Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionbicarbonate transmembrane transporter activity

SLC26A4 SLC39A8 SLC4A1 SLC4A10

7.15e-05321404GO:0015106
GeneOntologyMolecularFunctionchloride:bicarbonate antiporter activity

SLC26A4 SLC4A1 SLC4A10

9.16e-05131403GO:0140900
GeneOntologyMolecularFunctionbicarbonate:monoatomic anion antiporter activity

SLC26A4 SLC4A1 SLC4A10

9.16e-05131403GO:0140829
GeneOntologyMolecularFunctionplus-end-directed microtubule motor activity

KIF16B KIF20B KIF3B

2.13e-04171403GO:0008574
GeneOntologyMolecularFunctionprotein kinase inhibitor activity

CDKN1A TRIB2 CIT AHSG DNAJC3

2.63e-04811405GO:0004860
GeneOntologyMolecularFunctionkinase inhibitor activity

CDKN1A TRIB2 CIT AHSG DNAJC3

3.48e-04861405GO:0019210
GeneOntologyMolecularFunctionphosphotransferase activity, alcohol group as acceptor

CDKN1A TRIB2 HK1 ATR SCYL1 CIT CASK STK10 DGKK TBCK PKLR MAP3K13 EIF2AK2 PLK4

4.68e-0470914014GO:0016773
DomainCARMIL_C

CARMIL2 CARMIL3 CARMIL1

3.95e-0731383IPR031943
DomainCARMIL_C

CARMIL2 CARMIL3 CARMIL1

3.95e-0731383PF16000
DomainLRR_6

CARMIL2 CARMIL3 CARMIL1 FBXL7 FBXL2

5.29e-05551385PF13516
DomainARM-type_fold

RALGAPA1 USP34 CAND2 ATR RTTN SCYL1 NCBP1 NOP9 NF1 RIPOR1

2.16e-0433913810IPR016024
DomainKinesin_motor_CS

KIF16B KIF20B KIF3B KIF13A

2.34e-04411384IPR019821
DomainKinesin-like_fam

KIF16B KIF20B KIF3B KIF13A

2.82e-04431384IPR027640
Domain-

KIF16B KIF20B KIF3B KIF13A

3.08e-044413843.40.850.10
DomainKinesin

KIF16B KIF20B KIF3B KIF13A

3.08e-04441384PF00225
DomainKISc

KIF16B KIF20B KIF3B KIF13A

3.08e-04441384SM00129
DomainKINESIN_MOTOR_1

KIF16B KIF20B KIF3B KIF13A

3.08e-04441384PS00411
DomainKinesin_motor_dom

KIF16B KIF20B KIF3B KIF13A

3.08e-04441384IPR001752
DomainKINESIN_MOTOR_2

KIF16B KIF20B KIF3B KIF13A

3.08e-04441384PS50067
DomainAnion_exchange

SLC4A1 SLC4A10

5.34e-0451382IPR001717
DomainKinase-like_dom

TRIB2 ATR SCYL1 CIT CASK STK10 TBCK MACF1 MAP3K13 EIF2AK2 PLK4 SOS1

6.99e-0454213812IPR011009
DomainGAR

GAS2 MACF1

7.97e-0461382PS51460
DomainGAS2

GAS2 MACF1

7.97e-0461382PF02187
Domain-

GAS2 MACF1

7.97e-04613823.30.920.20
DomainGAS_dom

GAS2 MACF1

7.97e-0461382IPR003108
DomainGAS2

GAS2 MACF1

7.97e-0461382SM00243
DomainANION_EXCHANGER_2

SLC4A1 SLC4A10

1.11e-0371382PS00220
DomainANION_EXCHANGER_1

SLC4A1 SLC4A10

1.11e-0371382PS00219
Domain-

CAND2 ATR RTTN SCYL1 NOP9 NF1 RIPOR1

1.33e-0322213871.25.10.10
Domain-

SLC4A1 SLC4A10

1.89e-03913823.40.1100.10
DomainBand3_cytoplasmic_dom

SLC4A1 SLC4A10

1.89e-0391382IPR013769
DomainBand_3_cyto

SLC4A1 SLC4A10

1.89e-0391382PF07565
DomainPkinase

TRIB2 SCYL1 CIT CASK STK10 TBCK MAP3K13 EIF2AK2 PLK4

2.12e-033811389PF00069
DomainPTrfase/Anion_transptr

SLC4A1 SLC4A10

2.35e-03101382IPR016152
DomainHCO3_transpt_euk

SLC4A1 SLC4A10

2.35e-03101382IPR003020
DomainHCO3_cotransp

SLC4A1 SLC4A10

2.35e-03101382PF00955
DomainHCO3_transpt_C

SLC4A1 SLC4A10

2.35e-03101382IPR011531
Domain-

CARMIL2 CARMIL3 PRAMEF22 CARMIL1 FBXL7 TLR1 SLIT3 FBXL2

2.69e-0332113883.80.10.10
DomainL_dom-like

CARMIL2 CARMIL3 PRAMEF22 CARMIL1 FBXL7 TLR1 SLIT3 FBXL2

3.06e-033281388IPR032675
DomainARM-like

CAND2 ATR RTTN SCYL1 NOP9 NF1 RIPOR1

3.97e-032701387IPR011989
DomainLeu-rich_rpt

CARMIL2 CARMIL3 CARMIL1 FBXL7 TLR1 SLIT3 FBXL2

4.05e-032711387IPR001611
DomainPH

ARHGEF11 CIT DGKK PLCL2 OSBP2 ARHGAP20 SOS1

4.65e-032781387SM00233
DomainPH_DOMAIN

ARHGEF11 CIT DGKK PLCL2 OSBP2 ARHGAP20 SOS1

4.74e-032791387PS50003
DomainPH_domain

ARHGEF11 CIT DGKK PLCL2 OSBP2 ARHGAP20 SOS1

4.83e-032801387IPR001849
DomainWW

CMTR1 WWC2 SMURF2

5.05e-03471383PF00397
DomainSialyl_trans

ST3GAL5 ST8SIA5

5.34e-03151382IPR012163
DomainWW

CMTR1 WWC2 SMURF2

5.35e-03481383SM00456
DomainHEAT

CAND2 ATR SCYL1

5.35e-03481383PF02985
DomainWW_DOMAIN_1

CMTR1 WWC2 SMURF2

6.34e-03511383PS01159
DomainWW_DOMAIN_2

CMTR1 WWC2 SMURF2

6.34e-03511383PS50020
DomainWW_dom

CMTR1 WWC2 SMURF2

6.70e-03521383IPR001202
Pubmed

Functional proteomics mapping of a human signaling pathway.

STBD1 SENP3 LAMA5 HBP1 ZNF518A CASK METAP1 OPTN KIF3B NUP155 MCM3AP PLCL2 SECISBP2 MACF1 KIF13A SMURF2

2.98e-095911421615231748
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

ABCF1 ATR SENP3 PARG ANKRD50 ANKHD1 INTS3 CLSTN1 NOP9 GTPBP2 NUP155 TUBGCP3 TANC1 MICU2 CLEC16A PALLD

1.14e-086501421638777146
Pubmed

Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.

USP34 HK1 CCDC30 WDR7 PPFIA1 SENP3 WRN SCYL1 CCT4 ANKRD50 CASK EFTUD2 GTPBP2 NUP155 PKLR AHSG CLEC16A

2.16e-087771421735844135
Pubmed

Cell Migration and Invadopodia Formation Require a Membrane-binding Domain of CARMIL2.

CARMIL2 CARMIL3 CARMIL1

6.66e-083142326578515
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

THOC1 ABCF1 ATR CARMIL1 PARG INTS3 SIRT1 TBC1D9 EFTUD2 FANCD2 STK10 WWC2 NF1 WDHD1 RIPOR1 SOS1

1.25e-077741421615302935
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

USP34 ABCF1 HK1 RPLP1 PPFIA1 SCYL1 NCBP1 CCT4 TSEN2 SIRT1 LARP7 EFTUD2 FANCD2 OPTN NUP155 WDHD1 MACF1 RIPOR1 DCTN4 KIF13A PLOD2

5.06e-0714551422122863883
Pubmed

Functional interaction between the Fanconi Anemia D2 protein and proliferating cell nuclear antigen (PCNA) via a conserved putative PCNA interaction motif.

CDKN1A FANCD2 BRCA2

6.62e-075142319704162
Pubmed

Distinct roles for CARMIL isoforms in cell migration.

CARMIL2 CARMIL3 CARMIL1

6.62e-075142319846667
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

RALGAPA1 ABCF1 HK1 CAND2 STBD1 PPFIA1 MRPL44 CYP51A1 KIF16B SIRT1 LARP7 CASK EFTUD2 NUP155 TUBGCP3 MACF1 TANC1 PLOD2 ANKRD52 DNAJC3 VPS13B

7.18e-0714871422133957083
Pubmed

ETAA1 acts at stalled replication forks to maintain genome integrity.

ATR WRN FANCD2 BRCA2

1.51e-0621142427723720
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

RALGAPA1 ABCF1 HK1 CARMIL2 BTBD8 RPLP1 WDR7 CARMIL1 PPFIA1 CCT4 ARHGEF11 CIT SLC4A1 CASK NF1 SLC4A10 MACF1 TANC1 SSH2 DCTN4

1.59e-0614311422037142655
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

RALGAPA1 USP34 CAND2 KIF16B LAMA5 ANKRD50 ANKHD1 METAP1 FBXL7 NUP155 SLIT3 ARHGAP20

1.97e-065291421214621295
Pubmed

Mapping the Genetic Landscape of Human Cells.

