Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionmyosin heavy chain binding

MYL12A MYL9 MYL12B

5.75e-0517903GO:0032036
GeneOntologyBiologicalProcessregulation of RNA splicing

SRSF10 SFSWAP BRDT RRP1B ZNF638 PQBP1 SRSF12

3.18e-05207897GO:0043484
GeneOntologyBiologicalProcessRNA splicing

SRSF10 SFSWAP BRDT RRP1B GPATCH1 ZNF638 TSEN54 SRRM2 PQBP1 SRSF12

6.07e-055028910GO:0008380
GeneOntologyBiologicalProcessbiological phase

TGFB2 SPO11 TTK DEK

8.07e-0553894GO:0044848
GeneOntologyCellularComponentchromatin

PPP1R10 MSH6 WAPL BBX CENPC BRDT RRP1B BAZ2B YY2 H1-6 PKNOX1 ANKRD17 ICE1 SIM2 DEK ANAPC7 ZEB2 CIC AFF4

5.92e-0614808519GO:0000785
GeneOntologyCellularComponentmyosin II complex

MYL12A MYL9 MYL12B

1.97e-0428853GO:0016460
HumanPhenoCupped ear

DNAJC21 PQBP1 ZEB2 MED12 AFF4

1.70e-0569255HP:0000378
Domain-

TCEA3 PPP1R10 HDGFL2

2.70e-05138731.20.930.10
DomainTFIIS_N

TCEA3 PPP1R10 HDGFL2

3.42e-0514873IPR017923
DomainEF_hand_DJBP

MYL12A MYL12B

6.42e-053872IPR015070
DomainEF-hand_11

MYL12A MYL12B

6.42e-053872PF08976
DomainPWWP

MSH6 HDGFL2 HDGFL3

1.05e-0420873SM00293
DomainPWWP

MSH6 HDGFL2 HDGFL3

1.62e-0423873PF00855
DomainPWWP_dom

MSH6 HDGFL2 HDGFL3

1.62e-0423873IPR000313
DomainPWWP

MSH6 HDGFL2 HDGFL3

1.84e-0424873PS50812
DomainTFS2M

TCEA3 PHF3

4.44e-047872SM00510
DomainTFIIS_M

TCEA3 PHF3

4.44e-047872PF07500
DomainTFIIS_cen_dom

TCEA3 PHF3

5.90e-048872IPR003618
Domain-

TCEA3 PHF3

5.90e-0488721.10.472.30
DomainTFIIS_CENTRAL

TCEA3 PHF3

5.90e-048872PS51321
DomainTFIIS/CRSP70_N_sub

TCEA3 PPP1R10

9.42e-0410872IPR003617
DomainTFS2N

TCEA3 PPP1R10

9.42e-0410872SM00509
DomainEF-hand_6

MYL9 MYL12B

1.62e-0313872PF13405
DomainTFIIS_N

TCEA3 PPP1R10

1.62e-0313872PS51319
DomainMed26

TCEA3 PPP1R10

1.62e-0313872PF08711
DomainZnf_C2H2_jaz

ZNF638 DNAJC21

4.66e-0322872IPR022755
Domainzf-C2H2_jaz

ZNF638 DNAJC21

4.66e-0322872PF12171
DomainSAP

DEK MRTFA

4.66e-0322872PF02037
DomainSAP

DEK MRTFA

5.09e-0323872SM00513
DomainPHD

PHF2 BAZ2B PHF3

5.18e-0375873PF00628
DomainZnf_PHD-finger

PHF2 BAZ2B PHF3

5.98e-0379873IPR019787
DomainSAP

DEK MRTFA

6.00e-0325872PS50800
DomainSAP_dom

DEK MRTFA

6.00e-0325872IPR003034
DomainBromodomain_CS

BRDT BAZ2B

6.48e-0326872IPR018359
DomainZnF_U1

ZNF638 DNAJC21

8.03e-0329872SM00451
DomainZnf_U1

ZNF638 DNAJC21

8.03e-0329872IPR003604
DomainPHD

PHF2 BAZ2B PHF3

8.31e-0389873SM00249
DomainZnf_PHD

PHF2 BAZ2B PHF3

8.83e-0391873IPR001965
