Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyBiologicalProcessco-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway

CSTF3 CPSF7

2.88e-059192GO:0180010
GeneOntologyBiologicalProcessco-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway

CSTF3 CPSF7

3.60e-0510192GO:0180012
GeneOntologyBiologicalProcessmRNA processing

RBM42 CSTF3 CDK13 SCAF4 CPSF7

1.14e-04551195GO:0006397
GeneOntologyBiologicalProcesshair follicle development

HPSE CELSR1 GNAS

1.87e-04123193GO:0001942
GeneOntologyBiologicalProcessmolting cycle process

HPSE CELSR1 GNAS

2.01e-04126193GO:0022404
GeneOntologyBiologicalProcesshair cycle process

HPSE CELSR1 GNAS

2.01e-04126193GO:0022405
GeneOntologyBiologicalProcessmolting cycle

HPSE CELSR1 GNAS

3.35e-04150193GO:0042303
GeneOntologyBiologicalProcesshair cycle

HPSE CELSR1 GNAS

3.35e-04150193GO:0042633
GeneOntologyBiologicalProcessskin epidermis development

HPSE CELSR1 GNAS

4.51e-04166193GO:0098773
GeneOntologyBiologicalProcessmRNA 3'-end processing

CSTF3 CPSF7

8.12e-0446192GO:0031124
GeneOntologyCellularComponentmRNA cleavage factor complex

CSTF3 CPSF7

3.58e-0431192GO:0005849
GeneOntologyCellularComponentfibrillar center

NFIC TAF1C ARHGAP33

3.62e-04156193GO:0001650
Domain-

HPSE GLB1L2

5.72e-04351923.20.20.80
DomainGlyco_hydro_catalytic_dom

HPSE GLB1L2

6.74e-0438192IPR013781
DomainRRM_1

RBM42 SCAF4 CPSF7

1.16e-03208193PF00076
DomainRRM

RBM42 SCAF4 CPSF7

1.31e-03217193SM00360
DomainGlycoside_hydrolase_SF

HPSE GLB1L2

1.31e-0353192IPR017853
DomainRRM_dom

RBM42 SCAF4 CPSF7

1.49e-03227193IPR000504
DomainRRM

RBM42 SCAF4 CPSF7

1.54e-03230193PS50102
Domain-

RBM42 SCAF4 CPSF7

1.83e-032441933.30.70.330
DomainNucleotide-bd_a/b_plait

RBM42 SCAF4 CPSF7

2.14e-03258193IPR012677
PathwayREACTOME_PROCESSING_OF_INTRONLESS_PRE_MRNAS

CSTF3 CPSF7

2.57e-0420172MM15469
PathwayREACTOME_PROCESSING_OF_INTRONLESS_PRE_MRNAS

CSTF3 CPSF7

2.57e-0420172M497
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA

RBM42 CSTF3 PRCC CPSF7

2.84e-04277174MM15414
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA

RBM42 CSTF3 PRCC CPSF7

3.08e-04283174M13087
PathwayREACTOME_HS_GAG_DEGRADATION

HPSE GLB1L2

3.41e-0423172MM14804
PathwayREACTOME_HS_GAG_DEGRADATION

HPSE GLB1L2

3.72e-0424172M636
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRONLESS_PRE_MRNA

CSTF3 CPSF7

5.45e-0429172M783
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRONLESS_PRE_MRNA

CSTF3 CPSF7

5.45e-0429172MM15444
PathwayWP_MRNA_PROCESSING

RBM42 CSTF3 ZNF385A CPSF7

1.77e-03451174MM15946
PathwayREACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM

HPSE GLB1L2

1.89e-0354172MM14633
PathwayREACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM

HPSE GLB1L2

2.10e-0357172M692
PathwayREACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION

CSTF3 CPSF7

2.48e-0362172MM15426
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

RBM42 NAPSA CDK13 NFIC TAF1C SCAF4 CPSF7

3.30e-06129419730804502
Pubmed

A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.

