Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	nuclear retinoid X receptor binding	NSD1 NR1H2 SUMO2	2.66e-04	23	110	3	GO:0046965
GeneOntologyMolecularFunction	alpha-1,4-glucosidase activity	SI GAA	2.97e-04	5	110	2	GO:0004558
GeneOntologyMolecularFunction	histone H3K4me/H3K4me2/H3K4me3 demethylase activity	KDM5C KDM5D	4.45e-04	6	110	2	GO:0034647
GeneOntologyMolecularFunction	histone H3 demethylase activity	KDM4C KDM5C KDM5D	4.82e-04	28	110	3	GO:0141052
GeneOntologyMolecularFunction	intracellularly cGMP-activated cation channel activity	CNGB1 CNGA2	6.20e-04	7	110	2	GO:0005223
GeneOntologyMolecularFunction	alpha-glucosidase activity	SI GAA	6.20e-04	7	110	2	GO:0090599
GeneOntologyMolecularFunction	histone demethylase activity	KDM4C KDM5C KDM5D	6.53e-04	31	110	3	GO:0032452
GeneOntologyMolecularFunction	protein demethylase activity	KDM4C KDM5C KDM5D	7.18e-04	32	110	3	GO:0140457
GeneOntologyMolecularFunction	nuclear androgen receptor binding	KDM4C NSD1 KDM5D	7.87e-04	33	110	3	GO:0050681
GeneOntologyMolecularFunction	histone H3K4 demethylase activity	KDM5C KDM5D	8.24e-04	8	110	2	GO:0032453
GeneOntologyMolecularFunction	intracellularly cAMP-activated cation channel activity	CNGB1 CNGA2	1.31e-03	10	110	2	GO:0005222
GeneOntologyBiologicalProcess	calcium-independent cell-matrix adhesion	FN1 PKD1 VWA2	5.56e-07	4	108	3	GO:0007161
GeneOntologyCellularComponent	non-motile cilium membrane	CNGB1 CNGA2	8.35e-05	3	111	2	GO:0098804
GeneOntologyCellularComponent	basement membrane	NID2 FN1 ITGB4 FREM2 VWA2	4.88e-04	122	111	5	GO:0005604
GeneOntologyCellularComponent	intracellular cyclic nucleotide activated cation channel complex	CNGB1 CNGA2	5.77e-04	7	111	2	GO:0017071
GeneOntologyCellularComponent	extracellular matrix	NID2 COL6A3 COL11A1 FN1 ADAMTSL3 ITGB4 ITIH5 FREM2 FCGBP KAZALD1 VWA2	7.38e-04	656	111	11	GO:0031012
GeneOntologyCellularComponent	external encapsulating structure	NID2 COL6A3 COL11A1 FN1 ADAMTSL3 ITGB4 ITIH5 FREM2 FCGBP KAZALD1 VWA2	7.57e-04	658	111	11	GO:0030312
HumanPheno	Aplasia of the bladder	ITGB4 FREM2 CC2D2A	5.94e-06	5	44	3	HP:0010477
MousePheno	abnormal somatic sensory system morphology	COL11A1 EBF3 SH2D3C TMEM43 ADGRV1 EBF2 TENM3 SH3PXD2A B3GNT2 DCHS1 CC2D2A NR1H2 CNGB1 CNGA2 DISP1 TRAPPC9	5.79e-06	702	87	16	MP:0000959
MousePheno	abnormal respiratory system morphology	COL11A1 STAC3 NKX2-3 ITGB4 EBF2 QSOX1 FREM2 SH3PXD2A B3GNT2 PKD1 DCHS1 CC2D2A SOCS1 NR1H2 CNGA2 DISP1 TRAPPC9 MAD2L1	5.03e-05	1027	87	18	MP:0002132
MousePheno	abnormal interatrial septum morphology	FREM2 SH3PXD2A PKD1 DCHS1 CC2D2A TRAPPC9	5.34e-05	107	87	6	MP:0000282
MousePheno	abnormal heart valve morphology	CYFIP2 FREM2 SH3PXD2A PKD1 DCHS1 CC2D2A TRAPPC9	6.88e-05	163	87	7	MP:0000285
MousePheno	abnormal pharynx morphology	NKX2-3 SH3PXD2A DISP1 TRAPPC9	8.79e-05	38	87	4	MP:0002234
MousePheno	abnormal embryonic tissue morphology	FN1 USP9X NSD1 DIDO1 TRRAP FREM2 MGAT1 MTHFD1 SH3PXD2A PKD1 XRN1 DCHS1 CC2D2A SUMO2 ROBO3 DISP1 MAD2L1 GABPA	1.46e-04	1116	87	18	MP:0002085
MousePheno	abnormal sensory neuron morphology	COL11A1 EBF3 SH2D3C TMEM43 EBF2 TENM3 B3GNT2 CC2D2A NR1H2 CNGB1 CNGA2	1.63e-04	473	87	11	MP:0000965
MousePheno	abnormal somatic nervous system morphology	COL11A1 EBF3 STAC3 SH2D3C TMEM43 ADGRV1 EBF2 TENM3 SH3PXD2A B3GNT2 DCHS1 CC2D2A NR1H2 CNGB1 CNGA2 DISP1 TRAPPC9	1.65e-04	1025	87	17	MP:0002752
MousePheno	abnormal olfactory nerve morphology	SH2D3C EBF2 CNGA2	1.78e-04	18	87	3	MP:0005236
Domain	VWFA	COL6A3 CPNE8 CPNE9 ITGAM ITGB4 ITIH5 CPNE3 VWA2	2.40e-08	82	108	8	PS50234
Domain	VWA	COL6A3 CPNE8 CPNE9 ITGAM ITGB4 ITIH5 CPNE3 VWA2	2.91e-08	84	108	8	SM00327
Domain	VWF_A	COL6A3 CPNE8 CPNE9 ITGAM ITGB4 ITIH5 CPNE3 VWA2	1.06e-07	99	108	8	IPR002035
Domain	COE	EBF3 EBF1 EBF2	7.49e-07	4	108	3	PS01345
Domain	Transcription_factor_COE	EBF3 EBF1 EBF2	7.49e-07	4	108	3	IPR003523
Domain	COE_HLH	EBF3 EBF1 EBF2	7.49e-07	4	108	3	IPR032201
Domain	COE_DBD	EBF3 EBF1 EBF2	7.49e-07	4	108	3	IPR032200
Domain	Transcription_factor_COE_CS	EBF3 EBF1 EBF2	7.49e-07	4	108	3	IPR018350
Domain	COE1_HLH	EBF3 EBF1 EBF2	7.49e-07	4	108	3	PF16423
Domain	COE1_DBD	EBF3 EBF1 EBF2	7.49e-07	4	108	3	PF16422
Domain	Calx_beta	ADGRV1 ITGB4 FREM2	1.03e-05	8	108	3	SM00237
Domain	Calx_beta	ADGRV1 ITGB4 FREM2	1.54e-05	9	108	3	IPR003644
Domain	Copine	CPNE8 CPNE9 CPNE3	1.54e-05	9	108	3	PF07002
Domain	Copine	CPNE8 CPNE9 CPNE3	1.54e-05	9	108	3	IPR010734
Domain	Calx-beta	ADGRV1 ITGB4 FREM2	1.54e-05	9	108	3	PF03160
Domain	JmjN	KDM4C KDM5C KDM5D	2.19e-05	10	108	3	SM00545
Domain	JmjN	KDM4C KDM5C KDM5D	2.19e-05	10	108	3	PF02375
Domain	JMJN	KDM4C KDM5C KDM5D	2.19e-05	10	108	3	PS51183
Domain	JmjN	KDM4C KDM5C KDM5D	2.19e-05	10	108	3	IPR003349
Domain	SEP	UBXN2B NSFL1C	9.90e-05	3	108	2	SM00553
Domain	PHD	KDM4C KDM5C NSD1 DIDO1 KDM5D	1.66e-04	89	108	5	SM00249
Domain	Znf_PHD	KDM4C KDM5C NSD1 DIDO1 KDM5D	1.85e-04	91	108	5	IPR001965
Domain	Lys_sp_deMease-like_dom	KDM5C KDM5D	1.97e-04	4	108	2	IPR013637
Domain	SEP_domain	UBXN2B NSFL1C	1.97e-04	4	108	2	IPR012989
Domain	Glyco_hydro_31_CS	SI GAA	1.97e-04	4	108	2	IPR030459
Domain	Gal_mutarotase_N	SI GAA	1.97e-04	4	108	2	IPR031727
Domain	PLU-1	KDM5C KDM5D	1.97e-04	4	108	2	PF08429
Domain	SEP	UBXN2B NSFL1C	1.97e-04	4	108	2	PF08059
Domain	SEP	UBXN2B NSFL1C	1.97e-04	4	108	2	PS51399
Domain	NtCtMGAM_N	SI GAA	1.97e-04	4	108	2	PF16863
Domain	Znf_FYVE_PHD	KDM4C KDM5C NSD1 MYRIP DIDO1 KDM5D	2.12e-04	147	108	6	IPR011011
Domain	ZF_PHD_2	KDM4C KDM5C NSD1 DIDO1 KDM5D	2.26e-04	95	108	5	PS50016
Domain	ZF_PHD_1	KDM4C KDM5C NSD1 DIDO1 KDM5D	2.37e-04	96	108	5	PS01359
Domain	VWA	COL6A3 ITGAM ITIH5 VWA2	3.08e-04	56	108	4	PF00092
Domain	GLYCOSYL_HYDROL_F31_2	SI GAA	3.28e-04	5	108	2	PS00707
Domain	YD	NID2 TENM3	3.28e-04	5	108	2	IPR006530
Domain	zf-C5HC2	KDM5C KDM5D	3.28e-04	5	108	2	PF02928
Domain	Znf_C5HC2	KDM5C KDM5D	3.28e-04	5	108	2	IPR004198
Domain	Ig_E-set	CPAMD8 EBF3 EBF1 EBF2 TGM1	3.44e-04	104	108	5	IPR014756
Domain	JmjC	KDM4C KDM5C KDM5D	3.48e-04	24	108	3	PF02373
Domain	-	COL6A3 FN1 EBF3 FNDC3A EBF1 ADAMTSL3 ITGB4 EBF2 TGM1 SIGIRR KAZALD1 ROBO3	4.50e-04	663	108	12	2.60.40.10
Domain	Glyco_hydro_31_AS	SI GAA	4.89e-04	6	108	2	IPR030458
Domain	IPT	EBF3 EBF1 EBF2	4.97e-04	27	108	3	SM00429
Domain	Zinc_finger_PHD-type_CS	KDM5C NSD1 DIDO1 KDM5D	5.46e-04	65	108	4	IPR019786
Domain	Glyco_hydro_31	SI GAA	6.83e-04	7	108	2	IPR000322
Domain	Glyco_hydro_31	SI GAA	6.83e-04	7	108	2	PF01055
Domain	GLYCOSYL_HYDROL_F31_1	SI GAA	6.83e-04	7	108	2	PS00129
Domain	TIG	EBF3 EBF1 EBF2	7.51e-04	31	108	3	PF01833
Domain	Ig-like_fold	COL6A3 FN1 EBF3 FNDC3A EBF1 ADAMTSL3 ITGB4 EBF2 TGM1 SIGIRR KAZALD1 ROBO3	7.83e-04	706	108	12	IPR013783
Domain	IPT	EBF3 EBF1 EBF2	8.25e-04	32	108	3	IPR002909
Domain	JMJC	KDM4C KDM5C KDM5D	8.25e-04	32	108	3	PS51184