PathwayKEGG_MEDICUS_PATHOGEN_SALMONELLA_SOPB_TO_RHOA_SIGNALING_PATHWAY

MYL12A MYL9 MYL12B

6.26e-0610543M47739
PathwayKEGG_MEDICUS_PATHOGEN_SHIGELLA_IPAA_TO_ITGA_B_RHOGEF_RHOA_SIGNALING_PATHWAY

MYL12A MYL9 MYL12B

8.58e-0611543M47721
PathwayREACTOME_RHO_GTPASES_ACTIVATE_PAKS

MYL12A MYL9 MYL12B

8.91e-0523543MM15222
PathwayREACTOME_SMOOTH_MUSCLE_CONTRACTION

MYL12A MYL9 MYL12B

3.19e-0435543MM15114
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

MYL12A PHF2 PPP1R10 LIG3 SRSF10 WAPL BBX SFSWAP CENPC RRP1B BAZ2B PHF3 GPATCH1 YY2 ZNF638 RRP15 BOD1L1 ICE1 SRFBP1 SRRM2 PQBP1 MYL12B DEK HDGFL2 CIC AFF4 HDGFL3 SRSF12

5.47e-22954912836373674
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

PHF2 PPP1R10 MSH6 LIG3 WAPL BBX CENPC RRP1B BAZ2B PHF3 RRP15 BOD1L1 DEK ANAPC7 HDGFL2 ZEB2 CIC AFF4 PRDM2 HDGFL3

1.08e-16608912036089195
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

PHF2 CASP8AP2 PPP1R10 LIG3 SRSF10 BBX SFSWAP RRP1B TCOF1 BAZ2B PHF3 MACO1 GPATCH1 H1-6 ZNF638 RRP15 ISG20L2 SRFBP1 POLR1G SRRM2 PQBP1 DEK ANAPC7 HDGFL2 CIC PRDM2

2.14e-161294912630804502
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

MYL12A PHF2 PPP1R10 MSH6 ZNF800 SRSF10 BBX SFSWAP RRP1B PHF3 MACO1 APC DNAJC21 ANKRD17 RRP15 ISG20L2 ICE1 SRFBP1 POLR1G PQBP1 ANAPC7 HDGFL2 CIC MED12 SDAD1 AFF4

6.70e-151497912631527615
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

PPP1R10 MSH6 LIG3 WAPL BBX RRP1B PHF3 GPATCH1 ZNF638 RRP15 BOD1L1 SRFBP1 HDGFL2 AFF4

2.47e-14283911430585729
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

MYL12A PPP1R10 MSH6 SRSF10 WAPL SFSWAP CENPC RRP1B TCOF1 PHF3 ZNF638 RRP15 BOD1L1 ISG20L2 SRFBP1 POLR1G SRRM2 DEK SDAD1 AFF4

9.61e-13989912036424410
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

MYL12A PHF2 PPP1R10 MSH6 LIG3 SRSF10 BBX SFSWAP RRP1B TCOF1 APC ZNF638 PPIP5K2 SRRM2 DEK MED12 SDAD1 AFF4

3.60e-101082911838697112
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

TGFB2 MYL12A MSH6 TCOF1 PHF3 RRP15 BOD1L1 SRRM2 WASHC2A TTK HDGFL2 CIC MRTFA

7.67e-10506911330890647
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

TET2 CASP8AP2 FAM193A ZNF608 APC ANKRD17 ICE1 ZEB2 CIC MED12 PRDM2 MRTFA

1.04e-09418911234709266
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

MSH6 SRSF10 WAPL SFSWAP TCOF1 PHF3 ZNF638 ANKRD17 RRP15 POLR1G SRRM2 CIC PRDM2 MRTFA SMTN

1.63e-09774911515302935
Pubmed

A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.

