Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	mRNA regulatory element binding translation repressor activity	CPEB2 CELF1 CPEB4	4.52e-05	17	83	3	GO:0000900
GeneOntologyMolecularFunction	mRNA 3'-UTR binding	CPEB2 CELF1 CPEB4 PUM2 RNF40 PUM1 HNRNPK	1.51e-04	276	83	7	GO:0003730
GeneOntologyCellularComponent	cytoplasmic stress granule	CELF1 PUM2 GIGYF2 PUM1 HNRNPK	3.79e-05	96	82	5	GO:0010494
GeneOntologyCellularComponent	asymmetric synapse	ADORA2A ABI1 PTPRZ1 SPTBN1 CPEB4 GRIA3 FLRT3 DMD SHANK3	1.04e-04	477	82	9	GO:0032279
GeneOntologyCellularComponent	axon	ADORA2A ABI1 PTPRZ1 NTM SPTBN1 CPEB4 INSRR GRIA3 FLRT3 DMD PUM1 HNRNPK	1.77e-04	891	82	12	GO:0030424
GeneOntologyCellularComponent	postsynaptic membrane	ADORA2A PTPRZ1 GRIA3 FLRT3 DMD ITGB3 SLC1A6 SHANK3	1.89e-04	405	82	8	GO:0045211
GeneOntologyCellularComponent	neuron to neuron synapse	ADORA2A ABI1 PTPRZ1 SPTBN1 CPEB4 GRIA3 FLRT3 DMD SHANK3	2.08e-04	523	82	9	GO:0098984
GeneOntologyCellularComponent	cell projection membrane	ADORA2A TCTN3 PTPRZ1 SPTBN1 PKD1 DMD ITGB3 SHANK3	2.88e-04	431	82	8	GO:0031253
GeneOntologyCellularComponent	glutamatergic synapse	CPEB2 ADORA2A ABI1 PTPRZ1 SPTBN1 GRIA3 FLRT3 ITGB3 SLC1A6 SHANK3 HNRNPK	3.38e-04	817	82	11	GO:0098978
GeneOntologyCellularComponent	cell-substrate junction	HMCN1 CPNE3 FLRT3 FLRT1 DMD ITGB3 ITGB8 HNRNPK	3.46e-04	443	82	8	GO:0030055
GeneOntologyCellularComponent	postsynaptic density	ABI1 PTPRZ1 SPTBN1 CPEB4 GRIA3 FLRT3 DMD SHANK3	3.89e-04	451	82	8	GO:0014069
GeneOntologyCellularComponent	synaptic membrane	ADORA2A CACNA2D2 PTPRZ1 GRIA3 FLRT3 DMD ITGB3 SLC1A6 SHANK3	4.60e-04	583	82	9	GO:0097060
GeneOntologyCellularComponent	postsynapse	ADORA2A ABI1 PTPRZ1 SPTBN1 CPEB4 GRIA3 FLRT3 DMD ITGB3 SLC1A6 SHANK3 HNRNPK	5.93e-04	1018	82	12	GO:0098794
GeneOntologyCellularComponent	cytoplasmic ribonucleoprotein granule	CELF1 PUM2 GIGYF2 PUM1 PPP6R2 HNRNPK	6.64e-04	269	82	6	GO:0036464
GeneOntologyCellularComponent	postsynaptic specialization	ABI1 PTPRZ1 SPTBN1 CPEB4 GRIA3 FLRT3 DMD SHANK3	7.97e-04	503	82	8	GO:0099572
GeneOntologyCellularComponent	excitatory synapse	NTM GRIA3 SLC1A6 SHANK3	8.35e-04	107	82	4	GO:0060076
GeneOntologyCellularComponent	ribonucleoprotein granule	CELF1 PUM2 GIGYF2 PUM1 PPP6R2 HNRNPK	9.29e-04	287	82	6	GO:0035770
GeneOntologyCellularComponent	external encapsulating structure	COL6A2 HMCN1 PTPRZ1 FLRT3 FLRT1 PLXNB2 PKHD1L1 PLXNA2 KNG1	1.09e-03	658	82	9	GO:0030312
GeneOntologyCellularComponent	semaphorin receptor complex	PLXNB2 PLXNA2	1.15e-03	13	82	2	GO:0002116
GeneOntologyCellularComponent	filopodium	ABI1 PTPRZ1 DMD ITGB3	1.40e-03	123	82	4	GO:0030175
GeneOntologyCellularComponent	secretory granule membrane	ABCA13 CEACAM3 CPNE3 TMX3 ITGB3 VPS13B	1.86e-03	329	82	6	GO:0030667
GeneOntologyCellularComponent	platelet alpha granule membrane	TMX3 ITGB3	1.99e-03	17	82	2	GO:0031092
GeneOntologyCellularComponent	neuron projection terminus	GRIA3 FLRT3 FLRT1 DMD HNRNPK	2.24e-03	233	82	5	GO:0044306
GeneOntologyCellularComponent	dendritic spine	PTPRZ1 CPEB4 GRIA3 SHANK3 HNRNPK	2.64e-03	242	82	5	GO:0043197
GeneOntologyCellularComponent	neuron spine	PTPRZ1 CPEB4 GRIA3 SHANK3 HNRNPK	2.88e-03	247	82	5	GO:0044309
GeneOntologyCellularComponent	filopodium membrane	DMD ITGB3	3.04e-03	21	82	2	GO:0031527
GeneOntologyCellularComponent	axolemma	ADORA2A SPTBN1	3.04e-03	21	82	2	GO:0030673
GeneOntologyCellularComponent	cell leading edge	ADORA2A ABI1 PTPRZ1 SPTBN1 KLHL41 DMD ITGB3	3.48e-03	500	82	7	GO:0031252
GeneOntologyCellularComponent	intermediate filament cytoskeleton	ADORA2A PKP2 DMD LMNTD1 SLC1A6	3.77e-03	263	82	5	GO:0045111
GeneOntologyCellularComponent	extracellular matrix	COL6A2 HMCN1 PTPRZ1 FLRT3 FLRT1 PLXNB2 PLXNA2 KNG1	4.18e-03	656	82	8	GO:0031012
GeneOntologyCellularComponent	actin-based cell projection	ABI1 PTPRZ1 DMD PKHD1L1 ITGB3	4.76e-03	278	82	5	GO:0098858
GeneOntologyCellularComponent	anchoring junction	HMCN1 CPNE3 PKP2 FLRT3 FLRT1 DMD ECT2 ITGB3 ITGB8 HNRNPK	4.78e-03	976	82	10	GO:0070161
GeneOntologyCellularComponent	cytoplasmic vesicle membrane	SLC15A2 ABCA13 CEACAM3 PKD1 CPNE3 GOLIM4 GRIA3 FLRT1 DMD TMX3 ITGB3 VPS13B	4.83e-03	1307	82	12	GO:0030659
Domain	VWFA	COL6A2 HMCN1 CACNA2D2 CPNE3 ITGB3 ITGB8	1.48e-06	82	81	6	PS50234
Domain	VWA	COL6A2 HMCN1 CACNA2D2 CPNE3 ITGB3 ITGB8	1.71e-06	84	81	6	SM00327
Domain	VWF_A	COL6A2 HMCN1 CACNA2D2 CPNE3 ITGB3 ITGB8	4.48e-06	99	81	6	IPR002035
Domain	TIG	CAMTA1 PLXNB2 PKHD1L1 PLXNA2	9.45e-06	31	81	4	PF01833
Domain	IPT	CAMTA1 PLXNB2 PKHD1L1 PLXNA2	1.08e-05	32	81	4	IPR002909
Domain	-	COL6A2 HMCN1 CACNA2D2 ITGB3 ITGB8	1.73e-05	74	81	5	3.40.50.410
Domain	Pumilio_RNA-bd	PUM2 PUM1	1.86e-05	2	81	2	IPR033712
Domain	-	HMCN1 PTPRZ1 NTM CEACAM3 INSRR FLRT3 FLRT1 CAMTA1 PLXNB2 BTNL9 PKHD1L1 PLXNA2	2.72e-05	663	81	12	2.60.40.10
Domain	PSI	PLXNB2 ITGB3 ITGB8 PLXNA2	3.91e-05	44	81	4	IPR016201
Domain	PSI	PLXNB2 ITGB3 ITGB8 PLXNA2	4.66e-05	46	81	4	SM00423
Domain	Ig-like_fold	HMCN1 PTPRZ1 NTM CEACAM3 INSRR FLRT3 FLRT1 CAMTA1 PLXNB2 BTNL9 PKHD1L1 PLXNA2	5.02e-05	706	81	12	IPR013783
Domain	PUM-HD	PUM2 PUM1	5.56e-05	3	81	2	IPR033133
Domain	PUF	PUM2 PUM1	5.56e-05	3	81	2	PF00806
Domain	PUM_HD	PUM2 PUM1	5.56e-05	3	81	2	PS50303
Domain	ARM-type_fold	USP34 IPO7 RNPEP ELMO2 PKP2 PUM2 PUM1 PPP6R2	1.10e-04	339	81	8	IPR016024
Domain	Pumilio_RNA-bd_rpt	PUM2 PUM1	1.11e-04	4	81	2	IPR001313
Domain	CEBP_ZZ	CPEB2 CPEB4	1.11e-04	4	81	2	IPR032296
Domain	PUM	PUM2 PUM1	1.11e-04	4	81	2	PS50302
Domain	CEBP_ZZ	CPEB2 CPEB4	1.11e-04	4	81	2	PF16366
Domain	RRM_7	CPEB2 CPEB4	1.11e-04	4	81	2	PF16367
Domain	Pumilio	PUM2 PUM1	1.11e-04	4	81	2	SM00025
Domain	IPT	PLXNB2 PKHD1L1 PLXNA2	2.13e-04	27	81	3	SM00429
Domain	Integrin_beta	ITGB3 ITGB8	5.11e-04	8	81	2	PF00362
Domain	INB	ITGB3 ITGB8	5.11e-04	8	81	2	SM00187
Domain	Integrin_bsu_VWA	ITGB3 ITGB8	5.11e-04	8	81	2	IPR002369
Domain	Plexin_cytopl	PLXNB2 PLXNA2	6.56e-04	9	81	2	PF08337
Domain	Plexin_cytoplasmic_RasGAP_dom	PLXNB2 PLXNA2	6.56e-04	9	81	2	IPR013548
Domain	Integrin_bsu	ITGB3 ITGB8	6.56e-04	9	81	2	IPR015812
Domain	Plexin	PLXNB2 PLXNA2	6.56e-04	9	81	2	IPR031148
Domain	Integin_beta_N	ITGB3 ITGB8	6.56e-04	9	81	2	IPR033760
Domain	INTEGRIN_BETA	ITGB3 ITGB8	6.56e-04	9	81	2	PS00243
Domain	PSI_integrin	ITGB3 ITGB8	6.56e-04	9	81	2	PF17205
Domain	Ig_E-set	CAMTA1 PLXNB2 PKHD1L1 PLXNA2	1.09e-03	104	81	4	IPR014756
Domain	ARM-like	IPO7 ELMO2 PKP2 PUM2 PUM1 PPP6R2	1.13e-03	270	81	6	IPR011989
Domain	LRRNT	PKD1 FLRT3 FLRT1	1.57e-03	53	81	3	PF01462
Domain	Terpenoid_cyclase/PrenylTrfase	ELMO2 ASIC3	2.72e-03	18	81	2	IPR008930
Domain	-	IPO7 ELMO2 PKP2 PUM2 PUM1	2.79e-03	222	81	5	1.25.10.10
Domain	-	CCAR1 MYOCD	3.70e-03	21	81	2	1.10.720.30
Domain	SAP	CCAR1 MYOCD	4.06e-03	22	81	2	PF02037
Domain	Actinin_actin-bd_CS	SPTBN1 DMD	4.43e-03	23	81	2	IPR001589
Domain	SAP	CCAR1 MYOCD	4.43e-03	23	81	2	SM00513
Domain	Spectrin	SPTBN1 DMD	4.43e-03	23	81	2	PF00435
Domain	ACTININ_2	SPTBN1 DMD	4.43e-03	23	81	2	PS00020
Domain	ACTININ_1	SPTBN1 DMD	4.43e-03	23	81	2	PS00019
Domain	SAP	CCAR1 MYOCD	5.22e-03	25	81	2	PS50800