Domain	JmjC_dom	KDM4C KDM5C KDM5D	8.25e-04	32	108	3	IPR003347
Domain	-	COL6A3 ITGB4 ITIH5 VWA2	8.91e-04	74	108	4	3.40.50.410
Domain	JmjC	KDM4C KDM5C KDM5D	9.04e-04	33	108	3	SM00558
Domain	P_TREFOIL_1	SI GAA	9.07e-04	8	108	2	PS00025
Domain	Trefoil	SI GAA	9.07e-04	8	108	2	PF00088
Domain	P_trefoil_CS	SI GAA	9.07e-04	8	108	2	IPR017957
Domain	PHD	KDM5C NSD1 DIDO1 KDM5D	9.37e-04	75	108	4	PF00628
Domain	C2	CPNE8 CPNE9 PIK3C2A CPNE3 CC2D2A	9.84e-04	131	108	5	PF00168
Domain	Znf_PHD-finger	KDM5C NSD1 DIDO1 KDM5D	1.14e-03	79	108	4	IPR019787
Domain	P_TREFOIL_2	SI GAA	1.16e-03	9	108	2	PS51448
Domain	PD	SI GAA	1.16e-03	9	108	2	SM00018
Domain	C2	CPNE8 CPNE9 PIK3C2A CPNE3 CC2D2A	1.20e-03	137	108	5	SM00239
Domain	C2	CPNE8 CPNE9 PIK3C2A CPNE3 CC2D2A	1.41e-03	142	108	5	PS50004
Domain	-	CPNE8 CPNE9 PIK3C2A CPNE3 CC2D2A	1.69e-03	148	108	5	2.60.40.150
Domain	-	SI GAA	1.76e-03	11	108	2	4.10.110.10
Domain	P_trefoil_dom	SI GAA	2.11e-03	12	108	2	IPR000519
Domain	UBX	UBXN2B NSFL1C	2.11e-03	12	108	2	SM00166
Domain	-	COL11A1 ADGRV1 LGALS7 LRBA	2.25e-03	95	108	4	2.60.120.200
Domain	UBX_dom	UBXN2B NSFL1C	2.48e-03	13	108	2	IPR001012
Domain	UBX	UBXN2B NSFL1C	2.48e-03	13	108	2	PF00789
Domain	UBX	UBXN2B NSFL1C	2.48e-03	13	108	2	PS50033
Domain	C2_dom	CPNE8 CPNE9 PIK3C2A CPNE3 CC2D2A	2.65e-03	164	108	5	IPR000008
Domain	-	KDM5C KDM5D	3.31e-03	15	108	2	1.10.150.60
Domain	BRIGHT	KDM5C KDM5D	3.31e-03	15	108	2	SM00501
Domain	ARID_dom	KDM5C KDM5D	3.31e-03	15	108	2	IPR001606
Domain	ARID	KDM5C KDM5D	3.31e-03	15	108	2	PS51011
Domain	ARID	KDM5C KDM5D	3.31e-03	15	108	2	PF01388
Domain	cNMP-bd_CS	CNGB1 CNGA2	3.77e-03	16	108	2	IPR018488
Domain	-	TRRAP PIK3C2A	3.77e-03	16	108	2	1.10.1070.11
Domain	PI3Kc	TRRAP PIK3C2A	3.77e-03	16	108	2	SM00146
Domain	Gal_mutarotase_SF_dom	SI GAA	4.26e-03	17	108	2	IPR011013
Domain	Ubiquitin-rel_dom	UBXN2B NSFL1C PIK3C2A SUMO2 GABPA	4.33e-03	184	108	5	IPR029071
Domain	FN3	COL6A3 FN1 FNDC3A ITGB4 ROBO3	4.43e-03	185	108	5	SM00060
Domain	PI3_PI4_kinase	TRRAP PIK3C2A	4.77e-03	18	108	2	PF00454
Domain	PI3_4_KINASE_1	TRRAP PIK3C2A	4.77e-03	18	108	2	PS00915
Domain	PI3_4_KINASE_2	TRRAP PIK3C2A	4.77e-03	18	108	2	PS00916
Domain	PI3/4_kinase_cat_dom	TRRAP PIK3C2A	4.77e-03	18	108	2	IPR000403
Domain	PI3_4_KINASE_3	TRRAP PIK3C2A	4.77e-03	18	108	2	PS50290
Pubmed	Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry.	COL6A3 CPNE9 FN1 ITGB4 QSOX1 FREM2 FCGBP B3GNT2 GAA CNDP1	1.19e-08	257	112	10	16335952
Pubmed	The characterization of the Olf-1/EBF-like HLH transcription factor family: implications in olfactory gene regulation and neuronal development.	EBF3 EBF1 EBF2	3.25e-08	3	112	3	9151732
Pubmed	Cloning and functional characterization of Roaz, a zinc finger protein that interacts with O/E-1 to regulate gene expression: implications for olfactory neuronal development.	EBF3 EBF1 EBF2	1.30e-07	4	112	3	9151733
Pubmed	Cloning of a novel Olf-1/EBF-like gene, O/E-4, by degenerate oligo-based direct selection.	EBF3 EBF1 EBF2	1.30e-07	4	112	3	12139918
Pubmed	Formation of whisker-related principal sensory nucleus-based lemniscal pathway requires a paired homeodomain transcription factor, Drg11.	EBF3 EBF1 EBF2	3.24e-07	5	112	3	12917357
Pubmed	Expression patterns of the coe/ebf transcription factor genes during chicken and mouse limb development.	EBF3 EBF1 EBF2	3.24e-07	5	112	3	15261831
Pubmed	Family of Ebf/Olf-1-related genes potentially involved in neuronal differentiation and regional specification in the central nervous system.	EBF3 EBF1 EBF2	6.46e-07	6	112	3	9389446
Pubmed	Ebf factors and MyoD cooperate to regulate muscle relaxation via Atp2a1.	EBF3 EBF1 EBF2	1.13e-06	7	112	3	24786561
Pubmed	Genetic disruptions of O/E2 and O/E3 genes reveal involvement in olfactory receptor neuron projection.	EBF3 EBF1 EBF2	1.80e-06	8	112	3	14993187
Pubmed	In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine.	NID2 COL6A3 CPNE8 CPNE9 FN1 SI ITGAM CYFIP2 QSOX1 FREM2 MGAT1 FCGBP MTHFD1 CPNE3 GAA	1.84e-06	1070	112	15	23533145
Pubmed	The copines, a novel class of C2 domain-containing, calcium-dependent, phospholipid-binding proteins conserved from Paramecium to humans.	CPNE8 CPNE9 CPNE3	2.69e-06	9	112	3	9430674
Pubmed	Regulation of endodermal differentiation of human embryonic stem cells through integrin-ECM interactions.	COL11A1 FN1 ITGAM ITGB4	3.42e-06	32	112	4	23154389
Pubmed	Multiplexed barcoded CRISPR-Cas9 screening enabled by CombiGEM.	KDM4C KDM5C NSD1 KDM5D	3.88e-06	33	112	4	26864203
Pubmed	Control of hindbrain motor neuron differentiation by the homeobox gene Phox2b.	EBF3 EBF1 EBF2	5.26e-06	11	112	3	10704382
Pubmed	An ancient role for collier/Olf/Ebf (COE)-type transcription factors in axial motor neuron development.	EBF3 EBF1 EBF2	7.00e-06	12	112	3	30658714
Pubmed	Transient and lineage-restricted requirement of Ebf3 for sternum ossification.	EBF3 EBF1 EBF2	7.00e-06	12	112	3	32398354
Pubmed	Control of the migratory pathway of facial branchiomotor neurones.	EBF3 EBF1 EBF2	9.08e-06	13	112	3	11076752
Pubmed	Early B-cell factors 2 and 3 (EBF2/3) regulate early migration of Cajal-Retzius cells from the cortical hem.	EBF3 EBF1 EBF2	9.08e-06	13	112	3	22421355
Pubmed	Mouse H-Y encoding Smcy gene and its X chromosomal homolog Smcx.	KDM5C KDM5D	1.03e-05	2	112	2	10441747
Pubmed	Inefficient purifying selection: the mammalian Y chromosome in the rodent genus Mus.	KDM5C KDM5D	1.03e-05	2	112	2	16416087
Pubmed	Early B Cell Factor Activity Controls Developmental and Adaptive Thermogenic Gene Programming in Adipocytes.	EBF1 EBF2	1.03e-05	2	112	2	32130892
Pubmed	Mutations of histone demethylase genes encoded by X and Y chromosomes, Kdm5c and Kdm5d, lead to noncompaction cardiomyopathy in mice.	KDM5C KDM5D	1.03e-05	2	112	2	32081420
Pubmed	The heteromeric transcription factor GABP activates the ITGAM/CD11b promoter and induces myeloid differentiation.	ITGAM GABPA	1.03e-05	2	112	2	26170143
Pubmed	Critical role for Ebf1 and Ebf2 in the adipogenic transcriptional cascade.	EBF1 EBF2	1.03e-05	2	112	2	17060461
Pubmed	A mouse Y chromosome gene encoded by a region essential for spermatogenesis and expression of male-specific minor histocompatibility antigens.	KDM5C KDM5D	1.03e-05	2	112	2	7524912
Pubmed	Analysis of mutation rates in the SMCY/SMCX genes shows that mammalian evolution is male driven.	KDM5C KDM5D	1.03e-05	2	112	2	9060413
Pubmed	Ebf2 is required for development of dopamine neurons in the midbrain periaqueductal gray matter of mouse.	EBF3 EBF1 EBF2	1.44e-05	15	112	3	25762221
Pubmed	Evolutionary strata on the mouse X chromosome correspond to strata on the human X chromosome.	USP9X KDM5C KDM5D	1.44e-05	15	112	3	14762062
