Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunction[heparan sulfate]-glucosamine N-sulfotransferase activity

NDST4 NDST2

1.49e-054322GO:0015016
GeneOntologyMolecularFunctionN-acetylglucosamine deacetylase activity

NDST4 NDST2

1.49e-054322GO:0050119
GeneOntologyMolecularFunctionheparan sulfate sulfotransferase activity

NDST4 NDST2

2.58e-0415322GO:0034483
GeneOntologyMolecularFunctionscaffold protein binding

BIRC8 LYN NCK2

4.40e-0493323GO:0097110
GeneOntologyMolecularFunctioncysteine-type endopeptidase inhibitor activity involved in apoptotic process

BIRC8 NAIP

6.72e-0424322GO:0043027
GeneOntologyMolecularFunctionprotein serine/threonine kinase binding

BIRC8 NAIP

6.72e-0424322GO:0120283
GeneOntologyMolecularFunctiondeacetylase activity

NDST4 NDST2

1.87e-0340322GO:0019213
GeneOntologyMolecularFunctionacetylglucosaminyltransferase activity

EXT1 MGAT5

2.57e-0347322GO:0008375
GeneOntologyMolecularFunctionprotein phosphatase inhibitor activity

MGAT5 PHACTR4

2.91e-0350322GO:0004864
GeneOntologyMolecularFunctionphosphatase inhibitor activity

MGAT5 PHACTR4

3.38e-0354322GO:0019212
GeneOntologyMolecularFunctioncysteine-type endopeptidase regulator activity involved in apoptotic process

BIRC8 NAIP

3.38e-0354322GO:0043028
GeneOntologyMolecularFunctionsulfotransferase activity

NDST4 NDST2

3.50e-0355322GO:0008146
GeneOntologyMolecularFunctionenzyme inhibitor activity

CLSTN3 MGAT5 PHACTR4 NAIP

4.93e-03435324GO:0004857
GeneOntologyMolecularFunctiontransferase activity, transferring sulphur-containing groups

NDST4 NDST2

6.25e-0374322GO:0016782
GeneOntologyMolecularFunctionenzyme regulator activity

BIRC8 CLSTN3 MGAT5 LYN FGD4 PHACTR4 NAIP

6.26e-031418327GO:0030234
GeneOntologyMolecularFunctionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides

NDST4 NDST2

7.45e-0381322GO:0016811
GeneOntologyBiologicalProcessheparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process

NDST4 EXT1 NDST2

1.89e-078323GO:0015014
GeneOntologyBiologicalProcessheparin biosynthetic process

NDST4 EXT1 NDST2

5.55e-0711323GO:0030210
GeneOntologyBiologicalProcessheparin metabolic process

NDST4 EXT1 NDST2

2.27e-0617323GO:0030202
GeneOntologyBiologicalProcessheparan sulfate proteoglycan biosynthetic process

NDST4 EXT1 NDST2

2.15e-0535323GO:0015012
GeneOntologyBiologicalProcessproteoglycan biosynthetic process

NDST4 EXT1 NDST2

1.73e-0470323GO:0030166
GeneOntologyBiologicalProcesspolysaccharide biosynthetic process

NDST4 EXT1 NDST2

2.21e-0476323GO:0000271
GeneOntologyBiologicalProcessglycosaminoglycan biosynthetic process

NDST4 EXT1 NDST2

2.21e-0476323GO:0006024
GeneOntologyBiologicalProcessaminoglycan biosynthetic process

NDST4 EXT1 NDST2

2.57e-0480323GO:0006023
DomainHSNSD

NDST4 NDST2

1.49e-054302PF12062
DomainHeparan_SO4_deacetylase

NDST4 NDST2

1.49e-054302IPR021930
DomainBIR

BIRC8 NAIP

6.94e-058302SM00238
DomainBIR_REPEAT_2

BIRC8 NAIP

6.94e-058302PS50143
Domain-

BIRC8 NAIP

6.94e-0583021.10.1170.10
DomainBIR_rpt

BIRC8 NAIP

6.94e-058302IPR001370
DomainBIR_REPEAT_1

BIRC8 NAIP

6.94e-058302PS01282
DomainBIR

BIRC8 NAIP

6.94e-058302PF00653
DomainTUDOR

PHF20 TDRD9

8.54e-0427302SM00333
DomainTudor

PHF20 TDRD9

1.06e-0330302IPR002999
DomainSulfotransferase_dom

NDST4 NDST2

1.52e-0336302IPR000863
DomainSulfotransfer_1

NDST4 NDST2

1.52e-0336302PF00685
Domain-

NDST4 TDRD9 DYNC2H1 NDST2 NAIP

6.23e-037463053.40.50.300
DomainP-loop_NTPase

NDST4 TDRD9 DYNC2H1 NDST2 NAIP

1.06e-02848305IPR027417
DomainSH2

LYN NCK2

1.14e-02101302PF00017
PathwayKEGG_MEDICUS_REFERENCE_HEPARAN_SULFATE_BIOSYNTHESIS

NDST4 EXT1 NDST2

7.09e-0711243M47921
PathwayKEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE

NDST4 EXT1 NDST2

1.10e-0526243M7330
PathwayREACTOME_HS_GAG_BIOSYNTHESIS

NDST4 EXT1 NDST2

1.54e-0529243MM14802
PathwayREACTOME_HS_GAG_BIOSYNTHESIS

NDST4 EXT1 NDST2

1.89e-0531243M685
PathwayWP_GLYCOSAMINOGLYCAN_SYNTHESIS_IN_FIBROBLASTS

NDST4 EXT1 NDST2

4.43e-0541243M48095
PathwayREACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM

NDST4 EXT1 NDST2

1.02e-0454243MM14633
PathwayREACTOME_HEPARAN_SULFATE_HEPARIN_HS_GAG_METABOLISM

NDST4 EXT1 NDST2

1.19e-0457243M692
PathwayREACTOME_EPH_EPHRIN_SIGNALING

LYN ARPC1B NCK2

1.77e-0465243MM14911
PathwayKEGG_MEDICUS_PATHOGEN_ESCHERICHIA_EAE_TIR_TO_ACTIN_SIGNALING_PATHWAY

ARPC1B NCK2

3.72e-0417242M47728
PathwayREACTOME_EPH_EPHRIN_SIGNALING

LYN ARPC1B NCK2

4.93e-0492243M27201
PathwayKEGG_MEDICUS_REFERENCE_EGF_EGFR_ACTIN_SIGNALING_PATHWAY

ARPC1B NCK2

5.72e-0421242M47722
PathwayREACTOME_INACTIVATION_OF_CSF3_G_CSF_SIGNALING

CSF3R LYN

8.14e-0425242M41829
PathwayREACTOME_METABOLISM_OF_CARBOHYDRATES

NDST4 EXT1 G6PC2 NDST2

1.05e-03271244MM15406
PathwayREACTOME_GLYCOSAMINOGLYCAN_METABOLISM

NDST4 EXT1 NDST2

1.15e-03123243MM14623
PathwayREACTOME_SIGNALING_BY_CSF3_G_CSF

CSF3R LYN

1.17e-0330242M41825
PathwayPID_EPHRINB_REV_PATHWAY

LYN NCK2

1.17e-0330242M257
PathwayREACTOME_GLYCOSAMINOGLYCAN_METABOLISM

NDST4 EXT1 NDST2

1.23e-03126243M695
PathwayREACTOME_METABOLISM_OF_CARBOHYDRATES

NDST4 EXT1 G6PC2 NDST2

1.31e-03288244M16864
PathwayPID_PDGFRB_PATHWAY

LYN ARPC1B NCK2

1.32e-03129243M186
PathwayREACTOME_EPHB_MEDIATED_FORWARD_SIGNALING

LYN ARPC1B

1.78e-0337242MM15022
PathwayWP_MICROGLIA_PATHOGEN_PHAGOCYTOSIS_PATHWAY

LYN ARPC1B

2.08e-0340242M39695
PathwayREACTOME_EPHB_MEDIATED_FORWARD_SIGNALING

LYN ARPC1B

2.29e-0342242M27308
Pubmed

Granulocyte colony-stimulating factor receptor signaling involves the formation of a three-component complex with Lyn and Syk protein-tyrosine kinases.

CSF3R LYN

2.46e-0633228197119
Pubmed

Functional overlap between chondroitin and heparan sulfate proteoglycans during VEGF-induced sprouting angiogenesis.

EXT1 NDST2

2.46e-06332222345168
Pubmed

Small changes in lymphocyte development and activation in mice through tissue-specific alteration of heparan sulphate.

EXT1 NDST2

2.46e-06332218479348
Pubmed

A genetic approach to Mammalian glycan function.

EXT1 MGAT5 NDST2

2.82e-063032312676797
Pubmed

Lowered expression of heparan sulfate/heparin biosynthesis enzyme N-deacetylase/n-sulfotransferase 1 results in increased sulfation of mast cell heparin.

NDST4 NDST2

4.92e-06432222049073
Pubmed

Regulated translation of heparan sulfate N-acetylglucosamine N-deacetylase/n-sulfotransferase isozymes by structured 5'-untranslated regions and internal ribosome entry sites.

NDST4 NDST2

4.92e-06432212070138
Pubmed

The putative tumor suppressors EXT1 and EXT2 form a stable complex that accumulates in the Golgi apparatus and catalyzes the synthesis of heparan sulfate.

EXT1 NDST2

8.19e-06532210639137
Pubmed

Multiple isozymes of heparan sulfate/heparin GlcNAc N-deacetylase/GlcN N-sulfotransferase. Structure and activity of the fourth member, NDST4.