Domain	Integrin_dom	ITGB3 ITGB8	5.22e-03	25	81	2	IPR032695
Domain	SAP_dom	CCAR1 MYOCD	5.22e-03	25	81	2	IPR003034
Domain	fn3	PTPRZ1 INSRR FLRT3 FLRT1	5.41e-03	162	81	4	PF00041
Domain	LRR_8	PKD1 LRRC8B FLRT3 FLRT1	6.53e-03	171	81	4	PF13855
Domain	ZnF_U1	SCAPER ZFHX3	6.99e-03	29	81	2	SM00451
Domain	Znf_U1	SCAPER ZFHX3	6.99e-03	29	81	2	IPR003604
Domain	Spectrin_repeat	SPTBN1 DMD	6.99e-03	29	81	2	IPR002017
Domain	Cys-rich_flank_reg_C	PKD1 FLRT3 FLRT1	7.04e-03	90	81	3	IPR000483
Domain	LRRCT	PKD1 FLRT3 FLRT1	7.04e-03	90	81	3	SM00082
Domain	Leu-rich_rpt_typical-subtyp	PKD1 LRRC8B FLRT3 FLRT1	7.36e-03	177	81	4	IPR003591
Domain	LRR_TYP	PKD1 LRRC8B FLRT3 FLRT1	7.36e-03	177	81	4	SM00369
Domain	Sema	PLXNB2 PLXNA2	7.96e-03	31	81	2	SM00630
Domain	Semap_dom	PLXNB2 PLXNA2	7.96e-03	31	81	2	IPR001627
Domain	Sema	PLXNB2 PLXNA2	7.96e-03	31	81	2	PF01403
Domain	SEMA	PLXNB2 PLXNA2	7.96e-03	31	81	2	PS51004
Domain	PSI	PLXNB2 PLXNA2	8.47e-03	32	81	2	PF01437
Domain	Spectrin/alpha-actinin	SPTBN1 DMD	8.47e-03	32	81	2	IPR018159
Domain	Plexin_repeat	PLXNB2 PLXNA2	8.47e-03	32	81	2	IPR002165
Domain	SPEC	SPTBN1 DMD	8.47e-03	32	81	2	SM00150
Domain	FN3	PTPRZ1 INSRR FLRT3 FLRT1	8.57e-03	185	81	4	SM00060
Pathway	WP_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY	CACNA2D2 PKP2 DMD ITGB3 ITGB8	2.80e-05	74	68	5	M39462
Pathway	KEGG_ARRHYTHMOGENIC_RIGHT_VENTRICULAR_CARDIOMYOPATHY_ARVC	CACNA2D2 PKP2 DMD ITGB3 ITGB8	2.80e-05	74	68	5	M16376
Pubmed	An Important Role of Pumilio 1 in Regulating the Development of the Mammalian Female Germline.	PUM2 SYCP3 PUM1	1.31e-07	5	83	3	27170441
Pubmed	NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure.	CPNE3 GRIA3 SLC1A6 HNRNPK	5.07e-07	27	83	4	23359859
Pubmed	A multi-factor trafficking site on the spliceosome remodeling enzyme BRR2 recruits C9ORF78 to regulate alternative splicing.	ABI1 IPO7 RNPEP ELMO2 SNRNP40 GOLIM4 PKP2 TMX3 PUM1 RFX1	9.18e-07	560	83	10	35241646
Pubmed	A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.	CPEB2 CELF1 RNPEP CPEB4 NUP98 PUM2 PUM1 HNRNPK	1.86e-06	347	83	8	16033648
Pubmed	A neurogenomics approach to gene expression analysis in the developing brain.	NTM GLCE PKD1 SCAPER ZFHX3 PPP6R2	3.45e-06	170	83	6	15582152
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	COL6A2 CASKIN2 ELMO2 CPNE3 ATL3 CCAR1 GIGYF2 PPP6R2 ECT2 ITGB3	3.47e-06	650	83	10	38777146
Pubmed	Prediction of the coding sequences of unidentified human genes. X. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.	HECTD4 CPNE3 GIGYF2 RNF40 PPP6R2	4.76e-06	102	83	5	9734811
Pubmed	Cloning and comparative sequence analysis of PUM1 and PUM2 genes, human members of the Pumilio family of RNA-binding proteins.	PUM2 PUM1	5.63e-06	2	83	2	12459267
Pubmed	Identification of diverse target RNAs that are functionally regulated by human Pumilio proteins.	PUM2 PUM1	5.63e-06	2	83	2	29165587
Pubmed	PUMILIO-mediated translational control of somatic cell cycle program promotes folliculogenesis and contributes to ovarian cancer progression.	PUM2 PUM1	5.63e-06	2	83	2	35507203
Pubmed	Bespoke RNA recognition by Pumilios.	PUM2 PUM1	5.63e-06	2	83	2	26517885
Pubmed	Mouse Pum1 and Pum2 genes, members of the Pumilio family of RNA-binding proteins, show differential expression in fetal and adult hematopoietic stem cells and progenitors.	PUM2 PUM1	5.63e-06	2	83	2	12667987
Pubmed	Genome-wide comparison of human keratinocyte and squamous cell carcinoma responses to UVB irradiation: implications for skin and epithelial cancer.	PUM2 PUM1	5.63e-06	2	83	2	12771951
Pubmed	Alternate modes of cognate RNA recognition by human PUMILIO proteins.	PUM2 PUM1	5.63e-06	2	83	2	21397187
Pubmed	A Quantitative and Predictive Model for RNA Binding by Human Pumilio Proteins.	PUM2 PUM1	5.63e-06	2	83	2	31078383
Pubmed	Principles of mRNA control by human PUM proteins elucidated from multimodal experiments and integrative data analysis.	PUM2 PUM1	5.63e-06	2	83	2	32753408
Pubmed	PUMILIO proteins promote colorectal cancer growth via suppressing p21.	PUM2 PUM1	5.63e-06	2	83	2	35338151
Pubmed	Effects of PUMILIO1 and PUMILIO2 knockdown on cardiomyogenic differentiation of human embryonic stem cells culture.	PUM2 PUM1	5.63e-06	2	83	2	32437472
Pubmed	Comparative analysis of mRNA targets for human PUF-family proteins suggests extensive interaction with the miRNA regulatory system.	PUM2 PUM1	5.63e-06	2	83	2	18776931
Pubmed	Characterization of RNP Networks of PUM1 and PUM2 Post-Transcriptional Regulators in TCam-2 Cells, a Human Male Germ Cell Model.	PUM2 PUM1	5.63e-06	2	83	2	32316190
Pubmed	KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.	CPEB2 ABI1 RNPEP PTPRZ1 NTM SPTBN1 CPEB4 SCAPER DMD PPP6R2 SHANK3 TRAPPC9 KNG1 HNRNPK	6.93e-06	1431	83	14	37142655
Pubmed	An extracellular biochemical screen reveals that FLRTs and Unc5s mediate neuronal subtype recognition in the retina.	FLRT3 FLRT1 PLXNB2 PLXNA2	7.48e-06	52	83	4	26633812
Pubmed	ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure.	IPO7 CELF1 NUP98 PKP2 PUM2 SYCP3 PUM1	1.08e-05	315	83	7	26777405
Pubmed	Antagonistic and cooperative AGO2-PUM interactions in regulating mRNAs.	PUM2 PUM1	1.69e-05	3	83	2	30333515
Pubmed	Human Pumilio proteins directly bind the CCR4-NOT deadenylase complex to regulate the transcriptome.	PUM2 PUM1	1.69e-05	3	83	2	33397688
Pubmed	NORAD: Defender of the Genome.	PUM2 PUM1	1.69e-05	3	83	2	27157388
Pubmed	CPEB2, a novel putative translational regulator in mouse haploid germ cells.	CPEB2 CPEB4	1.69e-05	3	83	2	12672660
Pubmed	Identification of FLRT1, FLRT2, and FLRT3: a novel family of transmembrane leucine-rich repeat proteins.	FLRT3 FLRT1	1.69e-05	3	83	2	10644439
Pubmed	A novel function of human Pumilio proteins in cytoplasmic sensing of viral infection.	PUM2 PUM1	1.69e-05	3	83	2	25340845
Pubmed	PUMILIO/FOXP1 signaling drives expansion of hematopoietic stem/progenitor and leukemia cells.	PUM2 PUM1	1.69e-05	3	83	2	28232582
Pubmed	Noncoding RNA NORAD Regulates Genomic Stability by Sequestering PUMILIO Proteins.	PUM2 PUM1	1.69e-05	3	83	2	26724866
Pubmed	COP9 signalosome component CSN-5 stabilizes PUF proteins FBF-1 and FBF-2 in Caenorhabditis elegans germline stem and progenitor cells.	PUM2 PUM1	1.69e-05	3	83	2	38427913
Pubmed	Pharmacologic Blockade of αvβ1 Integrin Ameliorates Renal Failure and Fibrosis In Vivo.	ITGB3 ITGB8	1.69e-05	3	83	2	28220032
Pubmed	Global Analysis of CPEBs Reveals Sequential and Non-Redundant Functions in Mitotic Cell Cycle.	CPEB2 CPEB4	1.69e-05	3	83	2	26398195
Pubmed	Pumilio facilitates miRNA regulation of the E2F3 oncogene.	PUM2 PUM1	1.69e-05	3	83	2	22345517
Pubmed	Dead end1 is an essential partner of NANOS2 for selective binding of target RNAs in male germ cell development.	PUM2 SYCP3 PUM1	1.95e-05	22	83	3	26589352
Pubmed	Epilepsy- and intellectual disability-associated CYFIP2 interacts with both actin regulators and RNA-binding proteins in the neonatal mouse forebrain.	ABI1 CELF1 NTM GRIA3 PUM1	2.46e-05	143	83	5	32560809
