Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
Domain	DUF4599	SPATA31A3 SPATA31A5 SPATA31A7	1.83e-06	12	39	3	PF15371
Domain	DUF4599	SPATA31A3 SPATA31A5 SPATA31A7	1.83e-06	12	39	3	IPR027970
Domain	VWA	COL6A3 COL6A5	6.09e-03	56	39	2	PF00092
Domain	-	COL6A3 COL6A5	1.04e-02	74	39	2	3.40.50.410
Pubmed	The testis-specific VAD1.3/AEP1 interacts with β-actin and syntaxin 1 and directs peri-nuclear/Golgi expression with bipartite nucleus localization (BNL) sequence.	SPATA31A1 SPATA31A3 SPATA31A5 SPATA31A7	2.75e-11	6	42	4	20850414
Pubmed	Targeted disruption of the spermatid-specific gene Spata31 causes male infertility.	SPATA31A1 SPATA31A3 SPATA31A5 SPATA31A7	2.75e-11	6	42	4	25930072
Pubmed	Majority of cerebrospinal fluid-contacting neurons in the spinal cord of C57Bl/6N mice is present in ectopic position unlike in other studied experimental mice strains and mammalian species.	SPATA31A1 SPATA31A3 SPATA31A5 SPATA31A7	1.92e-08	24	42	4	32212159
Pubmed	TAF4 inactivation reveals the 3 dimensional growth promoting activities of collagen 6A3.	COL6A3 TAF4	4.27e-06	3	42	2	24498316
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	DOCK1 SPTLC3 BEST1 G2E3 PTPN13 TAF4 RRBP1 LRRN1 GOLGA4 POLG	8.43e-06	1489	42	10	28611215
Pubmed	Differential and restricted expression of novel collagen VI chains in mouse.	COL6A3 COL6A5	1.42e-05	5	42	2	21477648
Pubmed	The expanded collagen VI family: new chains and new questions.	COL6A3 COL6A5	1.42e-05	5	42	2	23869615
Pubmed	Three novel collagen VI chains with high homology to the alpha3 chain.	COL6A3 COL6A5	2.98e-05	7	42	2	18276594
Pubmed	Three novel collagen VI chains, alpha4(VI), alpha5(VI), and alpha6(VI).	COL6A3 COL6A5	2.98e-05	7	42	2	18400749
Pubmed	A mouse model for dominant collagen VI disorders: heterozygous deletion of Col6a3 Exon 16.	COL6A3 COL6A5	3.97e-05	8	42	2	24563484
Pubmed	Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.	NKTR MPHOSPH10 RRBP1 ESPL1 NUP205	1.83e-04	440	42	5	34244565
Pubmed	A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.	PTPN13 MPHOSPH10 RRBP1 ESPL1 MGA RBMS2	2.21e-04	724	42	6	36232890
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	G2E3 TYW1 PTPN13 MPHOSPH10 ESPL1 MGA POLG	2.91e-04	1084	42	7	11544199
Pubmed	Substrate trapping proteomics reveals targets of the βTrCP2/FBXW11 ubiquitin ligase.	DOCK1 PTPN13 HIVEP1	5.03e-04	128	42	3	25332235
Pubmed	Physical association and coordinate function of the H3 K4 methyltransferase MLL1 and the H4 K16 acetyltransferase MOF.	TAF4 MGA	6.47e-04	31	42	2	15960975
Pubmed	Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals.	DOCK1 COL6A3 TAF4	6.81e-04	142	42	3	19851296