NDST4 NDST2

8.19e-06532211087757
Pubmed

The inhibitors of apoptosis: there is more to life than Bcl2.

BIRC8 NAIP

1.72e-05732214634619
Pubmed

The inhibitors of apoptosis (IAPs) and their emerging role in cancer.

BIRC8 NAIP

1.72e-0573229916987
Pubmed

IAP family proteins--suppressors of apoptosis.

BIRC8 NAIP

1.72e-0573229990849
Pubmed

FGF signaling sustains the odontogenic fate of dental mesenchyme by suppressing β-catenin signaling.

NDST4 NDST2

2.29e-05832224067353
Pubmed

Independent SH2-binding sites mediate interaction of Dok-related protein with RasGTPase-activating protein and Nck.

LYN NCK2

2.94e-05932210428862
Pubmed

A mutant-cell library for systematic analysis of heparan sulfate structure-function relationships.

EXT1 NDST2

2.94e-05932230377379
Pubmed

Developmental and regional expression of heparan sulfate sulfotransferase genes in the mouse brain.

NDST4 NDST2

4.49e-051132215944372
Pubmed

Variant heparan sulfates synthesized in developing mouse brain differentially regulate FGF signaling.

NDST4 NDST2

5.38e-051232212460940
Pubmed

Evolutionary plasticity of segmentation clock networks.

EPRS1 WLS

7.41e-051432221652651
Pubmed

The SRC-family tyrosine kinase HCK shapes the landscape of SKAP2 interactome.

LYN NCK2

7.41e-051432229568343
Pubmed

Heparan sulfate biosynthetic gene Ndst1 is required for FGF signaling in early lens development.

NDST4 NDST2

1.54e-042032217107998
Pubmed

NDST1-dependent heparan sulfate regulates BMP signaling and internalization in lung development.

NDST4 NDST2

1.87e-042232219299468
Pubmed

The B-cell antigen receptor signals through a preformed transducer module of SLP65 and CIN85.

LYN NCK2

2.24e-042432221822214
Pubmed

The MAFB transcription factor impacts islet α-cell function in rodents and represents a unique signature of primate islet β-cells.

NDST4 G6PC2

3.05e-042832226554594
Pubmed

A Role for Sensory end Organ-Derived Signals in Regulating Muscle Spindle Proprioceptor Phenotype.

NDST4 WLS

4.00e-043232230926747
Pubmed

Chondrocytes respond to an altered heparan sulfate composition with distinct changes of heparan sulfate structure and increased levels of chondroitin sulfate.

EXT1 NDST2

5.35e-043732232201365
CytobandEnsembl 112 genes in cytogenetic band chr8q12

GGH LYN

1.89e-0392322chr8q12
GeneFamilyRing finger proteins|Baculoviral IAP repeat containing|Caspase recruitment domain containing

BIRC8 NAIP

3.58e-058212419
GeneFamilySulfotransferases, membrane bound

NDST4 NDST2

8.35e-0437212763
GeneFamilyTudor domain containing

PHF20 TDRD9

8.35e-0437212780
GeneFamilySH2 domain containing

LYN NCK2

6.05e-03101212741
ToppCellMyeloid-C_(Cd16+_Monocyte)|World / shred on cell class and cell subclass (v4)

PRAP1 GVINP1 LYN FGD4

1.92e-06125324c73a77340e79f73fd1f900724e82a94d82e6b1bf
ToppCellBLOOD--(3)_MNP-(3)_Classical_Mono-1|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

CSF3R WLS TDRD9 NAIP

3.19e-06142324395f80e99be4a0ef07fb9d65c74399e7e67c9a8d
ToppCellLPS-IL1RA+antiTNF-Myeloid-Neutrophils|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CSF3R LYN FGD4 NAIP

8.53e-06182324243c783675df495ea4112dbf710712c44ea6b4f1
ToppCellLPS-IL1RA+antiTNF-Myeloid-Neutrophils-Neutrophils|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CSF3R LYN FGD4 NAIP

8.53e-0618232418790a394dc32b3cef99cdbf826392c520e38b4a
ToppCellCOPD-Myeloid-cMonocyte|World / Disease state, Lineage and Cell class

EXT1 CSF3R FGD4 NAIP

8.90e-06184324ceec41ed5636032aaf7716d1203816ea58bd39bd
ToppCellControl-Myeloid-cMonocyte|Myeloid / Disease state, Lineage and Cell class

EXT1 CSF3R FGD4 NAIP

9.69e-0618832447126c371a242c937499fd278a74a882df8f759c
ToppCellCOPD-Myeloid-cMonocyte|COPD / Disease state, Lineage and Cell class

EXT1 CSF3R FGD4 NAIP

9.89e-06189324d29f3a0bd23e6eb46389e6eb7ef21851c7b57545
ToppCellAdult|World / Lineage, Cell type, age group and donor