Pubmed	Identification of Jmjd3 as an Essential Epigenetic Regulator of Hox Gene Temporal Collinear Activation for Body Axial Patterning in Mice.	KDM4C KDM5C NSD1 KDM5D	1.93e-05	49	112	4	34368113
Pubmed	The Transcription Factors EBF1 and EBF2 Are Positive Regulators of Myelination in Schwann Cells.	EBF3 EBF1 EBF2	2.14e-05	17	112	3	27889898
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	SART3 UXS1 EMC1 ASCC1 NSD1 ZNF622 DIDO1 TRRAP CYFIP2 MGAT1 PIK3C2A MTHFD1 PWP2 XRN1 TMEM266 GABPA	2.47e-05	1497	112	16	31527615
Pubmed	Sex differences in sex chromosome gene expression in mouse brain.	USP9X KDM5C KDM5D	2.56e-05	18	112	3	12023983
Pubmed	Interaction of the leucine-rich repeats of polycystin-1 with extracellular matrix proteins: possible role in cell proliferation.	FN1 PKD1	3.08e-05	3	112	2	11752017
Pubmed	Suppressor of cytokine signaling-1 reduces high glucose-induced TGF-beta1 and fibronectin synthesis in human mesangial cells.	FN1 SOCS1	3.08e-05	3	112	2	18801363
Pubmed	Altered cofactor regulation with disease-associated p97/VCP mutations.	UBXN2B NSFL1C	3.08e-05	3	112	2	25775548
Pubmed	HAT cofactor Trrap regulates the mitotic checkpoint by modulation of Mad1 and Mad2 expression.	TRRAP MAD2L1	3.08e-05	3	112	2	15549134
Pubmed	Golgi self-correction generates bioequivalent glycans to preserve cellular homeostasis.	MGAT1 B3GNT2	3.08e-05	3	112	2	27269286
Pubmed	Age-Progressive and Gender-Dependent Bone Phenotype in Mice Lacking Both Ebf1 and Ebf2 in Prrx1-Expressing Mesenchymal Cells.	EBF1 EBF2	3.08e-05	3	112	2	35137272
Pubmed	Identification of a mouse male-specific transplantation antigen, H-Y.	KDM5C KDM5D	3.08e-05	3	112	2	7544442
Pubmed	The UBXN-2/p37/p47 adaptors of CDC-48/p97 regulate mitosis by limiting the centrosomal recruitment of Aurora A.	UBXN2B NSFL1C	3.08e-05	3	112	2	23649807
Pubmed	Molecular cloning and mapping of a novel developmentally regulated human C2H2-type zinc finger.	ZNF211 CPS1	3.08e-05	3	112	2	9096115
Pubmed	Biochemical characterization of copine: a ubiquitous Ca2+-dependent, phospholipid-binding protein.	CPNE8 CPNE9	3.08e-05	3	112	2	11123945
Pubmed	New nomenclature for chromatin-modifying enzymes.	KDM4C KDM5C NSD1 KDM5D	3.53e-05	57	112	4	18022353
Pubmed	A key role for the HLH transcription factor EBF2COE2,O/E-3 in Purkinje neuron migration and cerebellar cortical topography.	EBF3 EBF1 EBF2	3.56e-05	20	112	3	16774995
Pubmed	The Tbr2 Molecular Network Controls Cortical Neuronal Differentiation Through Complementary Genetic and Epigenetic Pathways.	EBF3 EBF1 EBF2	4.14e-05	21	112	3	27600842
Pubmed	A dual-activity topoisomerase complex regulates mRNA translation and turnover.	NSD1 TRRAP ITGB4 LPIN3 MGAT1 ZNF276 SUGP2 PKD1 KAZALD1 LRBA MYRF TRAPPC9 SPATA13	5.82e-05	1105	112	13	35748872
Pubmed	Simultaneous Loss of NCKX4 and CNG Channel Desensitization Impairs Olfactory Sensitivity.	CNGB1 CNGA2	6.14e-05	4	112	2	28053034
Pubmed	Novel JARID1C/SMCX mutations in patients with X-linked mental retardation.	KDM5C KDM5D	6.14e-05	4	112	2	16541399
Pubmed	Fibronectin maintains survival of mouse natural killer (NK) cells via CD11b/Src/beta-catenin pathway.	FN1 ITGAM	6.14e-05	4	112	2	19738028
Pubmed	The X-linked mental retardation gene SMCX/JARID1C defines a family of histone H3 lysine 4 demethylases.	KDM5C KDM5D	6.14e-05	4	112	2	17320160
Pubmed	Regulated expression of tissue transglutaminase in Swiss 3T3 fibroblasts: effects on the processing of fibronectin, cell attachment, and cell death.	FN1 TGM1	6.14e-05	4	112	2	9511731
Pubmed	A novel X gene with a widely transcribed Y-linked homologue escapes X-inactivation in mouse and human.	KDM5C KDM5D	6.14e-05	4	112	2	7951230
Pubmed	Loss of CNGB1 protein leads to olfactory dysfunction and subciliary cyclic nucleotide-gated channel trapping.	CNGB1 CNGA2	6.14e-05	4	112	2	16980309
Pubmed	EGF potentiated oncogenesis requires a tissue transglutaminase-dependent signaling pathway leading to Src activation.	FN1 TGM1	6.14e-05	4	112	2	20080707
Pubmed	X- and Y-Linked Chromatin-Modifying Genes as Regulators of Sex-Specific Cancer Incidence and Prognosis.	KDM5C KDM5D	6.14e-05	4	112	2	32732223
Pubmed	KDM4C-mediated senescence defense is a targetable vulnerability in gastric cancer harboring TP53 mutations.	KDM4C CDK2	6.14e-05	4	112	2	37848946
Pubmed	Early B-cell factors are required for specifying multiple retinal cell types and subtypes from postmitotic precursors.	EBF3 EBF1 EBF2	6.26e-05	24	112	3	20826655
Pubmed	Proteomic analysis of human parotid gland exosomes by multidimensional protein identification technology (MudPIT).	UXS1 METRNL EVPL ITGB4 TGM1 MGAT1 CPNE3 VWA2	6.41e-05	417	112	8	19199708
Pubmed	Lmx1b controls the differentiation and migration of the superficial dorsal horn neurons of the spinal cord.	EBF3 EBF1 EBF2	7.10e-05	25	112	3	15229182
Pubmed	Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.	NID2 COL6A3 COL11A1 FN1 ITIH5	7.87e-05	135	112	5	28675934
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	SART3 DIDO1 TRRAP SUGP2 CPNE3 RAVER1	8.19e-05	220	112	6	35785414
Pubmed	Integrative genomic analysis of early neurogenesis reveals a temporal genetic program for differentiation and specification of preplate and Cajal-Retzius neurons.	EBF3 EBF1 EBF2	8.99e-05	27	112	3	33760820
Pubmed	The N6-methyladenosine-mediated lncRNA WEE2-AS1 promotes glioblastoma progression by stabilizing RPN2.	EMC1 USP9X DIDO1 CYFIP2 SH3PXD2A PALS2 MAD2L1	9.14e-05	325	112	7	36168628
Pubmed	Defining the human deubiquitinating enzyme interaction landscape.	SART3 TRRAP LGALS7 UBXN2B NSFL1C PMPCA PIK3C2A PWP2 CPNE3 SUMO2 GPRASP2 MAD2L1	9.91e-05	1005	112	12	19615732
Pubmed	Genetic link between renal birth defects and congenital heart disease.	FREM2 PKD1 CC2D2A	1.00e-04	28	112	3	27002738
Pubmed	Identification of Tapr (an airway hyperreactivity regulatory locus) and the linked Tim gene family.	EBF1 CYFIP2	1.02e-04	5	112	2	11725301
Pubmed	Adhesion molecules involved in macrophage responses to Wallerian degeneration in the murine peripheral nervous system.	FN1 ITGAM	1.02e-04	5	112	2	9421166
Pubmed	Fibulin-1 acts as a cofactor for the matrix metalloprotease ADAMTS-1.	FN1 DCHS1	1.02e-04	5	112	2	16061471
Pubmed	Mapping of binding sites for nidogens, fibulin-2, fibronectin and heparin to different IG modules of perlecan.	NID2 FN1	1.02e-04	5	112	2	11493006
Pubmed	Stem cell niche-specific Ebf3 maintains the bone marrow cavity.	EBF3 EBF1	1.02e-04	5	112	2	29563184
Pubmed	Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.	SART3 ESS2 EBF3 KDM5C CPS1 TRRAP CYFIP2 TGM1 SUGP2 GAA GABPA	1.04e-04	857	112	11	25609649
Pubmed	EBF2 determines and maintains brown adipocyte identity.	EBF3 EBF1 EBF2	1.12e-04	29	112	3	23499423