PHF3 DNAJC21 ISG20L2 SRRM2 PQBP1 WASHC2A HDGFL2 CIC MED12 SDAD1 MRTFA SMTN

4.07e-09472911238943005
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

PPP1R10 CENPC RRP1B TCOF1 ZNF638 HDGFL2 SDAD1 AFF4

5.60e-0914891832538781
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

PHF2 MSH6 LIG3 ZNF800 BBX CENPC BRDT RRP1B SRRM2 DEK ANAPC7 HDGFL3

1.56e-08533911230554943
Pubmed

Diphosphorylated MRLC is required for organization of stress fibers in interphase cells and the contractile ring in dividing cells.

MYL12A MYL9 MYL12B

1.73e-08391311942626
Pubmed

Human transcription factor protein interaction networks.

MYL12A PHF2 TET2 LIG3 BBX ZNF608 RRP1B YY2 ZNF638 PPP1R13B ANKRD17 RRP15 SRRM2 WASHC2A ZEB2 CIC SDAD1 PRDM2

2.74e-081429911835140242
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

MYL12A SRSF10 WAPL SFSWAP RRP1B TCOF1 PHF3 ZNF638 ANKRD17 RRP15 POLR1G SRRM2 DEK SDAD1

4.37e-08847911435850772
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

TET2 HAUS8 SRSF10 ARHGEF28 SASH1 PHF3 APC ANKRD17 BOD1L1 PPIP5K2 SRRM2 TTK CIC MAP3K2

5.35e-08861911436931259
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

CASP8AP2 PPP1R10 MSH6 LIG3 WAPL CENPC PHF3 TOMM34 BOD1L1 POLR1G PQBP1 DEK ANAPC7 HDGFL2 MED12

5.86e-081014911532416067
Pubmed

An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.

HAUS8 WAPL FAM193A PHF3 MACO1 APC ZNF638 TOMM34 ARHGEF18 BOD1L1 ICE1 PPIP5K2 WASHC2A

6.18e-08733911334672954
Pubmed

Mouse myosin-19 is a plus-end-directed, high-duty ratio molecular motor.

MYL12A MYL9 MYL12B

6.92e-08491324825904
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

MYL12A PHF2 TCEA3 PPP1R10 SRSF10 SFSWAP RRP1B TCOF1 PHF3 ANKRD17 RRP15 ISG20L2 SRFBP1 PQBP1 DEK SDAD1 AFF4

8.83e-081371911736244648
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

PHF2 PPP1R10 MSH6 CENPC RRP1B MACO1 MOB1A ZNF638 PPP1R13B SRFBP1 SRRM2 PQBP1 DEK CIC SDAD1

9.09e-081049911527880917
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

TGFB2 LIG3 SRSF10 ZNF608 RRP1B TCOF1 PHF3 APC DNAJC21 ANKRD17 RRP15 SIM2 SRRM2 MYL12B MED12 AFF4

1.41e-071247911627684187
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

PPP1R10 MSH6 LIG3 WAPL FAM193A TCOF1 GPATCH1 ZNF638 ANKRD17 BOD1L1 ICE1 HDGFL2 CIC AFF4

1.45e-07934911433916271
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

PPP1R10 LIG3 WAPL TCOF1 GPATCH1 ZNF638 SRRM2 MED12 AFF4

2.92e-0734191932971831
Pubmed

Targeted proteomic analysis of 14-3-3 sigma, a p53 effector commonly silenced in cancer.

SRSF10 SASH1 APC ZNF638 SRRM2 MAP3K2

2.99e-0710291615778465
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

MYL12A PPP1R10 SFSWAP ZNF638 BOD1L1 ANAPC7 HDGFL2 SRSF12

3.34e-0725191831076518
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

MYL12A MSH6 SRSF10 BBX SFSWAP RRP1B ZNF638 RRP15 SRRM2 DEK SDAD1 SRSF12

3.62e-07713911229802200
Pubmed

Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression.