RPLP1 WDR7 SCYL1 NCBP1 NOL10 INTS3 CIT TSEN2 MCM3AP TUBGCP3 DCTN4

2.69e-064511421130033366
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

ABCF1 HK1 SENP3 CCT4 NOL10 ANKHD1 KIF20B EFTUD2 ACSL4 NF1 NUP155 MCM3AP TUBGCP3 MACF1 TANC1 DCTN4 ANKRD52 EIF2AK2 PALLD

2.78e-0613531421929467282
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

USP34 ABCF1 HK1 RPLP1 NCBP1 NOL10 ANKHD1 LARP7 NF1 NUP155 MCM3AP MACF1 ANKRD52

3.05e-066531421322586326
Pubmed

ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.

THOC1 ABCF1 NCBP1 ARHGEF11 CIT KRT80 CASK EFTUD2 METAP1 NUP155 MACF1 SSH2 EIF2AK2

3.42e-066601421332780723
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

ATR PPFIA1 SENP3 NCBP1 CCT4 INTS3 EFTUD2 FANCD2 NF1 NUP155 TUBGCP3 MACF1

5.21e-065821421220467437
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

RALGAPA1 ELP5 PPFIA1 NCBP1 CCT4 NOL10 CASK FANCD2 ACSL4 WWC2 NUP155 PLCL2 TANC1 SSH2 ANKRD52 PLK4

6.52e-0610491421627880917
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

BTBD8 WDR7 KIAA0232 KIF3B MCM3AP PLCL2 MACF1 RIPOR1 CLEC16A VPS13B

7.27e-064071421012693553
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

RALGAPA1 CARMIL2 KIAA0232 CARMIL1 PPFIA1 WWC2 OPTN NF1 MACF1 TANC1 SSH2 KIF13A PLK4 PALLD

1.26e-058611421436931259
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

USP34 PPFIA1 ANKHD1 SIRT1 LARP7 SLC4A1 ZNF518A FANCD2 GTPBP2 SH3TC1 MCM3AP TUBGCP3 MACF1 TANC1 ANKRD52 SOS1

1.40e-0511161421631753913
Pubmed

Generation and annotation of the DNA sequences of human chromosomes 2 and 4.

TRIB2 CCT4 NOL10 ST3GAL5 DAW1 TBCK SLC4A10 CD302 EIF2AK2 PALLD

1.48e-054421421015815621
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

THOC1 ABCF1 MRPL44 SENP3 WRN NCBP1 NOL10 KIF20B LARP7 NOP9 NUP155 MACF1 EIF2AK2

1.52e-057591421335915203
Pubmed

Protein-protein interactions between large proteins: two-hybrid screening using a functionally classified library composed of long cDNAs.

ARHGEF11 CLSTN1 TSEN2 MCM3AP PLCL2 MACF1

1.64e-05130142612421765
Pubmed

WRN rescues replication forks compromised by a BRCA2 deficiency: Predictions for how inhibition of a helicase that suppresses premature aging tilts the balance to fork demise and chromosomal instability in cancer.

WRN BRCA2

1.66e-052142235751457
Pubmed

ANKHD1 represses p21 (WAF1/CIP1) promoter and promotes multiple myeloma cell growth.

CDKN1A ANKHD1

1.66e-052142225483783
Pubmed

Werner's syndrome protein is phosphorylated in an ATR/ATM-dependent manner following replication arrest and DNA damage induced during the S phase of the cell cycle.

ATR WRN

1.66e-052142212629512
Pubmed

The human papillomavirus type 16 E7 oncoprotein activates the Fanconi anemia (FA) pathway and causes accelerated chromosomal instability in FA cells.

FANCD2 BRCA2

1.66e-052142217898070
Pubmed

Werner Helicase Control of Human Papillomavirus 16 E1-E2 DNA Replication Is Regulated by SIRT1 Deacetylation.

WRN SIRT1

1.66e-052142230890607
Pubmed

Sirtuin-mediated deacetylation pathway stabilizes Werner syndrome protein.

WRN SIRT1

1.66e-052142218588880
Pubmed

Partial pyruvate kinase deficiency aggravates the phenotypic expression of band 3 deficiency in a family with hereditary spherocytosis.

SLC4A1 PKLR

1.66e-052142225388786
Pubmed

BRCA/Fanconi anemia pathway implicates chemoresistance to gemcitabine in biliary tract cancer.

FANCD2 BRCA2

1.66e-052142225736055
Pubmed

Nucleoporin Nup155 is part of the p53 network in liver cancer.

CDKN1A NUP155

1.66e-052142231089132
Pubmed

Homozygous germ line mutation in exon 27 of murine Brca2 disrupts the Fancd2-Brca2 pathway in the homologous recombination-mediated DNA interstrand cross-links' repair but does not affect meiosis.

FANCD2 BRCA2

1.66e-052142216127665
Pubmed

LARP7 upregulates SIRT1 deacetylase activity and inhibits Th1/Th17 cytokine response in psoriatic mice.

SIRT1 LARP7

1.66e-052142237937491
Pubmed

Regulation of two renal chloride transporters, AE1 and pendrin, by electrolytes and aldosterone.

SLC26A4 SLC4A1

1.66e-052142223383138
Pubmed

ATR controls the p21(WAF1/Cip1) protein up-regulation and apoptosis in response to low UV fluences.

CDKN1A ATR

1.66e-052142221976111
Pubmed

WRN translocation from nucleolus to nucleoplasm is regulated by SIRT1 and required for DNA repair and the development of chemoresistance.

WRN SIRT1

1.66e-052142225801465
Pubmed

Sirt1-inducible deacetylation of p21 promotes cardiomyocyte proliferation.

CDKN1A SIRT1

1.66e-052142231881009
Pubmed

WRN helicase safeguards deprotected replication forks in BRCA2-mutated cancer cells.

WRN BRCA2

1.66e-052142234772932
Pubmed

Microcell mediated chromosome transfer maps the Fanconi anaemia group D gene to chromosome 3p.

FANCD2 BRCA2

1.66e-05214227581463
Pubmed

ATR couples FANCD2 monoubiquitination to the DNA-damage response.

ATR FANCD2

1.66e-052142215314022
Pubmed

Positional cloning of a novel Fanconi anemia gene, FANCD2.

FANCD2 BRCA2

1.66e-052142211239453
Pubmed

Human kidney anion exchanger 1 interacts with kinesin family member 3B (KIF3B).

SLC4A1 KIF3B

1.66e-052142221871436
Pubmed

TRIM65 regulates microRNA activity by ubiquitination of TNRC6.

PPFIA1 NCBP1 ANKHD1 SIRT1 LARP7 FANCD2 GTPBP2 NUP155 EIF2AK2

2.01e-05364142924778252
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

THOC1 ABCF1 HK1 RPLP1 ATR MRPL44 NCBP1 CCT4 NOL10 ANKHD1 LARP7 EFTUD2 FANCD2 NOP9 NF1 NUP155 GALNT5 EIF2AK2

2.16e-0514251421830948266
Pubmed

Transcription factor Foxp3 and its protein partners form a complex regulatory network.

ATR SENP3 CCT4 NOL10 INTS3 KIF20B ACSL4 NUP155 TUBGCP3

2.28e-05370142922922362
Pubmed

The Functional Proximal Proteome of Oncogenic Ras Includes mTORC2.

RALGAPA1 CARMIL2 CARMIL1 PPFIA1 KIF16B CASK STK10 OPTN NF1 TANC1 VPS13B

2.36e-055691421130639242
Pubmed

Defining the membrane proteome of NK cells.

ABCF1 CARMIL2 CNST CYP51A1 SCYL1 CIT ITGB7 EFTUD2 ACSL4 KIF3B NF1 NUP155 TUBGCP3 CD302 EIF2AK2 DNAJC3

2.44e-0511681421619946888
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

USP34 ZGRF1 KIF20B SIRT1 BRCA2 PLA2G12A MCM3AP SECISBP2 MACF1 TANC1 ANKRD52

3.19e-055881421138580884
Pubmed

Elucidation of the Fanconi Anemia Protein Network in Meiosis and Its Function in the Regulation of Histone Modifications.

ATR FANCD2 BRCA2

3.59e-0516142327760317
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

RALGAPA1 KIZ KIAA0232 CARMIL1 INTS3 TSEN2 CASK STK10 SH3TC1 GALNT11 TBCK MACF1 RIPOR1 TANC1 CLEC16A DNAJC3 SMURF2 VPS13B

3.83e-0514891421828611215
Pubmed

Impaired plasma membrane localization of ubiquitin ligase complex underlies 3-M syndrome development.

ABCF1 RTTN LAMA5 NOL10 LARP7 CASK GTPBP2 MACF1 POLQ EIF2AK2

3.95e-054961421031343991
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

ABCF1 PPFIA1 SENP3 WRN LAMA5 CCT4 NOL10 ANKHD1 ARHGEF11 CIT KIF20B LARP7 CASK METAP1 MACF1 TANC1 MICU2 EIF2AK2

4.11e-0514971421831527615
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

WDR7 NHSL2 PPFIA1 SENP3 CCT4 ARHGEF11 CIT CASK EFTUD2 FRY KIF3B NF1 MACF1 SSH2

4.28e-059631421428671696
Pubmed

C5orf51 is a component of the MON1-CCZ1 complex and controls RAB7A localization and stability during mitophagy.

RALGAPA1 STBD1 WDR7 CYP51A1 KIF16B ANKRD50 ACSL4 NUP155 DCTN4 VPS13B

4.51e-055041421034432599
Pubmed

Comparative interactome analysis of α-arrestin families in human and Drosophila.

CAND2 KIF16B LAMA5 NCBP1 FANCD2 GTPBP2 NF1 WDHD1

4.65e-05313142838270169
Pubmed

Single nucleotide polymorphisms of matrix metalloproteinase 9 (MMP9) and tumor protein 73 (TP73) interact with Epstein-Barr virus in chronic lymphocytic leukemia: results from the European case-control study EpiLymph.

CDKN1A ABCF1 CASR NF1 TLR1 EIF2AK2 SOS1

4.84e-05231142721048031
Pubmed

Fanconi anemia complementation group D2 (FANCD2) functions independently of BRCA2- and RAD51-associated homologous recombination in response to DNA damage.