CSTF3 PRCC NFIC SCAF4 CPSF7

4.48e-0647219538943005
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

RBM42 CSTF3 CDK13 CELSR1 TAF1C ZNF385A SCAF4

8.62e-06149719731527615
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

CSTF3 CDK13 ZNF385A SCAF4 CPSF7

5.89e-0580719522681889
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

RBM42 CDK13 TAF1C GNAS SCAF4 CPSF7

6.47e-05137119636244648
Pubmed

DNA Repair Network Analysis Reveals Shieldin as a Key Regulator of NHEJ and PARP Inhibitor Sensitivity.

CSTF3 PRCC NFIC CPSF7

9.43e-0545319429656893
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

PRCC CDK13 SCAF4 CPSF7

1.44e-0450619430890647
Pubmed

Host cell interactome of HIV-1 Rev includes RNA helicases involved in multiple facets of virus production.

RBM42 CSTF3 CPSF7

1.85e-0420619322174317
Pubmed

FBXO32 links ubiquitination to epigenetic reprograming of melanoma cells.

CSTF3 GNAS CPSF7

2.01e-0421219333462405
Pubmed

Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.

CSTF3 SCAF4 CPSF7

2.24e-0422019324550385
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

RBM42 CSTF3 ARHGAP33 SCAF4 CPSF7

2.33e-04108219538697112
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

CSTF3 PRCC GNAS CPSF7

2.46e-0458219420467437
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

CSTF3 CDK13 NFIC SCAF4 CPSF7

2.55e-04110319534189442
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

RBM42 SCAF4 CPSF7

3.30e-0425119331076518
Pubmed

A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis.

CSTF3 ZNF385A CPSF7

3.42e-0425419328431233
Pubmed

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.

CSTF3 PRCC SCAF4 CPSF7

3.81e-0465319433742100
Pubmed

Comprehensive interactome of Otx2 in the adult mouse neural retina.

CDK13 ZNF385A

3.83e-045319226426291
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

RBM42 CSTF3 SCAF4 CPSF7

5.31e-0471319429802200
InteractionSNRNP40 interactions

RBM42 CSTF3 PRCC NFIC SCAF4 CPSF7

1.86e-05637196int:SNRNP40
InteractionMIR19A interactions

CSTF3 ZNF385A CPSF7

1.08e-04100193int:MIR19A
InteractionMIR19B1 interactions

CSTF3 ZNF385A CPSF7

1.22e-04104193int:MIR19B1
InteractionWBP4 interactions

RBM42 SCAF4 CPSF7

1.40e-04109193int:WBP4
InteractionSP7 interactions

PRCC NFIC SCAF4 CPSF7

1.65e-04304194int:SP7
InteractionTKTL2 interactions

PRCC NFIC

1.92e-0422192int:TKTL2
Cytoband19q13.12

RBM42 ARHGAP33

4.08e-047219219q13.12
CytobandEnsembl 112 genes in cytogenetic band chr19q13

RBM42 NAPSA ARHGAP33

1.24e-021192193chr19q13
GeneFamilyRNA binding motif containing

RBM42 SCAF4 CPSF7

1.82e-04213103725
CoexpressionGSE40273_EOS_KO_VS_WT_TREG_DN

HPSE CDK13 CELSR1 SCAF4

1.17e-05200194M9130
CoexpressionGSE6269_HEALTHY_VS_FLU_INF_PBMC_DN

HPSE NFIC GNAS

2.13e-04163193M5640
CoexpressionGSE41867_LCMV_ARMSTRONG_VS_CLONE13_DAY15_EFFECTOR_CD8_TCELL_DN

NAPSA HPSE TAF1C

3.13e-04186193M9510
CoexpressionGSE18791_CTRL_VS_NEWCASTLE_VIRUS_DC_16H_DN

MMP11 HPSE SLC9B1

3.60e-04195193M4279
CoexpressionGSE17721_POLYIC_VS_CPG_24H_BMDC_UP

MMP11 RBM42 GFRA3

3.76e-04198193M3953
CoexpressionGSE33374_CD8_ALPHAALPHA_VS_ALPHABETA_CD161_HIGH_TCELL_UP

CELSR1 GFRA3 ZNF385A

3.82e-04199193M8538
CoexpressionGSE20715_WT_VS_TLR4_KO_LUNG_DN

CSTF3 CELSR1 ZNF385A

3.82e-04199193M4350
CoexpressionGSE41867_NAIVE_VS_DAY6_LCMV_ARMSTRONG_EFFECTOR_CD8_TCELL_UP