TMPRSS2 CSF3R LYN FGD4

9.89e-061893245cd285bfad973125d46d704fec18b21266a63379
ToppCellControl-Myeloid-cMonocyte|Control / Disease state, Lineage and Cell class

EXT1 CSF3R FGD4 NAIP

1.05e-05192324ad04c9c4bdebf94615cee1904ca48197e62c923b
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_aging_sig-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

CSF3R LYN FGD4 NCK2

1.14e-05196324e54c08f88779f9fd453a4f5b85aed1f460d8a1e1
ToppCell3'-Parenchyma_lung-Immune_Myeloid-Myeloid_monocytic|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN ARPC1B NAIP

1.16e-05197324f431f11196dc4332933b5d71c7c7408d54c2dedc
ToppCell3'-Broncho-tracheal-Immune_Myeloid|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN ARPC1B NAIP

1.16e-05197324d568354aff89ac84dd06360f19100ef578a041ed
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Myeloid_monocytic-classical_monocyte-Classical_monocytes-Classical_monocytes_L.1.2.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN FGD4 NAIP

1.16e-051973240c059476a8cdc6ac71a01d9c414295177f45f8de
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Myeloid_monocytic-classical_monocyte-Classical_monocytes|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN FGD4 NAIP

1.19e-051983244b6767bd6fd4bd43eed18fd4a34c20923fa795da
ToppCellURO-Myeloid|URO / Disease, Lineage and Cell Type

CSF3R LYN ARPC1B NAIP

1.19e-0519832465a8879da871ddebeda945f312ea7c1065732040
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Myeloid_monocytic-classical_monocyte|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN FGD4 NAIP

1.19e-0519832418daf83309813f914b17bd226ea8a9269a26b107
ToppCell3'-Broncho-tracheal-Immune_Myeloid-Myeloid_monocytic|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN FGD4 NAIP

1.19e-0519832472c7474e084d1334a09c0a3b0f3c3137038794c8
ToppCell5'-GW_trimst-1.5-SmallIntestine-Hematopoietic-Myeloid|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R LYN ARPC1B NAIP

1.19e-0519832479c8ab15e73f727c5e110ab9eab3ccb5edf9f714
ToppCell3'_v3-Lung-Myeloid_Monocytic|Lung / Manually curated celltypes from each tissue

CSF3R LYN ARPC1B NAIP

1.21e-051993243e14f9a62d6414add8d5f681be184b4625001838
ToppCell10x_3'_v3-blood_(10x_3'_v3)-myeloid|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CSF3R LYN ARPC1B NAIP

1.21e-05199324126a0ebd40e55c0dfb5e7c7dd8fdd733da6aa323
ToppCell3'_v3-bone_marrow-Myeloid_Monocytic|bone_marrow / Manually curated celltypes from each tissue

CSF3R LYN FGD4 NAIP

1.21e-0519932451a766f823a9d50a3b1d59d0df2f5241a6b44c2b
ToppCellSepsis-URO-Myeloid|URO / Disease, condition lineage and cell class

CSF3R LYN ARPC1B NAIP

1.24e-05200324334427a7e1b2b077b1fd33f7ce7d29d823c2f7d6
ToppCellnormal_Pleural_Fluid-Myeloid_cells|normal_Pleural_Fluid / Location, Cell class and cell subclass

CSF3R LYN ARPC1B NAIP

1.24e-05200324c87d6c59eb4e4118ef151f199b980221918444ae
ToppCellnormal_Pleural_Fluid-Myeloid_cells-Pleural_Mac|normal_Pleural_Fluid / Location, Cell class and cell subclass

CSF3R LYN ARPC1B NAIP

1.24e-052003241798eb621dccb4ccae18d9b3df558a6428d30542
ToppCellmild-HLA-DR+_CD83+_Monocyte|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

CSF3R LYN FGD4 NAIP

1.24e-05200324934c2efc780318c66d667ca75be0de350361d351
ToppCellCOVID_non-vent-Myeloid|COVID_non-vent / Disease condition, Lineage, Cell class and subclass

CSF3R LYN ARPC1B NAIP

1.24e-05200324a40768e8e58c86b8e20bc188b9274ebe412fc765
ToppCell5'-Parenchyma_lung-Immune_Myeloid-Myeloid_monocytic|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN ARPC1B NAIP

1.24e-0520032447abc2ebf5d6575af59aa044b584acf63a463bbb
ToppCellcontrol-Neutrophil|control / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

CSF3R WLS LYN NAIP

1.24e-05200324b5d197472799cc61d7497faed91ac2564ae4930a
ToppCell10x_3'_v3-spleen_(10x_3'_v3)-myeloid|spleen_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CSF3R LYN FGD4 NAIP