PHF2 BBX SFSWAP POLR1G HDGFL2

3.77e-075691526919559
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

PPP1R10 HAUS8 FAM193A PHF3 APC DNAJC21 ANKRD17 PQBP1 WASHC2A MYL12B TTK ANAPC7

4.25e-07724911236232890
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

SRSF10 SFSWAP RRP1B TCOF1 RRP15 ISG20L2 SRFBP1 POLR1G SRRM2 PQBP1 DEK SRSF12

4.71e-07731911229298432
Pubmed

Myosin regulatory light chains are required to maintain the stability of myosin II and cellular integrity.

MYL12A MYL9 MYL12B

6.02e-07791321126233
Pubmed

Chamber specification of atrial myosin light chain-2 expression precedes septation during murine cardiogenesis.

MYL12A MYL9 MYL12B

6.02e-0779138207020
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

PPP1R10 MSH6 RRP1B TCOF1 PHF3 APC ZNF638 POLR1G SRRM2 MRTFA

8.26e-07503911016964243
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

SRSF10 WAPL GRAMD2B APC ZNF638 ANKRD17 ARHGEF18 BOD1L1 ANKRD12 WASHC2A AFF4 PRDM2 MRTFA SMTN

8.61e-071084911411544199
Pubmed

Distinct Roles of Smooth Muscle and Non-muscle Myosin Light Chain-Mediated Smooth Muscle Contraction.

MYL12A MYL9 MYL12B

9.61e-07891333424621
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

TET2 MSH6 ZNF800 FAM193A BBX RRP1B TCOF1 ANKRD17 RRP15 SRRM2 MAP3K2

1.18e-06655911135819319
Pubmed

The protein interaction landscape of the human CMGC kinase group.

SRSF10 RRP1B TCOF1 PHF3 APC RRP15 ICE1 SRRM2 MED12 AFF4 SRSF12

2.08e-06695911123602568
Pubmed

The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets.

MYL12A HAUS8 MYL9 DNAJC21 ISG20L2 MYL12B ANAPC7

2.21e-0622591725277244
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

MSH6 WAPL RRP1B TCOF1 PHF3 GPATCH1 APC ANKRD17 SDAD1

2.40e-0644091934244565
Pubmed

Regulation of cardiac mesodermal and neural crest development by the bHLH transcription factor, dHAND.

MYL12A MYL9 MYL12B

2.82e-06119139171826
Pubmed

Human Immunodeficiency Virus Type 1 Vpr Mediates Degradation of APC1, a Scaffolding Component of the Anaphase-Promoting Complex/Cyclosome.

GPATCH1 APC ANKRD17 WASHC2A TTK CIC MED12

3.57e-0624291734011540
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

PPP1R10 HAUS8 LIG3 ZNF638 BOD1L1 PQBP1 DEK HDGFL2 ZEB2

4.03e-0646991927634302
Pubmed

FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.

PHF2 RRP15 ISG20L2 POLR1G DEK SDAD1 SRSF12

4.19e-0624891727926873
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

MYL12A PHF2 MSH6 LIG3 SRSF10 WAPL RRP1B TCOF1 RRP15 BOD1L1 SRRM2 DEK ANAPC7 SDAD1 PRDM2

4.20e-061425911530948266
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

MSH6 LIG3 SFSWAP RRP1B TCOF1 ZNF638 SRRM2 DEK HDGFL2 SDAD1

4.28e-06605911028977666
Pubmed

A bead-based approach for large-scale identification of in vitro kinase substrates.

