Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	histone binding	TSPY3 NAP1L3 TSPY2 CHD3 TSPY8 TSPY1 KMT2E TSPY10 CHD6 DEK	2.45e-05	265	145	10	GO:0042393
GeneOntologyMolecularFunction	chromatin binding	CHAF1A TSPY3 NAP1L3 NSD1 TSPY2 CHD3 TSPY8 TSPY1 CIC PPARGC1A CTCF PKNOX1 TSPY10 MRNIP CHD6 DMRT1 NOTCH1	2.69e-05	739	145	17	GO:0003682
GeneOntologyMolecularFunction	histone H3 methyltransferase activity	SETD1B NSD1 KMT2E KMT2C	2.89e-04	44	145	4	GO:0140938
GeneOntologyMolecularFunction	DNA topoisomerase type I (single strand cut, ATP-independent) activity	TOP3B TOP3A	3.11e-04	4	145	2	GO:0003917
GeneOntologyBiologicalProcess	gonadal mesoderm development	TSPY3 TSPY2 TSPY8 TSPY1 TSPY10	2.04e-09	9	146	5	GO:0007506
GeneOntologyBiologicalProcess	chromatin remodeling	SETD1B CHAF1A TSPY3 NAP1L3 NSD1 TSPY2 CHD3 TSPY8 TSPY1 KMT2E KMT2C ZNF827 CTCF BRPF1 TSPY10 CHD6 GNAS DEK HDGF	1.26e-06	741	146	19	GO:0006338
GeneOntologyBiologicalProcess	chromatin organization	SETD1B CHAF1A TSPY3 NAP1L3 NSD1 TSPY2 RNF40 CHD3 TSPY8 TSPY1 KMT2E KMT2C ZNF827 CTCF BRPF1 TSPY10 CHD6 GNAS DEK TADA3 HDGF	1.40e-06	896	146	21	GO:0006325
GeneOntologyBiologicalProcess	protein-DNA complex organization	SETD1B CHAF1A TSPY3 NAP1L3 NSD1 TSPY2 RNF40 CHD3 TSPY8 TSPY1 KMT2E KMT2C ZNF827 CTCF BRPF1 TSPY10 CHD6 GNAS DEK TADA3 HDGF	7.62e-06	999	146	21	GO:0071824
GeneOntologyBiologicalProcess	nucleosome assembly	CHAF1A TSPY3 NAP1L3 TSPY2 TSPY8 TSPY1 TSPY10	2.62e-05	122	146	7	GO:0006334
GeneOntologyBiologicalProcess	nucleosome organization	CHAF1A TSPY3 NAP1L3 TSPY2 TSPY8 TSPY1 TSPY10	6.91e-05	142	146	7	GO:0034728
GeneOntologyCellularComponent	chromatin	SRSF2 FLYWCH1 ICE2 CHAF1A TSPY3 NAP1L3 NSD1 TSPY2 RNF40 CHD3 ZFPM1 TSPY8 TSPY1 RFX8 KMT2E RFX5 CIC NUFIP1 ZBTB37 PPARGC1A ARNT ZNF827 BRPF1 ARNT2 PKNOX1 TSPY10 TGIF2LX CHD6 DMRT1 DEK TADA3 KIF22	7.37e-09	1480	146	32	GO:0000785
Domain	NAP_family	NAP1L3 TSPY2 TSPY8 TSPY10	6.86e-06	17	141	4	IPR002164
Domain	NAP	NAP1L3 TSPY2 TSPY8 TSPY10	6.86e-06	17	141	4	PF00956
Domain	Topo_IA_2	TOP3B TOP3A	5.66e-05	2	141	2	IPR003601
Domain	Cell_morpho_N	FRYL FRY	5.66e-05	2	141	2	IPR025614
Domain	Topo_IA_DNA-bd_dom	TOP3B TOP3A	5.66e-05	2	141	2	IPR003602
Domain	-	TOP3B TOP3A	5.66e-05	2	141	2	2.70.20.10
Domain	Topo_IA_core_domain	TOP3B TOP3A	5.66e-05	2	141	2	IPR023405
Domain	Topo_IA_AS	TOP3B TOP3A	5.66e-05	2	141	2	IPR023406
Domain	Topo_IA_cen_sub1	TOP3B TOP3A	5.66e-05	2	141	2	IPR013824
Domain	FLYWCH_N	FLYWCH1 FLYWCH2	5.66e-05	2	141	2	PF15423
Domain	Cell_Morphogen_C	FRYL FRY	5.66e-05	2	141	2	IPR025481
Domain	Topo_IA_cen	TOP3B TOP3A	5.66e-05	2	141	2	IPR013497
Domain	-	TOP3B TOP3A	5.66e-05	2	141	2	3.40.50.140
Domain	Topo_IA	TOP3B TOP3A	5.66e-05	2	141	2	IPR000380
Domain	TOP1Bc	TOP3B TOP3A	5.66e-05	2	141	2	SM00436
Domain	TOP1Ac	TOP3B TOP3A	5.66e-05	2	141	2	SM00437
Domain	-	TOP3B TOP3A	5.66e-05	2	141	2	1.10.460.10
Domain	FLYWCH_N	FLYWCH1 FLYWCH2	5.66e-05	2	141	2	IPR029279
Domain	MOR2-PAG1_mid	FRYL FRY	5.66e-05	2	141	2	IPR029473
Domain	MOR2-PAG1_mid	FRYL FRY	5.66e-05	2	141	2	PF14228
Domain	MOR2-PAG1_C	FRYL FRY	5.66e-05	2	141	2	PF14225
Domain	MOR2-PAG1_N	FRYL FRY	5.66e-05	2	141	2	PF14222
Domain	Topoisom_bac	TOP3B TOP3A	5.66e-05	2	141	2	PF01131
Domain	TOPOISOMERASE_I_PROK	TOP3B TOP3A	5.66e-05	2	141	2	PS00396
Domain	TOPRIM	TOP3B TOP3A	5.66e-05	2	141	2	SM00493
Domain	Topo_IA_cen_sub2	TOP3B TOP3A	1.69e-04	3	141	2	IPR013825
Domain	Post-SET_dom	SETD1B NSD1 KMT2C	2.19e-04	16	141	3	IPR003616
Domain	PostSET	SETD1B NSD1 KMT2C	2.19e-04	16	141	3	SM00508
Domain	POST_SET	SETD1B NSD1 KMT2C	2.19e-04	16	141	3	PS50868
Domain	SET	SETD1B NSD1 KMT2E KMT2C	2.54e-04	41	141	4	PF00856
Domain	Znf_PHD-finger	NSD1 CHD3 KMT2E KMT2C BRPF1	3.29e-04	79	141	5	IPR019787
Domain	Toprim	TOP3B TOP3A	3.36e-04	4	141	2	PF01751
Domain	Toprim_domain	TOP3B TOP3A	3.36e-04	4	141	2	IPR006171
Domain	TF_AF4/FMR2	AFF2 AFF3	3.36e-04	4	141	2	IPR007797
Domain	TOPRIM	TOP3B TOP3A	3.36e-04	4	141	2	PS50880
Domain	AF-4	AFF2 AFF3	3.36e-04	4	141	2	PF05110
Domain	SET	SETD1B NSD1 KMT2E KMT2C	3.97e-04	46	141	4	SM00317
Domain	PWWP	NSD1 BRPF1 HDGF	4.37e-04	20	141	3	SM00293
Domain	SET_dom	SETD1B NSD1 KMT2E KMT2C	5.48e-04	50	141	4	IPR001214
Domain	SET	SETD1B NSD1 KMT2E KMT2C	5.48e-04	50	141	4	PS50280
Domain	PHD	NSD1 CHD3 KMT2E KMT2C BRPF1	5.70e-04	89	141	5	SM00249
Domain	Znf_PHD	NSD1 CHD3 KMT2E KMT2C BRPF1	6.31e-04	91	141	5	IPR001965
Domain	PWWP	NSD1 BRPF1 HDGF	6.68e-04	23	141	3	PF00855
Domain	PWWP_dom	NSD1 BRPF1 HDGF	6.68e-04	23	141	3	IPR000313
Domain	PWWP	NSD1 BRPF1 HDGF	7.59e-04	24	141	3	PS50812
Domain	ZF_PHD_2	NSD1 CHD3 KMT2E KMT2C BRPF1	7.68e-04	95	141	5	PS50016
Domain	ZINC_FINGER_C2H2_1	ZBTB4 ZFPM1 ZNF414 ZNF691 ZNF440 NUFIP1 ZBTB37 ZNF469 WIZ ZNF827 CTCF ZNF358 BRPF1 CIZ1 ZNF264	7.94e-04	777	141	15	PS00028
Domain	ZF_PHD_1	NSD1 CHD3 KMT2E KMT2C BRPF1	8.05e-04	96	141	5	PS01359
Domain	Znf_FYVE_PHD	ZBTB4 NSD1 CHD3 KMT2E KMT2C BRPF1	8.80e-04	147	141	6	IPR011011
Domain	Znf_C2H2-like	ZBTB4 ZFPM1 ZNF414 ZNF691 ZNF440 NUFIP1 ZBTB37 ZNF469 WIZ ZNF827 CTCF ZNF358 BRPF1 CIZ1 ZNF264	1.01e-03	796	141	15	IPR015880
Domain	Znf_C2H2	ZBTB4 ZFPM1 ZNF414 ZNF691 ZNF440 NUFIP1 ZBTB37 ZNF469 WIZ ZNF827 CTCF ZNF358 BRPF1 CIZ1 ZNF264	1.13e-03	805	141	15	IPR007087
Domain	Hlx-hairpin-Hlx_DNA-bd_motif	MUS81 KIF22	1.16e-03	7	141	2	IPR003583
Domain	HhH1	MUS81 KIF22	1.16e-03	7	141	2	SM00278
Domain	ZnF_C2H2	ZBTB4 ZFPM1 ZNF414 ZNF691 ZNF440 NUFIP1 ZBTB37 ZNF469 WIZ ZNF827 CTCF ZNF358 BRPF1 CIZ1 ZNF264	1.18e-03	808	141	15	SM00355
Domain	C1	STAC3 KMT2C AKAP13 PRKCZ	1.48e-03	65	141	4	SM00109
Domain	Zinc_finger_PHD-type_CS	NSD1 CHD3 KMT2E BRPF1	1.48e-03	65	141	4	IPR019786
Domain	Nuc_translocat	ARNT ARNT2	1.54e-03	8	141	2	IPR001067
Domain	PE/DAG-bd	STAC3 KMT2C AKAP13 PRKCZ	1.56e-03	66	141	4	IPR002219
Domain	RuvA_2-like	SRBD1 KIF22	1.97e-03	9	141	2	IPR010994
Domain	RFX_DNA_binding	RFX8 RFX5	1.97e-03	9	141	2	PF02257
Domain	DNA-bd_RFX	RFX8 RFX5	1.97e-03	9	141	2	IPR003150
Domain	RFX_DBD	RFX8 RFX5	1.97e-03	9	141	2	PS51526
Domain	ZINC_FINGER_C2H2_2	ZBTB4 ZFPM1 ZNF414 ZNF691 ZNF440 NUFIP1 ZBTB37 ZNF469 WIZ ZNF827 CTCF ZNF358 BRPF1 ZNF264	2.21e-03	775	141	14	PS50157
Domain	PHD	NSD1 CHD3 KMT2E KMT2C	2.50e-03	75	141	4	PF00628
Domain	EGF	VCAN NCAN LRP2 TNXB NOTCH1	2.69e-03	126	141	5	PF00008
Domain	Link_dom	VCAN NCAN	4.18e-03	13	141	2	IPR000538
Domain	Xlink	VCAN NCAN	4.18e-03	13	141	2	PF00193
Domain	LINK_2	VCAN NCAN	4.18e-03	13	141	2	PS50963
Domain	LINK	VCAN NCAN	4.18e-03	13	141	2	SM00445
Domain	LINK_1	VCAN NCAN	4.18e-03	13	141	2	PS01241
Domain	LY	LRP2 ROS1	5.57e-03	15	141	2	SM00135
Domain	LDLR_classB_rpt	LRP2 ROS1	5.57e-03	15	141	2	IPR000033
Domain	EGF_Ca-bd_CS	VCAN NCAN LRP2 NOTCH1	6.27e-03	97	141	4	IPR018097
Domain	zf-C2H2	ZBTB4 ZFPM1 ZNF414 ZNF691 ZNF440 NUFIP1 ZBTB37 ZNF469 ZNF827 CTCF ZNF358 ZNF264	6.32e-03	693	141	12	PF00096
Domain	EGF_CA	VCAN NCAN LRP2 NOTCH1	6.74e-03	99	141	4	PS01187
Domain	ASX_HYDROXYL	VCAN NCAN LRP2 NOTCH1	6.98e-03	100	141	4	PS00010
Domain	Homeobox_KN	PKNOX1 TGIF2LX	7.15e-03	17	141	2	PF05920
Domain	Homeobox_KN_domain	PKNOX1 TGIF2LX	7.15e-03	17	141	2	IPR008422