1.24e-052003246da31ce0a70ad5621444d731c082c0db572c20c5
ToppCellcontrol-HLA-DR-_S100A+_Monocyte|control / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

CSF3R WLS FGD4 NAIP

1.24e-052003249e3e13a68bc1110fa000ec2d80f4c654ddbce17e
ToppCellCOVID_non-vent-Myeloid-Monocytic-CD14+_Monocyte|COVID_non-vent / Disease condition, Lineage, Cell class and subclass

CSF3R LYN ARPC1B NAIP

1.24e-05200324465ed50e0b92bb8c27ffe56d816f063a45b52be9
ToppCellCOVID_non-vent-Myeloid-Monocytic|COVID_non-vent / Disease condition, Lineage, Cell class and subclass

CSF3R LYN ARPC1B NAIP

1.24e-052003244243a9d32f3a11141284d0d944cb81194b532876
ToppCellMyeloid-Myeloid-C_(Cd16+_Monocyte)|Myeloid / shred on cell class and cell subclass (v4)

PRAP1 GVINP1 FGD4

8.05e-05117323d1936e76a935216783a73ab414e4147fa48e68eb
ToppCellLPS-IL1RA-Epithelial_alveolar-Mes-Like-AT1_Progenitor|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NDST4 SI TDRD9

8.05e-05117323f3c77b234e461566aac81ede0ef84008c9a9f51e
ToppCellprimary_visual_cortex-Neuronal-glutamatergic_neuron-L5_PT-L5_PT_VISp_Chrna6|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

TMPRSS2 WLS ADAMTSL2

9.79e-05125323fac8a9bff83abb8976013ff7d2b4ce0b68fbb70a
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Oligodendroglioma-3|TCGA-Brain / Sample_Type by Project: Shred V9

NDST4 PHF20 FREM3

1.23e-04135323b128596653a5e3b64ed7f657bbfeda35438e2e48
ToppCellfacs-Trachea-3m-Hematologic-myeloid-granulocyte-granulocyte_l8|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

GGH CSF3R LYN

1.65e-041493230f9d2209e8a02371b9f93c0a2fb6f79a4ce48ef1
ToppCellfacs-Trachea-nan-3m-Myeloid-granulocyte|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GGH CSF3R LYN

1.65e-041493239c4837aa63e46382ff45a41c72beb5722b3ada19
ToppCellMyeloid-C_(Monocyte)|World / shred on cell class and cell subclass (v4)

GVINP1 LYN ARPC1B

1.74e-041523239145dc014ed7f154c158d454dc2b9754396afcca
ToppCellsaliva-Severe-critical_progression_d12-22_with-steroid-Myeloid-Macrophage-macrophage,_alveolar-Macro_c1-C1QC|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

GGH MGAT5 G6PC2

1.88e-04156323abea3c183d32062b009a79a2bdf861021989c7ef
ToppCellmild_COVID-19_(asymptomatic)-CD4+_T_naive|World / disease group, cell group and cell class (v2)

FREM3 ADAMTSL2 NCK2

1.92e-0415732323879e65a6acc33d9aad096cd23604a77b0ac9c2
ToppCell3'-Airway_Nasal-Immune_Myeloid-Myeloid_monocytic-classical_monocyte-Classical_monocytes-Classical_monocytes_L.1.2.0.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R ARPC1B NAIP

2.07e-041613233a5f2877e3b29463a3a6da05009b0ab8747b4c47
ToppCellMyeloid|World / shred on cell class and cell subclass (v4)

CSF3R GVINP1 ARPC1B

2.07e-04161323aee407d3739dba2d5216dcdb1579e7e4f483123d
ToppCellPBMC_fresh-frozen-Severe-critical_convalescent_d14-21-Myeloid-Monocytic-Classical_Monocyte-Mono_c1-CD14-CCL3|Severe-critical_convalescent_d14-21 / Compartment, severity and other cell annotations on 10x 3' data (130k)

NDST4 CSF3R WLS

2.10e-0416232388576622af741cf5f754e328bd6d53385ef53be6
ToppCell10x_3'_v2v3-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_pro-infl_II-E|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

FGD4 ADAMTSL2 NCK2

2.14e-04163323a6e272e043859858084b8d4d96fa4ff9e6eca454
ToppCellPND28-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_mature|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.22e-041653231d844d19ff9b49dd0f61f0b24799e172076771ef
ToppCellPND28-Immune-Immune_Myeloid-Monocytic-Macrophage|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.22e-041653239a6abd0e6b11860231ce5e845c87b8d66f3ef697
ToppCellPND28-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.22e-04165323433771abefc5bcb89bdae64af45cce7407bffe5d
ToppCellPND14-Immune-Immune_Myeloid|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.22e-04165323e37d00084f58fbd25f66ee65be510c030167084e
ToppCellfacs-Lung-nan-3m-Myeloid|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CSF3R LYN FGD4