MSH6 SRSF10 RRP1B SRRM2 DEK HDGFL2

4.63e-0616391622113938
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

MSH6 LIG3 RRP1B PHF3 DNAJC21 RRP15 ISG20L2 POLR1G DEK MED12 SDAD1

4.83e-06759911135915203
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

SRSF10 BBX ZNF608 CENPC H1-6 DNAJC21 RRP15 BOD1L1 ISG20L2 IFT122 PPIP5K2 ANAPC7 HDGFL2 CXorf65 ZEB2

4.85e-061442911535575683
Pubmed

A rational nomenclature for serine/arginine-rich protein splicing factors (SR proteins).

SRSF10 SFSWAP SRSF12

4.86e-061391320516191
Pubmed

Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.

PPP1R10 SRSF10 RRP1B APC ZNF638 RRP15 SRRM2 PQBP1

5.01e-0636191830344098
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

PHF2 TET2 MSH6 BAZ2B TOMM34 SRRM2 PQBP1 DEK ANAPC7 ZEB2 CIC MED12 PRDM2

5.94e-061103911334189442
Pubmed

SIM2 maintains innate host defense of the small intestine.

APC SIM2

6.77e-06291225277798
Pubmed

A Mediator-cohesin axis controls heterochromatin domain formation.

WAPL MED12

6.77e-06291235136067
Pubmed

Serine-arginine (SR) protein-like factors that antagonize authentic SR proteins and regulate alternative splicing.

SRSF10 SRSF12

6.77e-06291211684676
Pubmed

Identification of phosphorylated MYL12B as a potential plasma biomarker for septic acute kidney injury using a quantitative proteomic approach.

MYL12A MYL12B

6.77e-06291226823757
Pubmed

Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.

TET2 WAPL ZNF608 PHF3 CIC MED12 AFF4

6.95e-0626891733640491
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

CASP8AP2 FAM193A CENPC RRP1B TCOF1 MACO1 DNAJC21 TOMM34 RRP15 IFT122 SRRM2 WASHC2A TTK DEK HDGFL2

7.01e-061487911533957083
Pubmed

Fgf and Esrrb integrate epigenetic and transcriptional networks that regulate self-renewal of trophoblast stem cells.

MSH6 LIG3 PHF3 ICE1 PRDM2 SMTN

7.43e-0617791626206133
Pubmed

Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.

PHF2 TCEA3 PPP1R10 MSH6 BBX BRDT ZNF638 PKNOX1 DEK CIC MRTFA

8.70e-06808911120412781
Pubmed

Targeting TRIM37-driven centrosome dysfunction in 17q23-amplified breast cancer.

PPP1R10 FAM193A ARHGEF18 ANKRD12 ZEB2 SMTN

9.28e-0618491632908313
Pubmed

The HECT type ubiquitin ligase NEDL2 is degraded by anaphase-promoting complex/cyclosome (APC/C)-Cdh1, and its tight regulation maintains the metaphase to anaphase transition.

SRSF10 PHF3 MOB1A ZNF638 TOMM34 MED12 AFF4

9.46e-0628191724163370
Pubmed

GATA4 transcription factor is required for ventral morphogenesis and heart tube formation.

MYL12A MYL9 MYL12B

9.47e-06169139136932
Pubmed

Intact lipid rafts regulate HIV-1 Tat protein-induced activation of the Rho signaling and upregulation of P-glycoprotein in brain endothelial cells.

MYL12A MYL9 MYL12B

9.47e-061691319794400
Pubmed

TWIST1 and chromatin regulatory proteins interact to guide neural crest cell differentiation.

PHF2 BBX RRP1B DEK ZEB2

1.03e-0510991533554859
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

TET2 CASP8AP2 WAPL SASH1 ZNF608 RRP1B ANKRD17 ICE1 PPIP5K2

1.06e-0552991914621295
Pubmed

The cell proliferation antigen Ki-67 organises heterochromatin.