Pubmed	SLFN11 promotes CDT1 degradation by CUL4 in response to replicative DNA damage, while its absence leads to synthetic lethality with ATR/CHK1 inhibitors.	HECTD4 NUP98 SNRNP40 CCAR1 POLQ HNRNPK	3.09e-05	250	83	6	33536335
Pubmed	Quantitative Proteomics Links the LRRC59 Interactome to mRNA Translation on the ER Membrane.	LMF2 NUP98 PKP2 GIGYF2 TMX3 PLXNB2 HNRNPK	3.29e-05	375	83	7	32788342
Pubmed	CPEB2-dependent translation of long 3'-UTR Ucp1 mRNA promotes thermogenesis in brown adipose tissue.	CPEB2 CPEB4	3.37e-05	4	83	2	30177570
Pubmed	Mammalian Pum1 and Pum2 Control Body Size via Translational Regulation of the Cell Cycle Inhibitor Cdkn1b.	PUM2 PUM1	3.37e-05	4	83	2	30811992
Pubmed	Integrin alpha v beta 8. Interaction with vitronectin and functional divergence of the beta 8 cytoplasmic domain.	ITGB3 ITGB8	3.37e-05	4	83	2	7525578
Pubmed	FLRT3 Marks Direction-Selective Retinal Ganglion Cells That Project to the Medial Terminal Nucleus.	FLRT3 FLRT1	3.37e-05	4	83	2	34955746
Pubmed	Two previously undescribed members of the mouse CPEB family of genes and their inducible expression in the principal cell layers of the hippocampus.	CPEB2 CPEB4	3.37e-05	4	83	2	12871996
Pubmed	Regulated expression of FLRT genes implies a functional role in the regulation of FGF signalling during mouse development.	FLRT3 FLRT1	3.37e-05	4	83	2	16872596
Pubmed	Interplay between αvβ3 integrin and nucleolin regulates human endothelial and glioma cell migration.	PTPRZ1 ITGB3	3.37e-05	4	83	2	23161541
Pubmed	Ankyrin-B interactions with spectrin and dynactin-4 are required for dystrophin-based protection of skeletal muscle from exercise injury.	SPTBN1 DMD	3.37e-05	4	83	2	21186323
Pubmed	Target RNA motif and target mRNAs of the Quaking STAR protein.	PUM2 PUM1	3.37e-05	4	83	2	16041388
Pubmed	Loss of β2-spectrin prevents cardiomyocyte differentiation and heart development.	SPTBN1 DMD	3.37e-05	4	83	2	24064296
Pubmed	Structural Basis of Teneurin-Latrophilin Interaction in Repulsive Guidance of Migrating Neurons.	FLRT3 FLRT1	3.37e-05	4	83	2	31928845
Pubmed	Cooperative polarization of MCAM/CD146 and ERM family proteins in melanoma.	CASKIN2 SPTBN1 CPNE3 FLRT3 DMD PLXNB2 ITGB3	3.40e-05	377	83	7	38117590
Pubmed	Estrogen-regulated feedback loop limits the efficacy of estrogen receptor-targeted breast cancer therapy.	CPEB2 TCTN3 PTPRZ1 GCC2 PKD1 TMX3 PKHD1L1 HYDIN VPS13B	3.84e-05	686	83	9	29987050
Pubmed	TRIM24 is an insulin-responsive regulator of P-bodies.	SPTBN1 PUM2 GIGYF2 PUM1	4.15e-05	80	83	4	35803934
Pubmed	Proteomic Analysis Reveals a Role for RSK in p120-catenin Phosphorylation and Melanoma Cell-Cell Adhesion.	ABI1 LMF2 IPO7 ELMO2 PPP6R2	4.21e-05	160	83	5	31678930
Pubmed	mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.	SPTBN1 CCAR1 PUM2 GIGYF2 PUM1 HNRNPK	5.14e-05	274	83	6	34244482
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	GCC2 PUM2 GIGYF2 CAMTA1 PUM1 VPS13B PLXNA2	5.52e-05	407	83	7	12693553
Pubmed	A novel role of CPEB3 in regulating EGFR gene transcription via association with Stat5b in neurons.	CPEB2 CPEB4	5.60e-05	5	83	2	20639532
Pubmed	PUM1 and PUM2 exhibit different modes of regulation for SIAH1 that involve cooperativity with NANOS paralogues.	PUM2 PUM1	5.60e-05	5	83	2	30269240
Pubmed	Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression.	COL6A2 HMCN1 PLXNB2 PLXNA2 KNG1	6.44e-05	175	83	5	28071719
Pubmed	Pioneering function of Isl1 in the epigenetic control of cardiomyocyte cell fate.	MYOCD DMD PLXNA2	7.43e-05	34	83	3	31024170
Pubmed	The RNA-binding protein Musashi-1 is produced in the developing and adult mouse eye.	PUM2 PUM1	8.39e-05	6	83	2	17768378
Pubmed	ELF a beta-spectrin is a neuronal precursor cell marker in developing mammalian brain; structure and organization of the elf/beta-G spectrin gene.	SPTBN1 DMD	8.39e-05	6	83	2	12149647
Pubmed	Genetic mouse models of autism spectrum disorder present subtle heterogenous cardiac abnormalities.	SHANK3 VPS13B	8.39e-05	6	83	2	35445787
Pubmed	Integrin alpha(v)beta(3) is a pleiotrophin receptor required for pleiotrophin-induced endothelial cell migration through receptor protein tyrosine phosphatase beta/zeta.	PTPRZ1 ITGB3	8.39e-05	6	83	2	19141530
Pubmed	Pumilio proteins utilize distinct regulatory mechanisms to achieve complementary functions required for pluripotency and embryogenesis.	PUM2 PUM1	8.39e-05	6	83	2	32198202
Pubmed	Receptor protein tyrosine phosphatase beta/zeta is a functional binding partner for vascular endothelial growth factor.	PTPRZ1 ITGB3	8.39e-05	6	83	2	25644401
Pubmed	Developmental regulation of biglycan expression in muscle and tendon.	COL6A2 DMD	8.39e-05	6	83	2	16810681
Pubmed	Targeting of αv integrin identifies a core molecular pathway that regulates fibrosis in several organs.	ITGB3 ITGB8	8.39e-05	6	83	2	24216753
Pubmed	A Human Tyrosine Phosphatase Interactome Mapped by Proteomic Profiling.	USP34 IPO7 CPNE3 NUP98 ATL3 GOLIM4 DMD TMX3 PPP6R2 HNRNPK	1.09e-04	974	83	10	28675297
Pubmed	Proteomic identification of common SCF ubiquitin ligase FBXO6-interacting glycoproteins in three kinds of cells.	TCTN3 LMF2 IPO7 SPTBN1 NUP98 PUM1 PLXNB2 HNRNPK	1.10e-04	613	83	8	22268729
Pubmed	Staufen 1 is expressed by neural precursor cells in the developing murine cortex but is dispensable for NPC self-renewal and neuronal differentiation in vitro.	PUM2 PUM1	1.17e-04	7	83	2	34678304
Pubmed	Cooperation between integrin alphavbeta3 and VEGFR2 in angiogenesis.	ITGB3 ITGB8	1.17e-04	7	83	2	19267251
Pubmed	Post-transcriptional gene expression control by NANOS is up-regulated and functionally important in pRb-deficient cells.	PUM2 PUM1	1.17e-04	7	83	2	25100735
Pubmed	Pkd1 and Wnt5a genetically interact to control lymphatic vascular morphogenesis in mice.	PKD1 GOLIM4	1.17e-04	7	83	2	34174014
Pubmed	The E3 ubiquitin ligase and RNA-binding protein ZNF598 orchestrates ribosome quality control of premature polyadenylated mRNAs.	IPO7 SPTBN1 GOLIM4 CCAR1 GIGYF2 RNF40	1.21e-04	320	83	6	28685749
Pubmed	ESCPE-1 mediates retrograde endosomal sorting of the SARS-CoV-2 host factor Neuropilin-1.	USP34 TCTN3 LMF2 GLCE SCAPER GOLIM4 TMX3 PPP6R2 PLXNB2 ITGB8 HNRNPK	1.32e-04	1201	83	11	35696571
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	CPEB2 CELF1 SPTBN1 CPEB4 CCAR1 PUM2 GIGYF2 PUM1 HNRNPK	1.32e-04	807	83	9	22681889
Pubmed	Defining the human deubiquitinating enzyme interaction landscape.	IPO7 CELF1 GCC2 CPNE3 NUP98 SNRNP40 GIGYF2 RNF40 TMX3 PPP6R2	1.40e-04	1005	83	10	19615732
Pubmed	The expression of plexins during mouse embryogenesis.	PLXNB2 PLXNA2	1.56e-04	8	83	2	15661641
Pubmed	A Dynamic Splicing Program Ensures Proper Synaptic Connections in the Developing Cerebellum.	GRIA3 POLQ SHANK3	1.62e-04	44	83	3	32492419
Pubmed	Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors.	USP34 COL6A2 LMF2 GLCE CPEB4 ATL3 GOLIM4 RNF40 RFX1 PLXNB2 TRAPPC9 HNRNPK	1.66e-04	1451	83	12	30550785
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	USP34 IPO7 RNPEP SPTBN1 NUP98 CCAR1 GIGYF2 PUM1	1.69e-04	653	83	8	22586326