Pubmed	A dual-activity topoisomerase complex regulates mRNA translation and turnover.	SETD1B ZBTB4 NSD1 MUS81 C15orf39 RNF40 FRYL ZFPM1 DENND1A CIC KMT2C WIZ ADAMTS7 ZNF827 PLEKHO2 PPP1R15B EIF4G1 AKAP13 ULK1 HERC1 TOP3B NOTCH1 WNK2 TOP3A SYMPK	8.92e-12	1105	148	25	35748872
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	SRSF2 FLYWCH1 CHAF1A CKAP5 NSD1 MUS81 RNF40 CHD3 SRBD1 RFX5 CIC KMT2C ARNT PAXBP1 WIZ CTCF CCNB2 CIZ1 CHD6 DEK TADA3 TOP3A KIF22 SYMPK	1.33e-09	1294	148	24	30804502
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	PRUNE2 MIA3 LIMD1 AFF3 CHD3 FRYL DENND1A ZNF440 PLEKHH1 KLHL29 KMT2C ASAP2 PTPRN2 ZNF827 MICAL2 PLEKHG3 SAMD13 AKAP13 CHD6 PRKCZ GNAS WNK2	3.68e-07	1489	148	22	28611215
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	FLYWCH1 CHAF1A NSD1 CHD3 SRBD1 RFX5 CIC WIZ BRPF1 CIZ1 CHD6 DEK KIF22 HDGF	3.69e-07	608	148	14	36089195
Pubmed	Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.	LIMD1 CHD3 RFX5 CIC NUFIP1 ZBTB37 ARNT WIZ CTCF BRPF1 ARNT2 CIZ1 PKNOX1 DMRT1 DEK	2.05e-06	808	148	15	20412781
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	MIA3 CKAP5 NSD1 RTN1 ITIH1 FRY WIZ KIF15 CAMKV PTPRN2 CTCF SRGAP3 NCAN EIF4G1 TOP3B WNK2	3.81e-06	963	148	16	28671696
Pubmed	Skirting the pitfalls: a clear-cut nomenclature for H3K4 methyltransferases.	SETD1B KMT2E KMT2C	4.16e-06	8	148	3	23130995
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	DLG5 SRSF2 FLYWCH1 RGS19 CHAF1A CKAP5 NSD1 SRBD1 DENND1A CIC KMT2C PAXBP1 WIZ CTCF PLEKHG3 EIF4G1 CIZ1 CHD6 TADA3 KIF22	5.98e-06	1497	148	20	31527615
Pubmed	Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets.	C15orf39 ZFPM1 KMT2E ZNF440 PLEKHH1 KMT2C ANO7 WNK2	7.57e-06	233	148	8	37704626
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	ATP6V0A1 DIS3L ZBTB4 CKAP5 NAP1L3 RNF40 SEC31B RFX5 NDUFB7 NUFIP1 PLEKHH1 FRY WIZ MICAL2 EIF4G1 PKNOX1 LRP2 CHD6	9.65e-06	1285	148	18	35914814
Pubmed	Zinc transporter Slc39a8 is essential for cardiac ventricular compaction.	ADAMTS7 VCAN NOTCH1	1.22e-05	11	148	3	29337306
Pubmed	Systematic identification of SH3 domain-mediated human protein-protein interactions by peptide array target screening.	AFF2 CHAF1A CKAP5 PCDHA2 ASAP2 PTPRN2 LRP2 WNK2 KIF22	1.26e-05	329	148	9	17474147
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	CKAP5 C15orf39 RNF40 CHD3 CIC WIZ KIF15 PPM1F LRP2 CHD6	1.32e-05	418	148	10	34709266
Pubmed	Gαs regulates asymmetric cell division of cortical progenitors by controlling Numb mediated Notch signaling suppression.	PRKCZ GNAS NOTCH1	1.62e-05	12	148	3	25916881
Pubmed	E3 ubiquitin ligase RNF123 targets lamin B1 and lamin-binding proteins.	MXRA5 C16orf90 CKAP5 KMT2C FRY WIZ PTPRN2 SRGAP3 PLXNA4 LRP2 AKAP13 CHD6 SYMPK	1.71e-05	736	148	13	29676528
Pubmed	Divergent expression patterns for hypoxia-inducible factor-1beta and aryl hydrocarbon receptor nuclear transporter-2 in developing kidney.	ARNT ARNT2	1.80e-05	2	148	2	15466261
Pubmed	Differentiation in neuroblastoma: diffusion-limited hypoxia induces neuro-endocrine secretory protein 55 and other markers of a chromaffin phenotype.	CHGA GNAS	1.80e-05	2	148	2	20862257
Pubmed	Tumor-produced versican V1 enhances hCAP18/LL-37 expression in macrophages through activation of TLR2 and vitamin D3 signaling to promote ovarian cancer progression in vitro.	CAMP VCAN	1.80e-05	2	148	2	23424670
Pubmed	Cdc2-mediated phosphorylation of Kid controls its distribution to spindle and chromosomes.	CCNB2 KIF22	1.80e-05	2	148	2	12727876
Pubmed	Prep1 regulates angiogenesis through a PGC-1α-mediated mechanism.	PPARGC1A PKNOX1	1.80e-05	2	148	2	31618597
Pubmed	PGC-1α Protects from Notch-Induced Kidney Fibrosis Development.	PPARGC1A NOTCH1	1.80e-05	2	148	2	28751525
Pubmed	The human DEK oncogene regulates DNA damage response signaling and repair.	SRSF2 DEK	1.80e-05	2	148	2	21653549
Pubmed	Unique and overlapping transcriptional roles of arylhydrocarbon receptor nuclear translocator (Arnt) and Arnt2 in xenobiotic and hypoxic responses.	ARNT ARNT2	1.80e-05	2	148	2	17023418
Pubmed	Systematic comparison of gene expression between murine memory and naive B cells demonstrates that memory B cells have unique signaling capabilities.	LIFR PRKCZ	1.80e-05	2	148	2	18566367
Pubmed	CHD6 is a DNA-dependent ATPase and localizes at nuclear sites of mRNA synthesis.	CHD3 CHD6	1.80e-05	2	148	2	17027977
Pubmed	The mouse Laf4 gene: exon/intron organization, cDNA sequence, alternative splicing, and expression during central nervous system development.	AFF2 AFF3	1.80e-05	2	148	2	12079280
Pubmed	Neuropeptide Y is a physiological substrate of fibroblast activation protein: Enzyme kinetics in blood plasma and expression of Y2R and Y5R in human liver cirrhosis and hepatocellular carcinoma.	FAP NPY	1.80e-05	2	148	2	26621486
Pubmed	DEK-AFF2 Carcinoma of the Sinonasal Region and Skull Base: Detailed Clinicopathologic Characterization of a Distinctive Entity.	AFF2 DEK	1.80e-05	2	148	2	34049316
Pubmed	A common genetic variant in the 3'-UTR of vacuolar H+-ATPase ATP6V0A1 creates a micro-RNA motif to alter chromogranin A processing and hypertension risk.	ATP6V0A1 CHGA	1.80e-05	2	148	2	21558123
Pubmed	Human transcription factor protein interaction networks.	LIMD1 DIS3L MRPL10 C15orf39 CHD3 RFX5 CIC ZNF691 KMT2C ARNT WIZ CTCF EIF4G1 LRP2 CHD6 HERC1 TADA3 SYMPK	3.93e-05	1429	148	18	35140242
Pubmed	Special characteristics of the transcription and splicing machinery in photoreceptor cells of the mammalian retina.	SRSF2 AFF2	5.38e-05	3	148	2	26013685
Pubmed	Identification of oral squamous cell carcinoma markers MUC2 and SPRR1B downstream of TANGO.	ARNT MUC20	5.38e-05	3	148	2	33620575
Pubmed	The adult stem cell marker Musashi-1 modulates endometrial carcinoma cell cycle progression and apoptosis via Notch-1 and p21WAF1/CIP1.	MSI1 NOTCH1	5.38e-05	3	148	2	21165952
Pubmed	cDNA cloning and tissue-specific expression of a novel basic helix-loop-helix/PAS factor (Arnt2) with close sequence similarity to the aryl hydrocarbon receptor nuclear translocator (Arnt).	ARNT ARNT2	5.38e-05	3	148	2	8657146
Pubmed	Analysis of Ah receptor-ARNT and Ah receptor-ARNT2 complexes in vitro and in cell culture.	ARNT ARNT2	5.38e-05	3	148	2	18096572
Pubmed	Double-stranded RNA induces cathelicidin expression in the intestinal epithelial cells through phosphatidylinositol 3-kinase-protein kinase Cζ-Sp1 pathway and ameliorates shigellosis in mice.	CAMP PRKCZ	5.38e-05	3	148	2	28343946
Pubmed	Wiz binds active promoters and CTCF-binding sites and is required for normal behaviour in the mouse.	WIZ CTCF	5.38e-05	3	148	2	27410475
Pubmed	Structural basis of the interaction between Topoisomerase IIIβ and the TDRD3 auxiliary factor.	TOP3B TOP3A	5.38e-05	3	148	2	28176834
Pubmed	Decreased mitochondrial respiration in aneurysmal aortas of Fibulin-4 mutant mice is linked to PGC1A regulation.	MUS81 PPARGC1A	5.38e-05	3	148	2	29931197
Pubmed	Expression of Arnt and Arnt2 mRNA in developing murine tissues.	ARNT ARNT2	5.38e-05	3	148	2	12502753
Pubmed	BNIP2 extra long inhibits RhoA and cellular transformation by Lbc RhoGEF via its BCH domain.	PRUNE2 AKAP13	5.38e-05	3	148	2	18445682