Pubmed	Multimodal Hox5 activity generates motor neuron diversity.	EBF3 EBF1 EBF2	1.12e-04	29	112	3	39289460
Pubmed	Basement membrane assembly of the integrin α8β1 ligand nephronectin requires Fraser syndrome-associated proteins.	NID2 FN1 FREM2	1.12e-04	29	112	3	22613833
Pubmed	USP45 and Spindly are part of the same complex implicated in cell migration.	CPNE8 CPNE9 USP9X TRRAP MTHFD1 CPNE3	1.18e-04	235	112	6	30258100
Pubmed	MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.	ESS2 DIDO1 TRRAP SUGP2 PWP2 GABPA RAVER1	1.19e-04	339	112	7	30415952
Pubmed	Human Immunodeficiency Virus Type 1 Vpr Mediates Degradation of APC1, a Scaffolding Component of the Anaphase-Promoting Complex/Cyclosome.	KDM5C NSD1 XRN1 LRBA MAD2L1 RAVER1	1.38e-04	242	112	6	34011540
Pubmed	DEL-1 promotes macrophage efferocytosis and clearance of inflammation.	ITGAM NR1H2	1.53e-04	6	112	2	30455459
Pubmed	The type XIII collagen ectodomain is a 150-nm rod and capable of binding to fibronectin, nidogen-2, perlecan, and heparin.	NID2 FN1	1.53e-04	6	112	2	11956183
Pubmed	cGMP and cyclic nucleotide-gated channels participate in mouse sperm capacitation.	CNGB1 CNGA2	1.53e-04	6	112	2	22192355
Pubmed	A novel fibronectin receptor with an unexpected subunit composition (alpha v beta 1).	FN1 ITGB4	1.53e-04	6	112	2	2138612
Pubmed	The transcription factor, Lmx1b, is necessary for the development of the principal trigeminal nucleus-based lemniscal pathway.	EBF3 EBF1	1.53e-04	6	112	2	20621716
Pubmed	Genetic variants associated with disordered eating.	SH2D3C QSOX1 GADL1 SOCS1	1.54e-04	83	112	4	23568457
Pubmed	Circular rapid amplification of cDNA ends for high-throughput extension cloning of partial genes.	USP9X DIDO1 ADGRV1 FCGBP	1.61e-04	84	112	4	15203218
Pubmed	Comprehensive proteomic characterization of stem cell-derived extracellular matrices.	NID2 COL6A3 COL11A1 FN1	1.77e-04	86	112	4	28327460
Pubmed	TRIM65 regulates microRNA activity by ubiquitination of TNRC6.	SART3 ZNF622 TMEM43 CPS1 TRRAP IQSEC1 GPRASP2	1.84e-04	364	112	7	24778252
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	KDM5C DIDO1 TRRAP QSOX1 NSFL1C SUGP2 IQSEC1 CDK2 MOCOS RAVER1	2.07e-04	774	112	10	15302935
Pubmed	FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.	ZNF211 FN1 USP9X KDM5C ASCC1 TRRAP MTHFD1 LRBA	2.13e-04	497	112	8	36774506
Pubmed	Genome-wide association meta-analysis of human longevity identifies a novel locus conferring survival beyond 90 years of age.	EBF1 CSRNP3	2.14e-04	7	112	2	24688116
Pubmed	Potent and Selective KDM5 Inhibitor Stops Cellular Demethylation of H3K4me3 at Transcription Start Sites and Proliferation of MM1S Myeloma Cells.	KDM4C KDM5C	2.14e-04	7	112	2	28262558
Pubmed	alpha3beta1 Integrin is required for normal development of the epidermal basement membrane.	FN1 ITGB4	2.14e-04	7	112	2	9151677
Pubmed	Genome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13).	PTPRE TENM3 TRAPPC9	2.53e-04	38	112	3	22952603
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	SART3 EMC1 DIDO1 LPIN3 FREM2 CPNE3 XRN1 MOCOS RAVER1	2.62e-04	650	112	9	38777146
Pubmed	New interaction partners for Nek4.1 and Nek4.2 isoforms: from the DNA damage response to RNA splicing.	COL6A3 CPNE9 SH2D3C MINDY2 ITGB4 QSOX1 SH3PXD2A XRN1	2.64e-04	513	112	8	25798074
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	SART3 FN1 USP9X NSD1 DIDO1 TRRAP SUGP2 PWP2 XRN1	2.71e-04	653	112	9	22586326
Pubmed	Mapping of Col3a1 and Col6a3 to proximal murine chromosome 1 identifies conserved linkage of structural protein genes between murine chromosome 1 and human chromosome 2q.	COL6A3 FN1	2.84e-04	8	112	2	1981051
Pubmed	The leucine-rich repeat protein PRELP binds perlecan and collagens and may function as a basement membrane anchor.	NID2 FN1	2.84e-04	8	112	2	11847210
Pubmed	Reduced polyalanine-expanded Arx mutant protein in developing mouse subpallium alters Lmo1 transcriptional regulation.	EBF3 KDM5C	2.84e-04	8	112	2	24122442
Pubmed	TWIST1 Homodimers and Heterodimers Orchestrate Lineage-Specific Differentiation.	EBF3 EBF1	2.84e-04	8	112	2	32179550
Pubmed	SMOC1 is a tenascin-C interacting protein over-expressed in brain tumors.	NID2 FN1	2.84e-04	8	112	2	21349332
GeneFamily	Copines	CPNE8 CPNE9 CPNE3	4.21e-06	9	68	3	829
GeneFamily	Intermediate filament family orphans	IFFO1 IFFO2	1.39e-05	2	68	2	614
GeneFamily	PHD finger proteins\|Lysine demethylases	KDM4C KDM5C KDM5D	9.73e-05	24	68	3	485
GeneFamily	PHD finger proteins	KDM5C NSD1 DIDO1 KDM5D	3.67e-04	90	68	4	88
GeneFamily	Cyclic nucleotide gated channels	CNGB1 CNGA2	6.15e-04	10	68	2	250
GeneFamily	UBX domain containing	UBXN2B NSFL1C	1.06e-03	13	68	2	364
GeneFamily	AT-rich interaction domain containing	KDM5C KDM5D	1.42e-03	15	68	2	418
GeneFamily	Fibronectin type III domain containing	FN1 FNDC3A ITGB4 ROBO3	3.10e-03	160	68	4	555
GeneFamily	SH2 domain containing	SH2D3C SOCS1 SHE	6.52e-03	101	68	3	741
Coexpression	DESCARTES_FETAL_LIVER_MESOTHELIAL_CELLS	CPAMD8 COL11A1 EVPL ITGB4 TGM1 FREM2 TENM3 GADL1 MYRF DISP1	9.87e-07	313	112	10	M40228
CoexpressionAtlas	ratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500_k-means-cluster#5	COL6A3 COL11A1 FN1 EBF3 EBF1 EBF2 KAZALD1	2.28e-06	116	109	7	ratio_EB_vs_SC_500_K5
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	NID2 COL6A3 COL11A1 FN1 ADAMTSL3 EBF2 TENM3 KAZALD1 DISP1	1.92e-09	198	112	9	9541d68a1a6247dbd7161a62644eea6527c2c8ff
ToppCell	facs-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l17\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	NID2 COL6A3 STAC3 EBF1 ITIH5 EBF2 CSRNP3 GPR153	1.87e-08	180	112	8	39ae8586efd91536e9ac6408d26de7e6d6237c41
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	CPAMD8 FN1 SH2D3C MYRIP EBF1 ITGB4 CC2D2B SHE	3.49e-08	195	112	8	77e47d2e8b3eb7f7c9620369ccaf87581f923bdb
ToppCell	Tracheal-NucSeq-Stromal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL6A3 CPAMD8 COL11A1 FN1 EBF3 EBF1 ADAMTSL3 TENM3	4.24e-08	200	112	8	c318d14bd6fd6f42c597eb55ac9e2f48008aeb9b
ToppCell	PND03-Endothelial-Endothelial_blood-vessel-Macrovascular_EC-AEC-AEC_prolif\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ITGB4 NSFL1C PWP2 DCHS1 SHE SUMO2 RAVER1	2.06e-07	165	112	7	62457b7b74c6eae42d91d65e7dc6df6bf8e061f7
ToppCell	COVID-19-Heart-Fib_+_EC_+_Pericyte\|COVID-19 / Disease (COVID-19 only), tissue and cell type	NID2 COL6A3 FN1 EBF3 EBF1 ADAMTSL3 EBF2	4.00e-07	182	112	7	fbd5e332df73bf7141c822fa67b76367dc962017
ToppCell	COVID-19-Heart-EC_3\|COVID-19 / Disease (COVID-19 only), tissue and cell type	EBF3 SH2D3C MYRIP EBF1 CC2D2B PIK3C2A SHE	4.15e-07	183	112	7	ff95382cfed592190d0636d2b750328471f82e0d
ToppCell	facs-Limb_Muscle-Muscle_forelimb_and_hindlimb-18m-Mesenchymal-mesenchymal_stem_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 METRNL EBF1 ADAMTSL3 ITIH5 EBF2	4.63e-07	186	112	7	a7ab70b049742dfe7ee30557031bfac6412edf52