FANCD2 BRCA2

4.95e-053142215671039
Pubmed

Age-Associated Sirtuin 1 Reduction in Vascular Smooth Muscle Links Vascular Senescence and Inflammation to Abdominal Aortic Aneurysm.

CDKN1A SIRT1

4.95e-053142227650558
Pubmed

WRN helicase regulates the ATR-CHK1-induced S-phase checkpoint pathway in response to topoisomerase-I-DNA covalent complexes.

ATR WRN

4.95e-053142222159421
Pubmed

Tribbles Pseudokinase 2 Promotes the Proliferation, Migration, and Invasion of Osteosarcoma through Modulating AP4/p21 Pathway.

CDKN1A TRIB2

4.95e-053142235777810
Pubmed

SH3 domains of the adapter molecule Grb2 complex with two proteins in T cells: the guanine nucleotide exchange protein Sos and a 75-kDa protein that is a substrate for T cell antigen receptor-activated tyrosine kinases.

SIGLEC7 SOS1

4.95e-05314228188688
Pubmed

Fanconi anemia complementation group FANCD2 protein serine 331 phosphorylation is important for fanconi anemia pathway function and BRCA2 interaction.

FANCD2 BRCA2

4.95e-053142219861535
Pubmed

Characterisation of the interaction between syndecan-2, neurofibromin and CASK: dependence of interaction on syndecan dimerization.

CASK NF1

4.95e-053142220006588
Pubmed

Lysyl hydroxylase 2 induces a collagen cross-link switch in tumor stroma.

CDKN1A PLOD2

4.95e-053142225664850
Pubmed

Impairment of energy sensors, SIRT1 and AMPK, in lipid induced inflamed adipocyte is regulated by Fetuin A.

SIRT1 AHSG

4.95e-053142229030114
Pubmed

A transgenic insertion causing cryptorchidism in mice.

FRY BRCA2

4.95e-053142211353515
Pubmed

Homologous-recombination-deficient tumours are dependent on Polθ-mediated repair.

FANCD2 POLQ

4.95e-053142225642963
Pubmed

Regulation of WRN protein cellular localization and enzymatic activities by SIRT1-mediated deacetylation.

WRN SIRT1

4.95e-053142218203716
Pubmed

Neurofibromatosis with male breast cancer--risk factor or co-incidence? Report of two rare cases.

NF1 BRCA2

4.95e-053142225267367
Pubmed

Bipartite interaction between neurofibromatosis type I protein (neurofibromin) and syndecan transmembrane heparan sulfate proteoglycans.

CASK NF1

4.95e-053142211356864
Pubmed

Remodeling of Interstrand Crosslink Proximal Replisomes Is Dependent on ATR, FANCM, and FANCD2.

ATR FANCD2

4.95e-053142231067464
Pubmed

Protein phosphorylation and expression profiling by Yin-yang multidimensional liquid chromatography (Yin-yang MDLC) mass spectrometry.

USP34 GVINP1

4.95e-053142217203969
Pubmed

Orphan nuclear receptor TLX functions as a potent suppressor of oncogene-induced senescence in prostate cancer via its transcriptional co-regulation of the CDKN1A (p21(WAF1) (/) (CIP1) ) and SIRT1 genes.

CDKN1A SIRT1

4.95e-053142225557355
Pubmed

Mechanism of RAD51-dependent DNA interstrand cross-link repair.

FANCD2 BRCA2

4.95e-053142221719678
Pubmed

Expression and localization of Werner syndrome protein is modulated by SIRT1 and PML.

WRN SIRT1

4.95e-053142217996922
Pubmed

Protease-activated receptor-1 inhibits proliferation but enhances leukemia stem cell activity in acute myeloid leukemia.

CDKN1A F2R

4.95e-053142227819671
Pubmed

Nedd8-activating enzyme inhibitor MLN4924 provides synergy with mitomycin C through interactions with ATR, BRCA1/BRCA2, and chromatin dynamics pathways.

ATR BRCA2

4.95e-053142224672057
Pubmed

Phosphorylation of FANCD2 on two novel sites is required for mitomycin C resistance.

ATR FANCD2

4.95e-053142216943440
Pubmed

Regulation of the Fanconi Anemia DNA Repair Pathway by Phosphorylation and Monoubiquitination.

ATR FANCD2

4.95e-053142234828369
Pubmed

Adaptation by the collecting duct to an exogenous acid load is blunted by deletion of the proton-sensing receptor GPR4.

CASR SLC4A1

4.95e-053142225972512
Pubmed

The Fanconi Anemia Pathway Protects Genome Integrity from R-loops.

FANCD2 BRCA2

4.95e-053142226584049
Pubmed

Differential roles for Chk1 and FANCD2 in ATR-mediated signalling for psoralen photoactivation-induced senescence.

ATR FANCD2

4.95e-053142221995812
Pubmed

The P58 cellular inhibitor complexes with the interferon-induced, double-stranded RNA-dependent protein kinase, PKR, to regulate its autophosphorylation and activity.

EIF2AK2 DNAJC3

4.95e-05314228576172
Pubmed

TRIB2 functions as novel oncogene in colorectal cancer by blocking cellular senescence through AP4/p21 signaling.

CDKN1A TRIB2

4.95e-053142230541550
Pubmed

Studies of protein-protein interactions in Fanconi anemia pathway to unravel the DNA interstrand crosslink repair mechanism.

FANCD2 BRCA2

4.95e-053142228684355
Pubmed

Effects of mesenchymal stem cell-derived exosomes on oxidative stress responses in skin cells.

CDKN1A SIRT1

4.95e-053142234145535
Pubmed

Tumorigenic effect of nonfunctional p53 or p21 in mice mutant in the Werner syndrome helicase.

CDKN1A WRN

4.95e-053142211280729
Pubmed

FANCD2 Maintains Fork Stability in BRCA1/2-Deficient Tumors and Promotes Alternative End-Joining DNA Repair.

FANCD2 BRCA2

4.95e-053142227264184
Pubmed

Epithelial cancer in Fanconi anemia complementation group D2 (Fancd2) knockout mice.

FANCD2 BRCA2

4.95e-053142212893777
Pubmed

Developmental expression of Brca2 colocalizes with Brca1 and is associated with proliferation and differentiation in multiple tissues.

CDKN1A BRCA2

4.95e-05314229133444
Pubmed

Differential B cell expression of mouse Fc receptor homologs.

FCRL1 FCRL5

4.95e-053142215302849
Pubmed

Interactome Analysis of the Nucleocapsid Protein of SARS-CoV-2 Virus.

CAND2 MRPL44 LAMA5 LARP7 MACF1 EIF2AK2

5.09e-05159142634578187
Pubmed

Architectural niche organization by LHX2 is linked to hair follicle stem cell function.

KRT40 MACF1 PALLD

5.20e-0518142324012369
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

CMTR1 SENP3 PARG ANKHD1 INTS3 CREB5 LARP7 ACSL4 NOP9 WDHD1 SH3TC1 PLOD2 ANKRD52

5.30e-058571421325609649
Pubmed

Prediction of the coding sequences of unidentified human genes. VII. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.

ARHGEF11 ZNF518A KIF3B MICU2 CLEC16A

7.03e-0510414259205841
Pubmed

Prediction of the coding sequences of unidentified human genes. IX. The complete sequences of 100 new cDNA clones from brain which can code for large proteins in vitro.

USP34 WDR7 LAMA5 MCM3AP VPS13B

7.35e-0510514259628581
Pubmed

The DNA sequence and analysis of human chromosome 13.

FRY BRCA2 TUBGCP3 TGDS MICU2 DNAJC3

7.38e-05170142615057823
Pubmed

Programmed cell senescence during mammalian embryonic development.

CDKN1A ATR SLC26A4

8.40e-0521142324238962
InteractionCDC5L interactions

THOC1 CDKN1A CMTR1 ATR PPFIA1 SENP3 WRN CCT4 INTS3 CIT LARP7 EFTUD2 FANCD2 NF1 NUP155 TUBGCP3 MACF1 MAP3K13 EIF2AK2

8.26e-0685514119int:CDC5L
InteractionHELQ interactions

ATR FANCD2 BRCA2 POLQ

1.02e-05201414int:HELQ
InteractionRAC1 interactions

RALGAPA1 CARMIL2 CARMIL1 PPFIA1 ARHGEF11 CIT CASK FANCD2 STK10 OPTN NF1 NUP155 MCM3AP KRT40 MACF1 TANC1 ARHGAP20 PLOD2 EIF2AK2 SMURF2 SOS1

1.59e-05106314121int:RAC1
Cytoband2q24.2

SLC4A10 CD302 TANC1

4.27e-052214232q24.2
Cytoband3p25.2

CAND2 TSEN2

5.13e-041114223p25.2
CytobandEnsembl 112 genes in cytogenetic band chr2q24

SLC4A10 CD302 TANC1 GALNT5

6.75e-041271424chr2q24
Cytoband13q32.1

TGDS DNAJC3

1.11e-0316142213q32.1
Cytoband4q25

ZGRF1 LARP7 PLA2G12A

1.20e-036714234q25
Cytoband17q21.2

DHX58 KRT222 KRT40

1.36e-0370142317q21.2
GeneFamilyKinesins|Pleckstrin homology domain containing

KIF16B KIF20B KIF3B KIF13A

9.07e-0546934622
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

USP34 ATR WDR7 PPFIA1 PARG WRN KIF20B CREB5 CASK ACSL4 STK10 FBXL7 WDHD1 BRCA2 ST3GAL5 TUBGCP3 MACF1 MICU2 PLOD2 CLEC16A SMURF2 VPS13B SOS1