HPSE CDK13 SCAF4

3.88e-04200193M9495
CoexpressionGSE19772_HCMV_INFL_VS_HCMV_INF_MONOCYTES_AND_PI3K_INHIBITION_UP

MMP11 CELSR1 ZNF385A

3.88e-04200193M7283
CoexpressionGSE27786_CD4_TCELL_VS_NEUTROPHIL_UP

CSTF3 TAF1C GNAS

3.88e-04200193M4830
CoexpressionGSE27786_CD4_TCELL_VS_ERYTHTROBLAST_UP

CDK13 CELSR1 TAF1C

3.88e-04200193M4827
CoexpressionGSE27786_CD8_TCELL_VS_ERYTHROBLAST_UP

CDK13 CELSR1 TAF1C

3.88e-04200193M4841
CoexpressionGSE9006_TYPE_1_VS_TYPE_2_DIABETES_PBMC_AT_DX_UP

RBM42 PRCC TAF1C

3.88e-04200193M5797
CoexpressionGSE42021_CD24HI_TREG_VS_CD24HI_TCONV_THYMUS_UP

RBM42 NFIC GNAS

3.88e-04200193M9615
ToppCellP15-Epithelial-epithelial_progenitor_cell|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

NAPSA CELSR1 GFRA3

3.52e-0515219300d5503d462cfa009fb4cac79ecee11725a18b9a
ToppCelldroplet-Liver-Hepatocytes-24m-Myeloid-macrophage/monocyte|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE PRCC

3.88e-05157193d8e283414a770f05d71f0455d0822e9a9660b115
ToppCelldroplet-Liver-Hepatocytes-24m-Myeloid-myeloid_leukocyte|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE PRCC

3.88e-05157193165e98bf944572cafbc06ef43c9eab7bd6bea1c2
ToppCellfacs-Limb_Muscle-Muscle_forelimb_and_hindlimb-18m-Mesenchymal-mesenchymal_stem_cell|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MMP11 NAPSA ZNF385A

6.42e-05186193a7ab70b049742dfe7ee30557031bfac6412edf52
ToppCellfacs-Mammary_Gland-Mammary_Gland-21m|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDK13 NFIC CELSR1

6.42e-05186193bd1185592aedebccd1007dbf2dd2f549fcdf9f42
ToppCellfacs-Mammary_Gland-Mammary_Gland-21m-Epithelial|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CDK13 NFIC CELSR1

6.73e-05189193965e0e388251e7318f8b463816dc96ccb4658677
ToppCelltumor_Lymph_Node_/_Brain-Epithelial_cells-Malignant_cells|tumor_Lymph_Node_/_Brain / Location, Cell class and cell subclass

NAPSA NFIC GNAS

7.84e-05199193ccbe21c48f5cfa95641fada4ff20d5c095714d14
ToppCellTracheal-NucSeq-Immune_Myeloid-Dendritic_cell-DC_activated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

NAPSA SLC9B1 ARHGAP33

7.84e-051991936dc446a5d183b01bdf227e45bd88d0b3d8b1c56a
ToppCelltumor_Lymph_Node_/_Brain-Epithelial_cells|tumor_Lymph_Node_/_Brain / Location, Cell class and cell subclass

NAPSA NFIC GNAS

7.84e-05199193a212e169cc75b33a560a44eaaaa7c28b86c00246
ToppCellThalamus-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Slc17a6-Rora-Excitatory_Neuron.Slc17a6.Rora.Lypd6_(Parafasicular_nucleus_(PF))|Thalamus / BrainAtlas - Mouse McCarroll V32

RBM42 PROP1

2.48e-04551927c8da8ca1776bb0abbfcf5c933b8817d64a0d3d7
ToppCellEntopeduncular-Macroglia-POLYDENDROCYTE-P1-P1_1-Tnr-Polydendrocyte.Tnr.Ctps_(Ctps)|Entopeduncular / BrainAtlas - Mouse McCarroll V32