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_myocytic-mes_pericyte_(14)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	NID2 COL6A3 FN1 SH2D3C EBF1 ADAMTSL3 TMEM266	5.16e-07	189	112	7	9c2492c38f27e4c699b40680652e4c64911cce52
ToppCell	facs-Limb_Muscle-ForelimbandHindlimb-3m-Mesenchymal-mesenchymal_stem_cell\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NID2 COL6A3 FN1 EBF1 ITIH5 EBF2 GPR153	5.73e-07	192	112	7	beac6b3c191b11add8e39e8d04562b478ea8929e
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Descending_Vasa_Recta_Endothelial_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C EBF1 ITIH5 CC2D2B EFR3B SHE	5.73e-07	192	112	7	56b021c297a21dff357531f21e2464f85186106d
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Vascular-Mural_cell-SMC_prolif-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	NID2 MAGEA12 FN1 EBF1 ADAMTSL3 EBF2 CDK2	6.15e-07	194	112	7	78dcb9d48259afabe73b41c5508a73a8d62339a4
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Descending_Vasa_Recta_Endothelial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CPNE8 EBF3 SH2D3C EBF1 ITIH5 PTPRE SHE	6.36e-07	195	112	7	d35102f95bb1e419d2df05ff0a01b6c5c923acef
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Vascular-Mural_cell-Scavenging_pericyte\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	NID2 MAGEA12 FN1 EBF1 ADAMTSL3 ITIH5 SH3PXD2A	6.58e-07	196	112	7	cb61757646653f89faba503cb5d99e5dd5197b4c
ToppCell	Smart-start-Cell-Wel_seq-Non-neoplastic-Vascular-Mural_cell-Scavenging_pericyte-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	NID2 MAGEA12 FN1 EBF1 ADAMTSL3 ITIH5 SH3PXD2A	6.58e-07	196	112	7	44e2df1b61e3819eae7e482bef0a733afe852d67
ToppCell	Tracheal-NucSeq-Stromal-Fibroblastic-Fibro_perichondrial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL6A3 CPAMD8 COL11A1 FN1 EBF1 ADAMTSL3 TENM3	7.54e-07	200	112	7	a4ec0e80f5422b91b85264a9bb74568dd577e285
ToppCell	Bronchial-NucSeq-Stromal-Chondrocytic\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	CPAMD8 COL11A1 FN1 EBF3 ADAMTSL3 TENM3 PALS2	7.54e-07	200	112	7	b7b9441fa7ab0d43741a2ebd5ec1a48d537c6d47
ToppCell	Bronchial-NucSeq-Stromal-Chondrocytic-Chondrocyte\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	CPAMD8 COL11A1 FN1 EBF3 ADAMTSL3 TENM3 PALS2	7.54e-07	200	112	7	7c673ad0ea503ebd196579684d25d5f9e6a41030
ToppCell	PND01-03-samps-Mesenchymal-Myofibroblast-myofibroblast_-_immature_2\|PND01-03-samps / Age Group, Lineage, Cell class and subclass	ITIH5 LGALS7 RCC1L KAZALD1 CNGB1 GPRASP2	1.68e-06	143	112	6	abe6ec0f6956b87f394d537926eb2427fcfad93f
ToppCell	PND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-Mesothelial\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	COL11A1 LGALS7 FREM2 TENM3 PALS2 MYRF	5.06e-06	173	112	6	30d67738633493d47f06ae452424382f069b6c0a
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-mesothelial_cell-Mesothelium_(RGS5+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SERPINE3 COL11A1 ITIH5 TGM1 FREM2 MYRF	5.40e-06	175	112	6	f5451c29c487b998778e50349b3d774d5e20fd28
ToppCell	3'-Broncho-tracheal-Immune_Myeloid-Myeloid_macrophage-alveolar_macrophage-Alveolar_macrophages-Alveolar_macrophages_L.1.0.3.1\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	FN1 STAC3 ITIH5 QSOX1 GLTPD2 GAA	5.96e-06	178	112	6	0b398656f26c4061b11ccf98908d0e2e1367585a
ToppCell	TCGA-Liver-Primary_Tumor-Hepatocellular_Carcinoma-Hepatocellular_Carcinoma-1\|TCGA-Liver / Sample_Type by Project: Shred V9	COL11A1 MINDY2 ITGB4 ITIH5 CC2D2A RAVER1	5.96e-06	178	112	6	51c59dabf2d7aef1b1964f6f766d5ec07ef90f5a
ToppCell	PND03-Mesenchymal-Mesenchymal_structural-Fibroblastic-Mesothelial-Mesothelial_G2M\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	COL11A1 ADAMTSL3 LGALS7 FREM2 TENM3 MYRF	5.96e-06	178	112	6	c77a1d1a9aef0ab51b4408b9e84f201219788ca2
ToppCell	PND01-03-samps-Mesenchymal-Myofibroblast\|PND01-03-samps / Age Group, Lineage, Cell class and subclass	COL6A3 COL11A1 EBF3 ITIH5 TENM3 GPRASP2	6.77e-06	182	112	6	812dac35b9aa05be48258082e007f6c00e7b4dd8
ToppCell	facs-Mammary_Gland-Mammary_Gland-18m-Mesenchymal\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 METRNL EBF1 ITIH5 EBF2	6.98e-06	183	112	6	5cfcd589a480e67654d3d94e71916f122150db10
ToppCell	facs-Mammary_Gland-Mammary_Gland-18m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 METRNL EBF1 ITIH5 EBF2	6.98e-06	183	112	6	c3ea8d3b916ffcaca3156e0d77a952724554c4ab
ToppCell	facs-Mammary_Gland-Mammary_Gland-18m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 METRNL EBF1 ITIH5 EBF2	6.98e-06	183	112	6	81003ddc24164959dd41bb12fcac72638789b8f2
ToppCell	Fetal_29-31_weeks-Endothelial-endothelial_cell_of_lymph_vessel-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	CPNE8 SH2D3C ITGB4 PTPRE SHE ROBO3	6.98e-06	183	112	6	bc98df870de65aff6dab295c24cbc199c7f2aa15
ToppCell	(2)_5-FU-(4)_COL2.3+_osteoblasts\|World / Stress and Cell class	FN1 METRNL QSOX1 SH3PXD2A PKD1 KAZALD1	7.20e-06	184	112	6	684d05340a3dfb8aa08b881516a37f9627a10448
ToppCell	facs-Mammary_Gland-Mammary_Gland-3m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 METRNL EBF1 ITIH5 EBF2	7.43e-06	185	112	6	3cd0686a14e734a0f243070ab939adcb4c454478
ToppCell	facs-Mammary_Gland-Mammary_Gland-3m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 METRNL EBF1 ITIH5 EBF2	7.43e-06	185	112	6	00258f458cbf6d36449db95528a6b5038d731d2d
ToppCell	facs-Mammary_Gland-Mammary_Gland-3m-Mesenchymal\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 METRNL EBF1 ITIH5 EBF2	7.43e-06	185	112	6	a94694e226856bc5b168464f52d76004145717a5
ToppCell	droplet-Kidney-KIDNEY-30m-Epithelial-Pecam____Kidney_cortex_artery_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	FN1 MYRIP ITGB4 DCHS1 SHE KAZALD1	7.43e-06	185	112	6	f98af3146ec2f44c30d31a662fb9c4fa3ca4f706
ToppCell	COVID-19-Heart-Fib_2\|COVID-19 / Disease (COVID-19 only), tissue and cell type	COL6A3 FN1 EBF3 EBF1 ADAMTSL3 EBF2	7.43e-06	185	112	6	8f95d8e591bf7379d13f5a0545b0cb49e2b1ab5d
ToppCell	PCW_13-14-Epithelial-Epithelial_alveolar-distal-epi_SOX9^high_Etv5^high_distal_(10)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL11A1 EVPL ADGRV1 CYFIP2 FREM2 FCGBP	7.66e-06	186	112	6	bb0bfe9a015151be08a6ffc5d82896d0556d76de
ToppCell	Fetal_29-31_weeks-Mesenchymal-pericyte_cell-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	COL6A3 UXS1 EBF1 ADAMTSL3 ITIH5 EBF2	7.90e-06	187	112	6	fa01a61bfd13feb033ba1e35cf513707b1bff8c8
ToppCell	PCW_10-12-Epithelial-Epithelial_alveolar-distal-epi_SOX9^high_Etv5^high_distal_(10)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL11A1 EVPL ADGRV1 CYFIP2 FREM2 VWA2	7.90e-06	187	112	6	db2974e2e87ac9f1c2407a371d5ed89af09fc9b7