2.35e-1085614223M4500
CoexpressionHOEBEKE_LYMPHOID_STEM_CELL_UP

USP34 TRIB2 ATR NF1 SH3TC1 MCM3AP MACF1 PALLD

5.86e-08971428M14698
CoexpressionHALLMARK_MITOTIC_SPINDLE

ARHGEF11 KIF20B KIF3B NF1 BRCA2 TUBGCP3 SSH2 PALLD SOS1

1.46e-061991429M5893
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

ATR PPFIA1 KIF16B WRN ZNF302 ANKHD1 KIF20B TBC1D9 LARP7 OPTN WDHD1 MICU2 POLQ DNAJC3 PALLD

2.94e-0665614215M18979
CoexpressionFISCHER_DREAM_TARGETS

THOC1 ELP5 ZGRF1 RTTN CYP51A1 WRN NCBP1 CIT KIF20B LARP7 ZNF518A FANCD2 GTPBP2 NUP155 WDHD1 BRCA2 POLQ PLK4

5.31e-0696914218M149
CoexpressionDODD_NASOPHARYNGEAL_CARCINOMA_UP

THOC1 COL6A3 ATR SNHG12 ZGRF1 WRN NCBP1 CCT4 FAM200A F2R KIF20B CASK ACSL4 NTAN1 NF1 NUP155 WDHD1 BRCA2 GALNT11 POLQ EIF2AK2 PLK4

7.10e-06140714222M14427
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN

ATR WDR7 PPFIA1 PARG WRN KIF20B CASK FBXL7 TUBGCP3 CLEC16A SMURF2 SOS1

9.36e-0646614212M13522
CoexpressionLAZARO_GENETIC_MOUSE_MODEL_HIGH_GRADE_LARGE_CELL_NEUROENDOCRINE_LUNG_CARCINOMA_UP

CDKN1A ZGRF1 CIT KIF20B FANCD2 NUP155 WDHD1 BRCA2 POLQ EIF2AK2 PLK4

1.28e-0540214211MM454
CoexpressionGSE21360_PRIMARY_VS_QUATERNARY_MEMORY_CD8_TCELL_DN

TRIB2 CMTR1 ZNF302 GALNT11 MCM3AP MACF1 SMURF2 VPS13B

1.30e-051981428M7610
CoexpressionGSE27786_NEUTROPHIL_VS_MONO_MAC_DN

PPFIA1 SIRT1 TBC1D9 NUP155 BRCA2 SH3TC1 TLR1 DNAJC3

1.35e-051991428M4883
CoexpressionHOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP

CDKN1A CIT ITGB7 WDHD1 BRCA2 EIF2AK2 PLK4

2.07e-051531427M5588
CoexpressionHOFFMANN_LARGE_TO_SMALL_PRE_BII_LYMPHOCYTE_UP

CDKN1A CIT ITGB7 WDHD1 BRCA2 EIF2AK2 PLK4

2.25e-051551427MM1259
CoexpressionGSE3920_UNTREATED_VS_IFNG_TREATED_FIBROBLAST_UP

ABCF1 HK1 CARMIL1 TMEM104 CLSTN1 FBXL7 ANKRD52

3.49e-051661427M6688
CoexpressionMARKEY_RB1_CHRONIC_LOF_UP

CDKN1A COL6A3 CYP51A1 GAS2 WDHD1 BRCA2

3.75e-051141426M2895
CoexpressionMARKEY_RB1_CHRONIC_LOF_UP

CDKN1A COL6A3 CYP51A1 GAS2 WDHD1 BRCA2

4.14e-051161426MM1090
CoexpressionACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_UP

RPLP1 CYP51A1 FAM200A ACSL4 NTAN1 DCTN4 MICU2

4.55e-051731427M2480
CoexpressionGSE6269_STAPH_AUREUS_VS_STREP_PNEUMO_INF_PBMC_UP

SLC26A4 WWC2 OPTN NTAN1 NF1 EIF2AK2 HDC

5.07e-051761427M5663
CoexpressionBOSCO_INTERFERON_INDUCED_ANTIVIRAL_MODULE

DHX58 CMTR1 SLC39A8 ST3GAL5 EIF2AK2

6.68e-05781425M2532
CoexpressionPUJANA_CHEK2_PCC_NETWORK

ATR PARG WRN NCBP1 CCT4 KIF20B LARP7 METAP1 NF1 WDHD1 BRCA2 TUBGCP3 TGDS PLK4

6.99e-0576114214M11961
CoexpressionGSE21670_UNTREATED_VS_TGFB_IL6_TREATED_CD4_TCELL_UP

USP34 ZNF518A WDHD1 PLCL2 POLQ PLK4 PALLD

9.35e-051941427M7467
CoexpressionGSE19401_PLN_VS_PEYERS_PATCH_FOLLICULAR_DC_UP

THOC1 USP34 TRIB2 INTS3 PLCL2 CD302 PALLD

9.97e-051961427M7666
CoexpressionGSE34217_MIR17_92_OVEREXPRESS_VS_WT_ACT_CD8_TCELL_DN

GAS2 NOL10 SH3TC1 ST3GAL5 FCRL5 HDC

1.04e-041371426M8915
CoexpressionGSE13738_TCR_VS_BYSTANDER_ACTIVATED_CD4_TCELL_DN

ITGB7 STK10 OPTN ST3GAL5 TLR1 DNAJC3 SOS1

1.06e-041981427M3325
CoexpressionGSE1791_CTRL_VS_NEUROMEDINU_IN_T_CELL_LINE_12H_UP

TRIB2 SNHG12 HENMT1 TUBGCP3 CD302 CLEC16A PALLD

1.06e-041981427M6168
CoexpressionNOUZOVA_TRETINOIN_AND_H4_ACETYLATION

THOC1 ZGRF1 LARP7 ZNF518A NUP155 DCTN4

1.09e-041381426M15068
CoexpressionGSE42724_B1_BCELL_VS_PLASMABLAST_UP

GAS2 NOXRED1 CCT4 UROC1 TSEN2 LARP7 RIPOR1

1.10e-041991427M9787
CoexpressionGSE3982_EOSINOPHIL_VS_BASOPHIL_DN

RALGAPA1 CLSTN1 CASK OPTN NF1 PALLD VPS13B

1.10e-041991427M5414
CoexpressionGSE10239_KLRG1INT_VS_KLRG1HIGH_EFF_CD8_TCELL_DN

WDR7 KIF16B F2R PLCL2 SLC4A10 ANKRD52 VPS13B

1.10e-041991427M3070
CoexpressionGSE25085_FETAL_LIVER_VS_ADULT_BM_SP4_THYMIC_IMPLANT_DN

CCT4 KIF20B SLC39A8 FANCD2 NUP155 WDHD1 PLK4

1.13e-042001427M8069
CoexpressionGSE43955_TH0_VS_TGFB_IL6_TH17_ACT_CD4_TCELL_4H_UP

PARG CIT CASK WDHD1 GALNT11 TUBGCP3 TANC1

1.13e-042001427M9640
CoexpressionGSE17721_CPG_VS_GARDIQUIMOD_8H_BMDC_DN

CARMIL1 CYP51A1 CASR INTS3 F2R METAP1 TUBGCP3

1.13e-042001427M3893
CoexpressionGSE21033_CTRL_VS_POLYIC_STIM_DC_12H_DN

STBD1 ZNF302 CLSTN1 ZNF518A TUBGCP3 DNAJC3 SOS1

1.13e-042001427M7717
CoexpressionGSE11864_CSF1_IFNG_VS_CSF1_PAM3CYS_IN_MAC_UP

HK1 DHX58 CMTR1 INTS3 CLSTN1 FANCD2 PLCL2

1.13e-042001427M3142
CoexpressionHEVNER_CORTEX_RADIAL_GLIA_PROGENITORS

CAND2 ATR CIT KIF20B CREB5 LARP7 FANCD2 WDHD1 BRCA2 PLOD2

1.28e-0443214210MM419
CoexpressionBAELDE_DIABETIC_NEPHROPATHY_DN

TRIB2 CAND2 KIAA0232 CYP51A1 F2R FRY OPTN PLOD2 CLEC16A PALLD

1.41e-0443714210M4665
CoexpressionRODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP

USP34 ATR SNHG12 NCBP1 ANKHD1 KIF20B CREB5 KRT80 GTPBP2 WDHD1 BRCA2 TUBGCP3 PLK4

1.56e-0472114213M10237
CoexpressionFAN_OVARY_CL11_MURAL_GRANULOSA_CELL

TRIB2 HK1 CCT4 SLC39A8 ACSL4 WWC2 PLA2G12A MACF1 MAP3K13 PLOD2

1.60e-0444414210M41713
CoexpressionFAN_EMBRYONIC_CTX_MICROGLIA_1

CIT KIF20B FANCD2 BRCA2 POLQ PLK4

2.05e-041551426M39041
CoexpressionRIGGINS_TAMOXIFEN_RESISTANCE_DN

KIAA0232 TBC1D9 CASK CD302 EIF2AK2 PALLD VPS13B

2.09e-042211427M15835
CoexpressionGSE34156_UNTREATED_VS_6H_NOD2_AND_TLR1_TLR2_LIGAND_TREATED_MONOCYTE_DN

CMTR1 FCRL1 KIF3B GVINP1 TLR1 EIF2AK2

2.43e-041601426M8664
CoexpressionXIE_ST_HSC_S1PR3_OE_DN

TRIB2 PKLR OSBP2

2.55e-04231423M41756
CoexpressionACEVEDO_LIVER_CANCER_UP

USP34 RPLP1 MRPL44 CYP51A1 HBP1 SLC39A8 LARP7 CASK NTAN1 KRT222 TBCK PLCL2 DCTN4 MICU2 PALLD

2.64e-0497214215M15709
CoexpressionAtlasStem Cells, SC.MEP.BM, Lineage- Kit+ Sca1- CD34- FcgR-/low, Bone marrow, avg-2