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	GLCE CPEB4 SCAPER DELE1 PPP6R2 SHANK3 TRAPPC9	1.81e-04	493	83	7	15368895
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	USP34 CPNE3 CCAR1 ZFHX3 RNF40	1.88e-04	220	83	5	35785414
Pubmed	A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome.	ABI1 IPO7 SPTBN1 OSR2 KLHL41 ECT2 HNRNPK	1.90e-04	497	83	7	23414517
Pubmed	FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.	TRAFD1 KIAA0825 SPTBN1 CCAR1 GIGYF2 PUM1 HYDIN	1.90e-04	497	83	7	36774506
Pubmed	Sertoli cell PUMILIO proteins modulate mouse testis size through translational control of cell cycle regulators.	PUM2 PUM1	2.00e-04	9	83	2	35678316
Pubmed	Alignment of Homologous Chromosomes and Effective Repair of Programmed DNA Double-Strand Breaks during Mouse Meiosis Require the Minichromosome Maintenance Domain Containing 2 (MCMDC2) Protein.	SYCP3 MCMDC2	2.00e-04	9	83	2	27760146
Pubmed	The SH2/SH3 adaptor Grb4 transduces B-ephrin reverse signals.	ABI1 HNRNPK	2.00e-04	9	83	2	11557983
Pubmed	HENA, heterogeneous network-based data set for Alzheimer's disease.	SPTBN1 RNF40 DMD HNRNPK	2.01e-04	120	83	4	31413325
Pubmed	AMPK Interactome Reveals New Function in Non-homologous End Joining DNA Repair.	ZFHX3 TMX3 PPP6R2 SHANK3	2.07e-04	121	83	4	31900314
Pubmed	A central chaperone-like role for 14-3-3 proteins in human cells.	ABI1 CASKIN2 ELMO2 SPTBN1 PKP2 GIGYF2 PUM1 ECT2 TRAPPC9	2.14e-04	861	83	9	36931259
Pubmed	N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.	SPTBN1 INSRR NUP98 CCAR1 ITGB3 HNRNPK	2.28e-04	360	83	6	33111431
Pubmed	Deficiency of CPEB2-Confined Choline Acetyltransferase Expression in the Dorsal Motor Nucleus of Vagus Causes Hyperactivated Parasympathetic Signaling-Associated Bronchoconstriction.	CPEB2 CPEB4	2.50e-04	10	83	2	27810937
Pubmed	Pkd1 regulates lymphatic vascular morphogenesis during development.	PKD1 GOLIM4	2.50e-04	10	83	2	24767999
Pubmed	The mammalian TRIM-NHL protein TRIM71/LIN-41 is a repressor of mRNA function.	PUM2 PUM1	2.50e-04	10	83	2	23125361
Pubmed	Cellular functions of long noncoding RNAs.	PUM2 PUM1	2.50e-04	10	83	2	31048766
Pubmed	Cartography of teneurin and latrophilin expression reveals spatiotemporal axis heterogeneity in the mouse hippocampus during development.	FLRT3 FLRT1	2.50e-04	10	83	2	38713721
Pubmed	USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.	CCAR1 GIGYF2 DMD DNAH5 VPS13B	2.50e-04	234	83	5	36243803
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	USP34 CELF1 SPTBN1 CPNE3 CAMTA1 NCOA4 TMX3 PUM1 VPS13B HNRNPK	2.57e-04	1084	83	10	11544199
Cytoband	22q13.33	LMF2 PPP6R2 PLXNB2	4.59e-05	38	83	3	22q13.33
Cytoband	1p35.2	SNRNP40 PUM1	3.81e-04	16	83	2	1p35.2
Cytoband	8q22.2	OSR2 VPS13B	7.97e-04	23	83	2	8q22.2
Cytoband	3q13.33	SLC15A2 POLQ	1.36e-03	30	83	2	3q13.33
Cytoband	Ensembl 112 genes in cytogenetic band chr22q13	LMF2 PPP6R2 PLXNB2 SHANK3	3.08e-03	330	83	4	chr22q13
GeneFamily	CD molecules\|Integrin beta subunits	ITGB3 ITGB8	3.47e-04	9	57	2	1159
GeneFamily	Plexins	PLXNB2 PLXNA2	3.47e-04	9	57	2	683
GeneFamily	Fibronectin type III domain containing	PTPRZ1 INSRR FLRT3 FLRT1	1.62e-03	160	57	4	555
CoexpressionAtlas	DevelopingGonad_e14.5_ ovary_emap-6699_top-relative-expression-ranked_1000	CPEB2 USP34 ABI1 HMCN1 SPTBN1 CPEB4 CPNE3 SCAPER GIGYF2 SYCP3 PUM1 ECT2 ITGB8	8.16e-06	776	82	13	gudmap_developingGonad_e14.5_ ovary_1000
CoexpressionAtlas	DevelopingGonad_e18.5_ovary_emap-12283_top-relative-expression-ranked_1000	USP34 COL6A2 HMCN1 SPTBN1 CPEB4 CPNE3 SCAPER GIGYF2 SYCP3 CAMTA1 PUM1 ECT2 ITGB8	8.39e-06	778	82	13	gudmap_developingGonad_e18.5_ovary_1000
CoexpressionAtlas	DevelopingGonad_e16.5_ovary_emap-9563_top-relative-expression-ranked_1000	USP34 COL6A2 HMCN1 SPTBN1 CPEB4 CPNE3 GIGYF2 GRIA3 SYCP3 CAMTA1 NCOA4 PUM1 ITGB8	1.06e-05	795	82	13	gudmap_developingGonad_e16.5_ovary_1000
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_1000	CPEB2 SLC15A2 PTPRZ1 NTM CPEB4 SCAPER PUM2 ZFHX3 MYOCD FLRT3 PUM1 VPS13B PLXNA2	1.43e-05	818	82	13	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_500	COL6A2 SPTBN1 CPNE3 OSR2 GRIA3 MYOCD PUM1 ITGB8 PLXNA2	2.67e-05	406	82	9	gudmap_developingGonad_e16.5_epididymis_500
CoexpressionAtlas	DevelopingGonad_e11.5_ovary + mesonephros_emap-3226_top-relative-expression-ranked_500	CPEB4 CPNE3 GIGYF2 ZFHX3 FLRT3 PUM1 ECT2 ITGB8 PLXNA2	3.29e-05	417	82	9	gudmap_developingGonad_e11.5_ovary + mesonephros_500
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_top-relative-expression-ranked_200	COL6A2 SPTBN1 CPNE3 OSR2 MYOCD ITGB8	4.47e-05	166	82	6	gudmap_developingGonad_e18.5_epididymis_200
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_1000	COL6A2 SPTBN1 CPEB4 CPNE3 OSR2 GIGYF2 GRIA3 MYOCD FLRT1 PUM1 ITGB8 PLXNA2	4.91e-05	790	82	12	gudmap_developingGonad_e16.5_epididymis_1000
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_top-relative-expression-ranked_1000	COL6A2 SPTBN1 CPEB4 CPNE3 OSR2 GIGYF2 GRIA3 ZFHX3 FLRT1 PUM1 ITGB8 PLXNA2	5.60e-05	801	82	12	gudmap_developingGonad_e14.5_ epididymis_1000
CoexpressionAtlas	DevelopingGonad_e16.5_ovary_emap-9563_k-means-cluster#1_top-relative-expression-ranked_1000	USP34 COL6A2 HMCN1 NCOA4 PUM1 ITGB8	7.45e-05	182	82	6	gudmap_developingGonad_e16.5_ovary_1000_k1
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#1_top-relative-expression-ranked_1000	SLC15A2 PTPRZ1 NTM ZFHX3 FLRT3	1.02e-04	120	82	5	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k1
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_k-means-cluster#3_top-relative-expression-ranked_1000	COL6A2 OSR2 FLRT1 PUM1 ITGB8	1.15e-04	123	82	5	gudmap_developingGonad_e16.5_epididymis_1000_k3
CoexpressionAtlas	DevelopingGonad_P2_epididymis_emap-30199_top-relative-expression-ranked_500	COL6A2 SPTBN1 CPNE3 OSR2 SP5 MYOCD PUM1 ITGB8	1.43e-04	395	82	8	gudmap_developingGonad_P2_epididymis_500
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_k-means-cluster#4_top-relative-expression-ranked_200	COL6A2 OSR2 ITGB8	1.52e-04	27	82	3	gudmap_developingGonad_e18.5_epididymis_200_k4
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_top-relative-expression-ranked_500	COL6A2 SPTBN1 CPNE3 OSR2 GRIA3 MYOCD PUM1 ITGB8	1.67e-04	404	82	8	gudmap_developingGonad_e18.5_epididymis_500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_top-relative-expression-ranked_1000	CPEB2 HMCN1 SLC15A2 PTPRZ1 NTM OSR2 GIGYF2 GRIA3 ZFHX3 FLRT3 KNG1	1.76e-04	769	82	11	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000
CoexpressionAtlas	DevelopingGonad_P2_ovary_emap-30224_top-relative-expression-ranked_1000	USP34 COL6A2 SPTBN1 CPEB4 CPNE3 SCAPER SYCP3 CAMTA1 PUM1 ECT2 ITGB8	1.78e-04	770	82	11	gudmap_developingGonad_P2_ovary_1000
CoexpressionAtlas	DevelopingKidney_e14.5 whole kidney - Wnt4 KO_emap-6674_k-means-cluster#2_top-relative-expression-ranked_1000	COL6A2 PUM2 MYOCD FLRT3 PLXNA2	2.25e-04	142	82	5	gudmap_developingKidney_e14.5 whole kidney - Wnt4 KO_1000_k2