Pubmed	Structures of NPAS4-ARNT and NPAS4-ARNT2 heterodimers reveal new dimerization modalities in the bHLH-PAS transcription factor family.	ARNT ARNT2	5.38e-05	3	148	2	36343253
Pubmed	Human RecQ5beta, a large isomer of RecQ5 DNA helicase, localizes in the nucleoplasm and interacts with topoisomerases 3alpha and 3beta.	TOP3B TOP3A	5.38e-05	3	148	2	10710432
Pubmed	Dynamic regulation of CTCF stability and sub-nuclear localization in response to stress.	SRSF2 CTCF	5.38e-05	3	148	2	33411704
Pubmed	Functional characterization of the AFF (AF4/FMR2) family of RNA-binding proteins: insights into the molecular pathology of FRAXE intellectual disability.	AFF2 AFF3	5.38e-05	3	148	2	21330300
Pubmed	TGF-β1 dominates stromal fibroblast-mediated EMT via the FAP/VCAN axis in bladder cancer cells.	FAP VCAN	5.38e-05	3	148	2	37461061
Pubmed	KIF15 upregulation promotes leiomyosarcoma cell growth via promoting USP15-mediated DEK deubiquitylation.	KIF15 DEK	5.38e-05	3	148	2	34280614
Pubmed	A SNAI2/CTCF Interaction is Required for NOTCH1 Expression in Rhabdomyosarcoma.	CTCF NOTCH1	5.38e-05	3	148	2	37882064
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	SRSF2 CHAF1A NSD1 CHD3 RFX5 CIC PAXBP1 WIZ CTCF EIF4G1 CIZ1 DEK TADA3 SYMPK	6.10e-05	954	148	14	36373674
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	FAM184B MIA3 FLYWCH1 MRPL10 NSD1 CHD3 FRYL PPARGC1A KMT2C PAXBP1 VCAN LRP2 PRKCZ HERC1 SERTAD3	6.40e-05	1084	148	15	11544199
Pubmed	Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.	FLYWCH1 CHAF1A CKAP5 CIC ZBTB37 ARNT WIZ EIF4G1 DEK TOP3B NOTCH1 KIF22 SYMPK	8.12e-05	857	148	13	25609649
Pubmed	Human Immunodeficiency Virus Type 1 Vpr Mediates Degradation of APC1, a Scaffolding Component of the Anaphase-Promoting Complex/Cyclosome.	DLG5 NSD1 CIC CTCF GNAS TOP3B SYMPK	8.42e-05	242	148	7	34011540
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	DIS3L CHAF1A CHD3 MSI1 NUFIP1 ZNF469 WIZ ZNF827 CTCF BRPF1 RTL9 CAPRIN2 CIZ1 LRP2 TADA3	8.84e-05	1116	148	15	31753913
Pubmed	Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.	MIA3 SRSF2 CHAF1A C15orf39 RNF40 RFX5 CIC WIZ HDGF	9.18e-05	425	148	9	24999758
Pubmed	Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.	PRUNE2 AFF2 KMT2E CIC ZNF469 ASAP2 AKAP13 NOTCH1 WNK2	1.00e-04	430	148	9	35044719
Pubmed	An atlas of combinatorial transcriptional regulation in mouse and man.	CHAF1A RFX5 CIC ZNF440 PPARGC1A ARNT BRPF1 ARNT2 PKNOX1 TGIF2LX DMRT1 DEK HDGF	1.02e-04	877	148	13	20211142
Pubmed	New nomenclature for chromatin-modifying enzymes.	SETD1B NSD1 KMT2E KMT2C	1.04e-04	57	148	4	18022353
Pubmed	Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.	DLG5 FLYWCH2 CHAF1A CKAP5 MUS81 SRBD1 RFX5 CIZ1 CHD6 KIF22 HDGF	1.06e-04	645	148	11	25281560
Pubmed	The acute myeloid leukemia-associated protein, DEK, forms a splicing-dependent interaction with exon-product complexes.	SRSF2 DEK	1.07e-04	4	148	2	10908574
Pubmed	Neural RNA-binding protein Musashi1 inhibits translation initiation by competing with eIF4G for PABP.	MSI1 EIF4G1	1.07e-04	4	148	2	18490513
Pubmed	Loss of FMR2 further emphasizes the link between deregulation of immediate early response genes FOS and JUN and intellectual disability.	SRSF2 AFF2	1.07e-04	4	148	2	23562910
Pubmed	Impaired conditioned fear and enhanced long-term potentiation in Fmr2 knock-out mice.	AFF2 AFF3	1.07e-04	4	148	2	11923441
Pubmed	Lecticans: organizers of the brain extracellular matrix.	VCAN NCAN	1.07e-04	4	148	2	10766023
Pubmed	Altered gene expression pattern in the fatty liver dystrophy mouse reveals impaired insulin-mediated cytoskeleton dynamics.	CEL ARNT LRP2	1.10e-04	22	148	3	10438476
Pubmed	Structural basis for activity regulation of MLL family methyltransferases.	SETD1B KMT2E KMT2C	1.10e-04	22	148	3	26886794
Pubmed	Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.	AFF3 SRBD1 KLHL29 ZBTB37 KMT2C ZNF827 NPY	1.48e-04	265	148	7	19240061
Pubmed	Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.	MIA3 SNX19 CIC WIZ KIF15 PTPRN2 CCNB2 PPM1F HERC1 DEK TOP3B NOTCH1 KIF22 SYMPK	1.65e-04	1049	148	14	27880917
Pubmed	Disabled-1 acts downstream of Reelin in a signaling pathway that controls laminar organization in the mammalian brain.	VCAN NCAN	1.78e-04	5	148	2	9716537
Pubmed	Activation of the rat renin promoter by HOXD10.PBX1b.PREP1, Ets-1, and the intracellular domain of notch.	PKNOX1 NOTCH1	1.78e-04	5	148	2	15792957
Pubmed	Nrf2 Transcriptional Activity Governs Intestine Development.	CHGA NOTCH1	1.78e-04	5	148	2	35682851
Pubmed	TSPY and its X-encoded homologue interact with cyclin B but exert contrasting functions on cyclin-dependent kinase 1 activities.	TSPY1 CCNB2	1.78e-04	5	148	2	18591933
Pubmed	Expression of ARNT, ARNT2, HIF1 alpha, HIF2 alpha and Ah receptor mRNAs in the developing mouse.	ARNT ARNT2	1.78e-04	5	148	2	9545558
Pubmed	HIF-independent regulation of VEGF and angiogenesis by the transcriptional coactivator PGC-1alpha.	PPARGC1A ARNT	1.78e-04	5	148	2	18288196
Pubmed	The LIM protein, Limd1, regulates AP-1 activation through an interaction with Traf6 to influence osteoclast development.	LIMD1 PRKCZ	1.78e-04	5	148	2	17092936
Pubmed	Global analysis of host-pathogen interactions that regulate early-stage HIV-1 replication.	SETD1B CHAF1A MRPL10 MUS81 PTPRN2 AKAP13 TOP3B	2.21e-04	283	148	7	18854154
Pubmed	Transcriptome characterization elucidates signaling networks that control human ES cell growth and differentiation.	FLYWCH1 ICE2 AFF3 NSD1 SNX19 PLEKHG3 VCAN NCAN PKNOX1 MRNIP GNAS DEK TOP3B NOTCH1 HDGF	2.23e-04	1215	148	15	15146197
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	DLG5 SETD1B C15orf39 RNF40 CIC ARNT KIF15 CCNB2 GNAS TOP3A	2.24e-04	588	148	10	38580884
Pubmed	A human MAP kinase interactome.	CHAF1A CIC ZNF440 KMT2C ASAP2 AKAP13 CHD6 PRKCZ WNK2	2.49e-04	486	148	9	20936779
Pubmed	Isolation and characterization of AINT: a novel ARNT interacting protein expressed during murine embryonic development.	ARNT ARNT2	2.67e-04	6	148	2	11025203
Pubmed	New loci associated with central cornea thickness include COL5A1, AKAP13 and AVGR8.	ZNF469 AKAP13	2.67e-04	6	148	2	20719862
Pubmed	Separate necdin domains bind ARNT2 and HIF1alpha and repress transcription.	ARNT ARNT2	2.67e-04	6	148	2	17826745
Pubmed	The LIM protein Ajuba influences interleukin-1-induced NF-kappaB activation by affecting the assembly and activity of the protein kinase Czeta/p62/TRAF6 signaling complex.	LIMD1 PRKCZ	2.67e-04	6	148	2	15870274
Pubmed	Two new members of the murine Sim gene family are transcriptional repressors and show different expression patterns during mouse embryogenesis.	ARNT ARNT2	2.67e-04	6	148	2	8927054
Pubmed	Prostaglandin E2 promotes colon cancer cell growth through a Gs-axin-beta-catenin signaling axis.	RGS19 GNAS	2.67e-04	6	148	2	16293724
Pubmed	Voltage-dependent conformational changes of Kv1.3 channels activate cell proliferation.	AFF2 KMT2C ASAP2 CAPRIN2 LRP2 NLRP5	2.77e-04	208	148	6	33230847