HEATR6 BBX TCOF1 ARHGEF18 RRP15 ISG20L2 MED12 SDAD1

1.26e-0541091826949251
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

LIG3 WAPL BBX MYL9 ANKRD17 SIM2 MYL12B DEK ANAPC7 ZEB2 CIC

1.50e-05857911125609649
Pubmed

Oct4 links multiple epigenetic pathways to the pluripotency network.

PPP1R10 MSH6 WAPL TCOF1 PHF3 ANKRD17

1.62e-0520391622083510
Pubmed

The interactome of CLUH reveals its association to SPAG5 and its co-translational proximity to mitochondrial proteins.

LIG3 SRSF10 TCOF1 ANKRD17 PQBP1 HDGFL2

1.62e-0520391635012549
Pubmed

Degree and site of chromosomal instability define its oncogenic potential.

APC TTK

2.03e-05391232198375
Pubmed

Myocardin-related transcription factor A is up-regulated by 17β-estradiol and promotes migration of MCF-7 breast cancer cells via transactivation of MYL9 and CYR61.

MYL9 MRTFA

2.03e-05391224084383
Pubmed

Alkylation-induced colon tumorigenesis in mice deficient in the Mgmt and Msh6 proteins.

MSH6 APC

2.03e-05391219029948
Pubmed

AATF/Che-1 acts as a phosphorylation-dependent molecular modulator to repress p53-driven apoptosis.

MYL12A MYL12B

2.03e-05391222909821
Pubmed

Identification of an evolutionarily conserved domain in human lens epithelium-derived growth factor/transcriptional co-activator p75 (LEDGF/p75) that binds HIV-1 integrase.

HDGFL2 HDGFL3

2.03e-05391215371438
Pubmed

Mass-spectrometry-based proteomic correlates of grade and stage reveal pathways and kinases associated with aggressive human cancers.

TTK MAP3K2

2.03e-05391233627787
Pubmed

Histone methyltransferase SMYD3 promotes MRTF-A-mediated transactivation of MYL9 and migration of MCF-7 breast cancer cells.

MYL9 MRTFA

2.03e-05391224189459
Pubmed

The distinct spectra of tumor-associated Apc mutations in mismatch repair-deficient Apc1638N mice define the roles of MSH3 and MSH6 in DNA repair and intestinal tumorigenesis.

MSH6 APC

2.03e-05391211691815
Pubmed

Association of tissue promoter methylation levels of APC, TGFβ2, HOXD3 and RASSF1A with prostate cancer progression.

TGFB2 APC

2.03e-05391221207416
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

CASP8AP2 TCOF1 MACO1 APC PPP1R13B PQBP1 WASHC2A TTK CIC

2.43e-0558891938580884
Pubmed

Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity.

MYL9 RRP1B MOB1A MYL12B TTK DEK ANAPC7 HDGFL2 SDAD1 AFF4 MAP3K2

2.61e-05910911136736316
Pubmed

HSF1 phosphorylation establishes an active chromatin state via the TRRAP-TIP60 complex and promotes tumorigenesis.

CASP8AP2 LIG3 WAPL MYL9 TCOF1 IRAG2 ZNF638 ANAPC7 MRTFA MAP3K19

2.86e-05754911035906200
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

PHF2 MSH6 WAPL SFSWAP ZNF608 BRDT TCOF1 ANKRD17 POLR1G SRRM2 ANAPC7 AFF4

3.44e-051116911231753913
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

PPP1R10 SRSF10 RRP1B TCOF1 ZNF638 DNAJC21 ANKRD17 SRRM2 SDAD1

3.45e-0561591931048545
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

PHF2 MSH6 SRSF10 WAPL RRP1B TCOF1 H1-6 RRP15 PPIP5K2 POLR1G SRRM2 TTK DEK

3.86e-051318911330463901
Pubmed

The acute myeloid leukemia-associated protein, DEK, forms a splicing-dependent interaction with exon-product complexes.

SRRM2 DEK

4.05e-05491210908574
Pubmed

Interaction between CASP8AP2 and ZEB2-CtBP2 Regulates the Expression of LEF1.