CoexpressionAtlas	DevelopingLowerUrinaryTract_adult_bladder_emap-29457_k-means-cluster#1_top-relative-expression-ranked_1000	CPEB2 PKP2 MYOCD DMD ITGB3	2.72e-04	148	82	5	gudmap_developingLowerUrinaryTract_adult_bladder_1000_k1
CoexpressionAtlas	DevelopingGonad_e11.5_ovary + mesonephros_emap-3226_top-relative-expression-ranked_1000	PTPRZ1 SPTBN1 CPEB4 CPNE3 GIGYF2 ZFHX3 FLRT3 PUM1 ECT2 ITGB8 PLXNA2	2.90e-04	815	82	11	gudmap_developingGonad_e11.5_ovary + mesonephros_1000
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_top-relative-expression-ranked_100	COL6A2 SPTBN1 OSR2 MYOCD	3.01e-04	83	82	4	gudmap_developingGonad_e18.5_epididymis_100
CoexpressionAtlas	DevelopingGonad_e18.5_ovary_emap-12283_k-means-cluster#4_top-relative-expression-ranked_1000	USP34 COL6A2 HMCN1 PUM1 ITGB8	3.90e-04	160	82	5	gudmap_developingGonad_e18.5_ovary_1000_k4
CoexpressionAtlas	gudmap_RNAseq_p2_Glomerlular Endothelial_2500_K1	CPEB2 LMF2 TRAFD1 SLC15A2 CASKIN2 SPTBN1 PKD1 ATL3 LRRC8B ITGB3 PLXNA2	4.14e-04	850	82	11	gudmap_RNAseq_p2_Glomerlular Endothelial_2500_K1
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_k-means-cluster#4_top-relative-expression-ranked_500	COL6A2 OSR2 PUM1 ITGB8	4.28e-04	91	82	4	gudmap_developingGonad_e16.5_epididymis_500_k4
CoexpressionAtlas	FacebaseRNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_top-relative-expression-ranked_2500_k-means-cluster#4	TRAFD1 KIAA0825 PTPRZ1 HECTD4 CPNE3 FLRT1 DMD PPP6R2 ITGB8 PLXNA2	4.51e-04	721	82	10	Facebase_RNAseq_ratio_e9.5_MandibularArch_vs_MaxillaryArch_2500_K4
CoexpressionAtlas	DevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_200	COL6A2 SPTBN1 OSR2 MYOCD PLXNA2	4.62e-04	166	82	5	gudmap_developingGonad_e16.5_epididymis_200
CoexpressionAtlas	DevelopingGonad_e11.5_ovary + mesonephros_emap-3226_k-means-cluster#4_top-relative-expression-ranked_500	CPEB4 CPNE3 GIGYF2 ECT2 PLXNA2	5.43e-04	172	82	5	gudmap_developingGonad_e11.5_ovary + mesonephros_k4_500
CoexpressionAtlas	ratio_induced-DefinitiveEndoderm_vs_StemCell_top-relative-expression-ranked_100	SP5 FLRT3 LMNTD1 PLXNA2	5.89e-04	99	82	4	PCBC_ratio_DE_vs_SC_100
CoexpressionAtlas	ratio_induced-Mesoderm_vs_StemCell_top-relative-expression-ranked_100	SP5 FLRT3 LMNTD1 PLXNA2	5.89e-04	99	82	4	PCBC_ratio_MESO-5_vs_SC_100
CoexpressionAtlas	FacebaseRNAseq_ratio_e10.5_MaxillaryArch_vs_Mandibular_top-relative-expression-ranked_2500_k-means-cluster#2	TRAFD1 KIAA0825 PTPRZ1 HECTD4 CPNE3 FLRT1 DMD PPP6R2 ITGB8 PLXNA2	5.95e-04	747	82	10	Facebase_RNAseq_ratio_e10.5_MaxillaryArch_vs_Mandibular_2500_K2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ Genital tubercle_emap-6706_k-means-cluster#2_top-relative-expression-ranked_1000	HMCN1 SLC15A2 NTM OSR2 GRIA3 ZFHX3 FLRT3	6.38e-04	377	82	7	gudmap_developingLowerUrinaryTract_e14.5_ Genital tubercle_1000_k2
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000	CPEB4 SCAPER PUM2 MYOCD PUM1 VPS13B PLXNA2	7.22e-04	385	82	7	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlas	DevelopingGonad_e14.5_ epididymis_emap-29141_k-means-cluster#2_top-relative-expression-ranked_1000	COL6A2 OSR2 FLRT1 PUM1 ITGB8	7.36e-04	184	82	5	gudmap_developingGonad_e14.5_ epididymis_1000_k2
CoexpressionAtlas	DevelopingGonad_e18.5_ovary_emap-12283_top-relative-expression-ranked_500	SPTBN1 CPEB4 CPNE3 GIGYF2 SYCP3 PUM1 ITGB8	7.44e-04	387	82	7	gudmap_developingGonad_e18.5_ovary_500
CoexpressionAtlas	DevelopingGonad_e18.5_epididymis_emap-13166_k-means-cluster#5_top-relative-expression-ranked_100	COL6A2 OSR2	7.92e-04	11	82	2	gudmap_developingGonad_e18.5_epididymis_100_k5
ToppCell	droplet-Marrow-nan-3m-Myeloid-granulocyte\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ABCA13 CPEB4 CPNE3 GOLIM4 ZFHX3 NCOA4 ITGB3	3.43e-08	172	83	7	d354424c1f861b6607dfd63b9724f4c237b30275
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HMCN1 ABCA13 MYOCD DMD DNAH5 PKHD1L1 HYDIN	5.45e-08	184	83	7	2cbed6462fea2622871bb7e49b0df3d984239281
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HMCN1 ABCA13 MYOCD DMD DNAH5 PKHD1L1 HYDIN	5.45e-08	184	83	7	ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HMCN1 ABCA13 MYOCD DMD DNAH5 PKHD1L1 HYDIN	5.45e-08	184	83	7	2b19a8c5f823e00812908b23e66bb4e563278aff
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1\|TCGA-Pancreas / Sample_Type by Project: Shred V9	USP34 HMCN1 GCC2 GOLIM4 GIGYF2 NCOA4 VPS13B	5.87e-08	186	83	7	03db813598b67b1e08f759758a1c2023396921fa
ToppCell	droplet-Heart-HEART_(ALL_MINUS_AORTA)-30m-Mesenchymal-nan\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CPEB2 TCTN3 IPO7 NTM GRIA3 ITGB8	1.07e-06	179	83	6	e880c507f11ce75d104593a4ca29f0295f8125e8
ToppCell	droplet-Marrow-nan-3m-Hematologic-megakaryocyte-erythroid_progenitor_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ABCA13 GCC2 SPTBN1 CPNE3 GOLIM4 BTNL9	1.38e-06	187	83	6	14c239af77116d28d511dea754b6150d20488080
ToppCell	kidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	SLC15A2 ABCA13 NTM FLRT3 HYDIN ITGB8	1.65e-06	193	83	6	ffa1932da2979d7b63dbac32eb5788346a3f5b2a
ToppCell	TCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6\|TCGA-Prostate / Sample_Type by Project: Shred V9	USP34 GCC2 GIGYF2 LRRC8B PUM1 VPS13B	1.65e-06	193	83	6	abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCell	facs-Skin-Telogen-3m-Epithelial-bulge_keratinocyte\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A2 HMCN1 GOLIM4 FLRT3 DMD PLXNA2	1.81e-06	196	83	6	90edf61116ffcb4f8b6be3d0a05732d59b0a87d5
ToppCell	facs-Tongue-nan-3m-Epithelial\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IPO7 SPTBN1 GOLIM4 NCOA4 TMX3 HNRNPK	1.92e-06	198	83	6	2f03f8897dd7cce6d8296638e14e11ec16bcf624
ToppCell	facs-Tongue-nan-3m\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IPO7 SPTBN1 GOLIM4 NCOA4 TMX3 HNRNPK	1.92e-06	198	83	6	f2a4057f038ef7225a5b98a7ab068c30dff4eadd
ToppCell	facs-Tongue-nan-3m-Epithelial-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IPO7 SPTBN1 GOLIM4 NCOA4 TMX3 HNRNPK	1.97e-06	199	83	6	8d50e1ee58710d896c0204937331d9f4dcd38de0
ToppCell	facs-Marrow-B-cells-24m-Lymphocytic-precursor_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HMCN1 PTPRZ1 MYOCD PKHD1L1 HYDIN	1.24e-05	160	83	5	c381ec6be8cf887861cc18f831a20db42f953fe1
ToppCell	facs-Marrow-B-cells-24m-Lymphocytic-pre_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	HMCN1 PTPRZ1 MYOCD PKHD1L1 HYDIN	1.24e-05	160	83	5	25c8f3d2a6d14ff0ca0b965fce89d3ff22f40585
ToppCell	5'-GW_trimst-2-LargeIntestine-Mesenchymal-stromal_related\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HMCN1 NTM BTNL9 SLC1A6 HYDIN	1.57e-05	168	83	5	e40a3f85be7e9bb23bfbc1f9cb5e5fc54bb43863
ToppCell	5'-GW_trimst-2-LargeIntestine-Mesenchymal-stromal_related-ICC\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HMCN1 NTM BTNL9 SLC1A6 HYDIN	1.57e-05	168	83	5	b1d6c35a5ae69c8638afd68c2be5bc9ce6fd2659
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Mesenchymal-brain_pericyte\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZFHX3 MYOCD DMD PLXNB2 HYDIN	1.81e-05	173	83	5	2415b6ff49f334da570577d4e93484d024a3dbd5