Pubmed	A High-Density Map for Navigating the Human Polycomb Complexome.	SETD1B CHAF1A CHD3 KMT2C WIZ EIF4G1 SAMD13 DEK TADA3	2.85e-04	495	148	9	27705803
Pubmed	Proteomic analysis and identification of cellular interactors of the giant ubiquitin ligase HERC2.	MUS81 ARNT EIF4G1 GNAS HERC1	3.32e-04	139	148	5	25476789
Pubmed	A central chaperone-like role for 14-3-3 proteins in human cells.	DLG5 LIMD1 RASSF2 CKAP5 FRYL DENND1A CIC PLEKHG3 EIF4G1 AKAP13 GNAS TSSK1B	3.32e-04	861	148	12	36931259
Pubmed	Complementary quantitative proteomics reveals that transcription factor AP-4 mediates E-box-dependent complex formation for transcriptional repression of HDM2.	CKAP5 WIZ CTCF PKNOX1	3.35e-04	77	148	4	19505873
Pubmed	Semaphorin 3E/PlexinD1 signaling is required for cardiac ventricular compaction.	ADAMTS7 VCAN NOTCH1	3.42e-04	32	148	3	31434798
Pubmed	Gene expression in the developing mouse retina by EST sequencing and microarray analysis.	MRPL10 FRYL RFX8 WIZ DEK	3.66e-04	142	148	5	11812828
Pubmed	Identification of a novel basic helix-loop-helix-PAS factor, NXF, reveals a Sim2 competitive, positive regulatory role in dendritic-cytoskeleton modulator drebrin gene expression.	ARNT ARNT2	3.72e-04	7	148	2	14701734
Pubmed	MAGED1 is a novel regulator of a select subset of bHLH PAS transcription factors.	ARNT ARNT2	3.72e-04	7	148	2	27472814
Pubmed	Leukocyte common antigen-related phosphatase is a functional receptor for chondroitin sulfate proteoglycan axon growth inhibitors.	VCAN NCAN	3.72e-04	7	148	2	21976490
Pubmed	NPAS1-ARNT and NPAS3-ARNT crystal structures implicate the bHLH-PAS family as multi-ligand binding transcription factors.	ARNT ARNT2	3.72e-04	7	148	2	27782878
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	SETD1B CKAP5 SNX19 PLEKHH1 KLHL29 SRGAP3 CHD6 ULK1	3.72e-04	407	148	8	12693553
Pubmed	TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.	MXRA5 MRPL10 NAP1L3 SEC31B CIC PLEKHH1 PTPRN2 PPM1F CHD6 CDH17	4.26e-04	638	148	10	31182584
Pubmed	Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.	NSD1 CHD3 CIC WIZ	4.46e-04	83	148	4	28794006
Pubmed	Region-specific saturation germline mutagenesis in mice using the Sleeping Beauty transposon system.	AFF3 SMOC1	4.95e-04	8	148	2	16179923
Pubmed	The plasticity of WDR5 peptide-binding cleft enables the binding of the SET1 family of histone methyltransferases.	SETD1B KMT2C	4.95e-04	8	148	2	22266653
Interaction	TSPY8 interactions	TSPY3 TSPY2 TSPY8	3.88e-07	3	148	3	int:TSPY8
Interaction	H2BC8 interactions	SRSF2 FLYWCH2 CHAF1A NSD1 MUS81 CHD3 SRBD1 RFX5 WIZ CTCF BRPF1 CIZ1 CHD6 DEK TADA3 KIF22 HDGF	1.19e-06	576	148	17	int:H2BC8
Interaction	H3C3 interactions	FLYWCH1 CHAF1A NSD1 CHD3 SRBD1 RFX5 CIC WIZ BRPF1 CIZ1 CHD6 DEK KIF22 HDGF	1.77e-05	495	148	14	int:H3C3
Interaction	KDM1A interactions	DLG5 RASSF2 CHAF1A CKAP5 C15orf39 RNF40 CHD3 ZFPM1 CIC C4orf17 WIZ KIF15 SRGAP3 PLEKHG3 PPM1F LRP2 CHD6 TADA3 NOTCH1 SYMPK	1.87e-05	941	148	20	int:KDM1A
Interaction	FEV interactions	C15orf39 RFX5 CIC ZNF691 KMT2C ARNT WIZ CTCF CHD6	1.96e-05	203	148	9	int:FEV
Interaction	TOP3B interactions	SETD1B ZBTB4 NSD1 MUS81 C15orf39 RNF40 FRYL ZFPM1 DENND1A CIC KMT2C WIZ ADAMTS7 ZNF827 PLEKHO2 PPP1R15B EIF4G1 AKAP13 ULK1 GNAS HERC1 TOP3B NOTCH1 WNK2 TOP3A SYMPK	2.41e-05	1470	148	26	int:TOP3B
Interaction	SLX1A interactions	FLYWCH2 MUS81 ARNT TOP3A	4.30e-05	27	148	4	int:SLX1A
Interaction	TERF2IP interactions	CHAF1A NSD1 RNF40 CHD3 RFX5 ZNF414 CIC ARNT PAXBP1 WIZ CTCF PAFAH1B3 CIZ1 SYMPK	5.79e-05	552	148	14	int:TERF2IP
Interaction	MAPK14 interactions	SRSF2 FLYWCH2 CIC PPARGC1A KMT2C ARNT CIZ1 PRKCZ ULK1 KIF22 HDGF	6.15e-05	353	148	11	int:MAPK14
Cytoband	Ensembl 112 genes in cytogenetic band chr15q22	DIS3L ICE2 PLEKHO2 CCNB2 HERC1 SNX22	4.75e-06	132	148	6	chr15q22
Cytoband	Yp11.2	TSPY3 TSPY2 TSPY8 TSPY1 TSPY10	1.42e-05	94	148	5	Yp11.2
Cytoband	Ensembl 112 genes in cytogenetic band chrYp11	TSPY3 TSPY2 TSPY8 TSPY1 TSPY10	1.32e-04	150	148	5	chrYp11
GeneFamily	Zinc fingers C2H2-type\|Lysine methyltransferases\|PR/SET domain family	SETD1B NSD1 KMT2E KMT2C	4.04e-05	34	103	4	487
GeneFamily	PHD finger proteins	NSD1 CHD3 KMT2E KMT2C BRPF1	1.63e-04	90	103	5	88
GeneFamily	Hyalectan proteoglycans\|V-set domain containing\|Sushi domain containing\|C-type lectin domain containing	VCAN NCAN	1.91e-04	4	103	2	574
GeneFamily	AF4/FMR2 family\|Super elongation complex	AFF2 AFF3	1.91e-04	4	103	2	1145
GeneFamily	PWWP domain containing	NSD1 BRPF1 HDGF	2.56e-04	22	103	3	1147
GeneFamily	Topoisomerases	TOP3B TOP3A	4.75e-04	6	103	2	1050
GeneFamily	Zinc fingers C2H2-type\|ZF class homeoboxes and pseudogenes	ZBTB4 ZFPM1 ZNF414 ZNF691 ZNF440 ZBTB37 ZNF469 WIZ ZNF827 CTCF ZNF358 ZNF264	7.85e-04	718	103	12	28
GeneFamily	Granins	CHGA GNAS	8.80e-04	8	103	2	925
GeneFamily	Regulatory factor X family	RFX8 RFX5	8.80e-04	8	103	2	1153
GeneFamily	AF4/FMR2 family\|Super elongation complex	AFF2 AFF3	1.13e-03	9	103	2	1280
Coexpression	MANNO_MIDBRAIN_NEUROTYPES_HGABA	CCDC184 MIA3 AFF2 AFF3 NAP1L3 CHD3 CHGA KMT2E SEC31B RTN1 PPARGC1A FRY SRGAP3 VCAN NCAN ARNT2 CAPRIN2 PLXNA4 ZNF264 CACNA1G PRKCZ HERC1 HYDIN ARMH4	1.11e-08	1106	146	24	M39071
Coexpression	LINDGREN_BLADDER_CANCER_CLUSTER_3_DN	MXRA5 SEC31B RFX5 SNX19 PTPRN2 ZNF827 AKAP13 ROS1 NOTCH1	5.22e-06	226	146	9	M11238
Coexpression	GSE27241_WT_VS_RORGT_KO_TH17_POLARIZED_CD4_TCELL_TREATED_WITH_DIGOXIN_UP	CKAP5 FRYL ZBTB37 KMT2C KIF15 SRGAP3 ULK1 HERC1	7.96e-06	180	146	8	M8239
Coexpression	RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_DN	MIA3 NSD1 PLEKHH1 ZBTB37 LIFR FRY RIMKLB SAMD13 PKNOX1 AKAP13 GNAS HERC1 SNX22	1.14e-05	542	146	13	M19529
Coexpression	BLUM_RESPONSE_TO_SALIRASIB_DN	SRSF2 CHAF1A SPANXA1 RFX5 KIF15 CCNB2 PAFAH1B3 CHST12 DEK KIF22	2.26e-05	341	146	10	M2879
ToppCell	facs-Brain_Non-Myeloid-Cortex_-18m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 B3GNT7 SMOC1 RTN1 VCAN NCAN SNX22 ARMH4	1.84e-07	184	147	8	278a7ed764c326450cb70e69ed2175980eaf5fe0
ToppCell	facs-Brain_Non-Myeloid-Cortex_-18m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 B3GNT7 SMOC1 RTN1 VCAN NCAN SNX22 ARMH4	1.84e-07	184	147	8	8d86e125257ff1d3af8d90577a8b3f0321eca21c
ToppCell	Somatosensory_Cortex_(S1)-Non-neuronal-Macroglial-Oligo\|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	RASSF2 VWA1 SMOC1 PLEKHH1 PLEKHG3 VCAN LRP2 SNX22	2.17e-07	188	147	8	60242c29c7f16c94a84685d3bc4ed93a66e70152
ToppCell	normal_Lung-Fibroblasts-Myofibroblasts\|Fibroblasts / Location, Cell class and cell subclass	MXRA5 FAP ZNF469 MICAL2 VCAN RTL9 ARMH4	1.25e-06	164	147	7	9b4a6007abae992db871d9f6f731d5af724de30d
ToppCell	facs-Brain_Non-Myeloid-Striatum_-18m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 B3GNT7 RTN1 VCAN NCAN PAFAH1B3 SNX22	2.32e-06	180	147	7	fa819df81fca95c2cc602fede635cb03e3f35fad
ToppCell	facs-Brain_Non-Myeloid-Striatum_-18m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 B3GNT7 RTN1 VCAN NCAN PAFAH1B3 SNX22	2.32e-06	180	147	7	907cd510fd2e21532ce04ba687e8894f7af71f27
ToppCell	droplet-Lung-18m-Hematologic-myeloid-alveolar_macrophage-proliferating_alveolar_macrophage\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	PRUNE2 CHAF1A CKAP5 B3GNT7 KIF15 CCNB2 KIF22	2.59e-06	183	147	7	e91f00b75d43ee6293fdd4a129b789cd95f8d11a