TRIB2 SNHG12 ZGRF1 KIF20B FANCD2 OPTN WDHD1 BRCA2 ST3GAL5 PLA2G12A PKLR POLQ PLK4

1.90e-0640113613GSM791108_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

CDKN1A RALGAPA1 ABCF1 APCDD1 KIZ PPFIA1 NCBP1 ANKHD1 CIT KIF20B ZNF518A EIF4E1B ACSL4 NTAN1 BRCA2 DCTN4 POLQ

2.37e-0583113617Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3

ABCF1 APCDD1 PARG NCBP1 CIT KIF20B LARP7 ZNF518A ACSL4 NUP155 BRCA2 POLQ PLK4

3.87e-0553213613Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_1000_k-means-cluster#5

ABCF1 CIT KIF20B ZNF518A ACSL4 BRCA2 POLQ PLK4

5.21e-052041368Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_1000_K5
CoexpressionAtlasdev gonad_e12.5_M_GermCellTestis_Oct_k-means-cluster#2_top-relative-expression-ranked_1000

ZGRF1 SENP3 PARG SIRT1 ZNF518A EFTUD2 FANCD2 WDHD1 PLK4

5.56e-052661369gudmap_dev gonad_e12.5_M_GermCellTestis_Oct_k2_1000
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 RTTN CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

1.36e-081951429cec7df321f372d05c94f97d6bb18891a5cc3dec3
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 RTTN CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

1.36e-081951429b65463a804fed2d9a3be9e528ca8b9c98469bc86
ToppCellCOVID-19-T_cells-Cycling_NK/T_cells|COVID-19 / group, cell type (main and fine annotations)

ZGRF1 CIT KIF20B SLC4A1 FANCD2 WDHD1 BRCA2 POLQ PLK4

1.36e-081951429764ed100c28d9bc93ee5ecabc5291c8f184d78da
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 RTTN CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

1.42e-081961429df366d76ea55f49e349d622effa57c1535df8400
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_myocytic-mes_proliferating_SM_(20)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 RTTN CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

1.81e-071901428e83fa8b711aa79a1767818474f1c193b674b1c31
ToppCellhuman_hepatoblastoma-Tumor_cells-T1|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

ZGRF1 RTTN CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ

2.04e-0719314284b9fa2a4424f8abe63fa7bee78db93dda04ab15f
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 RTTN CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ

2.20e-07195142856d8734d020b3da08a5aa9e67999706a9e023a99
ToppCellCOVID-19-lung-Proliferative_fibroblast|lung / Disease (COVID-19 only), tissue and cell type

COL6A3 ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

2.29e-0719614282ce8a787f2731faa913d20342d73041d59468f27
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_cycling|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

2.29e-0719614281d2e0b328eb822db7521b5f5724d4bd17c0bad5f
ToppCellCOVID-19-lung-Proliferative_fibroblast|COVID-19 / Disease (COVID-19 only), tissue and cell type

COL6A3 ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

2.29e-071961428ca91d5e325875e7444809b80fcbd491d8899ea36
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_cycling|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

2.38e-0719714288b616cde333bdbc0c591035ad9e4949155866245
ToppCellParenchymal-NucSeq-Epithelial-Epi_alveolar-Dividing_AT2|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ZGRF1 CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

2.67e-072001428af3dc76b4507bf4edd265169f5dfbbb8a19eb394
ToppCell3'-GW_trimst-1-LargeIntestine-Hematopoietic-Red_blood_cells-RBC|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HK1 SLC39A8 SLC4A1 EIF4E1B OPTN PKLR OSBP2

1.31e-061711427f21eae4dd2e0a566eff792d19367e96ffb0b74ba
ToppCell3'-GW_trimst-1-LargeIntestine-Hematopoietic-Red_blood_cells|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

HK1 SLC39A8 SLC4A1 EIF4E1B OPTN PKLR OSBP2

1.31e-061711427d428c2859a1efc284610ca241a6dae9f182309cd
ToppCellLPS-IL1RA-Endothelial-Endothelial-FOXM1|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

1.84e-061801427334e2b1f6eb7d4ece20b1c7b02107863f913237f
ToppCellControl-T_cells-Cycling_NK/T_cells|Control / group, cell type (main and fine annotations)

CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

2.21e-0618514279766216b41ee62bbac4caa25cb98ec5627a24075
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

COL6A3 ZGRF1 KIF20B FBXL7 BRCA2 POLQ PLK4

2.37e-061871427e41e39fd3791acf8ae5376cc5061e196d96868ae
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

COL6A3 ZGRF1 KIF20B FBXL7 BRCA2 POLQ PLK4

2.37e-061871427cefa211ef224e803ea9467882e2ca74d0b1492f1
ToppCellControl-Endothelial-Endothelial-FOXM1|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ZGRF1 CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ

2.55e-0618914271e1499b062d9c647c8f38b0c4e0d871d159be5dd
ToppCellpdx-Tumor_cells-T1|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

ZGRF1 CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ

2.64e-061901427d06ee5f89f1cec8db6897fe3b2a890a07cd3697b
ToppCellCOVID-19-kidney-Proliferating_T_cell|COVID-19 / Disease (COVID-19 only), tissue and cell type

ZGRF1 CIT KIF20B SLC4A1 BRCA2 POLQ PLK4

2.73e-061911427bae388e0e9447d576e68465d73d8313ef6925ffa
ToppCellTCGA-Prostate-Primary_Tumor-Prostate_Adenocarcinoma-Acinar_Adenocarcinoma-6|TCGA-Prostate / Sample_Type by Project: Shred V9

RALGAPA1 USP34 ATR ANKRD50 CD302 EIF2AK2 VPS13B

2.92e-061931427abd71b2cf667ef2b1c4d88acd0c1dd19a12ff659
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_myocytic-mes_proliferating_SM_(20)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

2.92e-061931427bbdfda6665941cfa1965418bb91ef9ff43b1326f
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

3.02e-061941427f9070035553bc68106a9e0bdf4b507715a138aba
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_myocytic-mes_proliferating_SM_(20)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.02e-061941427590a9d4f054e6a3685daf752c9354650fcc7d18a
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_cycling|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

3.13e-061951427926eb3fc5d028be936885bea0654a77db3107234
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

3.13e-0619514271a5e814e12fe37287dbfc58189e1958e2c76b5da
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-Proliferating-Cycling_Progenitors|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.

APCDD1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

3.24e-0619614275905f0e3061a6b98b7a33d64c782c3dda2cd51ef
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

3.24e-0619614271964c5003a0cb84539850a7cfe3bbb0e23a61d2d
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_cycling|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

3.24e-06196142773f951f7712e0aa3323676b9a4b7944d21d347c4
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ PLK4

3.35e-06197142784ed777cdba569200a3ef1654d8a12f17fcfb7f1
ToppCellLPS_IL1RA_TNF-Mesenchymal_fibroblastic-Fibroblasts-Diff_MatrixFB|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

COL6A3 RPLP1 SLIT3 MACF1 CD302 ARHGAP20 PALLD

3.46e-0619814270a4b19c3d5e65ecd24fc2ce80ac5276c813282c7
ToppCellCOVID-19_Moderate-T/NK_proliferative|COVID-19_Moderate / disease group, cell group and cell class

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.46e-061981427166c000fb0e19602ffdd8bf2b2f19be2c6df96a6
ToppCellCOVID-19_Moderate-T/NK_proliferative|World / disease group, cell group and cell class

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.46e-061981427bf0131fbca6032e1aab4aa807f8c1d3be689cb7f
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_basal-Dividing_Basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CIT KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

3.46e-061981427f088badb90c6c2d916195f5649eda102119c9ac6
ToppCell(0)_NK_Dividing|World / Lung cell shreds - cell class (v4) and cell subclass (v4)

ZGRF1 KIF20B FANCD2 WDHD1 BRCA2 POLQ PLK4

3.46e-0619814275ebb4965b723302152b42bfaf48bb77a57dd02c5
ToppCellPBMC-Mild-Lymphocyte-T/NK-Other_T-T/NK_proliferative-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.58e-06199142711c3d9fe811a4619347f47d2b0e94066e3085625
ToppCellPBMC-Mild-Lymphocyte-T/NK-Other_T-T/NK_proliferative-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.58e-06199142736c80907b2ec1cbcd1b4e841e6c02a4792591d74
ToppCellPBMC-Mild-Lymphocyte-T/NK-Other_T-T/NK_proliferative|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.58e-061991427bf4c31902ae8358215245a2e11b5a2fe4ca1bc8c
ToppCellCOVID-19_Mild-Lymphoid_T/NK-T/NK_proliferative|COVID-19_Mild / Disease group, lineage and cell class

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.58e-061991427ddea0e5c1cb6a096ab8e09a8c3c37c1bff381d9c
ToppCellPBMC-Mild-Lymphocyte-T/NK-Other_T-T/NK_proliferative|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.58e-0619914277beb0e07a27fea94674f24eb61c381b0de38ed3e
ToppCellTransverse-(2)_B_cell-(24)_B_cell_cycling|Transverse / shred on region, Cell_type, and subtype

CIT CREB5 SIRT1 WDHD1 TUBGCP3 POLQ PLK4

3.70e-062001427e3f9736227151f23f0e331eec0a7a15ce464b517
ToppCellTransverse-B_cell-B_cell_cycling|Transverse / Region, Cell class and subclass

CIT CREB5 SIRT1 WDHD1 TUBGCP3 POLQ PLK4

3.70e-0620014270e270f8019d9f22068ca426d661937262a5cd331
ToppCellBL-critical-LOC-Lymphoid-Treg|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

ZGRF1 CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.70e-06200142704d95a9102248e98eed069840ea6d3d23a243fd5
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_fibroblastic-mes_immature3_(17)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

COL6A3 GAS2 FBXL7 SLIT3 AHSG ARHGAP20

6.93e-0614414261c001a5a3bbe4ecbce8305f8b260e933033550dd
ToppCellLPS-antiTNF-Endothelial-Endothelial-FOXM1|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ZGRF1 CIT KIF20B FANCD2 BRCA2 POLQ

1.40e-0516314265285318c52aa31c9b22dc2ffff078e32e408604d
ToppCellLPS-IL1RA+antiTNF-Endothelial-Endothelial-FOXM1|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