2.22e-04165323720649f330382ea2a68c64a5344160a048afb8f1
ToppCelldroplet-Thymus-nan-21m-Myeloid-nan|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GGH LYN SCN4A

2.34e-0416832369dd747be46e7fbcec571cddd6dee374b9c2507a
ToppCellPND10-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.38e-04169323c6750c45c44be68aea39e918ba97c6f875ccea34
ToppCellPND10-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_mature|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.38e-0416932315d5758d94a14a909d1d0c8bba9ce497a33d1512
ToppCellPND03-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_mature|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

LYN FGD4 ARPC1B

2.47e-0417132392cd1d7ec5bc0a77f81b915d237fac4075ba01e3
ToppCelldroplet-Lung-18m-Hematologic-myeloid|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

CSF3R LYN ARPC1B

2.47e-0417132333869b9fab2c94cb33f1cc659073fcf2bb30c22d
ToppCellPND14-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.51e-04172323e72966ced5f2ee9e24ce9fd820d99a69a482a607
ToppCellPND14-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_mature|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.51e-0417232383730ea3b240b8e2f2a9fb6c34dd1408050867ff
ToppCellPND03-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

LYN FGD4 ARPC1B

2.55e-041733236d29e142d043dfd1ed442812358ac463b63b5e3f
ToppCell3'-Airway_Nasal-Immune_Myeloid-Myeloid_monocytic-classical_monocyte-Classical_monocytes-Classical_monocytes_L.1.2.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CSF3R LYN FGD4

2.64e-04175323cd42020fe57afeaadfbd3ef6d7375e66d71e9669
ToppCellPND10-Immune-Immune_Myeloid-Monocytic-Macrophage|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CSF3R FGD4 ARPC1B

2.64e-04175323a8b05972e1bec4de73feaa6c4a9bcbe6b50c8044
ToppCellsevere-Myeloid-Neutrophils_1|Myeloid / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

CSF3R WLS LYN

2.73e-04177323d1ad35ee3d2a84b1d01126d0a38464ab858c00d0
ToppCelldroplet-Thymus-nan-24m-Lymphocytic-Double_negative_Thymocyte,_DN4_(Cd8-,_Cd4-),_some_undergoing_VDJ_recombination_|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GGH GVINP1 TDRD9

2.78e-04178323408e41c853f608965cef9111fb87fdc311cdc7a8
ToppCell3'-GW_trimst-1.5-LargeIntestine-Hematopoietic|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R LYN NAIP

2.82e-04179323716856b2c7c660bf5ce00e63efeda6ed121f2baa
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_prolif-G|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

LYN ARPC1B NCK2

2.82e-041793232832a9ea1c84b809f4bb5fb39d7ad50af4b33fa9
ToppCell5'-Adult-Appendix-Hematopoietic-Myeloid-LYVE1+_Macrophage|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R NDST2 NAIP

2.87e-0418032366c7b02d85e32ba3e7530d0c4aff17e7525ccdd8
ToppCell(05)_Ciliated-(4)_1wkpi|(05)_Ciliated / shred by cell type and Timepoint

TMPRSS2 CSF3R ARPC1B

2.87e-0418032385fc9b164147b28545e2397d32302eea03ef6346
ToppCellLPS-IL1RA-Myeloid-Neutrophils-Neutrophils|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CSF3R LYN FGD4

2.87e-04180323c0c07937839652e01df10cc1e70aa005800ea6f6
ToppCellLPS-IL1RA-Myeloid-Neutrophils|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CSF3R LYN FGD4

2.87e-04180323079c199425dd3c220f03c6dca1823946f07580a1
ToppCell5'-GW_trimst-2-LymphNode-Hematopoietic-Myeloid-Macrophages|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R LYN ARPC1B

2.91e-0418132308bc6fe2a11d31a7e5e4a4552b04c0ebc2aefc59
ToppCell3'-GW_trimst-2-LargeIntestine-Hematopoietic-Myeloid-Monocytes|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R LYN ARPC1B

2.91e-04181323bad77767e64cc093a827a6b0f3f401f3f108e457
ToppCell5'-Adult-LymphNode-Hematopoietic-Myeloid-Monocytes|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R ARPC1B NAIP

2.96e-041823231fb9bdf2e9f0a9c230f109b471672f9c31e27c82
ToppCellLPS_only-Myeloid|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CSF3R LYN FGD4

2.96e-04182323666ac86ee5f6fa9241ae8d80340743707e54b278
ToppCellcellseq2-Immune-Hematopoietic-Granulocytic-Neutrophil|cellseq2 / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CSF3R TDRD9 NAIP

2.96e-041823231932d77491d6d46278f01fd70eb469ef1b356619
ToppCellsevere-Myeloid-Neutrophils_1|severe / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