ToppCell	Primary_Visual_cortex_(V1C)-Non-neuronal-Macroglial-Oligo\|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	RASSF2 VWA1 SMOC1 PLEKHH1 PLEKHG3 VCAN LRP2	2.68e-06	184	147	7	a2191dd5546efd357b23e625beb3c5820476f243
ToppCell	Primary_Visual_cortex_(V1C)-Non-neuronal-Macroglial\|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	RASSF2 VWA1 SMOC1 PLEKHH1 PLEKHG3 VCAN LRP2	2.99e-06	187	147	7	97e520705491c8f52a32025311a9fa7b9176979a
ToppCell	facs-Brain_Non-Myeloid-Striatum-3m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 CHGA SMOC1 VCAN NCAN SNX22 ARMH4	3.09e-06	188	147	7	7471c194276161422326647f09022e94f3d1640c
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Non-neuronal-Macroglial-Oligo\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	RASSF2 VWA1 SMOC1 PLEKHH1 PLEKHG3 VCAN SNX22	3.09e-06	188	147	7	d9692b6048d9b85524a07a1807bdd4757731c151
ToppCell	facs-Brain_Non-Myeloid-Striatum-3m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 CHGA SMOC1 VCAN NCAN SNX22 ARMH4	3.09e-06	188	147	7	053c251d3ddbeb866f34565aefca4535517b4387
ToppCell	facs-Pancreas-Endocrine-24m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 MIA3 SRSF2 CHGA PTPRN2 EIF4G1 AKAP13	3.09e-06	188	147	7	a91443aa8fa8fa87f7501c59219daa0305bd0bbf
ToppCell	facs-Brain_Non-Myeloid-Hippocampus_-18m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 B3GNT7 RTN1 VCAN NCAN SNX22 ARMH4	3.09e-06	188	147	7	006db2c2c44971ca9241c582bc89f258c785f5ed
ToppCell	facs-Brain_Non-Myeloid-Hippocampus_-18m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 B3GNT7 RTN1 VCAN NCAN SNX22 ARMH4	3.09e-06	188	147	7	d0e6fb4a3b3d79d3512b5500062ea285495ae526
ToppCell	Mid-temporal_gyrus_(MTG)-Non-neuronal-Macroglial-Oligo\|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	RASSF2 VWA1 SMOC1 PLEKHH1 PLEKHG3 LRP2 SNX22	3.43e-06	191	147	7	2110a1dd10730ad7ee7a265fb1716ab3ddafcf4a
ToppCell	facs-Brain_Non-Myeloid-Hippocampus-3m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 SMOC1 RTN1 VCAN NCAN SNX22 ARMH4	3.43e-06	191	147	7	ece87127f85939e61b1048d968ed96f0e87c3a79
ToppCell	facs-Brain_Non-Myeloid-Hippocampus-3m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 SMOC1 RTN1 VCAN NCAN SNX22 ARMH4	3.43e-06	191	147	7	478e8341ee03b05501e2233e02cef5f97492c95d
ToppCell	droplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MIA3 NSD1 FRYL CHGA KMT2C PTPRN2 HERC1	3.94e-06	195	147	7	3e519cffa6144a62b06124642a14c9ff39b76554
ToppCell	wk_08-11-Hematologic-Myeloid-Myelocyte-like\|wk_08-11 / Celltypes from embryonic and fetal-stage human lung	RGS19 CAMP ZBTB4 GPR84 SNX19 FRY ZNF264	4.07e-06	196	147	7	4b88c96b737a747422674ad99c073b28e6febc7c
ToppCell	Endothelial_cells-Endothelial-B\|Endothelial_cells / lung cells shred on cell class, cell subclass, sample id	B3GNT7 SMOC1 SRGAP3 MICAL2 PLEKHG3 PRKCZ TNXB	4.07e-06	196	147	7	36f95f9ef74eb951e41ef46fd136ceaef45208fc
ToppCell	Parenchymal-NucSeq-Immune_Myeloid-Monocytic\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	RASSF2 SH2D3C DENND1A RTN1 PPM1F VCAN LILRB4	4.65e-06	200	147	7	fd72fe6565e2f4885481991492d58c323ab1ad40
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-2m-Neuronal-Interneuron\|2m / Sample Type, Dataset, Time_group, and Cell type.	NAP1L3 CHGA KMT2E RTN1 CAMKV PAFAH1B3 CACNA1G	4.65e-06	200	147	7	08bee924a2654e05df3b39e8a51f93c8b3472175
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Upper_Layer_Occipital\|World / Primary Cells by Cluster	RASSF2 NAP1L3 CHD3 RTN1 CAMKV PAFAH1B3 PLXNA4	4.65e-06	200	147	7	6bbe8e1f3e91678f1bfb14945365c1578a59a604
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Upper_Layer_Occipital-19\|World / Primary Cells by Cluster	RASSF2 NAP1L3 CHD3 RTN1 CAMKV PAFAH1B3 PLXNA4	4.65e-06	200	147	7	c831d9e0a7178e3634da45548f91fa9e8dc6557c
ToppCell	E16.5-samps\|World / Age Group, Lineage, Cell class and subclass	WIZ KIF15 CCNB2 VCAN PAFAH1B3 KIF22	1.03e-05	149	147	6	e94d075f68c1c70c89fab50b1b765b5dda650d09
ToppCell	tumor_Lymph_Node_/_Brain-Myeloid_cells-pDCs\|tumor_Lymph_Node_/_Brain / Location, Cell class and cell subclass	RASSF2 AFF3 SMOC1 SAMD13 PLXNA4 LILRB4	1.43e-05	158	147	6	2af7beb48272e5368d9ba6b80f08d47ab8556c08
ToppCell	NS-control-d_0-4-Myeloid-pDC\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	RASSF2 STAC3 AFF3 CCDC168 PLXNA4 LILRB4	1.83e-05	165	147	6	8b2d43d7c4ee07bd999bd51bc15117ce1fbb2d86
ToppCell	droplet-Lung-nan-21m-Lymphocytic-Proliferating_NK\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHAF1A KIF15 CCNB2 CAPRIN2 SNX22 KIF22	1.90e-05	166	147	6	21ba5fd755c0fb31ada42a1b5d60bede0153323d
ToppCell	PND14-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-Treg-Treg_G2M\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CKAP5 RIMKLB KIF15 CCNB2 ARNT2 KIF22	1.96e-05	167	147	6	d21635df8b74189e3309eaf435af381fbe412574
ToppCell	PND07-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CKAP5 KIF15 CCNB2 VCAN DEK KIF22	2.10e-05	169	147	6	563c267edaade0e5df192ad953801ef9768d4270
ToppCell	Children_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	SMOC1 ITIH1 PTPRN2 ARNT2 ANO7 WNK2	2.10e-05	169	147	6	96a2aec9acf8a6f966973c035e5ade456cf47772
ToppCell	Ionocyte-iono-1\|World / Class top	CEL STAC3 PPARGC1A PLXNA4 GNAS MUC20	2.10e-05	169	147	6	4b68bcb4b5fc3cd2db23cd4edace7444aa2d605c
ToppCell	Ionocyte-iono-2\|World / Class top	CEL AFF3 ZNF691 PLXNA4 GNAS MUC20	2.39e-05	173	147	6	e5ec28ccc5e048fd98de4c876e5c53b866b66228
ToppCell	PND07-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CKAP5 FAP MICAL2 CCNB2 MRNIP KIF22	2.47e-05	174	147	6	1779e67382cb2644534ffb5b9b8f28d32935f4ea
ToppCell	facs-Brain_Non-Myeloid-Cortex-24m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 RTN1 VCAN NCAN NPY ARMH4	2.55e-05	175	147	6	d67c77eee979ad029e7545f383326f0ff77c6e5f
ToppCell	droplet-Lung-21m-Hematologic-Lymphocytic_NK_ILC-natural_killer_cell-proliferating_NK\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CHAF1A KIF15 CCNB2 CAPRIN2 SNX22 KIF22	2.55e-05	175	147	6	6751ee4b312d7f87275f2c35e5878cfc3be3ebe3
ToppCell	facs-Brain_Non-Myeloid-Cortex-24m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 RTN1 VCAN NCAN NPY ARMH4	2.55e-05	175	147	6	1d1cdbf3221b03e24eae38afd57cbd6736b37a53
ToppCell	droplet-Lung-21m-Hematologic-myeloid-myeloid_dendritic_cell-proliferating_dendritic\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CHAF1A RTN1 KIF15 SRGAP3 CCNB2 CD300LG	2.55e-05	175	147	6	73f25bd54309aed1480ddc44bdab518b17e71f92
ToppCell	facs-Brain_Non-Myeloid-Cerebellum_-18m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 VCAN NCAN SNX22 NPY ARMH4	2.64e-05	176	147	6	ef0ff02897104e938c8a632357d8f1a6f014e68a
ToppCell	facs-Brain_Non-Myeloid-Cerebellum_-18m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 VCAN NCAN SNX22 NPY ARMH4	2.64e-05	176	147	6	da0983929fa682a68e536c298a2d7add188b7563