ToppCell	3'-GW_trimst-1-LargeIntestine-Mesenchymal-mesothelial_cell-Mesothelium\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SERPINE3 COL11A1 ITIH5 TGM1 MYRF DISP1	8.14e-06	188	112	6	00c5259bcb83218b7d44f4d585d9b68ef49763ab
ToppCell	droplet-Kidney-nan-3m-Epithelial-Pecam____Kidney_cortex_artery_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	FN1 MYRIP ITGB4 EFR3B SHE KAZALD1	8.14e-06	188	112	6	ec0e241de2c8310b4417b9d4e2420d7a1662f1c0
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NID2 COL6A3 EBF3 EBF1 ADAMTSL3 EBF2	8.14e-06	188	112	6	ce85a56ac27a6432421dde93a1bafa8b943244b9
ToppCell	COVID-19-Heart-Fib_1\|COVID-19 / Disease (COVID-19 only), tissue and cell type	NID2 COL6A3 EBF3 EBF1 ADAMTSL3 EBF2	8.14e-06	188	112	6	fe361215f4ba841aa5e1e581fb56f2f4d3ccd201
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Descending_Vasa_Recta_Endothelial_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 EBF3 SH2D3C EBF1 ITIH5 SHE	8.39e-06	189	112	6	6463890d8dbee4bc198f91628a5f784970de786a
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Ascending_Vasa_Recta_Endothelial_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	MYRIP EBF1 QSOX1 PTPRE PIK3C2A SHE	8.65e-06	190	112	6	656483751e4bf137e4e4bfb2a03a478a8f7fcb63
ToppCell	Adult-Mesenchymal-matrix_fibroblast_2_cell-D175\|Adult / Lineage, Cell type, age group and donor	NID2 COL6A3 EBF3 EBF1 ADAMTSL3 EBF2	8.65e-06	190	112	6	7dcca3469f3a3b70db0420cb94f7765f39492f06
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	NID2 COL6A3 EBF3 EBF1 ADAMTSL3 EBF2	8.65e-06	190	112	6	efb757f11c2809e66ddb48a5c84f5433f111cb7c
ToppCell	COVID-19-Heart-EC_3\|Heart / Disease (COVID-19 only), tissue and cell type	CPNE8 SH2D3C MYRIP CC2D2B PIK3C2A SHE	8.65e-06	190	112	6	78e7c502b0450c0b37652b1896a2a752fd8a2111
ToppCell	5'-GW_trimst-2-SmallIntestine-Mesenchymal-mesothelial_cell\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SERPINE3 COL11A1 TGM1 PDIA2 MYRF DISP1	8.91e-06	191	112	6	5343a527de6b0f852f45020a91f5b4869e78f13a
ToppCell	facs-Aorta-Heart-3m-Mesenchymal-fibroblast\|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	FN1 GPR153 GADL1 PALS2 MYRF GAA	8.91e-06	191	112	6	9214655dca96d766737c9f30b624d7fe7050342e
ToppCell	5'-GW_trimst-2-SmallIntestine-Mesenchymal-mesothelial_cell-Mesothelium\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SERPINE3 COL11A1 TGM1 PDIA2 MYRF DISP1	8.91e-06	191	112	6	a25a5f9a380031fdaf57677a079f97a90f0550c0
ToppCell	356C-Myeloid-Macrophage-FABP4+_Macrophage_proliferating_2\|356C / Donor, Lineage, Cell class and subclass (all cells)	CPNE9 FN1 CENPN STAC3 ITIH5 MAD2L1	8.91e-06	191	112	6	a2c235a55094e4fd5273d764c9e2967116b48c23
ToppCell	facs-Mammary_Gland-Mammary_Gland-21m-Epithelial-basal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CPNE8 ITGB4 LGALS7 PTPRE IFFO2 SOCS1	8.91e-06	191	112	6	8691eba35793e4e90f93d50c2145847ee51289f7
ToppCell	facs-Pancreas-Endocrine-3m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	USP9X CYFIP2 GIPR TENM3 MTHFD1 SH3PXD2A	9.18e-06	192	112	6	5b7093d5af5ae7b0e6d3a464cc56272440ecedad
ToppCell	droplet-Kidney-KIDNEY-30m-Mesenchymal-fibroblast\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 ADAMTSL3 ITIH5 EBF2 GPR153	9.18e-06	192	112	6	853a930e0641ffb50cbb4cef5837c70d75c3fc39
ToppCell	facs-Pancreas-Exocrine-3m-Mesenchymal-pancreatic_stellate_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NID2 COL6A3 ADAMTSL3 ITIH5 EBF2 GPR153	9.18e-06	192	112	6	8937a59f6bbe07f671bdabbd3707dc9c17a14cd9
ToppCell	renal_papilla_nuclei-Adult_normal_reference\|renal_papilla_nuclei / Celltypes from Cells and Nuclei per compartment and clinical group	CYFIP2 ITIH5 FCGBP TENM3 CSRNP3 LRBA	9.18e-06	192	112	6	6c106b91e46eabbe686a52a65a9c94ad9cbe9390
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_fibroblastic-mes_chondroblast_(18)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	COL11A1 EBF3 EBF1 ADAMTSL3 EBF2 TENM3	9.18e-06	192	112	6	d0649410cf5eacdb0c1dce70e37c7473ef5fddfa
ToppCell	facs-Pancreas-Exocrine-3m-Mesenchymal\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NID2 COL6A3 ADAMTSL3 ITIH5 EBF2 GPR153	9.18e-06	192	112	6	e4a7f2673f801b008ca67291db2fb2b9fd2955b8
ToppCell	facs-Pancreas-Exocrine-3m-Mesenchymal-pancreatic_stellate_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	NID2 COL6A3 ADAMTSL3 ITIH5 EBF2 GPR153	9.18e-06	192	112	6	ac1477433704573f95111eee6263b93668d2845e
ToppCell	droplet-Kidney-KIDNEY-30m-Mesenchymal-Stroma____fibroblast\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 ADAMTSL3 ITIH5 EBF2 GPR153	9.18e-06	192	112	6	d2c03490c5e835d0f0a732803093c64b8d4b4029
ToppCell	COVID-19-Heart-Fib_+_EC_+_Pericyte\|Heart / Disease (COVID-19 only), tissue and cell type	NID2 COL6A3 FN1 EBF1 ADAMTSL3 EBF2	9.18e-06	192	112	6	60b1312e84f6d6448365a952469c506c00b5fe93
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Afferent_/_Efferent_Arteriole_Endothelial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CPNE8 SH2D3C EBF1 ITIH5 PTPRE SHE	9.18e-06	192	112	6	3259cb89d6bcf0a3c6ff1f64d85e8a1f54124e91
ToppCell	droplet-Kidney-KIDNEY-30m-Mesenchymal\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 ADAMTSL3 ITIH5 EBF2 GPR153	9.18e-06	192	112	6	49281626ecad0456fdbded2378b7028d7b589686
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Descending_Vasa_Recta_Endothelial_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C MYRIP EBF1 ITGB4 SHE	9.46e-06	193	112	6	2e72309607902dabe3218888b22a77fe941f3570
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CPAMD8 FN1 SH2D3C EBF1 CC2D2B SHE	9.46e-06	193	112	6	6a623acd1adad9a78eddc32ffedb16352ad3fdfa
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Afferent_/_Efferent_Arteriole_Endothelial_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	CPAMD8 FN1 EBF1 ITGB4 CC2D2B SHE	9.46e-06	193	112	6	0b328f725f6feba263783eaca60c142e80df90f3
ToppCell	facs-Diaphragm-Limb_Muscle-3m-Mesenchymal-mesenchymal_stem_cell\|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 FN1 EBF1 ADAMTSL3 ITIH5 EBF2	9.46e-06	193	112	6	160691b671710be10220803d788c2c961c236af1
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C MYRIP EBF1 PIK3C2A SHE	9.46e-06	193	112	6	287e756d5fd3bd2931c168da24beaa0d02a350ae
ToppCell	facs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-tracheal_fibroblast_l20-25\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	FN1 METRNL EBF1 ADAMTSL3 ITIH5 DISP1	9.74e-06	194	112	6	7b6ec45adb7ece3c8a7b78c5782413b5825effe2
ToppCell	renal_papilla_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Descending_Vasa_Recta_Endothelial_Cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	EBF3 SH2D3C EBF1 ITIH5 EFR3B SHE	9.74e-06	194	112	6	a429d22c8c9d0fd3bfa9f877a6364cecad68db30