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Mesenchymal-Pericyte\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZFHX3 MYOCD DMD PLXNB2 HYDIN	1.81e-05	173	83	5	2acd0693a2dfe04e3c1b2125ea63efe92d13150b
ToppCell	Basal_cells-Cryobiopsy_01\|World / lung cells shred on cell class, cell subclass, sample id	HMCN1 KIAA0825 ABCA13 PKD1 MCMDC2	1.86e-05	174	83	5	a0060be3940043015dcc49a5157de5541aed24a1
ToppCell	droplet-Heart-nan-3m\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	IPO7 HMCN1 GOLIM4 MYOCD DMD	1.96e-05	176	83	5	749b47eac5436fa34e0d243ffbc6f1897f4e431e
ToppCell	P15-Epithelial-epithelial_progenitor_cell-epithelial_unknown_3\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	FLRT3 FLRT1 DMD ITGB3 ITGB8	1.96e-05	176	83	5	792f414f5092aba14260b8e16378e793a822498e
ToppCell	5'-Adult-SmallIntestine-Neuronal\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HMCN1 PTPRZ1 NTM FLRT1 ITGB8	2.19e-05	180	83	5	5e6e38ee0758ef2342a6a821c78ed24b57bb7b11
ToppCell	5'-Adult-SmallIntestine-Neuronal-Glial_mature-Adult_Glia\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HMCN1 PTPRZ1 NTM FLRT1 ITGB8	2.19e-05	180	83	5	b88cd7ae922782176c057342d1b9eb9b8e5e7204
ToppCell	5'-Adult-SmallIntestine-Neuronal-Glial_mature\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	HMCN1 PTPRZ1 NTM FLRT1 ITGB8	2.19e-05	180	83	5	ebd6e719a03f25155fa8181be19469d04d6d10a6
ToppCell	COVID-19-Endothelial_cells-Capillary_endothelial_cells\|COVID-19 / group, cell type (main and fine annotations)	CASKIN2 SPTBN1 BTNL9 SHANK3 PLXNA2	2.25e-05	181	83	5	c5f9c92af1384d9089c65afdf41c6feb8345a3ae
ToppCell	3'-Child04-06-SmallIntestine-Epithelial-Tuft-related-Microfold_cell\|Child04-06 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	TRABD2A ABCA13 TM7SF3 INSRR PKP2	2.37e-05	183	83	5	9a2cd63af5f492d46ce80ca1536312e8ac0e7df4
ToppCell	Adult-Epithelial-alveolar_epithelial_cell_type_1-D175\|Adult / Lineage, Cell type, age group and donor	SLC15A2 NTM SPTBN1 FLRT3 DMD	2.49e-05	185	83	5	32b4e68e551d435a732f253f6ad83408c759a642
ToppCell	pdx-Tumor_cells-T0\|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)	CPEB2 HECTD4 DMD PUM1 PPP6R2	2.49e-05	185	83	5	1d874608aa2062024323512f68889219471b2f00
ToppCell	LV-10._Endothelium_II\|World / Chamber and Cluster_Paper	HMCN1 SPTBN1 PKHD1L1 SHANK3 PLXNA2	2.62e-05	187	83	5	7876dcb4800c2e54874df3d933efb79307a64a97
ToppCell	Adult-Endothelial-capillary_endothelial_cell_(Cap1)-D122\|Adult / Lineage, Cell type, age group and donor	CASKIN2 SPTBN1 BTNL9 SHANK3 PLXNA2	2.69e-05	188	83	5	02a62888e9db29d20133eeca1686d302545a39c9
ToppCell	facs-Heart-RA-24m-Mesenchymal-ventricular_myocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CACNA2D2 PKP2 MYOCD KLHL41 LMNTD1	2.76e-05	189	83	5	e758b264c0a47127e33e66c395cf5a3224c7305b
ToppCell	RA-10._Endothelium_II\|World / Chamber and Cluster_Paper	HMCN1 SPTBN1 PKHD1L1 SHANK3 PLXNA2	2.76e-05	189	83	5	75c248b9de5e2fb7a0baa8cdbab516e575cc4394
ToppCell	RA-10._Endothelium_II\|RA / Chamber and Cluster_Paper	HMCN1 SPTBN1 PKHD1L1 SHANK3 PLXNA2	2.76e-05	189	83	5	c81787a8c662db5d7814c583dd64562857629e81
ToppCell	facs-Heart-RA-24m-Mesenchymal-ventricular_cardiomyocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CACNA2D2 PKP2 MYOCD KLHL41 LMNTD1	2.76e-05	189	83	5	b98f60875b1a12b2ec9dc91889298ae57f98602f
ToppCell	COPD-Epithelial-Ciliated\|Epithelial / Disease state, Lineage and Cell class	KIAA0825 ABCA13 DNAH5 LMNTD1 HYDIN	2.76e-05	189	83	5	3e77883db34722b9ce0a03ea74caefc92dc7feff
ToppCell	MatrixFB-Fibroblast-C\|MatrixFB / shred on cell class and cell subclass (v4)	COL6A2 NTM SPTBN1 OSR2 PKHD1L1	2.83e-05	190	83	5	d0106f7a21292f0b96ce4337ec3efbb1bd78dd0a
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CPEB2 ABCA13 DNAH5 HYDIN ITGB8	2.83e-05	190	83	5	3fc9e18c7441c0ae8cda65753cc42d0520f4e116
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	COL6A2 NTM ZFHX3 MYOCD DMD	2.90e-05	191	83	5	04c4d454b57e29a8d1dcdeb4678ce71bdc29b77b
ToppCell	LPS-IL1RA+antiTNF-Stromal_mesenchymal-Lung_smooth_muscle\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL6A2 GRIA3 ZFHX3 MYOCD DMD	2.98e-05	192	83	5	992d08092edbc68c47b945deb8708379738c239a
ToppCell	Smart-start-Cell-Wel_seq-Neoplastic-Differentiated-like-AC-like-AC-like_Prolif-G\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ADORA2A KIAA0825 OSR2 HYDIN ITGB8	2.98e-05	192	83	5	d6f656be2698bd215717d35f4e7ab727c08c61e0
ToppCell	Control-Epithelial-Ciliated\|Epithelial / Disease state, Lineage and Cell class	KIAA0825 ABCA13 DNAH5 LMNTD1 HYDIN	3.05e-05	193	83	5	0e37d454f3735edd936ee9a5f5f516ac3aad400e
ToppCell	NS-moderate-d_0-4\|moderate / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	ABCA13 PTPRZ1 DNAH5 HYDIN PLXNA2	3.05e-05	193	83	5	ea345d34440b25f65358a53dc72831998d1c3620
ToppCell	IPF-Epithelial-Ciliated\|Epithelial / Disease state, Lineage and Cell class	KIAA0825 DMD DNAH5 LMNTD1 HYDIN	3.05e-05	193	83	5	ad58f5080e0ba65c845056ea6b79037b636e9c64
ToppCell	COPD-Endothelial\|COPD / Disease state, Lineage and Cell class	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.05e-05	193	83	5	093b28dcccb5841c995d0b33fae0efd6b88f97e0
ToppCell	COVID-19-Endothelial_cells-Inflamed_endothelial_cells\|COVID-19 / group, cell type (main and fine annotations)	CASKIN2 SPTBN1 BTNL9 SHANK3 PLXNA2	3.05e-05	193	83	5	979ebefa527f86bebeea5d94e626ee6c1cc7d53b
ToppCell	PBMC-Severe-Myeloid-Neutrophil-immature_Neutrophil-Neu_4\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	RNASE2 ABCA13 CEACAM3 CPNE3 POLQ	3.05e-05	193	83	5	ccab6a0c76f574ef7e1d6d5f1e620376daf21bbf
ToppCell	RV-10._Endothelium_II\|World / Chamber and Cluster_Paper	HMCN1 SPTBN1 PKHD1L1 SHANK3 PLXNA2	3.05e-05	193	83	5	2531266bc57339d4e2b22a88817008e32b8c1598
ToppCell	PBMC-Severe-Myeloid-Neutrophil-immature_Neutrophil-Neu_4\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	RNASE2 ABCA13 CEACAM3 CPNE3 POLQ	3.13e-05	194	83	5	23318a1b55895b5166c6151f488a94a09b4627ff
ToppCell	kidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	ABCA13 NTM OSR2 FLRT3 ITGB8	3.13e-05	194	83	5	8ddcaaf24cee6e30d5be52c0cbf778cfba309c53
ToppCell	RA-03._Atrial_Cardiomyocyte\|RA / Chamber and Cluster_Paper	NTM CPEB4 PKP2 MYOCD DMD	3.13e-05	194	83	5	c3535f7cc0076653c72db582047cff053c322397
ToppCell	Adult-Endothelial\|Adult / Lineage, Cell type, age group and donor	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.13e-05	194	83	5	963b3fbee0575af8379baa397ace65949eaf34f7
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Myocytic_interstitial_cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	COL6A2 NTM ZFHX3 MYOCD DMD	3.13e-05	194	83	5	ebb038f94f49f5c655578d1b018676e10c6b7e3c
ToppCell	kidney_cells-Adult_normal_reference-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL6A2 NTM FLRT3 ITGB3 ITGB8	3.29e-05	196	83	5	34e79918a448f6c19b87e1b1ce13c012b24be1f8
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL6A2 NTM ZFHX3 MYOCD DMD	3.29e-05	196	83	5	b8759e6231e0254797d6c30930407b79440c57bb