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Macrophage_Dendritic-Plasmacytoid_Dendritic_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	RASSF2 RGS19 AFF3 SH2D3C BRPF1 PLXNA4	2.64e-05	176	147	6	8488997e0f02e874f53fae1690da63e0dd1d0780
ToppCell	B_cells-Naive_B_cells_\|B_cells / Immune cells in Kidney/Urine in Lupus Nephritis	RGS19 AFF3 CHD3 PPARGC1A FRY SNX22	2.81e-05	178	147	6	71ac2eca5cf13a91f86b80690748b0788392dcfc
ToppCell	droplet-Lung-nan-18m-Myeloid-Proliferating_Alveolar_Macrophage\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 CHAF1A CKAP5 B3GNT7 KIF15 CCNB2	2.99e-05	180	147	6	43fd5c498a87bb078d101298b472656f3294686a
ToppCell	P15-Endothelial-proliferative_endothelial_cell\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	CHAF1A KIF15 CCNB2 DEK KIF22 HDGF	3.08e-05	181	147	6	0c5bc1660b8fc1e905ab4230202862de5be46ebd
ToppCell	P15-Endothelial-proliferative_endothelial_cell-proliferative_endothelial_cell\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	CHAF1A KIF15 CCNB2 DEK KIF22 HDGF	3.08e-05	181	147	6	f83565f09dd971c5cad2704a4a86bca0accd955e
ToppCell	facs-Brain_Non-Myeloid-Hippocampus_-18m-Macroglial\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 SMOC1 VCAN NCAN SNX22 ARMH4	3.08e-05	181	147	6	1037051eb82313c13346617b33f3c4c648181c4d
ToppCell	facs-Marrow-B-cells-18m-Myeloid-granulocytopoietic_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CAMP CKAP5 GPR84 KIF15 CCNB2 KIF22	3.18e-05	182	147	6	9025178ede571e3808d4657ad4892152f336c9b4
ToppCell	facs-Marrow-B-cells-18m-Myeloid-granulocytopoietic_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CAMP CKAP5 GPR84 KIF15 CCNB2 KIF22	3.18e-05	182	147	6	c075756cd4bb484ede1be2bcdb9eac60eab0573a
ToppCell	10x5'-bone_marrow-Myeloid_Dendritic-Cycling_Dendritic\|bone_marrow / Manually curated celltypes from each tissue	VWA1 SMOC1 KIF15 CCNB2 LRP2 LILRB4	3.48e-05	185	147	6	9d3168c7f0b1d739f78b368969cf5c77ce202b97
ToppCell	droplet-Heart-nan-18m-Endothelial\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SH2D3C SMOC1 FRY PPM1F CD300LG NOTCH1	3.48e-05	185	147	6	a32d5cb596ebac80eb1ac301055e65d420879ec8
ToppCell	Fetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	PRUNE2 CHGA SMOC1 PLA2G4D PTPRN2 WNK2	3.59e-05	186	147	6	b45cce768e4bf91da194fd9660cab7520dfb15ac
ToppCell	droplet-Marrow-BM-1m-Hematologic-megakaryocyte-erythroid_progenitor_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CAMP CHAF1A GPR84 PLA2G4D ZNF414 CHST12	3.70e-05	187	147	6	6be99f71532b7d679d1287ea1bb08245d9538db7
ToppCell	primary_auditory_cortex_(A1C)-Non-neuronal-Macroglial-Oligo\|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	RASSF2 VWA1 SMOC1 PLEKHH1 PLEKHG3 LRP2	3.81e-05	188	147	6	b04fd6a724c117eb9a979c29b91f90113feb7a5c
ToppCell	ILEUM-non-inflamed-(7)_Endothelial_cell-(7)_Lymphatics\|(7)_Endothelial_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	PRUNE2 B3GNT7 SMOC1 MICAL2 GNAS TNXB	4.04e-05	190	147	6	9ce301841ce9486701fa28eb2a9929e35d476878
ToppCell	droplet-Spleen-nan-18m-Lymphocytic-immature_NKT_cell\|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHAF1A CKAP5 KIF15 CCNB2 KIF22 MUC20	4.04e-05	190	147	6	b99271d139c8d01e20feb95d99f79c9b2756b4cb
ToppCell	facs-Brain_Non-Myeloid-Cortex-3m-Macroglial-oligodendrocyte_precursor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 SMOC1 VCAN NCAN SNX22 ARMH4	4.04e-05	190	147	6	9b825b2586c7b173ff27fcf2abc5860faf50984a
ToppCell	facs-Brain_Non-Myeloid-Cortex-3m-Macroglial-Oligodendrocyte_progenitor_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	B3GNT7 SMOC1 VCAN NCAN SNX22 ARMH4	4.04e-05	190	147	6	d146af1926474328a7c822bc140c4dda66e1bbfb
ToppCell	droplet-Marrow-BM-30m-Myeloid-granulocytopoietic_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZFPM1 CCNB2 DEK SNX22 KIF22 HDGF	4.16e-05	191	147	6	08be56a4055a73c920d345fd3b2052a5ccb675d8
ToppCell	facs-Pancreas-Endocrine-24m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PRUNE2 MIA3 CHGA PTPRN2 EIF4G1 AKAP13	4.16e-05	191	147	6	3387b95a3f2445c672d407922fdce3a91eabaef8
ToppCell	367C-Endothelial_cells-Endothelial-F_(Lymphatics)\|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)	B3GNT7 SMOC1 SRGAP3 MICAL2 PLEKHG3 PRKCZ	4.29e-05	192	147	6	5e709c0714e8eba27e03a6def0544256bedb3ced
ToppCell	367C-Endothelial_cells-Endothelial-F_(Lymphatics)-\|Endothelial_cells / Donor, Lineage, Cell class and subclass (all cells)	B3GNT7 SMOC1 SRGAP3 MICAL2 PLEKHG3 PRKCZ	4.29e-05	192	147	6	5f4f44f15d3a2846981e68296643a4634930a211
ToppCell	facs-Thymus-Flowthrough-24m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHAF1A KIF15 CCNB2 DEK KIF22 HDGF	4.41e-05	193	147	6	fd5a5ead966abe385a22d61a721f9fb1605876f6
ToppCell	LA\|World / Chamber and Cluster_Paper	PRUNE2 AFF3 KLHL29 VCAN LRP2 TNXB	4.41e-05	193	147	6	d4bf89437216baf489ea0239136dcedf3b6714af
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature5_(6)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	AFF3 LIFR FAP SRGAP3 VCAN ARNT2	4.54e-05	194	147	6	b1bb0f846d2865efdd9bc8842b16b9d069785882
ToppCell	facs-Thymus-Flowthrough-24m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHAF1A KIF15 CCNB2 DEK KIF22 HDGF	4.54e-05	194	147	6	5d60262a512590d60bc795d9a0e03c0219e3e15e
ToppCell	IPF-Endothelial-Lymphatic\|Endothelial / Disease state, Lineage and Cell class	B3GNT7 SMOC1 KLHL29 SRGAP3 MICAL2 PRKCZ	4.67e-05	195	147	6	de88e9d22044b4b3e29676ad02b3e9299cc920ad
ToppCell	droplet-Thymus-nan-3m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHAF1A KIF15 CCNB2 DEK KIF22 HDGF	4.67e-05	195	147	6	7ae732f100e9a3c6062be5b877efa1ec9d5b3958
ToppCell	droplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MIA3 FRYL CHGA KMT2C PTPRN2 HERC1	4.67e-05	195	147	6	7796ea9247f4c63762f0de8490fed08b9717fa23
ToppCell	droplet-Thymus-nan-18m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHAF1A CKAP5 KIF15 CCNB2 DEK KIF22	4.67e-05	195	147	6	043e2f19d95e94cd5219e2c415f322ed340aa80f
ToppCell	Tracheal-10x3prime_v2-Epithelial-Epi_airway_neuro-secretory\|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations	CEL CKAP5 CHGA RTN1 RINL NPY	4.95e-05	197	147	6	ff4df77117165b6b25315e29b0722cc136eba607
ToppCell	severe-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	CHD3 FRYL SEC31B ZBTB37 KMT2C HERC1	4.95e-05	197	147	6	57ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCell	Tracheal-10x3prime_v2-Immune_Myeloid-Dendritic_cell-DC_2\|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations	RASSF2 RGS19 STAC3 AFF3 GPR84 CDH17	4.95e-05	197	147	6	febafd8f0f5bb9a09f496f240e6b6b5e9275669b
ToppCell	droplet-Thymus-nan-3m-Lymphocytic-DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHAF1A KIF15 CCNB2 DEK KIF22 HDGF	4.95e-05	197	147	6	9b2c67de46bd59bf56c81a0d10b84cf4a041c120
ToppCell	Somatosensory_Cortex_(S1)-Neuronal\|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	AFF3 RTN1 PPARGC1A FRY PTPRN2 MICAL2	5.09e-05	198	147	6	c01091ef18e096d792ea2a7a715764a5b215355f
ToppCell	Primary_Visual_cortex_(V1C)-Neuronal\|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	AFF3 RTN1 FRY PTPRN2 MICAL2 GNAS	5.09e-05	198	147	6	8ab40fae14fe02e39bc8c8da187a5cd60c787643