ToppCell	11.5-Distal-Mesenchymal-Pericyte\|Distal / Age, Tissue, Lineage and Cell class	NID2 SH2D3C EBF1 ADAMTSL3 EBF2 TMEM266	9.74e-06	194	112	6	08701590496cf85ff790e54a81493c61177e76ff
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Ascending_Vasa_Recta_Endothelial_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C MYRIP EBF1 PTPRE SHE	9.74e-06	194	112	6	fa6d51f36a3dae8763a595c20892987ed454c0f0
ToppCell	TCGA-Head_and_Esophagus-Primary_Tumor-Head_and_Neck_Carcinoma-Squamous_Cell_Carcinoma-8\|TCGA-Head_and_Esophagus / Sample_Type by Project: Shred V9	NID2 COL11A1 FN1 STAC3 EBF2 TENM3	9.74e-06	194	112	6	55b97095a7a17a312c616703d291738a0f806339
ToppCell	COVID-19-Heart-Fib_1\|Heart / Disease (COVID-19 only), tissue and cell type	COL6A3 FN1 EBF1 ADAMTSL3 ITIH5 EBF2	1.00e-05	195	112	6	f423baa36ac7cdc383c033e35a7d17e6bf913323
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-mesothelial_cell\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	SERPINE3 COL11A1 ITIH5 TGM1 MYRF DISP1	1.00e-05	195	112	6	8a9d05f7a5397836b7dfb8ae4f7c4896042ac0fe
ToppCell	Control-Lymphoid-Proliferating_CD4_T_cells\|Lymphoid / Condition, Lineage and Cell class	FN1 CENPN STAC3 CC2D2A GAA MAD2L1	1.00e-05	195	112	6	578bbb06a5476c08fc3b351cc580c551dfe53ae4
ToppCell	3'-Broncho-tracheal-Mesenchymal-Mesenchymal_Myocytic-pericyte_cell-Pericytes\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	NID2 COL6A3 UXS1 EBF1 ADAMTSL3 ITIH5	1.03e-05	196	112	6	9d18381d7aaa063094a5df769a04c73350471525
ToppCell	10x_3'_v2v3-Non-neoplastic-Vascular-Mural_cell-Pericyte\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	NID2 COL6A3 MAGEA12 FN1 EBF1 ITIH5	1.03e-05	196	112	6	7acd782a587b7d331517f60daa8b5c2177bedfc7
ToppCell	facs-Trachea\|facs / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	COL6A3 EBF1 ADAMTSL3 ITIH5 EBF2 TENM3	1.03e-05	196	112	6	8209f2b0f7efebaaf81d642d18a1aee8a9a8dcf6
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Endothelial-blood_vessel_endothelial_cell_of_kidney\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C MYRIP EBF1 PIK3C2A SHE	1.03e-05	196	112	6	22767bcf0095d9eb0cbed7cdc74e4d32d9357e1b
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C EBF1 PTPRE PIK3C2A SHE	1.03e-05	196	112	6	8f2031b1a9232c389517fbf3c29f47f9468b0077
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Endothelial\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C EBF1 PTPRE PIK3C2A SHE	1.03e-05	196	112	6	48b4a9cea97a55190217deaf51bf867608c5a9a7
ToppCell	facs-Trachea\|facs / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 EBF1 ADAMTSL3 ITIH5 EBF2 TENM3	1.03e-05	196	112	6	34020d6553309daa269dff05de0a8567211ea4d2
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Endothelial-blood_vessel_endothelial_cell_of_kidney\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C EBF1 PTPRE PIK3C2A SHE	1.03e-05	196	112	6	473980c827443464d08a0be28c53e3536369b12a
ToppCell	facs-Trachea-24m-Mesenchymal-fibroblast-fibroblast_of_trachea-tracheal_fibroblast_l20-25\|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	FN1 METRNL EBF1 ADAMTSL3 ITIH5 EBF2	1.03e-05	196	112	6	ed6047b48b6a96baa6a90c7af784e7c34b32824d
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Endothelial\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	FN1 SH2D3C MYRIP EBF1 PIK3C2A SHE	1.03e-05	196	112	6	adee900dcd16dbaba15c58bdcace09ba20214950
ToppCell	3'-Broncho-tracheal-Mesenchymal-Mesenchymal_Myocytic-pericyte_cell-Pericytes-Pericytes_L.2.3.1.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	NID2 COL6A3 UXS1 EBF1 ADAMTSL3 ITIH5	1.03e-05	196	112	6	a52cb512c6173be92aa9c4d96e2abbc32f45478d
ToppCell	3'-Broncho-tracheal-Mesenchymal-Mesenchymal_Myocytic-pericyte_cell\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	NID2 COL6A3 UXS1 EBF1 ADAMTSL3 ITIH5	1.03e-05	196	112	6	afddacc0fb8b9c73dad5333137deb471a6ebdc06
ToppCell	Cerebellum-Macroglia-OLIGODENDROCYTE\|Cerebellum / BrainAtlas - Mouse McCarroll V32	ADGRV1 ADAMTSL3 ITGB4 EPS8L3 MYRF	1.08e-05	115	112	5	15b2c11225802cc15c01165d84a755432f02d82f
ToppCell	droplet-Bladder-BLADDER-1m-Epithelial-bladder_cell\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A3 COL11A1 FN1 ITIH5 GPR153 KAZALD1	1.09e-05	198	112	6	8f202ed4692ea2c139ff05d4805c704ee4be095c
ToppCell	Bronchial_Biopsy-Endothelial-Endothelial\|Bronchial_Biopsy / Tissue, Lineage and Cell class of Lung Cells from 10X	EBF3 SH2D3C MYRIP EBF1 DCHS1 SHE	1.09e-05	198	112	6	d4a4e5c358d26d09ff27541ce49d0db75c1cd08e
ToppCell	COVID-19-kidney-Fibroblast-2\|kidney / Disease (COVID-19 only), tissue and cell type	NID2 COL6A3 FN1 EBF3 EBF1 TENM3	1.09e-05	198	112	6	ca26ca460856b1faaa3e83766da6abdf63af2b51
ToppCell	Bronchial_Biopsy-Endothelial\|Bronchial_Biopsy / Tissue, Lineage and Cell class of Lung Cells from 10X	EBF3 SH2D3C MYRIP EBF1 DCHS1 SHE	1.09e-05	198	112	6	ec80b05b8a1800c341b5741bf3e57213308398a7
ToppCell	Bronchial-10x5prime-Stromal-Peri/Epineurial_-NAF_epineurial\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	COL11A1 CPS1 ITGB4 EBF2 SH3PXD2A MOCOS	1.13e-05	199	112	6	a13f4b8a039304e685464cc8879659824cad5a3e
ToppCell	10x3'2.3-week_17-19-Mesenchymal_fibro-stroma-arteriolar_fibroblast\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	COL6A3 FN1 EBF3 ADAMTSL3 EBF2 CSRNP3	1.13e-05	199	112	6	95d95e9b7bd3933188998ae94986213eb0f1e5ea
ToppCell	10x_3'_v2v3-Non-neoplastic-Endothelial-Endothelial_immature-Tip-like-G\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	NID2 FN1 SH2D3C EBF1 ITIH5 SHE	1.13e-05	199	112	6	1295f34a350bf48987e2fad411aaac3630efd3f1
ToppCell	Bronchial-NucSeq-Stromal-Fibroblastic-Fibro_perichondrial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL6A3 COL11A1 FN1 EBF1 ADAMTSL3 TENM3	1.13e-05	199	112	6	abd6117f8a3d7e798d8471c16d97b34aaf50fc9c
ToppCell	proximal-3-mesenchymal-Pericyte\|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	NID2 COL6A3 UXS1 EBF1 ADAMTSL3 ITIH5	1.16e-05	200	112	6	98cbd0f4994e645f70c0bc5ebc1c3a3b28c6b67f
ToppCell	3'-Child04-06-SmallIntestine-Mesenchymal-fibroblastic-Stromal_1_(CCL11+)\|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL6A3 CPNE8 FN1 NKX2-3 ITIH5 QSOX1	1.16e-05	200	112	6	c0ea7cbc9d5e999530888145ce9e4c232fc874de
ToppCell	proximal-mesenchymal-Pericyte\|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	NID2 COL6A3 UXS1 EBF1 ADAMTSL3 ITIH5	1.16e-05	200	112	6	03119a979bc912a98e6fc87addcbc25d8ecf2fb0
Disease	RETINITIS PIGMENTOSA 45	COL11A1 CNGB1	1.35e-05	2	109	2	C3151066
Disease	persistent fetal circulation syndrome (is_implicated_in)	CPS1 ITGAM	4.05e-05	3	109	2	DOID:13042 (is_implicated_in)