RBM42 CELSR1

4.98e-04781922b0973122052bb26153f066e7b87c26f8a319698
ToppCellEntopeduncular-Macroglia-POLYDENDROCYTE-P1-P1_1-Tnr|Entopeduncular / BrainAtlas - Mouse McCarroll V32

RBM42 CELSR1

4.98e-04781921ddbb2247450a8b1c159f524dee15bf688748955
ToppCellTCGA-Uvea-Primary_Tumor-Uveal_Melanoma-Epithelioid_Cell-3|TCGA-Uvea / Sample_Type by Project: Shred V9

GFRA3 PROP1

8.16e-041001929686acb2fa66046f47460261bf5d811ce278d5af
ToppCellfacs-Large_Intestine-Distal-24m-Epithelial-Lgr5-_amplifying_undifferentiated_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA ZNF385A

9.51e-04108192fcc26843a8788f0fe3cec14dcae083830da80b8f
ToppCellfacs-Large_Intestine-Distal-24m-Epithelial-epithelial_cell_of_large_intestine|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA ZNF385A

9.51e-04108192c1c68e328fdf5216f23845b4de9a3b1bbe61b11c
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Hpse_Sema3c|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

HPSE PROP1

1.21e-03122192eae9d94f8510ac0f434942451d55c7260977b178
ToppCellLPS-antiTNF-Unknown|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MMP11 ARHGAP33

1.35e-03129192739b263296c28554967362060b154f7a95e1341d
ToppCellControl-Stromal_mesenchymal-Matrix_Fibroblast-Proliferative_MatrixFB|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

GFRA3 GNAS

1.35e-031291920dcce7cb95bb3593626ecb34ed9da58c7de4e016
ToppCellLPS-antiTNF-Unknown-Endothelial|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MMP11 ARHGAP33

1.37e-03130192615c233c7c2600c1c2bc5cf5b1c501fc474564ef
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-AT_1-Differentiating_AT2|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NAPSA CELSR1

1.44e-031331925bf5e654653e2c340891f51e3f2a30441b7b6b2b
ToppCellLPS-antiTNF-Epithelial_alveolar-Mes-like|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NAPSA ARHGAP33

1.46e-0313419264979e1a056b7406e1be39c5ebe2f8d731ac3c17
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

NAPSA GFRA3

1.54e-03138192a88c3ae56b0af60f6e87cabade4f21e2bbb336f2
ToppCellFrontal_cortex-Neuronal-Inhibitory-iN2(Gad1Gad2)-Synpr|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

GLB1L2 GNAS

1.57e-03139192408bc31aa5e1c2b379f79198fe8b5411f8d7bd08
ToppCellControl-Epithelial_alveolar-AT_1-AT2_Progenitor|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NAPSA CELSR1

1.63e-0314219294e277f038f4006d99ff50222b0f5cf89bc3d46d
ToppCelldroplet-Lung-nan-3m-Myeloid-Classical_Monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.72e-03146192ed932d43e9efd064ee4b49ddef529f3d041be765
ToppCellLPS-IL1RA-Stromal_mesenchymal-Fibroblasts|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MMP11 ZNF385A

1.72e-0314619286cddd0e7f954547b7ffdccb0329cd5c4b725ac1
ToppCellEpithelial-B_(AT1-AT2-progenitors)|World / shred on cell class and cell subclass (v4)

NAPSA PROP1

1.72e-031461924511916904c1fac252cb68e871b782207f8137b3
ToppCelldroplet-Lung-nan-3m-Myeloid-classical_monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.72e-031461920d74962779055c774312d59fc3b1365163741c3a
ToppCellP15-Epithelial-epithelial_progenitor_cell-epithelial_progenitor_cell|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

NAPSA CELSR1

1.75e-03147192aba44c7057096483c4293a7ebcf8ccc8baed0231
ToppCellPND01-03-samps-Epithelial-Alveolar_epithelial-AT1_-_meso|PND01-03-samps / Age Group, Lineage, Cell class and subclass

MMP11 NAPSA

1.82e-031501926a13e4c4b9c9e54a5016573a37132465ec1c8f99
ToppCellmild_COVID-19_(asymptomatic)-NK_CD56bright|mild_COVID-19_(asymptomatic) / disease group, cell group and cell class (v2)