ToppCell	Brain_organoid-organoid_Velasco_nature-3_mon-Neuronal-CPNs\|3_mon / Sample Type, Dataset, Time_group, and Cell type.	RASSF2 NAP1L3 RTN1 CAMKV PLXNA4 PRKCZ	5.09e-05	198	147	6	60d8d3bbd754ffde41c50013d822667b185a9751
ToppCell	mLN-Dendritic_cell-cDC2\|mLN / Region, Cell class and subclass	CHAF1A STAC3 RTN1 ASAP2 CD300LG CDH17	5.23e-05	199	147	6	cb17bccb47d04f7793709f9a4376fcc8ce95430c
ToppCell	10x3'2.3-week_17-19-Lymphocytic_B-B_lineage-pre_pro_B_progenitor\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	CHAF1A KIF15 CCNB2 DEK NPY KIF22	5.23e-05	199	147	6	99778178e3ec121802db938db8c5475d19b43fec
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Glial-Neuronal-OPC-OPC-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	SMOC1 RTN1 VCAN ARNT2 HYDIN SNX22	5.23e-05	199	147	6	19a97e27a4758e794ce7246d295e112b47931a48
ToppCell	mLN-(5)_Dendritic_cell-(50)_cDC2\|mLN / shred on region, Cell_type, and subtype	CHAF1A STAC3 RTN1 ASAP2 CD300LG CDH17	5.23e-05	199	147	6	8d1b18596a0965427abefe0be744c74e4c11d5d3
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW16-Neuronal-Neurons\|GW16 / Sample Type, Dataset, Time_group, and Cell type.	AFF3 CHGA RTN1 CAMKV PAFAH1B3 PLXNA4	5.23e-05	199	147	6	ae575ed7582f2a4218f6cbcbf5f7f0ce7a5bc26b
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-Proliferating-Cycling_IN_Progenitors\|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.	SMOC1 KIF15 CCNB2 DEK NPY KIF22	5.23e-05	199	147	6	f315ec3fb6c0799668c9195f836a77fc0db2b615
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_\|World / Primary Cells by Cluster	AFF3 CHD3 RTN1 CAMKV PAFAH1B3 PLXNA4	5.23e-05	199	147	6	058373b4ac3cec2108cb24265628ff0a50646e33
ToppCell	normal_Lymph_Node-T/NK_cells-Undetermined\|normal_Lymph_Node / Location, Cell class and cell subclass	CHAF1A KIF15 CCNB2 DEK KIF22 HDGF	5.23e-05	199	147	6	cefcfe639a3396bccf2354ca605a1e18b964fbf2
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW09-Neuronal\|GW09 / Sample Type, Dataset, Time_group, and Cell type.	RASSF2 AFF3 NAP1L3 CHGA RTN1 CAMKV	5.38e-05	200	147	6	e9eb348a66011d8aace4331f84690ae27cb0d061
ToppCell	Brain_organoid-organoid_Velasco_nature-6_mon-Neuronal-Ventral_Precursors\|6_mon / Sample Type, Dataset, Time_group, and Cell type.	CHAF1A KIF15 CCNB2 DEK NPY KIF22	5.38e-05	200	147	6	c8ea0db79b1521f8c90d0d749280c354d3907c3a
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-6_mon-Proliferating-Cycling_Progenitors_nGenesUnder4k\|6_mon / Sample Type, Dataset, Time_group, and Cell type.	CHAF1A KIF15 CCNB2 DEK NPY KIF22	5.38e-05	200	147	6	8223d2c9b9e05b1d26e3de1bc0226d175af2e7b2
ToppCell	Neuronal\|World / cells hierarchy compared to all cells using T-Statistic	AFF3 RTN1 FRY PTPRN2 MICAL2 HERC1	5.38e-05	200	147	6	48d801219bc771d6c7e151dc88ca4c179988de85
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-3m-Neuronal\|3m / Sample Type, Dataset, Time_group, and Cell type.	AFF3 CHD3 CHGA RTN1 CAMKV PAFAH1B3	5.38e-05	200	147	6	af99d90070e2933fd2e9512590c6cf3bd6e15539
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-6_mon-Proliferating\|6_mon / Sample Type, Dataset, Time_group, and Cell type.	CHAF1A KIF15 CCNB2 DEK NPY KIF22	5.38e-05	200	147	6	8f9e76048ae6f45218a09a95a2c4b31e8a8937b2
ToppCell	Parenchymal-10x3prime_v2-Immune_Myeloid-Dendritic_cell-DC_plasmacytoid\|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations	ATP6V0A1 GPR84 SMOC1 PLXNA4 LILRB4	8.27e-05	134	147	5	0e3f37ef041b751ed45060b5ce39385a2731370b
ToppCell	primary_visual_cortex-Non-neuronal-oligodendrocyte-Oligo-OPC_Pdgfra_Grm5\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	SMOC1 ZNF469 ADAMTS7 VCAN SNX22	9.84e-05	139	147	5	a957ea4e581646c76b16b6a7f89579b8c7ac35b6
ToppCell	facs-Marrow-B-cells-24m-Myeloid\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PCDHA2 LIFR SRGAP3 RTL9 ROS1	1.12e-04	143	147	5	6df16bf0324661cd9707df69cb39f4b5498d6d49
ToppCell	Frontal_cortex-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Slc17a6-Slc17a7.Nr4a2_(Claustrum)\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	LRRC66 OTOP2 ROS1 CDH17	1.29e-04	78	147	4	564ea2c113058df595c3b69827cf9a72380b48fc
ToppCell	Frontal_cortex-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Slc17a6-Slc17a7.Nr4a2_(Claustrum)-\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	LRRC66 OTOP2 ROS1 CDH17	1.29e-04	78	147	4	dfe16ac0b10dce7ecf4b3a0b4e1013ac58cb9fc1
ToppCell	Frontal_cortex-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Slc17a6-Slc17a7.Nr4a2_(Claustrum)--\|Frontal_cortex / BrainAtlas - Mouse McCarroll V32	LRRC66 OTOP2 ROS1 CDH17	1.29e-04	78	147	4	6aa418ea30dfa7df2fc08cac5b31e3a654aaa7f0
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW19-Neuronal-Cortical_neuron\|GW19 / Sample Type, Dataset, Time_group, and Cell type.	AFF3 RTN1 CAMKV VCAN PLXNA4	1.32e-04	148	147	5	a1269312903fc27830c1835dabf660c659a711be
ToppCell	TCGA-Breast-Primary_Tumor-Breast_Carcinoma-Infiltrating_Ductal_and_Lobular_Carcinoma-6\|TCGA-Breast / Sample_Type by Project: Shred V9	MXRA5 NAP1L3 FAP VCAN ARMH4	1.36e-04	149	147	5	3904f8ce9078de238600ceceee0116af52256a1c
ToppCell	390C-Lymphocytic-NK_cells-NK_cell_E\|390C / Donor, Lineage, Cell class and subclass (all cells)	STAC3 AFF3 ZNF440 ULK1 SNX22	1.64e-04	155	147	5	98d8432739965dd1ab77c899cb6321f7f05eaa46
Disease	Intellectual Disability	AFF3 NSD1 CHD3 KMT2E CIC KMT2C FRY CTCF SRGAP3 LRP2 CACNA1G GNAS	1.37e-06	447	138	12	C3714756
Disease	eye measurement	SRSF2 ZNF469 AKAP13 HERC1	7.39e-06	27	138	4	EFO_0004731
Disease	Profound Mental Retardation	NSD1 CIC FRY SRGAP3 CACNA1G GNAS	5.06e-05	139	138	6	C0020796
Disease	Mental Retardation, Psychosocial	NSD1 CIC FRY SRGAP3 CACNA1G GNAS	5.06e-05	139	138	6	C0025363
Disease	Mental deficiency	NSD1 CIC FRY SRGAP3 CACNA1G GNAS	5.06e-05	139	138	6	C0917816
Disease	Colorectal Carcinoma	RASSF2 OTOP2 LIFR KMT2C ARNT PTPRN2 PPM1F EIF4G1 PKNOX1 LRP2 PRKCZ GNAS	1.19e-04	702	138	12	C0009402
Disease	migraine disorder, type 2 diabetes mellitus	CCDC184 FRYL DENND1A RIMKLB	1.82e-04	60	138	4	MONDO_0005148, MONDO_0005277
Disease	prolyl endopeptidase FAP measurement	CEL FAP	2.15e-04	5	138	2	EFO_0021856
Disease	congenital heart disease (implicated_via_orthology)	RNF40 KMT2C LRP2 CHD6	3.13e-04	69	138	4	DOID:1682 (implicated_via_orthology)
Disease	eating disorder	SH2D3C B3GNT7 C4orf17	4.49e-04	32	138	3	EFO_0005203
Disease	cathepsin S measurement	MIA3 ARNT	5.97e-04	8	138	2	EFO_0008073
Disease	Prostatic Neoplasms	CHD3 LIFR KMT2C CTCF BRPF1 CIZ1 LRP2 AKAP13 CHD6 PRKCZ	6.63e-04	616	138	10	C0033578
Disease	neutrophil count	PRUNE2 CEL NSD1 MUS81 PCDHA2 KMT2E CIC MICAL2 PKNOX1 CHST12 MRNIP AKAP13 TNXB HYDIN SERTAD3 HDGF	7.59e-04	1382	138	16	EFO_0004833
Disease	Liver Diseases, Parasitic	KMT2C GNAS	7.65e-04	9	138	2	C0023897
Disease	Schizophrenia	CHGA ITIH1 LIFR PPARGC1A CTCF SRGAP3 NCAN LRP2 GNAS TOP3B TNXB NPY	9.30e-04	883	138	12	C0036341
Disease	neuroblastoma (is_implicated_in)	CHAF1A NSD1	9.53e-04	10	138	2	DOID:769 (is_implicated_in)
Disease	Adenoid Cystic Carcinoma	NSD1 KMT2C VCAN NOTCH1	1.27e-03	100	138	4	C0010606