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_secretory\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	SLC15A2 ABCA13 PTPRZ1 DNAH5 BTNL9	3.29e-05	196	83	5	b07db4a53ab9be9aad6fae5e45f9547db829d096
ToppCell	kidney_cells-Adult_normal_reference-Epithelial-Renal_corpuscle_epithelial_cell-parietal_epithelial_cell-Parietal_Epithelial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL6A2 NTM FLRT3 ITGB3 ITGB8	3.29e-05	196	83	5	8f82e01ca50aa4cd6149547505b4474a02fad618
ToppCell	ILEUM-non-inflamed-(9)_Enteric_neurons\|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	PTPRZ1 NTM FLRT3 FLRT1 ITGB8	3.29e-05	196	83	5	998aa523555ed6bc9c1b5cacbf7ba77c7b218e6b
ToppCell	COPD-Multiplet-Multiplet\|COPD / Disease state, Lineage and Cell class	ABCA13 SPTBN1 DNAH5 LMNTD1 HYDIN	3.29e-05	196	83	5	af4cdc61830685a888a1209826c23bcf54a43084
ToppCell	facs-Skin-Telogen-3m-Epithelial-outer_bulge\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A2 HMCN1 GOLIM4 DMD PLXNA2	3.29e-05	196	83	5	c936014125b2ed5f796221b74acb77b8f8359875
ToppCell	ILEUM-non-inflamed-(9)_Neuro_cell\|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	PTPRZ1 NTM FLRT3 FLRT1 ITGB8	3.29e-05	196	83	5	2b08cd6730119d5dea0152709ab8de580b66cd3c
ToppCell	COPD-Multiplet\|COPD / Disease state, Lineage and Cell class	ABCA13 SPTBN1 DNAH5 LMNTD1 HYDIN	3.29e-05	196	83	5	6d02d494196e3f857d53eea46d9419690d43beca
ToppCell	Tracheal-NucSeq-Epithelial-Epi_airway_secretory-Secretory_Goblet\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	SLC15A2 ABCA13 PTPRZ1 DNAH5 BTNL9	3.29e-05	196	83	5	c366f980cc04abfe1c0c14746c11810c812a42c0
ToppCell	Endothelial\|World / Lineage, Cell type, age group and donor	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.29e-05	196	83	5	96c6d78482a130ce4e29f6629972a06d10d7530e
ToppCell	3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	KIAA0825 DMD DNAH5 LMNTD1 HYDIN	3.37e-05	197	83	5	74a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCell	nucseq-Endothelial\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.37e-05	197	83	5	ebf9be068eaa658493fa7884fd19f34642922acb
ToppCell	10x_3'_v3-tissue-resident_(10x_3'_v3)-myeloid-myeloid_monocytic-monocyte\|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	HMCN1 PTPRZ1 FLRT1 DMD ITGB8	3.37e-05	197	83	5	b2f4d7c301c0b24003374923b31d6d058e40b213
ToppCell	Tracheal-NucSeq\|Tracheal / Cell types per location group and 10X technology with lineage, and cell group designations	USP34 SCAPER DMD TRAPPC9 VPS13B	3.53e-05	199	83	5	94b94b17ca18b8dc27b91da1f2ccf89e03cc7035
ToppCell	control\|World / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	ABCA13 PTPRZ1 SPTBN1 PLXNB2 ITGB8	3.62e-05	200	83	5	97f36d2c197e03d93a1fc59949d77ae90f6e6a9a
ToppCell	Parenchymal-10x5prime-Endothelial\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.62e-05	200	83	5	0e648e9eb96c83a94505d07323785a7a40997eb0
ToppCell	mLN-T_cell-cycling_gd_T\|mLN / Region, Cell class and subclass	PGBD1 GOLIM4 OSR2 POLQ ECT2	3.62e-05	200	83	5	4efeef51f885ee8f6dd3911a536cc49e3c14da98
ToppCell	Lung_Parenchyma-Control-Endothelial\|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.62e-05	200	83	5	41ac6adbf61763aa8a81a0ed586c4a5542a42cc5
ToppCell	mLN-(1)_T_cell-(18)_cycling_gd_T\|mLN / shred on region, Cell_type, and subtype	PGBD1 GOLIM4 OSR2 POLQ ECT2	3.62e-05	200	83	5	e8a0a88a8344e80783931115bbe6cd5b62a4c1f7
ToppCell	Bronchial-10x5prime-Endothelial\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.62e-05	200	83	5	ad34c978cc6b89b4c1c8c9b2fb2a938051b555a0
ToppCell	Biopsy_Control_(H.)-Endothelial\|Biopsy_Control_(H.) / Sample group, Lineage and Cell type	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.62e-05	200	83	5	6a9b6a4b4f204598290ae21c87ddb42ac95dfc4c
ToppCell	Lung_Parenchyma-Control-Endothelial-Endothelial\|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.62e-05	200	83	5	5109b417c066ecca0252008206b4f4b7a14c8702
ToppCell	severe-immature_Neutrophil\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	RNASE2 ABCA13 CEACAM3 CPNE3 POLQ	3.62e-05	200	83	5	5ee43386da8261d2e7602a152e6ba4338d844e08
ToppCell	severe-immature_Neutrophil\|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	RNASE2 ABCA13 CEACAM3 CPNE3 POLQ	3.62e-05	200	83	5	a9b87accdaa6956116ab82427e1330e8f007ef94
ToppCell	Parenchyma_Control_(B.)-Endothelial-TX\|Parenchyma_Control_(B.) / Sample group, Lineage and Cell type	CASKIN2 SPTBN1 BTNL9 PKHD1L1 SHANK3	3.62e-05	200	83	5	9e5627e11288713aa9b622aae40e849dd6eacd29
ToppCell	Club_cells-Donor_08\|World / lung cells shred on cell class, cell subclass, sample id	TCTN3 HMCN1 SLC15A2 NTM	7.52e-05	120	83	4	7f85208f0455f3e634f8e7e81beea60b4ef1d2a5
ToppCell	COVID-19-Epithelial_cells-Airway_mucous\|COVID-19 / group, cell type (main and fine annotations)	ABCA13 DNAH5 LMNTD1 HYDIN	1.82e-04	151	83	4	8216462e723fec2797387929dde095370947e10a
ToppCell	facs-Marrow-B-cells-24m-Myeloid-granulocytopoietic_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RNASE2 ABCA13 GOLIM4 KNG1	1.97e-04	154	83	4	71ffc23a2e02e27cabbdbeaa622e59e9f4a4cd9d
ToppCell	367C-Myeloid-Macrophage-FABP4+_Macrophage_2\|Myeloid / Donor, Lineage, Cell class and subclass (all cells)	ADORA2A ATL3 SYCP3 ITGB8	1.97e-04	154	83	4	6c1e7682c43c40b58b371c58deb10b839700ebcc
ToppCell	facs-Marrow-B-cells-24m-Myeloid-granulocytopoietic_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RNASE2 ABCA13 GOLIM4 KNG1	1.97e-04	154	83	4	46155f36d3983f637b55d7525b675c8828f6ab2e
ToppCell	LPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	PTPRZ1 DNAH5 LMNTD1 HYDIN	2.02e-04	155	83	4	5f1e2195a6b831e1b636f5cc3a282ca423721822
ToppCell	LPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells-Ciliated\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	PTPRZ1 DNAH5 LMNTD1 HYDIN	2.02e-04	155	83	4	0944429459f642a1bcc56edc1ec28aaecde3e2dc
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Myocytic\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	TRABD2A COL6A2 ZFHX3 DMD	2.07e-04	156	83	4	6365b69ede98bc866e996bc52736b00401aacf6f
ToppCell	droplet-Heart-nan-3m-Endothelial-nan\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	GCC2 CPEB4 BTNL9 SHANK3	2.12e-04	157	83	4	d85a2f56ae313baa9738e81d2756ce1fe1ba50db
ToppCell	wk_15-18-Hematologic-Meg-ery-Platelet\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	CPEB4 INSRR LRRC8B PKHD1L1	2.27e-04	160	83	4	768f3cefc3ad4cda229e598cce8bde574cf64bb2
ToppCell	3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-stromal_related\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	TM7SF3 GRIA3 ZFHX3 SLC1A6	2.33e-04	161	83	4	8aaca49b53a551395f4025ac4e535c7b0ce41a49
ToppCell	3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-stromal_related-ICC\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	TM7SF3 GRIA3 ZFHX3 SLC1A6	2.33e-04	161	83	4	deb10628d258fb813c293f81fb71be8e383dc82a
ToppCell	kidney_cells-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell-Distal_Convoluted_Tubule_Cell_Type_2\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	HMCN1 CACNA2D2 CPEB4 KNG1	2.39e-04	162	83	4	36ddebe3bb172c992739353b7b049b2dde98b559