Pubmed	Association of genetic variants with hemorrhagic stroke in Japanese individuals.	DOCK1 COL6A3 TAF4	6.95e-04	143	42	3	20198315
Pubmed	Tbx1 is required autonomously for cell survival and fate in the pharyngeal core mesoderm to form the muscles of mastication.	LRRN1 PITX2	7.34e-04	33	42	2	24705356
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	HIVEP1 TAF4 MGA SCMH1 RBM34	8.01e-04	608	42	5	36089195
Pubmed	Interaction network of human early embryonic transcription factors.	HIVEP1 TAF4 MGA PITX2	8.43e-04	351	42	4	38297188
Pubmed	Prediction of the coding sequences of unidentified human genes. XVI. The complete sequences of 150 new cDNA clones from brain which code for large proteins in vitro.	G2E3 ZNFX1 RRBP1	8.45e-04	153	42	3	10718198
Pubmed	Assembly, verification, and initial annotation of the NIA mouse 7.4K cDNA clone set.	COL6A3 MGA SCMH1	9.10e-04	157	42	3	12466305
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	MPHOSPH10 HIVEP1 TAF4 RRBP1 MGA RBMS2	9.47e-04	954	42	6	36373674
Pubmed	Regulatory mechanisms of anthrax toxin receptor 1-dependent vascular and connective tissue homeostasis.	COL6A3 COL6A5	9.74e-04	38	42	2	25572963
Pubmed	PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes.	MGA SCMH1	1.13e-03	41	42	2	22325352
Pubmed	FBXL13 directs the proteolysis of CEP192 to regulate centrosome homeostasis and cell migration.	VWDE NUP205	1.19e-03	42	42	2	29348145
Cytoband	Ensembl 112 genes in cytogenetic band chr9q12	SPATA31A5 SPATA31A7	2.28e-05	8	42	2	chr9q12
Cytoband	9p13.1	SPATA31A1 SPATA31A3	2.23e-04	24	42	2	9p13.1
Cytoband	7q33	SLC13A4 NUP205	6.55e-04	41	42	2	7q33
Cytoband	Ensembl 112 genes in cytogenetic band chr7q33	SLC13A4 NUP205	1.31e-03	58	42	2	chr7q33
Cytoband	Ensembl 112 genes in cytogenetic band chr20p12	SPTLC3 RRBP1	5.45e-03	120	42	2	chr20p12
ToppCell	10x3'2.3-week_12-13-Mesenchymal_myocytic-stroma-muscle_stem_cell\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	SPTLC3 ATP1B4 PTPN13 VWDE PITX2	6.92e-07	178	42	5	8f31b3fac51591f7f2bcb898c07708b3e9f93a16
ToppCell	10x_5'_v1-Non-neoplastic-Lymphoid-NK-NK-Z\|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	NKTR HIVEP1 LRRN1 VWDE POLG	1.06e-06	194	42	5	3211d89440a6f4a9b3d4cfb755890816944242ec
ToppCell	10x3'2.3-week_12-13-Mesenchymal_myocytic\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	ATP1B4 PTPN13 VWDE PITX2	2.52e-05	181	42	4	47dce04db3392333eb2f7b9b24c32e6740d2d02f
ToppCell	10x3'2.3-week_12-13-Mesenchymal_myocytic-stroma\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	ATP1B4 PTPN13 VWDE PITX2	2.52e-05	181	42	4	19103221c3a5a16b16378348004b2c50caee4f01
ToppCell	PND10\|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	COL6A3 RRBP1 GOLGA4 IGHM	3.04e-05	190	42	4	d67e2814047c8df2ae4b7bc8be9539f5df6ecef2
