAQGEYS

JPH4

26

Q96JJ6
SGSVSAYGPGLVYGV

FLNB

1821

O75369
LGLYAQAAYPGGGGG

POU3F1

156

Q03052
GGYHSPGDSATGIYG

GOLGA6L3

61

A6NEY3
GGYHSPGDSATGIYG

GOLGA6L4

61

A6NEF3
GGYHSPGDSATGIYG

GOLGA6L9

61

A6NEM1
GGYHSPGDSATGIYG

GOLGA6L10

61

A6NI86
GGYHSPGDSATGVYG

GOLGA6L19

61

H0YKK7
CLPAGGFATSYSGGG

KRT35

71

Q92764
GGGEAGAVAPYGYTR

AR

471

P10275
SGLLGGIGYFYGQGL

MOGS

396

Q13724
SYASEGRYGGGLSSP

HOXB1

41

P14653
YGSGGASYNPGSHGG

ILF3

821

Q12906
ASYNPGSHGGYGGGS

ILF3

826

Q12906
GGYSSYPGSNGFGFD

HOXB3

16

P14651
GASAGYGGYSSQTLP

DLG3

46

Q92796
SQTAGYLTGPGVAGY

DNAJC13

2201

O75165
GYGSCGFPSLGYGSG

KRTAP13-2

131

Q52LG2
GPSAAPEYAAGYGGG

FIGNL2

151

A6NMB9
AVPAASYGRIYAGGG

CELSR3

3041

Q9NYQ7
GGSSAGVGSLAFYPG

PRDM13

276

Q9H4Q3
GAGAGAFASTVPGLY

HOXA7

41

P31268
LVGSYGTSPEGIGGY

PIP4K2C

321

Q8TBX8
RSDPGGGGLAYAAYA

MEX3B

461

Q6ZN04
TSPGSAYQEGGGLYA

PSMD1

431

Q99460
APPGAGSYAAGAGGY

PRR12

601

Q9ULL5
SGYGGLPYGAAAAAA

SOX1

271

O00570
YGGSGGGSSAYHVFP

SUPT6H

1591

Q7KZ85
GGYSSQPGGYPATGA

YIF1A

31

O95070
GTLGYAIGGTYLGPA

SPSB2

176

Q99619
PDGGLTASTYSYLGG

NAPRT

176

Q6XQN6
PGGSTGSGPSYLYGV

PILRB

21

Q9UKJ0
SGGGYYLDLPGSRQG

PKD2L1

266

Q9P0L9
YHYPGGTGGKSGARR

TRAPPC9

256

Q96Q05
PGYGGAASAGASVFG

USP13

706

Q92995
SGGYHGASGYGPAGS

TLX2

51

O43763
YTYFPSTAVGDGAGG

USF1

116

P22415
TAPAYSFGIAGAGSG

JMJD8

161

Q96S16
TLYAAAGGGGASPDY

NEUROD2

276

Q15784
GTGSTGPGYSFPHYG

NFKB1

396

P19838
GGGGSLGFFPSSLAY

NFKB2

371

Q00653