CSF3R WLS LYN

3.01e-0418332360a6112aa4fc4f5debda4c7e81b37539ba2e4e6e
ToppCellcellseq2-Immune-Hematopoietic-Granulocytic|cellseq2 / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CSF3R TDRD9 NAIP

3.01e-04183323cfbf8539104cef9ca830ad4f6bb278746f7078f7
ToppCell10x_3'_v2v3-Non-neoplastic-Myeloid-TAM-BDM-TAM-BDM_anti-infl-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

CSF3R FGD4 NCK2

3.01e-0418332362f76907e501bba6e1010b5c447faed5f0ef93a7
ToppCellcellseq2-Immune-Hematopoietic|cellseq2 / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CSF3R TDRD9 NAIP

3.01e-04183323324ec4374b552da7ce03809945b3a0798342d4ba
ToppCellSmart-seq2-tissue-resident_(Smart-seq2)-myeloid-myeloid_granulocytic-neutrophil|tissue-resident_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CSF3R TDRD9 NAIP

3.06e-041843237ecdf2645e9378cf2f5ce4557f2cf100e6f184ba
ToppCellChildren_(3_yrs)-Immune-interstitial_macrophage_(C1Q_positive)-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

MGAT5 WLS NAIP

3.11e-041853238207f9eff113eed429e961748c6b17d672a13b33
ToppCellLPS-IL1RA-Myeloid|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CSF3R LYN FGD4

3.11e-041853239b5fd87ea9d05e051ff1251578ecfbe5e8652853
ToppCellCOPD-Lymphoid-B|World / Disease state, Lineage and Cell class

MGAT5 PHF20 LYN

3.11e-0418532322891ed75e25ef30dfa541cb82d85e08ce07e7d9
ToppCell10x5'-bone_marrow-Hematopoietic_progenitors-Cycling_pre-Myeloid-2|bone_marrow / Manually curated celltypes from each tissue

GGH CSF3R NAIP

3.16e-04186323e82d5e7a976b9cfa2b4640c7a7cd1cfea19c4806
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_2-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

TMPRSS2 CSF3R FGD4

3.21e-041873235df9e1f5ca32217af255e76e6fb5afa346337811
ToppCellLPS-IL1RA+antiTNF-Myeloid|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CSF3R LYN NAIP

3.21e-041873234e0bbef6ba0d1b3e1f8d900d4a9dbd41f09a7bc5
ToppCell5'-GW_trimst-2-LymphNode-Hematopoietic-Myeloid-Monocytes|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R LYN ARPC1B

3.26e-04188323085b61dfad373e5c39f2496539fbfed1b588115a
ToppCellPBMC-Severe-Myeloid-Neutrophil-Neutrophil-Neu_1|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

CSF3R LYN NAIP

3.26e-04188323aa46073e2940dc1d2020b2e259bf0fc06cb990ee
ToppCellPBMC-Severe-Myeloid-Neutrophil-Neutrophil-Neu_1|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

CSF3R LYN NAIP

3.26e-0418832304814b78da936a51a497e23060d19ca0d619e250
ToppCellfacs-Large_Intestine-Distal-3m-Epithelial-Lgr5+_undifferentiated_cell_(Distal)|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GGH TINAG WLS

3.26e-041883235b69de5baaac45a6d4daa1dbfcb70a7b2ae744ac
ToppCell10x_3'_v3-lymph_node_(10x_3'_v3)-myeloid-myeloid_dendritic-CD1c-positive_myeloid_dendritic_cell|lymph_node_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CSF3R FGD4 NAIP

3.31e-04189323e4b2f00cb3675a4d94e8807d6ff99cc55f9ed233
ToppCellIPF-Myeloid-cMonocyte|Myeloid / Disease state, Lineage and Cell class

EXT1 CSF3R NAIP

3.31e-04189323ad7bb3a7de8e48c145e4382f90d30bb2159c2b76
ToppCellCOPD-Myeloid-cMonocyte|Myeloid / Disease state, Lineage and Cell class

EXT1 CSF3R NAIP

3.31e-041893236294691231c7d38707323cf31578a107d3b2c622
ToppCellFetal_29-31_weeks-Immune-monocyte-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

CSF3R LYN NAIP

3.36e-04190323ad297172a74a80ed5c10f921e15efd1da0fd2d6b
ToppCellIPF-Myeloid-cMonocyte|World / Disease state, Lineage and Cell class

CSF3R FGD4 NAIP

3.36e-04190323ffa890138394f579fee53fcfac6c121bf86adc26
ToppCellChildren_(3_yrs)-Immune-interstitial_macrophage_(C1Q_positive)|Children_(3_yrs) / Lineage, Cell type, age group and donor

MGAT5 WLS NAIP

3.36e-04190323f573fef3762a30c38cf8fa7f45df0ffbb49dc873
ToppCellIPF-Myeloid-cMonocyte|IPF / Disease state, Lineage and Cell class