NAPSA GLB1L2

1.84e-031511922470162f4b56bc505db166a6eb0fa54847759df8
ToppCellfacs-Brain_Myeloid-Cerebellum_-18m-Myeloid-macrophage|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.84e-031511923105b8c0c401faa92e1ab8223d435b21ed45c5b7
ToppCellfacs-Lung-Endomucin-24m-Myeloid-classical_monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.89e-031531929c3220604b7fa4d91577b6c46960960f49644ca1
ToppCellfacs-Lung-Endomucin-24m-Myeloid-Classical_Monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.89e-03153192ba624782693b0daa642e50881dbf5f0663fea82d
ToppCellIIH-CD4-CD4_Treg|IIH / Condition, Cell_class and T cell subcluster

MMP11 CELSR1

1.89e-0315319228fb5d9f66f58741a5d43df004f80da3d910682e
ToppCellfacs-Brain_Myeloid-Cortex-24m-Myeloid-macrophage|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.92e-031541921e088b0d4a44267f46a9b643f46a1aba784686b1
ToppCelldroplet-Liver-LIVER_HEPATOCYTES-30m-Myeloid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA GLB1L2

1.92e-031541921e32969bee810adaf2d560f0824a16227df513d8
ToppCellPosterior_cortex-Neuronal-Inhibitory-iN2(Gad1Gad2)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

GLB1L2 GNAS

1.94e-03155192105d59d8a1bb8cb37eef2c1767d737b2108ac7c5
ToppCellIIH-CD8-memory_CD4|IIH / Condition, Cell_class and T cell subcluster

ARHGAP33 GLB1L2

1.97e-03156192e312fc4317d966fb2b570d1a4a3aa865f781ea93
ToppCell10x5'v1-week_12-13-Myeloid_DC-DC-DC2|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

NAPSA ZNF385A

1.97e-0315619203f3c5ffb27758fe63797143fcc938f9e8a4e10d
ToppCelldroplet-Liver-Npc-21m-Myeloid-myeloid_leukocyte|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.99e-03157192264b22d0ffc43049161843bb55d2eccbf5fca575
ToppCelldroplet-Liver-Npc-21m-Myeloid-macrophage/monocyte|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

1.99e-0315719267945d37027be62c880d3072afa7ca7e97c76c20
ToppCellTCGA-Endometrium-Primary_Tumor-Endometrial_Adenocarcinoma-Serous_adenocarcinoma-3|TCGA-Endometrium / Sample_Type by Project: Shred V9

NAPSA HPSE

1.99e-03157192ef70abc999be3a2c1eed7d21aef4b484f69d8567
ToppCellfacs-Lung-EPCAM-3m-Myeloid-classical_monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

2.01e-03158192ef5feb48161c339c7b71c576bdda61479d29dfac
ToppCellCD8+_Memory_T_cell-RSV-6|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster

SLC9B1 TAF1C

2.01e-031581925ae737757a49fc96bde1e57e02066f9f65654ea1
ToppCellControl-Epithelial_airway|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.01e-0315819235aee1c3b92169e73569331022833cb44ab7e7e8
ToppCellfacs-Lung-EPCAM-3m-Myeloid-Classical_Monocyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

2.01e-03158192c6e64b9b3342e37d54baadae8fb7dfb5d246e4cf
ToppCellP15-Epithelial-epithelial_progenitor_cell-epi_progenitor|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

NAPSA SLC9B1

2.04e-03159192a4bfd59c53237964fc24a24de5c1925fdd01db99
ToppCellLPS-IL1RA-Stromal_mesenchymal-Fibroblasts-MatrixFB_->_Myofibroblast|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MMP11 ZNF385A

2.07e-03160192778faada072e3abfa76a9a06fd4885fb63de7902
ToppCellCOPD-Epithelial-PNEC|World / Disease state, Lineage and Cell class

GFRA3 PROP1

2.07e-03160192cdea93317b0ebb801ddbe73bca6149ce2c727f16
ToppCellfacs-Brain_Myeloid-Cerebellum-24m-Myeloid-macrophage|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

2.07e-031601921f7acdc8b08152d5817fc53bbf47b4a22d9c91b5
ToppCellPND07-Endothelial-Endothelial_lymphatic-Lymphatic_EC|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CELSR1 GNAS