Disease	syndromic X-linked intellectual disability Claes-Jensen type (implicated_via_orthology)	KDM5C KDM5D	8.07e-05	4	109	2	DOID:0060809 (implicated_via_orthology)
Disease	cystatin C measurement	NSD1 FNDC3A ADGRV1 CPS1 EBF2 ZNF276 PIK3C2A TMEM266	1.27e-04	402	109	8	EFO_0004617
Disease	intellectual disability (implicated_via_orthology)	KDM5C KDM5D GPRASP2 TRAPPC9	1.75e-04	75	109	4	DOID:1059 (implicated_via_orthology)
Disease	urinary potassium to creatinine ratio	CPS1 GIPR	2.01e-04	6	109	2	EFO_0009882
Disease	autism spectrum disorder (implicated_via_orthology)	KDM5C KDM5D LRBA GPRASP2 MOCOS	2.58e-04	152	109	5	DOID:0060041 (implicated_via_orthology)
Disease	cholelithiasis	NSD1 CPS1 UBXN2B LRBA	3.24e-04	88	109	4	EFO_0004799
Disease	Early Pregnancy Loss	COL6A3 FN1 ITGB4 CSRNP3	7.28e-04	109	109	4	C3830362
Disease	Spontaneous abortion	COL6A3 FN1 ITGB4 CSRNP3	7.28e-04	109	109	4	C0000786
Disease	Miscarriage	COL6A3 FN1 ITGB4 CSRNP3	7.28e-04	109	109	4	C4552766
Disease	Abortion, Tubal	COL6A3 FN1 ITGB4 CSRNP3	7.28e-04	109	109	4	C0000822
Disease	serum urea measurement	NSD1 EBF1 CPS1 GIPR TMEM266	8.02e-04	195	109	5	EFO_0009795
Disease	putamen volume change measurement	SH2D3C DCHS1	1.03e-03	13	109	2	EFO_0021495
Disease	Disorder of eye	COL11A1 ADGRV1 FREM2 CC2D2A CNGB1	1.16e-03	212	109	5	C0015397
Disease	very low density lipoprotein cholesterol measurement, cholesterol:total lipids ratio	ITGAM GIPR PMPCA LRBA MYRF	1.43e-03	222	109	5	EFO_0008317, EFO_0020943
Disease	blood urea nitrogen measurement	CENPN EBF1 ADGRV1 CPS1 GIPR ZNF276 LRBA	1.47e-03	452	109	7	EFO_0004741
Disease	triglycerides:total lipids ratio, very low density lipoprotein cholesterol measurement	ITGAM GIPR PMPCA LRBA MYRF	1.51e-03	225	109	5	EFO_0008317, EFO_0020947
Disease	syndromic intellectual disability (implicated_via_orthology)	KDM5C KDM5D	1.57e-03	16	109	2	DOID:0050888 (implicated_via_orthology)
Disease	SARS-CoV-2 antibody measurement, response to COVID-19 vaccine	COL11A1 UBXN2B SPATA13	1.58e-03	62	109	3	EFO_0803360, EFO_0803362
Disease	glutarylcarnitine (C5-DC) measurement	CPS1 TMEM266	1.77e-03	17	109	2	EFO_0800030
Disease	waist-hip ratio	NID2 CPAMD8 COL11A1 FN1 NSD1 EBF1 ADAMTSL3 EBF2 GIPR PKD1 XRN1 EFR3B	1.92e-03	1226	109	12	EFO_0004343
Disease	spine bone size	COL11A1 ADAMTSL3	1.99e-03	18	109	2	EFO_0004508
Disease	Cholecystitis	UBXN2B LRBA	2.22e-03	19	109	2	HP_0001082
Disease	level of Phosphatidylethanolamine (18:0_20:4) in blood serum	MINDY2 MYRF	2.22e-03	19	109	2	OBA_2045140
Disease	citrulline measurement	CPS1 PTPRE	2.46e-03	20	109	2	EFO_0009777
Disease	Hodgkin Disease	SOCS1 CDK2	2.98e-03	22	109	2	C0019829
Disease	drug-induced liver injury	CPNE8 LRBA	3.54e-03	24	109	2	EFO_0004228
Disease	ICAM-1 measurement	FDX2 RAVER1	3.54e-03	24	109	2	EFO_0004520
Disease	anthropometric measurement	COL11A1 FN1 EBF1 ADAMTSL3	3.55e-03	168	109	4	EFO_0004302

Protein segments in the cluster

Peptide	Gene	Start	Entry
VEVRVARIFNTFGPR	UXS1	251	Q8NBZ7
FAEPRVVRVQEGETA	ADGRV1	1006	Q8WXG9
VAIRDIVQFVPFRQF	CPNE3	481	O75131
RQGQPVEIERTAFVD	EBF2	76	Q9HAK2
EVEQTPQGFRSTLRA	ASCC1	51	Q8N9N2
VFAPVTEEQARGALR	GIPR	356	P48546
RRIVTTVFNDEGIQF	CC2D2B	1101	Q6DHV5
GPRFDINDTIRAVVL	DISP1	911	Q96F81
GLTEFNPEIQVSRIR	RCC1L	386	Q96I51
QQFEELVRPFGSLER	RAVER1	146	Q8IY67
NRPIGRVQIFTADLS	NSD1	1876	Q96L73
FPVAGADVQTLRERL	QSOX1	136	O00391
FQRGQPFEVLIIASD	LGALS7	81	P47929
FVVRVTARDPDQGTN	DCHS1	491	Q96JQ0
ESRIFTVNPRGELIQ	LPIN3	781	Q9BQK8
VDVFEFVSRIRNQRP	PTPRE	361	P23469
ISVQFRGGPQRFEVT	KAZALD1	221	Q96I82
GPQFITNSEEVRLRS	MAD2L1	171	Q13257
LGSVIRNFQDFFPVI	MAGEA12	136	P43365
FQVRQESGTLEAPER	GLTPD2	56	A6NH11
RPQDRFSIIGFSNRI	ITIH5	326	Q86UX2
VFRQFRFPAAVVVED	MGAT1	196	P26572
NQEDFFQRVPRGEIL	GABPA	226	Q06546
GVVRQFRNPDTIFIL	IQSEC1	641	Q6DN90
VTDGRNPVFRTFRIS	FREM2	1511	Q5SZK8
FAVEVDNFRFTPRVQ	KDM5D	56	Q9BY66
SNTAGRIEFNPIRVR	CSRNP3	251	Q8WYN3
FLFQAREVRGAAPVD	COL11A1	26	P12107
VNVVFVDRSGQRIPV	FDX2	71	Q6P4F2
VRILREGQIEPSFVF	PIK3C2A	1446	O00443
FVERPRLSQNLDGVV	EFR3B	636	Q9Y2G0
RVIRGFEATLVQEAP	EVPL	646	Q92817
FEARNPRELTVVQGE	EPS8L3	461	Q8TE67
VQVGRQADRRAFTVP	GPR153	201	Q6NV75
RFTNVPERTQIDVGR	KDM4C	786	Q9H3R0
PVLREAVEAQIRSFG	LRBA	2461	P50851
GSANVVPEALQRFTR	MICAL1	321	Q8TDZ2
IPRQSVAQRFEDGTI	MOCOS	306	Q96EN8
LFVEATPQQDIGRRT	METRNL	151	Q641Q3
APRFRGQVLFVVVDV	PDIA2	301	Q13087
NRFVRTAIPFTQEPQ	CYFIP2	886	Q96F07
NAQFLESIRRGEVPA	NSFL1C	206	Q9UNZ2
QPEFSVSRGDQVARI	ITGB4	996	P16144
RRDQAVQTGFVSPIR	IFFO1	121	Q0D2I5
EERVLRFAVTNQIGP	NID2	736	Q14112
NRFIVLNPTRFGTTV	PALS2	356	Q9NZW5
GLQTVIQRDFFPDVE	ESS2	46	Q96DF8
IQQSFRPRFLGVAEQ	CPS1	1366	P31327
QVLVRPFVEVSFQRT	CC2D2A	1096	Q9P2K1
EVGFVLVDNQRSRLP	FCGBP	546	Q9Y6R7
GQRLPISRNTFAEVT	FN1	951	P02751
LVQVNPGEAFTIRRE	FNDC3A	36	Q9Y2H6
LRSGFRLTPAQVFQE	CPAMD8	626	Q8IZJ3
AGITPLFLTRQEDRQ	COL6A3	2536	P12111
REFGRTEVIDNTLNP	CPNE9	51	Q8IYJ1
QTFEGRQRERFDVGP	DIDO1	2081	Q9BTC0
ERVQRITQETFGDYP	CENPN	246	Q96H22
DRQGQPVEIERTAFV	EBF1	76	Q9UH73
VEFSEEPFGVIVRRQ	GAA	211	P10253
FSREQAVQTGPELLR	IFFO2	101	Q5TF58
EQSGTRPERLYIQVF	EMC1	396	Q8N766
NFFRQVVISPQVSRE	GADL1	491	Q6ZQY3
QLFRIFRTLGTPDEV	CDK2	211	P24941
DRQGQPVEIERTAFV	EBF3	76	Q9H4W6
EVVQIRPIFSNRGDF	SART3	731	Q15020
PRVLFSQAQVFELER	NKX2-3	151	Q8TAU0
PSVNGVRRFSDIQIR	MTHFD1	481	P11586
REFGRTEVIDNTLNP	CPNE8	61	Q86YQ8
TAEFGTQELRRPAQL	PKD1	591	P98161
GLDVNVRFTGVRVFE	MINDY2	336	Q8NBR6
SRPVIFEDVGRQVLA	PMPCA	441	Q10713
LSFVVRFPNQGRQVD	USP9X	886	Q93008
VTVIARQRGDQLVPF	TMEM43	261	Q9BTV4
VGENTNNLFRPRVRE	GPRASP2	296	Q96D09
RAGLQVEFINPIFEF	NR1H2	341	P55055
ELTRRPIFITFEGQR	SIGIRR	251	Q6IA17
VVRRNREAGIPFDTQ	SI	371	P14410
GPREFNVTVTVRNDG	ITGAM	796	P11215
EPVGTFLVRDSRQRN	SOCS1	96	O15524
RVTSVVTGFNNLPDR	B3GNT2	101	Q9NY97
SDSVQPVPRFRQELF	CNDP1	61	Q96KN2
ERFRGPELQTVTTQE	CNGA2	96	Q16280
ITVFQTRLQFVRGGD	CNGB1	706	Q14028
FPASFVRLRVNQEEL	SPATA13	196	Q96N96
FTRIQDPQRGEVLTF	UHRF1BP1L	166	A0JNW5
DVRNFIVQSRPEFAA	UBXN2B	281	Q14CS0
RDPEISNGFRLISVN	SESN3	216	P58005
TPGRVREALRQQDFT	PWP2	746	Q15269
GVRQVAVRPQSVFVS	SH3PXD2A	971	Q5TCZ1
VAVLRDDFRQSPGNV	ROBO3	161	Q96MS0
LARFVAQVGPEIEQF	SUGP2	791	Q8IX01
LDISPERVRVGAFQF	VWA2	81	Q5GFL6
DFQRLLGVAVRQDPT	ZNF276	116	Q8N554
FDRVVNVRENFSVPV	XRN1	1106	Q8IZH2
EQRISGERVPQFRTS	ZNF211	86	Q13398
RQIRFRFDGQPINET	SUMO2	56	P61956
REPNTGITVFFDRIQ	SERPINE3	386	A8MV23
IGPLIDRQIFRFSED	TENM3	1996	Q9P273
PQEVFIRSTNIFRNL	ACP6	156	Q9NPH0
EVQRGFRPIAVELEF	ZNF252P-AS1	126	Q0IIN9
PREVSETLVQRNGDF	SH2D3C	226	Q8N5H7
GNETVTLRQSFVPVR	TGM1	746	P22735
FVFGLQGEIVEQPRT	TRAPPC9	116	Q96Q05
PVTAEGFQERVRAQR	ZNF622	41	Q969S3
IVRALSVQFEGAERP	SHE	336	Q5VZ18
ANRNDPVFETLRTGV	STAC3	171	Q96MF2
VPVRGVELQAAAERF	TIGD7	96	Q6NT04
IPRFLTFLQDGEVQF	TRRAP	66	Q9Y4A5
EGFTVFQIRPVIHFQ	TMEM266	491	Q2M3C6
VEFQRGSERQTFKIP	ADAMTSL3	296	P82987
FAVEVDNFRFTPRIQ	KDM5C	56	P41229
RIIVRASNPGQFESD	MYRF	526	Q9Y2G1
FPRGTDQVRLDEQLT	MYRIP	681	Q8NFW9