CSF3R FGD4 NAIP

3.36e-04190323a099f51f2b7618b6712af38eedd5ee64d8663a4a
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Thick_Ascending_Limb_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

WLS FGD4 PHACTR4

3.41e-041913239032aa974aa1b7b1095b8d1b58dcb087358a5001
ToppCell5'-GW_trimst-2-LymphNode-Hematopoietic-Myeloid-cDC2|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CSF3R LYN ARPC1B

3.41e-04191323a898153490fb9e8c4331c5dce63dbfb5185bccf2
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

WLS FGD4 PHACTR4

3.41e-041913235717809a1476c20f65bce722c5a57cff92ee0d7a
ToppCell10x_3'_v2v3-Non-neoplastic-Myeloid-TAM-MG-TAM-MG_aging_sig-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

LYN ARPC1B NCK2

3.41e-04191323b5715eeb72a97b7bc87b83f6c289e225f58da842
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Immune-Myeloid-Monocytic-Non-classical_Monocyte|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

CSF3R LYN NAIP

3.41e-0419132347a2afc4102199b4bc76bd01b2967c8016186462
DrugNomegestrol acetate [58652-20-3]; Up 200; 10.8uM; MCF7; HT_HG-U133A

TMPRSS2 EXT1 MGAT5 WLS NDST2

6.36e-061963155461_UP
DrugPinacidil [85371-64-8]; Up 200; 16.4uM; MCF7; HT_HG-U133A

TMPRSS2 EXT1 PHF20 WLS DYNC2H1

6.69e-061983157437_UP
DrugNSC-725021

BIRC8 NAIP

2.68e-056312CID000406741
Diseaseazoospermia (implicated_via_orthology)

NDST4 NDST2

3.45e-0427302DOID:14227 (implicated_via_orthology)
Diseasemyelodysplastic syndrome (is_implicated_in)

CSF3R ARPC1B

4.27e-0430302DOID:0050908 (is_implicated_in)
Diseaseautism spectrum disorder (implicated_via_orthology)

NDST4 EXT1 NDST2

4.91e-04152303DOID:0060041 (implicated_via_orthology)
Diseaseresponse to opioid

MGAT5 ADAMTSL2

1.76e-0361302EFO_0008541
Diseaseoral squamous cell carcinoma (is_marker_for)

ARPC1B NAIP

1.88e-0363302DOID:0050866 (is_marker_for)

Protein segments in the cluster

PeptideGeneStartEntry
DDPWKEHAKWFPKCE

NAIP

211

Q13075
IQVKPTCKPSWQGWN

CLSTN3

236

Q9BQT9
EQENDWWVCKHIKKP

ARPC1B

126

O15143
PLQGQLWHHWCKKDK

GVINP1

1271

Q7Z2Y8
VHCWWDCKLVQPLWK

nan

1141

O00370
EKPENDPEWWKCKNA

NCK2

226

O43639
EVENWCPHLPWRAKN

MGAT5

191

Q09328
SKPWQKAWCVIPKQD

FGD4

656

Q96M96
DKNCPAHWLAQDWER

ADAMTSL2

791

Q86TH1
LWQNPCDDKRHKDIW

NDST4

571

Q9H3R1
WPCKSKEEWNEIRHQ

PHACTR4

566

Q8IZ21
QKCPLAWQSKWEGPE

DYNC2H1

4121

Q8NCM8
LWNCDKPLPAKHRWP

EXT1

516

Q16394
LANWKPKEDPWEQHA

BIRC8

46

Q96P09
VQWHPEKAPYEWKNL

GGH

241

Q92820
VPIAKKWCANPDWIH

G6PC2

236

Q9NQR9
LCWEPWQPGLHINQK

CSF3R

251

Q99062
CISPKPQKPWDKDAW

LYN

226

P07948
QVKHWPSEQDPEKAW

PRAP1

31

Q96NZ9
HPDLPLWCQPWKQHS

PHF20

771

Q9BVI0
QPFHLNWAWICLEKE

FREM3

1766

P0C091
DVWQGLRHQPWKQLC

GDF6

216

Q6KF10
QWCNVVRWEFKHPQP

EPRS1

1146

P07814
ELEEAHQKCPPWWYK

SCN4A

536

P35499
IVPKWHEKPYEWNQV

TDRD9

1336

Q8NDG6
KEVCHPEQANLKWPW

PKDREJ

396

Q9NTG1
TNDICWAKVWPDLPN

SI

1326

P14410
PVPVNWKCPWCKAIN

TEX13D

676

A0A0J9YY54
HCVEKPLNNPWHWTA

TMPRSS2

296

O15393
WQNPCDDKRHKDIWS

NDST2

581

P52849
EQQEWKIPPCISNWK

SNW1

241

Q13573
KWFVPWGPNHCDKIR

WLS

61

Q5T9L3
KWPGWTHGPLDQKNC

TINAG

226

Q9UJW2