2.09e-031611929466b8658244116f8d21f2f88fb8c2d184b1bdf2
ToppCellChildren_(3_yrs)-Epithelial-lung_goblet_cell-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

CELSR1 GLB1L2

2.09e-031611922d63b279d9a5132e1c09b03930bf9039036d24a2
ToppCellLPS-IL1RA-Epithelial_airway|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.09e-03161192472c354f5ee148b37a5dfb795e83348ecb1643f1
ToppCellPND07-Endothelial-Endothelial_lymphatic|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CELSR1 GNAS

2.09e-03161192133b4fadb499e842c19f573f9cf09ce08c1d4813
ToppCellPND07-Endothelial-Endothelial_lymphatic-Lymphatic_EC-LEC|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CELSR1 GNAS

2.09e-03161192cb177ca10d848d0e25399ab5ebfcde1071fb94c2
ToppCelldroplet-Kidney-KIDNEY-1m-Epithelial-brush_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA GLB1L2

2.12e-031621926972d45f4bd4b6522bf93295f7e9dca7c6cba1f3
ToppCellCD8+_Memory_T_cell-FLU-1|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster

NAPSA ZNF385A

2.12e-0316219276f39935763848ea6e7917b2f9f1432c543063d9
ToppCellPND07-Endothelial-Endothelial_lymphatic-Lymphatic_EC-LEC-LEC_mature|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CELSR1 GNAS

2.12e-0316219296c6e94a10b124a1d25dcd705ec5aaa8609c1089
ToppCellE18.5-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-AT2-AT2_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

NAPSA SCAF4

2.14e-03163192d2fcd6f561748f7d29a051c504f016952ba32d0f
ToppCelldroplet-Lung-3m-Hematologic-myeloid-plasmacytoid_dendritic_cell-plasmacytoid_dendritic|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA HPSE

2.17e-03164192cfe07a1ebed8aecb08d0476db71fe314998d54aa
ToppCelldroplet-Lung-3m-Hematologic-myeloid-plasmacytoid_dendritic_cell|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA HPSE

2.17e-031641926d331e74efecb4733d87653f86cd67247be05025
ToppCellLPS-IL1RA-Epithelial_airway-Club_cells|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.19e-031651921a114eacaab598f755a173a3fed842ba91f689dd
ToppCelldroplet-Lung-18m-Hematologic-myeloid-myeloid_dendritic_cell-myeloid_dendritic_type_1|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA ZNF385A

2.19e-031651921c630f9ecde2e0243922a2be4b1ab5adcfcb0893
ToppCellCOVID-19_Mild-PLT_0|COVID-19_Mild / Disease Group and Platelet Clusters

HPSE ARHGAP33

2.19e-03165192083a14d3b0162cee4e79f7398b8fb739582b39ff
ToppCellfacs-Brain_Myeloid-Hippocampus-24m-Myeloid-macrophage|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

2.19e-03165192ab6ed7e30096c418e7be2d5eec33feeddd1387d9
ToppCellLPS-IL1RA-Epithelial_airway-Club_cells-Airway|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.19e-031651929cfd3c1d2c6d714fde83b90465f1f9741b0e50ce
ToppCellLPS-antiTNF-Epithelial_airway-Club_cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.22e-031661921df4bdf7c773cbfa6c93d7a901f9cd3f3fe07a3d
ToppCellInfluenza_Severe-pDC|Influenza_Severe / Disease group and Cell class

MMP11 NAPSA

2.22e-03166192b43a5cd4d28118cf6e56a435deb8ea9435608a90
ToppCellInfluenza_Severe-pDC|World / Disease group and Cell class

MMP11 NAPSA

2.22e-03166192bd25ce4c03c3d6cd9d986b9be1d355da52f0f2d7
ToppCellLPS-antiTNF-Epithelial_airway-Club_cells-Airway|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.22e-031661929628522e7af8f8edca733588a364ab2454ac5ca5
ToppCellLPS-antiTNF-Epithelial_airway|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.22e-03166192eb942ed68677e55c46cb039046f45686d4062d7c
ToppCelldroplet-Liver-Npc-18m-Myeloid-plasmacytoid_dendritic_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MMP11 ARHGAP33