ZGRF1 CIT KIF20B BRCA2 POLQ PLK4

1.72e-051691426e0607af8ae8609d43e26ff2a2cab92650bfcd5b7
ToppCellfacs-Lung-nan-3m-Lymphocytic-B_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CARMIL3 FCRL1 WDHD1 KRT222 TLR1 FCRL5

1.84e-051711426a31c23406cf6d6a17358a8fb41d392a7fb0306e0
ToppCellfacs-Lung-nan-3m-Lymphocytic-B_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CARMIL3 FCRL1 WDHD1 KRT222 TLR1 FCRL5

1.84e-05171142643d8fd9b9546e84a652564fe96b514b34b06262b
ToppCelldroplet-Marrow-nan-24m-Myeloid-basophil|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

WDR7 ITGB7 KRT80 SLC4A1 FANCD2 CD302

1.97e-0517314266d2ceba4f89a228600e2b40aba81bb0eb81578c0
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling-Cycling_Distal_Convoluted_Tubule_Cell_G2M|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ZGRF1 CASR KIF20B BRCA2 POLQ PLK4

2.10e-051751426876cea684faf42ff3eb4623ad6d7a1fb1276ee02
ToppCellwk_15-18-Hematologic-Meg-ery-Primitive_erythrocyte|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

HK1 SLC39A8 SLC4A1 OPTN PKLR OSBP2

2.17e-051761426664a7d15563428d0ae156d97aa88415fd0a0506a
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_prolif|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL6A3 STBD1 MACF1 CD302 ARHGAP20 PALLD

2.38e-051791426948c2a01ec7a626c68281e6e796a9f0527a88591
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_S-high|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ZGRF1 FANCD2 WDHD1 BRCA2 POLQ PLK4

2.38e-05179142688d44b04eb5c079531db663ed98ddb20b60feb9a
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_S-high|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ZGRF1 FANCD2 WDHD1 BRCA2 POLQ PLK4

2.38e-05179142680112c686a8f85ad5e3cda6e3f3d3d51cf688092
ToppCellhuman_hepatoblastoma-Tumor_cells-T6|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

KIZ CARMIL1 FRY FBXL7 ST3GAL5 PLCL2

2.38e-05179142614fc8ccb6b215063d747643f47d780d2b237eb67
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ZGRF1 CASR KIF20B FANCD2 BRCA2 POLQ

2.46e-051801426401df9cddcbca1eb8f0d2687bcacd98e95dc1493
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ZGRF1 KIF20B FANCD2 BRCA2 POLQ PLK4

2.46e-051801426f8a15c13d85c1bbbf86ce49bb6f86c368ddf22df
ToppCellLPS_only|World / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CDKN1A DHX58 NOL10 SLC39A8 ACSL4 VPS13B

2.87e-051851426a72ccb147ca505880e2da8f6a70b9d570464a691
ToppCellLA-01._Fibroblast_I|World / Chamber and Cluster_Paper

COL6A3 APCDD1 CARMIL1 CREB5 FBXL7 ST3GAL5

3.05e-0518714264ea486991f66c29728d127171a07b81404ec0b78
ToppCellCOVID-19-Fibroblasts-Airway_smooth_muscle|COVID-19 / group, cell type (main and fine annotations)

COL6A3 FRY FBXL7 SLIT3 PLOD2 PALLD

3.05e-051871426464a0c3b92b778911b5f9cd73642e09e3472063a
ToppCellControl-Fibroblasts-Alveolar_FB|Control / group, cell type (main and fine annotations)

COL6A3 NHSL2 FBXL7 SLIT3 MACF1 PALLD

3.05e-05187142692d468dde81125d51daf7abd4703741abe1ab91c
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ZGRF1 KIF20B FANCD2 BRCA2 POLQ PLK4

3.05e-0518714269351fa87b69a951af85b10bf91fe9b1cce8c0517
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_1|Adult / Lineage, Cell type, age group and donor

CARMIL1 LAMA5 SLC39A8 WWC2 TANC1 GALNT5

3.05e-05187142677f78aec946bc6bd85c29aee9ca978ce49f853a3
ToppCellfacs-Lung-nan-3m-Endothelial-Capillary_Aerocyte_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRIB2 CARMIL1 CLSTN1 KRT80 FRY SH3TC1

3.23e-05189142609dd2b3d89416192e84abe302a6237b8f3fdcb6e
ToppCellControl-B_intermediate-6|Control / disease group and sub_cluster of B and Plasma cells(res = 0.5)

ITGB7 TBC1D9 OPTN KIF3B ST3GAL5 FCRL5

3.23e-05189142611cb9a16f1de8f60af2073ed7ea6d4f41c02f299
ToppCellPBMC-Severe-Myeloid-Neutrophil-Neutrophil-Neu_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

WRN NCBP1 BRCA2 TBCK POLQ PLK4

3.33e-0519014263f0c7d130f66faea778fe567604edf1b4cdf85b3
ToppCellCD8+_Memory_T_cell-CV-7|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster

WDR7 CYP51A1 NUP155 TBCK MACF1 POLQ

3.43e-0519114269454f642c3621370fa23640b631301346b300950
ToppCellfacs-Lung-24m-Mesenchymal-fibroblast-alveolar_fibroblast|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

COL6A3 STBD1 F2R MACF1 CD302 PALLD

3.43e-05191142680484d39f34703a33b9bac09826b7a526e883cab
ToppCellfacs-Lung-24m-Mesenchymal-fibroblast-alveolar_fibroblast-alveolar_fibroblast_l49|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

COL6A3 STBD1 F2R MACF1 CD302 PALLD

3.43e-0519114265c4e4e9de14edfae072a2a2882220a31bebf51b2
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-AF1|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

COL6A3 NHSL2 FBXL7 SLIT3 MACF1 PALLD

3.43e-0519114266688cee34beee4f151ac17fccbc9c26a9aad72e1
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

COL6A3 NHSL2 FBXL7 SLIT3 MACF1 PALLD

3.53e-05192142699ce9e3c4c50cf64ebb62145f2b5420efa0db309
ToppCellPBMC-Severe-Myeloid-Neutrophil-Neutrophil-Neu_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

WRN NCBP1 BRCA2 TBCK POLQ PLK4

3.53e-051921426c09dcc73ff9c3855a0f3d7bfa0d5c99c09a117f2
ToppCelldroplet-Lung-18m-Hematologic-myeloid-non-classical_monocyte-nonclassical_monocyte_l14|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SNHG12 WDR7 KIF16B WDHD1 TLR1

3.53e-051161425f2bf9599040f43b5ea8724841d7b71c0a859c016
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL6A3 NHSL2 FBXL7 SLIT3 MACF1 PALLD

3.64e-051931426b3ad5ff480d99217f36cc7471e5a96a519ddb409
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_myocytic-mes_proliferating_SM_(20)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

ZGRF1 CIT FANCD2 BRCA2 POLQ PLK4

3.64e-051931426516ea2c12bdc7a5dc676159d627e36f6abe13ef0
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature5_(6)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

COL6A3 CARMIL1 SLIT3 MACF1 TANC1 ARHGAP20

3.74e-051941426b1bb0f846d2865efdd9bc8842b16b9d069785882
ToppCellControl-Lymphocyte-T_NK-T_NK_proliferative|Control / Disease, Lineage and Cell Type

CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

3.74e-051941426844731b7943d1cfca819b7b89e4e62067bfa0230
ToppCellE15.5-Mesenchymal-mesenchymal_fibroblast-mesenchymal_progenitor_cell|E15.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

COL6A3 STBD1 SLIT3 MACF1 ARHGAP20 PALLD

3.74e-051941426f2f7b9aad7588c8020a4850ff9333e1db8eafac7
ToppCellCOVID-19-Fibroblasts-Alveolar_FB|COVID-19 / group, cell type (main and fine annotations)

COL6A3 NHSL2 FBXL7 SLIT3 TANC1 PALLD

3.85e-051951426603050beeb33c331d4b2e3fa46cae3f3e0e4bdc7
ToppCelldroplet-Limb_Muscle-nan-18m-Mesenchymal-chondrocyte-like|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL6A3 RPLP1 GAS2 F2R SLIT3 CD302

3.96e-051961426fcb275746bf51269ed8ba4cf93edb054a45f1ccd
ToppCellLPS_IL1RA_TNF|World / Treatment groups by lineage, cell group, cell type

COL6A3 SLIT3 CD302 GALNT5 ARHGAP20 PLOD2

4.08e-0519714260a6550dce156fc81f15b1e7830d331ca50d87d06
ToppCellCOVID-19-Fibroblasts-Intermediate_pathological_FB|COVID-19 / group, cell type (main and fine annotations)

COL6A3 NHSL2 FBXL7 SLIT3 PLOD2 PALLD

4.08e-051971426f1c8936986123a3151140c374fcd62d6705c530b
ToppCellAT2_cells-IPF_04|World / lung cells shred on cell class, cell subclass, sample id

STBD1 NHSL2 CYP51A1 SLC39A8 ACSL4 ST3GAL5

4.08e-051971426fd7bdfa6bf5966ebc11fdd13915769429540ddbf
ToppCellCOVID-19_Severe-T/NK_proliferative|COVID-19_Severe / Disease condition and Cell class

CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

4.08e-051971426718a84e9a8248080f2d964e7c6a3ba183ece9592
ToppCellCOVID-19-Fibroblasts|COVID-19 / group, cell type (main and fine annotations)

COL6A3 NHSL2 FBXL7 SLIT3 PLOD2 PALLD

4.08e-051971426fb847f2277609c31fffcdf49517243ce0684facf
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Mesenchymal-chondrocyte-like|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GAS2 F2R CD302 ARHGAP20 PLOD2 PALLD

4.08e-051971426cfd4cc5fb8d7a60dd5c0d2a1a7bad7ba38c19d40
ToppCellIPF-Stromal-Myofibroblast|Stromal / Disease state, Lineage and Cell class