ToppCell	COVID-19-Heart-Fib_+_EC_+_Pericyte\|Heart / Disease (COVID-19 only), tissue and cell type	DOCK1 COL6A3 PTPN13 RRBP1	3.17e-05	192	42	4	60b1312e84f6d6448365a952469c506c00b5fe93
ToppCell	human_hepatoblastoma-Tumor_cells\|World / Sample and Cell Type and Tumor Cluster (all cells)	NKTR HIVEP1 RRBP1 GOLGA4	3.17e-05	192	42	4	916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell	human_hepatoblastoma\|World / Sample and Cell Type and Tumor Cluster (all cells)	NKTR HIVEP1 RRBP1 GOLGA4	3.23e-05	193	42	4	e6a688bc834f845ff64dae1be64f073eec5091a1
Computational	Genes in the cancer module 547.	MGA IGHM	4.72e-04	16	22	2	MODULE_547
Computational	Genes in the cancer module 313.	MGA IGHM	6.70e-04	19	22	2	MODULE_313
Computational	Genes in the cancer module 240.	MGA IGHM	7.43e-04	20	22	2	MODULE_240
Computational	Genes in the cancer module 156.	MGA IGHM	9.01e-04	22	22	2	MODULE_156
Disease	lysophosphatidylcholine measurement	COL6A3 BEST1 MGA	5.51e-05	62	35	3	EFO_0010224
Disease	lysophosphatidylcholine 18:1 measurement	MPHOSPH10 TAF4	1.84e-04	17	35	2	EFO_0010360

Protein segments in the cluster

Peptide	Gene	Start	Entry
KVQAAKKNGKGNVCH	CCL28	86	Q9NRJ3
ENNVVVKKQGPNLHN	GRAMD1C	36	Q8IYS0
VVNGFQNQKHRKGKV	CTSL3P	36	Q5NE16
KNRKPDNHQSPGKEN	ANKRD62	336	A6NC57
PKNHKAAKQNVRGQE	BEST1	426	O76090
KGHFQGGIQVKNEKN	DBF4	11	Q9UBU7
KNQAVPVQCQLKGKG	ATP1B4	321	Q9UN42
HQKQGQKRKNSQPGV	RBM34	136	P42696
GPKKRQNQGKFVQNG	RBMS2	221	Q15434
NPPKNVQQHEKVQKA	NUP205	56	Q92621
DGLNNKPQRDGKQKN	MGA	261	Q8IWI9
QKCPSVHGQKEGKDN	NLRP10	616	Q86W26
VEKEGGKNNIQAKQN	GOLGA4	1816	Q13439
KQGKHKVQPPTKQGQ	POLG	316	P54098
EQQSKVQNKGQGKPR	MPHOSPH10	181	O00566
QKAKKHVLPNSNNVG	G2E3	296	Q7L622
KVHLQKGKQQAQVPC	ESPL1	1076	Q14674
NKVIAAKEVNHKGQG	DOCK1	366	Q14185
VVCKVQHPNGNKEKN	IGHM	86	P01871
NPGQNNNIKGQKGSK	COL6A5	1516	A8TX70
GDQPTKNLVKFGHKQ	COL6A3	2841	P12111
KNLVKFGHKQVNVPN	COL6A3	2846	P12111
NVNGQPVQKALKEGK	MS4A8	56	Q9BY19
PIKTANQHQGKKQHP	SLC13A4	221	Q9UKG4
NQHQGKKQHPSQEKP	SLC13A4	226	Q9UKG4
PGKERKQNPKHQNEL	SCNM1	81	Q9BWG6
NKNPIHKIQEGDFKN	LRRN1	271	Q6UXK5
DQNAQGQGPEKVKKT	PTPN13	1471	Q12923
QAAAAQKNKLKEPGG	TAF4	811	O00268
NSENNRGKPQKHKHG	NKTR	966	P30414
KQNGHIKFLTKGDNN	SEC11B	91	P0C7V7
KVNQHKQKFQAPVCG	SPATA31A7	1231	Q8IWB4
QHPGANEKDKSQQGK	PITX2	56	Q99697
KNGIVKEAQQNGKPH	SPTLC3	31	Q9NUV7
NGSTGPHLDKKKVQQ	SCMH1	366	Q96GD3
KVNQHKQKFQAPVCG	SPATA31A3	1231	Q5VYP0
KLGLNVQKHPGNEKE	VWDE	706	Q8N2E2
PNQGKKAEGAQNQGK	RRBP1	256	Q9P2E9
KVNQHKQKFQAPVCG	SPATA31A1	1231	Q5TZJ5
KVNQHKQKFQAPVCG	SPATA31A5	1231	Q5VU36
SGVQPKGHINTKKNL	ZNF654	516	Q8IZM8
HQKPTEQPQQAKKLG	ZNFX1	131	Q9P2E3
ENHQNMIKQFKGVPG	TYW1	451	Q9NV66
KSPGVKNQGDKVNIQ	HIVEP1	1896	P15822