2.25e-031671921248f809afbcccb42ce9e29cfe6fa1f6f6b65005
ToppCelldroplet-Lung-21m-Hematologic-myeloid-myeloid_dendritic_cell-myeloid_dendritic_type_1|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA ZNF385A

2.25e-031671929526e2c7673d569d04e0728a2526318e67432e0a
ToppCelldroplet-Lung-3m-Hematologic-myeloid-classical_monocyte|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA HPSE

2.25e-03167192d62d5dec30d006a9cc8f3bc5ccc578e10f105027
ToppCelldroplet-Liver-Npc-18m-Myeloid-plasmacytoid_dendritic_cells|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MMP11 ARHGAP33

2.25e-03167192a66552667aa6e8992c159df27a57c2e8ae14a9ce
ToppCellfacs-Heart-LV-24m-Lymphocytic|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

2.25e-031671924a669eafde3582a451614ad304769b47aa1d9578
ToppCellPosterior_cortex-Neuronal-Inhibitory|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

ZNF385A GNAS

2.25e-031671929a84f45345c75f2c8ff38a04245aadee2a26a240
ToppCelldroplet-Kidney-nan-18m-Epithelial-Epcam____brush_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA GLB1L2

2.25e-03167192ed7e785dcd25777f64e0c2596ada4f5a5ea17121
ToppCellChildren_(3_yrs)-Mesenchymal-chondrocyte-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

NAPSA PRCC

2.25e-03167192f4943fb5001475ddab82a0273bcbb3fa68fdd7bd
ToppCellCV-Mild-6|CV / Virus stimulation, Condition and Cluster

ARHGAP33 ZNF385A

2.25e-03167192cf2ed0b6d17a16f9a2318879ce8856d5983ad3cf
ToppCelldroplet-Liver-LIVER-NPC-1m-Myeloid-plasmacytoid_dendritic_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HPSE GFRA3

2.27e-03168192a007758c219d3d5db2b5529f29af63be0d408304
ToppCelldroplet-Liver-Npc-18m-Myeloid-macrophage/monocyte|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

2.27e-0316819222c89d4eb44573f6301069ec7ca7cbd0dd958403
ToppCelldroplet-Lung-3m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l2|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA HPSE

2.27e-031681923d8c431a3c8899383212fe6a7627889c40c5f3ef
ToppCellfacs-Lung-18m-Hematologic-myeloid-classical_monocyte|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA HPSE

2.27e-031681920ffad93ba2fb5d4cfda2c13011059555475dcfc8
ToppCelldroplet-Lung-18m-Hematologic-myeloid-intermediate_monocyte|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA HPSE

2.27e-0316819200cff4698db14e03ca1d1b409e5ed1ad23b12615
ToppCellP28-Epithelial-epithelial_progenitor_cell|P28 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

NAPSA GFRA3

2.27e-0316819203c95ad3684caec7a6d581006b237cc5fa230685
ToppCelldroplet-Liver-Npc-18m-Myeloid-myeloid_leukocyte|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA HPSE

2.27e-03168192ce5e92a1df3acfa5cd8d5a134e4af231dc592a13
ToppCellBAL-Severe-Myeloid-cDC-cDC-cDC_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

NAPSA ZNF385A

2.27e-03168192d60f7cd8269f373827f49c7785002cb38e4570a9
ToppCellControl-Epithelial_airway-Club_cells|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CELSR1 GFRA3

2.27e-03168192e85bc5398eb36b2b0773a8a7082e3ba740452165
ToppCelldroplet-Liver-LIVER-NPC-1m-Myeloid-plasmacytoid_dendritic_cells|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HPSE GFRA3

2.27e-03168192e8878ec68b21c8d5694d7209b816d2f869673164
ToppCelldroplet-Kidney-KIDNEY-1m-Epithelial-Epcam____brush_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA GLB1L2

2.27e-0316819235ce3b2b9c9997d4c101da5949c7271d6a6b8f12
ToppCell367C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_0|CD8+_Cytotoxic_T-cell / Donor, Lineage, Cell class and subclass (all cells)