CASP8AP2 ZEB2

4.05e-05491235139734
Pubmed

TGF-β-induced mesenchymal transition of MS-1 endothelial cells requires Smad-dependent cooperative activation of Rho signals and MRTF-A.

TGFB2 MRTFA

4.05e-05491221984612
Pubmed

DNA repair and cell cycle control genes and the risk of young-onset lung cancer.

MSH6 LIG3

4.05e-05491217108146
Pubmed

Oxidative Stress Enhances the TGF-β2-RhoA-MRTF-A/B Axis in Cells Entering Endothelial-Mesenchymal Transition.

TGFB2 MRTFA

4.05e-05491235216178
Pubmed

MAL/SRF complex is involved in platelet formation and megakaryocyte migration by regulating MYL9 (MLC2) and MMP9.

MYL9 MRTFA

4.05e-05491219724058
Pubmed

Common variants in human CRC genes as low-risk alleles.

MSH6 APC

4.05e-05491220149637
Pubmed

The MicroRNA 29 Family Promotes Type II Cell Differentiation in Developing Lung.

TGFB2 ZEB2

4.05e-05491227215389
Pubmed

Allelic effects of mouse Pas1 candidate genes in human lung cancer cell lines.

IRAG2 LMNTD1

4.05e-05491216458428
Pubmed

N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.

LIG3 TCOF1 APC ZNF638 PPIP5K2 SRRM2 MAP3K2

4.61e-0536091733111431
Pubmed

Phosphoproteomic analysis of the developing mouse brain.

WAPL TCOF1 PHF3 POLR1G SRRM2 CIC

4.75e-0524691615345747
Pubmed

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.

PHF2 PPP1R10 HAUS8 LIG3 BBX ZNF608 CENPC ZNF638 MED12

4.98e-0564591925281560
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

PPP1R10 SRSF10 HEATR6 RRP1B TCOF1 ZNF638 SRFBP1 SRRM2 DEK SRSF12

5.06e-05807911022681889
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

LIG3 WAPL ARHGEF28 APC ZNF638 DNAJC21 ANKRD17 IFT122 PPIP5K2

5.28e-0565091938777146
Pubmed

Human Antiviral Protein IFIX Suppresses Viral Gene Expression during Herpes Simplex Virus 1 (HSV-1) Infection and Is Counteracted by Virus-induced Proteasomal Degradation.

SRSF10 TCOF1 PHF3 ANKRD17 HDGFL2 SDAD1

5.31e-0525191628077445
InteractionSMC5 interactions

MYL12A PHF2 PPP1R10 LIG3 SRSF10 WAPL BBX SFSWAP CENPC RRP1B BAZ2B PHF3 GPATCH1 YY2 ZNF638 RRP15 BOD1L1 ICE1 SRFBP1 SRRM2 PQBP1 MYL12B DEK HDGFL2 CIC AFF4 HDGFL3 SRSF12