COL6A3 FBXL7 MACF1 TANC1 PALLD VPS13B

4.08e-051971426f304d42fc4936fe20996e07c8dccc698a6e5e5ef
ToppCelldistal-Hematologic-Proliferating_Macrophage-1|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

CIT KIF20B FANCD2 BRCA2 POLQ PLK4

4.19e-0519814262b0716e900bce54ad1825d6dcdaf4ebf31f355c4
ToppCellCOVID-19_Severe-T/NK_proliferative|World / disease group, cell group and cell class

CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

4.19e-05198142648045689d0969ff0a14eee7086b8e19b0d6b6065
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Proliferating-cycling_dorsal_progenitors|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

APCDD1 CIT KIF20B FANCD2 BRCA2 PLK4

4.19e-051981426dada1c19a261c8e1090957cd7e37f2a43a9fe14f
ToppCellParenchymal-NucSeq-Epithelial-Epi_airway_basal-Dividing_Basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ZGRF1 RTTN KIF20B WDHD1 BRCA2 POLQ

4.19e-051981426d5e125f0c4f41b47d567568d0838adcca7655f6d
ToppCellproximal-mesenchymal-Alveolar_Fibroblast|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

COL6A3 F2R SLIT3 MACF1 ARHGAP20 PALLD

4.31e-0519914267f4840ae6a888380feca722543e5e52783f3e35d
ToppCellproximal-3-mesenchymal-Alveolar_Fibroblast|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

COL6A3 F2R SLIT3 MACF1 ARHGAP20 PALLD

4.31e-051991426301d02bbb37e6f1d24b6e865bc3fe3e91260eb30
ToppCellPBMC-Severe-Lymphocyte-T/NK-Other_T-T/NK_proliferative|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

4.31e-051991426e98ff036d04fc78dffef156bdc0d644532274067
ToppCellPBMC-Severe-Lymphocyte-T/NK-Other_T|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

4.31e-051991426305a9ade5bbe8e981e7c641c9a5e0c9f8ef60470
ToppCellproximal-mesenchymal-Alveolar_Fibroblast-3|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

COL6A3 F2R SLIT3 MACF1 ARHGAP20 PALLD

4.31e-0519914269a16e519fb0651a7c4d8e05b931df4fb3b0eb3d1
ToppCellLPS_IL1RA-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

COL6A3 SLIT3 MACF1 CD302 ARHGAP20 PALLD

4.31e-051991426a7dd94b172c973a131a6792f8ccd9bfe44d984ac
ToppCellPBMC-Severe-Lymphocyte-T/NK-Other_T-T/NK_proliferative-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

4.31e-0519914267feedb0bf84a3361c8ab5b6674ff64e8ff140c23
ToppCellPBMC-Severe-Lymphocyte-T/NK-Other_T-T/NK_proliferative|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

CIT FANCD2 WDHD1 BRCA2 POLQ PLK4

4.31e-051991426123fbf2122aa221d8cbf3aef9361ba0982c07695
DiseaseIntellectual Disability

RALGAPA1 ZNF142 HK1 RTTN UROC1 TSEN2 LARP7 FRY GTPBP2 NF1 ST3GAL5 SLC4A10 MACF1

1.98e-0744713813C3714756
DiseasePrimary microcephaly

RTTN CIT TUBGCP3 PLK4

3.14e-06221384C0431350
DiseaseProfound Mental Retardation

UROC1 TSEN2 LARP7 FRY NF1 SLC4A10

5.06e-051391386C0020796
DiseaseMental Retardation, Psychosocial

UROC1 TSEN2 LARP7 FRY NF1 SLC4A10

5.06e-051391386C0025363
DiseaseMental deficiency

UROC1 TSEN2 LARP7 FRY NF1 SLC4A10

5.06e-051391386C0917816
Diseaseneuroimaging measurement, brain volume measurement

USP34 ATR ARHGEF11 SLC39A8 NTAN1 FBXL7 NF1 SLC4A10

6.32e-052861388EFO_0004346, EFO_0006930
DiseaseParoxysmal atrial fibrillation

CDKN1A USP34 CAND2 CREB5 SIRT1 SLIT3

9.59e-051561386C0235480
Diseasefamilial atrial fibrillation

CDKN1A USP34 CAND2 CREB5 SIRT1 SLIT3

9.59e-051561386C3468561
DiseasePersistent atrial fibrillation

CDKN1A USP34 CAND2 CREB5 SIRT1 SLIT3

9.59e-051561386C2585653
DiseaseAtrial Fibrillation

CDKN1A USP34 CAND2 CREB5 SIRT1 SLIT3

1.10e-041601386C0004238
Diseasecalcium measurement

CASR HBP1 F2R CREB5 SLC39A8 SLC4A1 METAP1 AHSG MACF1 POLQ SOS1

1.87e-0462813811EFO_0004838
Diseasecongenital nonspherocytic hemolytic anemia (is_implicated_in)

HK1 PKLR

2.15e-0451382DOID:2861 (is_implicated_in)
Diseasecardiovascular disease biomarker measurement

SLC39A8 AHSG

3.22e-0461382EFO_0005278
Diseaseatrial fibrillation

CDKN1A USP34 CAND2 CREB5 SIRT1 SLC39A8 SLIT3 MICU2

3.72e-043711388EFO_0000275
DiseaseSevere Congenital Microcephaly

TSEN2 CASK PLK4

4.09e-04311383C3853041
DiseaseVisual Impairment

HK1 TSEN2

4.49e-0471382C3665347
DiseaseMicrolissencephaly

TSEN2 CASK PLK4

4.93e-04331383C1956147
Diseasewhite matter microstructure measurement

ANKHD1 SLC39A8 EFTUD2 FBXL7 MAP3K13 SSH2 DNAJC3 SOS1

5.17e-043901388EFO_0005674
DiseasePancreatic carcinoma, familial

BRCA2 PALLD

7.65e-0491382C2931038
Diseasered blood cell density measurement

RALGAPA1 TRIB2 HK1 ATR ARHGEF11 KIF20B SLC39A8 WWC2 ST3GAL5 PLCL2 SSH2 VPS13B

9.04e-0488013812EFO_0007978
DiseaseFanconi anemia (is_implicated_in)

FANCD2 BRCA2

9.53e-04101382DOID:13636 (is_implicated_in)
Diseasehigh grade glioma (is_implicated_in)

CDKN1A NF1 BRCA2

1.01e-03421383DOID:3070 (is_implicated_in)
Diseaseaspartate aminotransferase measurement

CDKN1A BTBD8 CARMIL1 KIF16B SLC39A8 METAP1 WWC2 NF1 SH3TC1 CLEC16A EIF2AK2 SOS1

1.14e-0390413812EFO_0004736
DiseaseEnzymopathy

HK1 PKLR

1.16e-03111382C0520572
Diseasesevere acute respiratory syndrome, COVID-19

COL6A3 GAS2 WRN NOL10 CREB5 CASK SLC4A10 EIF2AK2

1.25e-034471388EFO_0000694, MONDO_0100096
DiseaseCongenital pontocerebellar hypoplasia

TSEN2 CASK

1.64e-03131382C0266468
Diseaserenal sinus adipose tissue measurement

FCRL5 ARHGAP20

1.64e-03131382EFO_0004864
DiseaseFEV/FEC ratio

USP34 COL6A3 KIAA0232 TSEN2 WWC2 KIF3B TBCK RIPOR1 SSH2 ARHGAP20 KIF13A CLEC16A SMURF2 HDC

1.89e-03122813814EFO_0004713
DiseaseFanconi anemia

FANCD2 BRCA2

1.90e-03141382cv:C0015625
DiseaseRASopathy

NF1 SOS1

2.19e-03151382cv:C5555857
Diseaseanemia (implicated_via_orthology)

SLC4A1 SLC4A10

2.19e-03151382DOID:2355 (implicated_via_orthology)
Diseasetheta wave measurement

SLC39A8 CLEC16A

2.82e-03171382EFO_0006873
DiseaseAdenocarcinoma of lung (disorder)

HK1 ATR ACSL4 EIF2AK2 SOS1

2.89e-032061385C0152013
DiseaseBone marrow hypocellularity

FANCD2 BRCA2

3.16e-03181382C1855710
DiseaseHypertrophy

CDKN1A SIRT1

3.16e-03181382C0020564
DiseaseLiver Cirrhosis, Experimental

CDKN1A F2R SIRT1 SLC39A8 TBC1D9 STK10 FRY PLA2G12A PKLR PLOD2

3.55e-0377413810C0023893
Diseaselymphocyte count

TRIB2 CARMIL2 KIAA0232 SLC26A4 PPFIA1 UROC1 ARHGEF11 CLSTN1 ITGB7 SLC4A1 ST3GAL5 MCM3AP RIPOR1 SSH2 CLEC16A

3.61e-03146413815EFO_0004587
DiseaseMicrocephaly

TSEN2 CASK PLK4

3.85e-03671383C0025958
Diseaseatherosclerosis (biomarker_via_orthology)

CASR SIRT1

3.90e-03201382DOID:1936 (biomarker_via_orthology)
Diseaseintrinsic cardiomyopathy (implicated_via_orthology)

RPLP1 CCT4

4.30e-03211382DOID:0060036 (implicated_via_orthology)