CELSR1 ARHGAP33

2.27e-031681922fb2d916eb5000a637240d38e47a9b4f61f9f83f
ToppCelldroplet-Lung-1m-Hematologic-myeloid-myeloid_dendritic_cell|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA ZNF385A

2.27e-0316819299148986aa5628f67d85258c171b254be77a071c
ToppCelldroplet-Liver-Npc-18m-Lymphocytic-B_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA ARHGAP33

2.27e-03168192ce9fae8b295c668b0959d5007a8bcd401d80e258
ToppCelldroplet-Lung-LUNG-30m-Myeloid-Myeloid_Dendritic_Type_1|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAPSA ZNF385A

2.27e-031681922c996d09b6a8ccd3c708146eca310b02eafff425
ToppCellfacs-Lung-18m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l2|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

NAPSA HPSE

2.27e-03168192ab1fb9b2cc7c5853b7fbd373e1784a9a31f96d38
ComputationalGenes in the cancer module 20.

MMP11 CSTF3 NFIC

1.20e-0483133MODULE_20
DrugFenoprofen calcium salt dihydrate [53746-45-5]; Up 200; 7.2uM; PC3; HT_HG-U133A

MMP11 CDK13 TAF1C ARHGAP33

1.65e-051901944274_UP
Drugpioglitazone HCl; Up 200; 10uM; MCF7; HT_HG-U133A

CDK13 TAF1C ARHGAP33 SCAF4

1.79e-051941947523_UP
DrugNafronyl oxalate [3200-06-4]; Down 200; 8.4uM; HL60; HT_HG-U133A

RBM42 CDK13 NFIC SCAF4

1.83e-051951941267_DN
DrugProcaine hydrochloride [51-05-8]; Up 200; 14.6uM; PC3; HT_HG-U133A

CELSR1 GLB1L2 GNAS SCAF4

1.90e-051971941796_UP
DrugPyrantel tartrate [33401-94-4]; Down 200; 11.2uM; PC3; HT_HG-U133A

RBM42 NFIC TAF1C GNAS

1.94e-051981942097_DN
DrugPapaverine hydrochloride [61-25-6]; Up 200; 10.6uM; MCF7; HT_HG-U133A

MMP11 CDK13 GLB1L2 GNAS

1.98e-051991942747_UP
DrugEtofylline [519-37-9]; Up 200; 17.8uM; PC3; HT_HG-U133A

MMP11 CDK13 TAF1C SCAF4

1.98e-051991945048_UP
Drugindoxyl-beta-D-glucuronide

HPSE GNAS

2.37e-059192CID002733785
DiseaseQT interval

CDK13 NFIC GFRA3

3.32e-03534173EFO_0004682

Protein segments in the cluster

PeptideGeneStartEntry
PLPLLRQPPIMQPPL

ZNF385A

11

Q96PM9
PIQMPGRPLRLPPPL

GNAS

401

P84996
MAPPPPPVLPVLLLL

CELSR1

1

Q9NYQ6
TLPPLPLPPMLPEDK

CDK13

606

Q14004
LALAMPLPEPEPLPL

RBM42

286

Q9BTD8
LMPPPPRLPPHLAVP

CPSF7

266

Q8N684
PVPPAAVVLMKLLPP

CSTF3

611

Q12996
KPALPPPLMLLLLGP

HPSE

6

Q9Y251
MESPLPPPPLSLLRP

ARHGAP33

871

O14559
PPVVLMLLLLLPPSP

GFRA3

11

O60609
MSPPPPPLLLLLLSL

C4orf48

11

Q5BLP8
IPLPPPPDLLPKMPY

GLB1L2

371

Q8IW92
LIPLQRPPGMPPPHL

SCAF4

856

O95104
LPPMLLLLLQPPPLL

MMP11

16

P24347
QMLAPAFPPPLLLPP

PRCC

56

Q92733
ATPGPLPMLPPLIDP

TAF1C

61

Q15572
MLAPPPPGLPRLALP

NFIC

441

P08651
RIPLVPPLPPLLGML

SLC9B1

116

Q4ZJI4
LPCPPPPPMLPLSLE

PROP1

206

O75360
MSPPPLLQPLLLLLP

NAPSA

1

O96009