ToppCell	Children_(3_yrs)-Mesenchymal-vascular_smooth_muscle_cell-D032\|Children_(3_yrs) / Lineage, Cell type, age group and donor	TCTN3 COL6A2 MYOCD DMD	2.44e-04	163	83	4	8f24cef152f5965727bbeee116bd26c75cbba82a
ToppCell	renal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	ABCA13 NTM CPEB4 ITGB8	2.50e-04	164	83	4	382e42701779d12a7948690b3be72d06dd75c8b4
ToppCell	PND07-Endothelial-Endothelial_lymphatic-Lymphatic_EC-LEC-LEC_prolif\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	FLRT3 BTNL9 PKHD1L1 PLXNA2	2.56e-04	165	83	4	50a8513d8d2630861499393a7f102b35366bad37
ToppCell	Children_(3_yrs)-Mesenchymal-vascular_smooth_muscle_cell-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	COL6A2 HMCN1 MYOCD DMD	2.56e-04	165	83	4	8a82e20c9b1156bb4bbc16f7785abb04458d671b
ToppCell	TCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma-Serous_Cystadenocarcinoma-5\|TCGA-Ovary / Sample_Type by Project: Shred V9	HECTD4 GIGYF2 PUM1 RFX1	2.62e-04	166	83	4	32d2eaf8a5d03881bf74d680825af2d5110b082d
ToppCell	PBMC-Mild-Myeloid-cDC-cDC-cDC_11\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	CASKIN2 CPNE3 PKP2 DMD	2.62e-04	166	83	4	b1bebcbe17386cb102b11d551e62d46156ce0c68
ToppCell	PBMC-Mild-Myeloid-cDC-cDC-cDC_11\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	CASKIN2 CPNE3 PKP2 DMD	2.68e-04	167	83	4	e44743b20a7435c579d8e999ddc4ca119d6753f2
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial-Lgr5+_amplifying_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PGBD1 ZFHX3 MCMDC2 DMD	2.74e-04	168	83	4	d69452e2cfeb74023b5cf3d09064d7dcad0008ec
Disease	carbohydrate intake measurement	TRAFD1 HECTD4 ZFHX3	1.21e-04	34	83	3	EFO_0010811
Disease	Ventricular Dysfunction	ADORA2A DMD	2.16e-04	8	83	2	C0242973
Disease	plexin-B2 measurement	PPP6R2 PLXNB2	2.78e-04	9	83	2	EFO_0021867
Disease	obesity (implicated_via_orthology)	SLC15A2 PUM2 ZFHX3 PUM1 PLXNB2	3.59e-04	215	83	5	DOID:9970 (implicated_via_orthology)
Disease	cortical surface area measurement	USP34 ABI1 KIAA0825 SPTBN1 CPEB4 PKD1 CCAR1 ZFHX3 PLXNB2 ITGB8 PLXNA2 STPG2	3.71e-04	1345	83	12	EFO_0010736
Disease	Cardiomyopathies	ADORA2A PKP2 MYOCD DMD	5.05e-04	130	83	4	C0878544
Disease	reaction time measurement	PTPRZ1 NTM HECTD4 CCAR1 GIGYF2 ZFHX3 CAMTA1 PLXNA2	5.32e-04	658	83	8	EFO_0008393
Disease	factor XI measurement, fibrinogen measurement, tissue plasminogen activator measurement, factor VII measurement	TRAFD1 HECTD4 KNG1	5.34e-04	56	83	3	EFO_0004619, EFO_0004623, EFO_0004694, EFO_0004791
Disease	Schizophrenia	ADORA2A ABCA13 PTPRZ1 PGBD1 GRIA3 ITGB3 SLC1A6 SHANK3 PLXNA2	8.40e-04	883	83	9	C0036341
Disease	venous thromboembolism, fibrinogen measurement	TRAFD1 HECTD4 SHANK3	9.03e-04	67	83	3	EFO_0004286, EFO_0004623
Disease	Paroxysmal atrial fibrillation	USP34 PKP2 ZFHX3 MYOCD	9.99e-04	156	83	4	C0235480
Disease	familial atrial fibrillation	USP34 PKP2 ZFHX3 MYOCD	9.99e-04	156	83	4	C3468561
Disease	Persistent atrial fibrillation	USP34 PKP2 ZFHX3 MYOCD	9.99e-04	156	83	4	C2585653
Disease	factor XI measurement, Ischemic stroke	HECTD4 KNG1	1.03e-03	17	83	2	EFO_0004694, HP_0002140
Disease	Atrial Fibrillation	USP34 PKP2 ZFHX3 MYOCD	1.10e-03	160	83	4	C0004238
Disease	mucocutaneous lymph node syndrome	PGBD1 ZFHX3 PLXNA2	1.30e-03	76	83	3	EFO_0004246
Disease	selenium measurement, response to dietary selenium supplementation	LRRC8B DNAH5	1.44e-03	20	83	2	EFO_0006331, EFO_0600021
Disease	haptoglobin measurement	ZFHX3 HYDIN	1.59e-03	21	83	2	EFO_0004640
Disease	uric acid measurement	USP34 TRAFD1 SLC15A2 CPEB4 INSRR HECTD4 FLRT1	1.67e-03	610	83	7	EFO_0004761
Disease	cognitive function measurement	USP34 CACNA2D2 CPEB4 CPNE3 GIGYF2 FLRT1 PLXNB2 DNAH5 LMNTD1 SHANK3 HYDIN	2.23e-03	1434	83	11	EFO_0008354
Disease	Ataxia	CACNA2D2 PUM1	2.25e-03	25	83	2	C0004134
Disease	alcohol consumption measurement	ADORA2A CELF1 NTM SPTBN1 SCAPER ZFHX3 CAMTA1 DNAH5 PLXNA2 STPG2	2.52e-03	1242	83	10	EFO_0007878
Disease	azoospermia (implicated_via_orthology)	SCAPER SYCP3	2.62e-03	27	83	2	DOID:14227 (implicated_via_orthology)

Protein segments in the cluster

Peptide	Gene	Start	Entry
LQAQFSLLYNESLQV	RNF40	391	O75150
RSQTFNVVHLYQEQQ	BTNL9	76	Q6UXG8
QVAFNNQIISNSVVF	CAMTA1	936	Q9Y6Y1
SQLHSNVVNYVQQIV	RNPEP	631	Q9H4A4
TFYLQANLSDQILQV	CACNA2D2	646	Q9NY47
NLQNVTNYFVVSLAA	ADORA2A	36	P29274
YQLTQTAALQQQAAA	CCAR1	61	Q8IX12
TLYNQNLLTQQSIGA	CELF1	376	Q92879
TTLYLQNNQINNAGI	FLRT3	61	Q9NZU0
ATQQQTASQYFVLLI	CPNE3	411	O75131
NQEQLTNFSVVQLLF	ABCA13	2191	Q86UQ4
QSLASVAYQINALAN	ABI1	56	Q8IZP0
NQLFTIHYVSNAQLI	GLCE	316	O94923
LEYQNNIIAFYNQLQ	DMD	826	P11532
NYVNILATIIQLFQV	ECT2	466	Q9H8V3
LTVQQLTAAQQQQYA	PUM2	271	Q8TB72
LTAAQQQQYALAAAQ	PUM2	276	Q8TB72
AQQAVLQQHINSLTY	NUP98	496	P52948
LTQCQQQLEQFIATY	MCMDC2	656	Q4G0Z9
EFINTLQFQVTNYCV	KIAA0825	586	Q8IV33
LSNTQTQYSIEIQNV	NTM	91	Q9P121
FRFAVQLYNTNQNTT	GRIA3	51	P42263
FVFNNVQSLLIYNDT	PLXNA2	1121	O75051
VVEQALYQFSNLLNS	PLXNB2	1311	O15031
VLQQTLNYINQGVSH	IPO7	321	O95373
TQINYLNRALDIFNT	NIPA2	231	Q8N8Q9
NHSSIVTQQNQIYVV	KLHL41	336	O60662
HILQQNVNGQTISLY	LMNTD1	176	Q8N9Z9
YQTFVSCQQQQLSFL	ASIC3	261	Q9UHC3
QFQLLSQSNIQQSDY	PTPRZ1	2026	P23471
NLVDALQSLINFQYQ	HECTD4	916	Q9Y4D8
LQLTNYSFLQAVNTF	OSR2	16	Q8N2R0
NTYNQTALDIVNQFT	CASKIN2	251	Q8WXE0
ILSQQQQQQQHRFSY	MYOCD	301	Q8IZQ8
LSNLQYFAVTNNNIE	LRRC8B	701	Q6P9F7
VNVLSNNSLYIADAQ	HMCN1	4486	Q96RW7
VQQLTAAQQQQYALA	PUM1	396	Q14671
QQHQESLSAQLQVVY	GOLIM4	51	O00461
ILVNIQAQNQSITYT	OR7G1	81	Q8NGA0
QQQAQQLYSLLGQFN	NCOA4	86	Q13772
QVENQVQGIYFNITA	ITGB8	391	P26012
NYQELQLQISANVDF	HYDIN	3786	Q4G0P3
NQQSYIAAISARFVQ	CPEB2	491	Q7Z5Q1
QYQQFLIQQQYAQVL	GIGYF2	626	Q6Y7W6
VSNQEIQTYAIALIN	ELMO2	226	Q96JJ3
QLNSFLQGYQTQETV	POLQ	1441	O75417
QFISQLQNEFYLDQV	COL6A2	76	P12110
VTQLQNIIEANSQHY	GCC2	216	Q8IWJ2
IYTNASLLIQNVTQN	CEACAM3	101	P40198
IFIAQVNNYELNLGQ	SLC1A6	436	P48664
TSSVQIYNLSQNIQE	ATL3	166	Q6DD88
NYTLYVLDNQNLQQL	INSRR	411	P14616
NLIFAVTENVVNLYQ	ITGB3	331	P05106
SQNQSNNQFVLYRIT	KNG1	46	P01042
NQQSYIAAISARFVQ	CPEB4	631	Q17RY0
TTLYLQNNQINNAGI	FLRT1	56	Q9NZU1
YLFVITNNTNQGLQA	SLC15A2	581	Q16348
ENYTQNTIQVAIQSL	SCAPER	1206	Q9BY12
IQQLFQLSVSIAFNF	DELE1	236	Q14154
SQILYFQNLEQEINA	DNAH5	1171	Q8TE73
ELSLQQAFSDYQIQQ	PPP6R2	556	O75170
TFQNVVFNVIYQSAA	PKD1	976	P98161
DFAQYQSQIAALLQT	SP5	246	Q6BEB4
VIFQNFLQQAASNQL	TRAFD1	336	O14545
LNQEYSQQFLTLFQQ	SYCP3	121	Q8IZU3
LQVLIIITGNYNFFN	LMF2	261	Q9BU23
ISAQVQQYQQFLDAS	RFX1	566	P22670
TITGTQDQIQNAQYL	HNRNPK	436	P61978
AIQTFQNTYQVLAVT	SNRNP40	186	Q96DI7
TFNLIVNETNNYASQ	PGBD1	431	Q96JS3
NQNTFLLTTFANVVN	RNASE2	66	P10153
GVQQQLQAFNTYRTV	SPTBN1	336	Q01082
VLNTSNQQYFLLDRQ	TMX3	311	Q96JJ7
VRNYNSQTAFQVAII	SHANK3	311	Q9BYB0
FYNVLNNTIIASVRN	STPG2	261	Q8N412
FSQVIFALNQTLLQQ	TRABD2A	221	Q86V40
NILQYNLAVFVQQST	PKHD1L1	2536	Q86WI1
QYQIDLQSINIGTAQ	VPS13B	1626	Q7Z7G8
NVSVQLYNGESQQLI	TRAPPC9	721	Q96Q05
ISQYQNLQSDFSNRV	USP34	3266	Q70CQ2
RFLYQCQSIQDSQQV	TCTN3	521	Q6NUS6
YSQNIYIQNRNIQTD	PKP2	626	Q99959
LQQYQQYQQSLQEAI	ZFHX3	3361	Q15911
NVTFLIFQIHSQYQN	TM7SF3	61	Q9NS93