Protein segments in the cluster

PeptideGeneStartEntry
LAHVLELTAEISCFT

ACSL4

321

O60488
LLIVSHDQGFLDDVC

ABCF1

501

Q8NE71
AEEDHVDLSLSCTLV

CDKN1A

106

P38936
ELLHSLEGFLDCSLV

SLC4A1

306

P02730
LEDEIIFITCHEGSL

CASR

756

P41180
HLEELVLETCSLRGD

CARMIL2

246

Q6F5E8
DEDLVDTCAFLHIKT

CD302

121

Q8IX05
HLLELSDTALSLEDC

GVINP1

1211

Q7Z2Y8
TICSVFEAEIVLLFH

GTPBP2

501

Q9BX10
GFCTDTLLPHLLEDD

ARHGEF11

686

O15085
VSLLIDRGAEVDHCD

ANKRD50

731

Q9ULJ7
ESLVSEEIVHDLDTC

CLSTN1

706

O94985
VDCVHLLLEKGSTAD

ANKRD52

701

Q8NB46
GDHELSLSEVRECLK

DNAJC3

236

Q13217
HITGLDLFTELENCL

FAM200A

181

Q8TCP9
EEFELCLPDGDVSIH

CIT

1491

O14578
IVLHGLDLESEHCIF

KIF16B

491

Q96L93
HEEICLGLFTLILTE

INTS3

86

Q68E01
EVGLFSELDCSLEHE

CREB5

71

Q02930
HLETLLDPVDDCFSE

HDC

541

P19113
ACETTVELLFDSVIH

PLA2G12A

151

Q9BZM1
LDSLEEIHALTDCSE

CASK

351

O14936
ALSLSHCELITDDGI

FBXL2

316

Q9UKC9
LEERVHLECDGETIS

DGKK

911

Q5KSL6
ELVLGLAAEVCDDFL

NOP9

181

Q86U38
AACLAELLDSDELHV

KLHL33

116

A6NCF5
DISSLHGILEELTLC

KRT40

191

Q6A162
QFEHTLLVTDTGCEI

METAP1

356

P53582
ETEDHLESLICKVGE

NCBP1

26

Q09161
LTECHFVELTEDIGP

NMUR2

366

Q9GZQ4
LETLLCLIGESFEEH

EIF4E1B

156

A6NMX2
DVCAHLVDLFLVEEI

MCM3AP

1211

O60318
DSRCHIDLSGIVEEV

KRT80

241

Q6KB66
LVHLDLSGTDCVIDL

CARMIL3

366

Q8ND23
EALTFEGATVTLHCE

FCRL5

481

Q96RD9
EAVEELSESVHGLCI

KIAA0232

436

Q92628
FDLHLAATDEGCLET

KRT222

251

Q8N1A0
FTEVLDHNECLIITG

PARG

771

Q86W56
ATGEVLVFLDSHCEV

GALNT11

236

Q8NCW6
SEKELESEGCVHILD

KIF20B

71

Q96Q89
VATLTGHDDEILDSC

DAW1

296

Q8N136
LERCSLLEEELGATH

PPFIA1

186

Q13136
VLYVDLLEGDTECHA

LARP7

481

Q4G0J3
ADTFLEHLCLLDIDS

PKLR

66

P30613
HEVFLDTIISRCLLD

TUBGCP3

751

Q96CW5
CEGQALLDVTHSELT

LAMA5

1346

O15230
FTSLEPEHDLNDVCL

NOL10

306

Q9BSC4
SVLSEEEQTHCLEIG

KIZ

241

Q2M2Z5
ELACIYSALILHDDE

RPLP1

6

P05386
GEELFDHIVSCISDF

HK1

571

P19367
STAHIDTEDSCGILL

OSBP2

231

Q969R2
DTLEHLVTELSSCGF

MACF1

4276

Q9UPN3
ISSIAADGEFLHELE

NUP155

1131

O75694
LCEFDTVDLSAVDVH

PLOD2

281

O00469
GFSEELIVELHTLCD

ITGB7

461

P26010
ITTCHDVLNETLLEG

F2R

251

P25116
LHTLIIAEAFEDDTG

PALLD

326

Q8WX93
KSEGTCIHRLDEELI

MAP3K13

441

O43283
ILFDSLTGECVHVDF

ATR

2481

Q13535
DLITCIELIEHLDSG

HENMT1

126

Q5T8I9
TVCIHKDETDLLFTD

BRCA2

1346

P51587
LILAELLHVCDTAFE

EIF2AK2

476

P19525
DCFVLEDEGLHTIAA

FBXL7

281

Q9UJT9
ELFEIEIDTLETTCH

AHSG

76

P02765
VEDVLELHCEALRGS

FCRL1

221

Q96LA6
GDVLTFLDSHVECNV

GALNT5

581

Q7Z7M9
ECLIIAHSVGVESLF

BTBD8

321

Q5XKL5
NHVSDLGLVLCDFED

POLQ

1306

O75417
GRDLTDFLENVLTCH

COL6A3

2571

P12111
FEALSELIILTASHC

CYP51A1

201

Q16850
ESESKDHFLIACDLL

CCDC30

61

Q5VVM6
ELTVFSLIVVDECHH

DHX58

121

Q96C10
LVEELFLGDIHTDAT

APCDD1

226

Q8J025
TVEDGLLTVECKLDH

HBP1

286

O60381
EDVSEVLAHIGTCLR

CARMIL1

101

Q5VZK9
VHILGCEVSEEEFRE

ELP5

56

Q8TE02
VIFSSCGDLDLLEHQ

FRY

2416

Q5TBA9
CGDLDLLEHQTSLVS

FRY

2421

Q5TBA9
CSTDLFVELADHLLD

CAND2

206

O75155
LTHVTLFECEEGDPD

DCTN4

336

Q9UJW0
EELLCSAEATLALHT

CNST

361

Q6PJW8
DETEFCGEELLHSVL

CMTR1

186

Q8N1G2
RELDIEVFSILHCGL

FANCD2

926

Q9BXW9
LFESCHETSECLELA

MDFIC2

166

A0A1B0GVS7
FEHEELTVSQLLLCL

OPTN

226

Q96CV9
LLSELFLSVHFEDCG

NOXRED1

261

Q6NXP6
HCEIDIASDGDVTLT

KIF13A

491

Q9H1H9
DETCLFESEGLVLHK

GAS2

126

O43903
SGVEVHLDCESIFVI

ARHGAP20

416

Q9P2F6
SLIFHEDCSVVTEVG

RTTN

931

Q86VV8
SVIIELVDDHFEGSL

TSEN2

381

Q8NCE0
LVDFLTGEEVVCHVA

MRPL44

156

Q9H9J2
TEEVSLFLELCFKIH

SNHG12

16

Q9BXW3
DGLETEKCLHVVTEA

SCYL1

81

Q96KG9
ADLCGHSLALLEDLE

NHSL2

41

Q5HYW2
FSEIDVDNLGHITLC

PLCL2

276

Q9UPR0
DLEILHYVVDGIDCL

PRAMEF22

76

A3QJZ6
LDGDECLSHEEFLGV

MICU2

376

Q8IYU8
LELQVHLGDEGEFTC

SIGLEC7

306

Q9Y286
VTAALELCEEVHLFG

ST8SIA5

306

O15466
HLHFDVELLGDCDVI

SIRT1

471

Q96EB6
VVLATHLCDEVSLAG

ST3GAL5

346

Q9UNP4
GLDDTLHTIIDYACE

SECISBP2

706

Q96T21
VAACEGHLSTVEFLL

TANC1

1151

Q9C0D5
LVIEEAERSIHDALC

CCT4

396

P50991
DHICSTEAEGELLQL

SH3TC1

636

Q8TE82
GITLIAVDEAHCISE

WRN

661

Q14191
ILGSDDATTCHIVVL

NTAN1

66

Q96AB6
HRICLALESIISEEE

PLK4

776

O00444
HPLVGSCFEDLAEEL

SOS1

276

Q07889
TDTVFENCGHLTELE

TLR1

361

Q15399
VNEHTEEGESLLCLA

ANKHD1

231

Q8IWZ3
FIGSHVIELDDCVQT

CLEC16A

226

Q2KHT3
CTDGSSFVEEVERHL

SLIT3

1501

O75094
ILENDITGVLDHTFC

SMURF2

536

Q9HAU4
DICDSHFVKLLFETE

TGDS

76

O95455
EEHVTCVQSILDEFL

SENP3

311

Q9H4L4
EDCELSSHFADISLI

WWC2

586

Q6AWC2
SSLCSIDEEHLTDIE

RALGAPA1

381

Q6GYQ0
TDVQFIAVTGDHECL

STBD1

276

O95210
EGCLTTHSSIADLEE

SSH2

826

Q76I76
HSLVLDCGAISFLDV

SLC26A4

656

O43511
VHELDTTGECLVDLG

UROC1

326

Q96N76
HAIFVITIECSEVGL

KIF3B

216

O15066
LHSGEELVCKVFDIS

TRIB2

81

Q92519
DLSHEAILLACESTD

WDHD1

491

O75717
LQGSSEHTEIICDLI

nan

111

Q6ZSR6
EHIPHDLFTELDEIC

SLC4A10

111

Q6U841
EDYIVEIEILATCDH

STK10

76

O94804
DKLHCEDIGEDTVLV

TBC1D9

1176

Q6ZT07
VAFCTHDLESLVGIT

TMEM104

411

Q8NE00
HLTLEFLEECISGFS

NF1

1921

P21359
CTLLHKSERAEEEGV

ZNF518A

96

Q6AHZ1
EDLIDLCELTVTGHF

TBCK

766

Q8TEA7
GQEHEGCLLLTSEVL

VPS13B

3881

Q7Z7G8
CEEIEGEHLPFLTSV

ZGRF1

581

Q86YA3
TSIAILCEEFPHELG

SLC39A8

336

Q9C0K1
EVLCLHLIESGNLTD

TTC37

241

Q6PGP7
AEVEEGSCTLHLEAL

ZNF142

686

P52746
GSCTLHLEALGVELE

ZNF142

691

P52746
AVDDSESLRCEELHL

USP34

1371

Q70CQ2
TACHVTGDLVELLSI

USP34

2986

Q70CQ2
EHVILGTGELYLDCV

EFTUD2

626

Q15029
CLLESELEAQLGEFH

RIPOR1

196

Q6ZS17
EHDLVDDDITTGCLS

WDR7

1091

Q9Y4E6
RGILEEEIINHSSCE

THOC1

56

Q96FV9
ALFEHCSEVTEIFEL

ZNF302

91

Q9NR11