Disease	myeloid white cell count	PRUNE2 DLG5 SETD1B CEL CHGA KMT2E CIC KLHL29 FAP MICAL2 PKNOX1 SERTAD3	1.54e-03	937	138	12	EFO_0007988
Disease	extracellular matrix protein 1 measurement	MIA3 ARNT	1.64e-03	13	138	2	EFO_0008126
Disease	Connective Tissue Diseases	ZNF469 NOTCH1	1.64e-03	13	138	2	C0009782
Disease	Proteinuria	ADAMTS7 LRP2	2.19e-03	15	138	2	HP_0000093
Disease	pulse pressure measurement	MXRA5 CKAP5 PCDHA2 FRYL SNX19 ITIH1 KLHL29 PPARGC1A ASAP2 KIF15 ZNF827 PLEKHO2 AKAP13 HYDIN CDH17	2.24e-03	1392	138	15	EFO_0005763
Disease	PR interval	ZFPM1 PPARGC1A ZNF469 MICAL2 ZNF358 CACNA1G CHD6 DEK	2.35e-03	495	138	8	EFO_0004462
Disease	uric acid measurement	CEL ZBTB4 PLEKHH1 FAP ASAP2 ZNF827 LRP2 AKAP13 GNAS	2.36e-03	610	138	9	EFO_0004761
Disease	Huntington's disease (biomarker_via_orthology)	PPARGC1A NPY	2.50e-03	16	138	2	DOID:12858 (biomarker_via_orthology)
Disease	Malignant neoplasm of prostate	CHD3 LIFR KMT2C BRPF1 CIZ1 LRP2 AKAP13 CHD6 PRKCZ	2.52e-03	616	138	9	C0376358
Disease	response to carboplatin	ZNF827 AKAP13 LILRB4	2.56e-03	58	138	3	GO_0097328
Disease	MAJOR AFFECTIVE DISORDER 2	PRKCZ CDH17	2.82e-03	17	138	2	C1839839
Disease	hyperglycemia (implicated_via_orthology)	PPARGC1A PRKCZ	2.82e-03	17	138	2	DOID:4195 (implicated_via_orthology)
Disease	age at menopause	LRRC66 FRYL ZFPM1 DENND1A CHD6 TOP3B	3.04e-03	302	138	6	EFO_0004704
Disease	risk-taking behaviour	CHD3 KMT2E DENND1A KLHL29 PTPRN2 PPM1F CACNA1G PRKCZ TNXB ARMH4	3.24e-03	764	138	10	EFO_0008579
Disease	coronary artery disease	MIA3 CEL RGS19 ZFPM1 FAP ASAP2 ADAMTS7 ZNF827 CHST12 AKAP13 TNXB WNK2 CDH17	4.04e-03	1194	138	13	EFO_0001645
Disease	Bladder Neoplasm	KMT2C NCAN CHD6 NOTCH1	4.30e-03	140	138	4	C0005695
Disease	Malignant neoplasm of urinary bladder	KMT2C NCAN CHD6 NOTCH1	4.41e-03	141	138	4	C0005684

Protein segments in the cluster

Peptide	Gene	Start	Entry
PMEDSPIPDMSGKES	TADA3	276	O75528
RPMDGQDQAPDESPK	AFF3	236	P51826
ANPEMTSDVPSLGPA	ARNT	6	P27540
STPDNRKEMAPVPGT	RNF40	556	O75150
GSEKPQSMFEPPQVS	AKAP2	616	Q9Y2D5
SVTEVPDVMEGSNPP	VCAN	2791	P13611
PAATDAPNGDLTPEM	CTCF	706	P49711
PMDGQDQAPDISPTL	AFF2	291	P51816
EPGSLTPDKEKPSQM	ARMH4	246	Q86TY3
SPSDDMDSIIFPKPE	AKAP13	1446	Q12802
LPATPQGKNMTPESE	CHAF1A	256	Q13111
VPPTDDSKEAQMPAV	CEL	736	P19835
PKPGTMGNAIEEEAP	ADAMTS7	1036	Q9UKP4
AVNPPEMASDIPGSV	ARNT2	6	Q9HBZ2
DMEKEPGIPSLTPQA	NSD1	1246	Q96L73
EVDAPPEGDQMPSST	RASSF2	111	P50749
KGSESPEMGPEVTPA	RFX5	181	P48382
QMPGPSKEEQSLPAG	PTPRN2	476	Q92932
GEDPPKTDLMAFSPS	PCDHA2	761	Q9Y5H9
MSGEENPASKPTPVQ	PAFAH1B3	1	Q15102
QMKLPAEGPEPEADS	PAGE1	91	O75459
PSSKMEEPGPRFSQD	MRNIP	131	Q6NTE8
SAPMTAPNPITGEDE	ANO7	471	Q6IWH7
SAMAPTPPQGEVDAD	NOTCH1	1856	P46531
MSSEEDKSVEQPQPP	KMT2C	1	Q8NEZ4
VMDSAAEDPQSPKTP	KIF15	1131	Q9NS87
EVSGVMSKPNVDPQP	LIMD1	321	Q9UGP4
HPGSDPTKPDATMVV	ITIH1	846	P19827
PSETPTMDIATKGPF	MUC20	586	Q8N307
SVSTAAGPEDQPLMP	LILRB4	231	Q8NHJ6
KPSGSEPPAEECRMT	HHLA3	11	Q9XRX5
MPLPEPSEQEGESVK	FLYWCH1	1	Q4VC44
PAEDSVKPNPGSDMN	ASAP2	506	O43150
PETKSEPGQGPEMQE	FAM184B	181	Q9ULE4
MPLPEPSEQEGESVK	FLYWCH2	1	Q96CP2
APGFKEPEESMSTSP	HERC1	1606	Q15751
PEMVSPPGSTTKEQV	PLXNA4	261	Q9HCM2
GSPEPMAAPASASQK	KIF22	411	Q14807
TMVAPTDGNPDNKPI	FRYL	1486	O94915
SHMEQKATAPEAPSP	ZFPM1	31	Q8IX07
LPMEVEKNSTPSEPG	HDGF	191	P51858
MEQDEGPSTPPAKQS	DLG5	1471	Q8TDM6
AKGPVPSFSELMEDP	KMT2E	1311	Q8IZD2
SEGPTLPEPMAEAQS	GPR152	336	Q8TDT2
PEDPEATMTDQGPSK	NLRP5	151	P59047
MENEQKESVAATPPP	LRP2	4601	P98164
DNTVPFKTPSNEMTP	PAXBP1	371	Q9Y5B6
METDAPQPGLASPDS	MSI1	1	O43347
MAEKSPPEASAKAQP	GPR84	286	Q9NQS5
GDASVEPDPLQMPTF	NDUFB7	11	P17568
DPFEKPLISAPDSGM	LRRC66	771	Q68CR7
MSEELAQGPKESPPA	OTOP2	1	Q7RTS6
SSMPDGTPPPQEAEE	PPARGC1A	126	Q9UBK2
DAEFEKMQGQSPPAP	CKAP5	806	Q14008
EHQKTTTPDPMDDPC	HYDIN	1566	Q4G0P3
PNMTDAPTAPKAGTT	ICE2	426	Q659A1
EPAMAQPDSTAPEGA	CAMKV	461	Q8NCB2
KDPLASGPPDSMAAS	CACNA1G	2341	O43497
PSPTPEDVSMKEENL	CCNB2	91	O95067
AMEGEPTAIPSQPFK	CHD6	1976	Q8TD26
EKMETEADAPSPAPS	CHD3	1591	Q12873
EGTPTQPASEKEPEM	DEK	11	P35659
CDDKASGESPSEPMP	DIS3L	316	Q8TF46
SMEPAAETGKPPTVK	C4orf17	236	Q53FE4
GDKSPSVSPSMPENQ	CCDC144B	161	Q3MJ40
SSSMDPDKGALPQPS	C16orf90	136	A8MZG2
TPMCEEQDSKQPETP	CAPRIN2	531	Q6IMN6
TMDGDPDTPKPVSFT	CAMP	66	P49913
PEEQAKEVTASMAPP	EIF4G1	421	Q04637
LGQDDMAIPSKPPAA	DENND1A	641	Q8TEH3
ADSLQQKDGEPPMPV	FRY	506	Q5TBA9
ESAGDPKNPLTMPEN	CCDC168	996	Q8NDH2
KDVAAPTPMASQGPQ	B3GNT7	66	Q8NFL0
APKPVEMVENSTDPH	CDH17	241	Q12864
EEEEKEMPSPATPSS	CCDC184	141	Q52MB2
MPNDEAFSKPSTPSE	DMRT1	1	Q9Y5R6
SPPSKIASMEIPNDD	LIFR	616	P42702
PPVTTGKEMASAQEP	MICAL2	591	O94851
PQKSSPMASGAEETP	PPM1F	6	P49593
GPPVSKAPTMDAQQD	nan	776	A6NNC1
KEVTMDVPAPNAPGV	PLA2G4D	251	Q86XP0
SVPDAGEMSTLPKPA	RTL9	326	Q8NET4
GEMSTLPKPAPDAEA	RTL9	331	Q8NET4
ASEESPKREQDSPPM	RTN1	476	Q16799
MPTPHEAEKQITGPE	RGS19	1	P49795
ANEMMPETPTGDSDP	SPANXA1	21	Q9NS26
PPPDVEGMTSLKVDN	SRSF2	6	Q01130
QMSREKQPDPESAPS	TGIF2LX	166	Q8IUE1
SEKGASPDMAPILEP	PRUNE2	2206	Q8WUY3
KDLDPGPVTTEDTPM	MIA3	1106	Q5JRA6
QPPPSELTMSEGAVV	PKNOX1	356	P55347
ATEDSPSVNGMEPPS	PLEKHG3	676	A1L390
AGVDDTPVNMDSPPI	GNAS	316	Q5JWF2
DEGPTVNPMDSTVTP	NCAN	821	O14594
VKNSMENGRPPDPAD	SAMD13	36	Q5VXD3
TDEPPADTQGMSIPA	SETD1B	1771	Q9UPS6
EVQDNTPSEMPPLEG	NAP1L3	176	Q99457
MNFSKADPPPEESQA	WIZ	1626	O95785
VPMTLGSKSQQPPED	SEC31B	156	Q9NQW1
PSEGCPSSEIPMEKE	PPP1R15B	381	Q5SWA1
SVSPEANKEMPGLDP	SRBD1	636	Q8N5C6
ELDTSMDGTEPPQNP	SERTAD3	101	Q9UJW9
STEDPPMDLPANGFS	BRPF1	961	P55201
EAPSQAPEGDVISMP	CD300LG	301	Q6UXG3
PPAEERTSAKGPETM	CIC	1251	Q96RK0
PQALPEPMQESKAEG	CHGA	151	P10645
KETEQPPAPGSMEES	CHST12	86	Q9NRB3
SPAEGPEKMQDSSPV	C15orf39	96	Q6ZRI6
QTMPVEDKSDPPEGS	CIZ1	201	Q9ULV3
GPQEVPVPAMIASSD	FAP	276	Q12884
MAQPEDKAPEVPTEG	RINL	1	Q6ZS11
DHPPITPMKSATEAE	TOP3B	386	O95985
MKPPEEGTETSGDSQ	TSPY10	291	P0CW01
GSSDPVGPPMQELKD	VWA1	146	Q6PCB0
MKPPEEGTETSGDSQ	TSPY2	291	A6NKD2
DDGSKPTPTMETQPV	SMOC1	176	Q9H4F8
PTPTMETQPVFDGDE	SMOC1	181	Q9H4F8
NPMSVSNDGKPSDLP	ZNF440	541	Q8IYI8
APSSSMSEEPGPEQA	ZNF414	36	Q96IQ9
SESPGRMDEPKQPSS	ZBTB37	326	Q5TC79
EMGSEKEQSPEPHLP	ZNF691	31	Q5VV52
MKPPEEGTETSGDSQ	TSPY1	291	Q01534
AAGSKPSSESQPPME	NUFIP1	56	Q9UHK0
VMSANGKPDPDTVPD	MRPL10	246	Q7Z7H8
VGSPAVTPTEKMFPN	SRGAP3	1076	O43295
HSPMKTDPVGSPLSE	RFX8	141	Q6ZV50
APGKDEEMAPASTEP	TNXB	2281	P22105
SKPDNPGEDAPAEDM	NPY	31	P01303
APMATSQPEEDSFGP	ZBTB4	191	Q9P1Z0
PASEPPFIMAVKEDG	ROS1	671	P08922
PELGPPASTAVDNMS	RIMKLB	331	Q9ULI2
MKTETVPPFQETPAG	SNX19	1	Q92543
AEQDSVPSEPGIQPM	PLEKHH1	186	Q9ULM0
PEAEGPRQSPEKSHM	SNX22	11	Q96L94
TLAPVGEDAMKTPSP	SYMPK	1246	Q92797
QPSTVEMVDGETSPP	TOP3A	501	Q13472
MKPPEEGTETSGDSQ	TSPY3	291	P0CV98
MKPPEEGTETSGDSQ	TSPY8	291	P0CW00
EMGTSSKEPEDPGTP	ZNF469	2341	Q96JG9
VMPGSQPSLNSEEKP	ZNF827	1001	Q17R98
PQEKSPGKMSPECDG	ZNF264	146	O43296
PCPETPQERKEMASG	ATP6V0A1	246	Q93050
DKPDCSGPPMDISNK	TM9SF2	246	Q99805
SKPSTMETEEGPPQQ	TSSK1B	346	Q9BXA7
EATQDDMVTVPKSPP	SH2D3C	51	Q8N5H7
KATGPLEDTPAMEPN	SH2D3C	126	Q8N5H7
VSVNGMDDSPEPAKP	PLEKHO2	341	Q8TD55
MDDSPEPAKPSQAEG	PLEKHO2	346	Q8TD55
LPQDGAAPATSTMPE	WNK2	1431	Q9Y3S1
GTKEMELPPEPQANG	STAC3	36	Q96MF2
APDPGSTESLQEKPM	ULK1	711	O75385
EAPGSEPQDPDPMSS	ZNF358	76	Q9NW07
PPSKQMRESDNPGTG	KLHL29	131	Q96CT2
SVMPSQEPPVDDKNE	PRKCZ	186	Q05513
PDGSILKAPMDDPDS	MXRA5	516	Q9NR99
VQDSSMPVPAQPKAG	MUS81	111	Q96NY9