2.31e-1510009128int:SMC5
InteractionPOLR1G interactions

PHF2 LIG3 BBX CENPC RRP1B TCOF1 BAZ2B PHF3 RRP15 ISG20L2 ICE1 SRFBP1 POLR1G SRRM2 ZEB2 CIC SDAD1 AFF4 PRDM2

5.28e-134899119int:POLR1G
InteractionNUP43 interactions

PHF2 CASP8AP2 LIG3 SRSF10 BBX ZNF608 CENPC RRP1B BAZ2B GPATCH1 APC RRP15 BOD1L1 ICE1 SRRM2 PQBP1 MED12 SDAD1 PRDM2 SMTN

4.19e-126259120int:NUP43
InteractionH3C3 interactions

PHF2 MSH6 LIG3 WAPL BBX CENPC RRP1B BAZ2B PHF3 RRP15 BOD1L1 DEK ANAPC7 HDGFL2 ZEB2 CIC AFF4 PRDM2

7.04e-124959118int:H3C3
InteractionDDX23 interactions

PHF2 MSH6 LIG3 SRSF10 SFSWAP CENPC BRDT RRP1B TCOF1 PHF3 ZNF638 RRP15 SRFBP1 SRRM2 HDGFL2 SDAD1 AFF4

4.38e-114809117int:DDX23
InteractionH3-3A interactions

PHF2 PPP1R10 MSH6 LIG3 WAPL BBX CENPC RRP1B PHF3 H1-6 RRP15 BOD1L1 DEK ANAPC7 HDGFL2 ZEB2 CIC AFF4 PRDM2 HDGFL3

1.07e-107499120int:H3-3A
InteractionTERF2IP interactions

PPP1R10 LIG3 WAPL BBX SFSWAP ZNF608 CENPC PHF3 ZNF638 BOD1L1 SRRM2 PQBP1 CIC AFF4 HDGFL3

2.45e-085529115int:TERF2IP
InteractionXRCC6 interactions

PHF2 PPP1R10 MSH6 LIG3 WAPL BBX RRP1B PHF3 GPATCH1 ZNF638 RRP15 BOD1L1 ICE1 SRFBP1 POLR1G SRRM2 HDGFL2 CIC AFF4

2.61e-089289119int:XRCC6
InteractionAPEX1 interactions

PHF2 HAUS8 LIG3 WAPL FAM193A BBX ARHGEF28 CENPC RRP1B TCOF1 PHF3 ZNF638 RRP15 SRFBP1 TTK DEK HDGFL2 SDAD1 AFF4 PRDM2 MRTFA SMTN

3.47e-0812719122int:APEX1
InteractionPOLR1E interactions

PHF2 BBX CENPC RRP1B TCOF1 BAZ2B RRP15 ISG20L2 ICE1 SRFBP1 POLR1G SDAD1

5.75e-083509112int:POLR1E
InteractionH3C1 interactions

MSH6 LIG3 WAPL BBX CENPC RRP1B PHF3 H1-6 ZNF638 SRFBP1 POLR1G PQBP1 DEK HDGFL2 SDAD1 AFF4 PRDM2 HDGFL3

9.32e-089019118int:H3C1
InteractionMYCN interactions

LIG3 SRSF10 BBX SFSWAP RRP1B TCOF1 PHF3 GPATCH1 H1-6 ZNF638 DNAJC21 ANKRD17 RRP15 ISG20L2 SRFBP1 POLR1G SRRM2 PQBP1 DEK HDGFL2 SDAD1 SRSF12

1.35e-0713739122int:MYCN
InteractionMECP2 interactions

MYL12A PHF2 PPP1R10 MSH6 LIG3 ZNF800 SRSF10 BBX SFSWAP RRP1B TCOF1 H1-6 APC ZNF638 PPIP5K2 POLR1G SRRM2 DEK MED12 SDAD1 AFF4

2.05e-0712879121int:MECP2
InteractionMEN1 interactions

PPP1R10 LIG3 SRSF10 WAPL ZNF608 RRP1B TCOF1 GPATCH1 ZNF638 ANKRD17 RRP15 BOD1L1 POLR1G SRRM2 DEK MED12 SDAD1 AFF4

6.59e-0710299118int:MEN1
InteractionCENPA interactions

PHF2 MSH6 LIG3 BBX CENPC RRP1B ISG20L2 DEK HDGFL2 SDAD1 PRDM2

1.05e-063779111int:CENPA
InteractionYWHAH interactions

TET2 HAUS8 SRSF10 ARHGEF28 SASH1 SFSWAP PHF3 MOB1A APC ZNF638 ANKRD17 BOD1L1 PPIP5K2 SRRM2 TTK CIC MAP3K2 SRSF12

1.76e-0611029118int:YWHAH
InteractionPPIA interactions

SRSF10 BBX PHF3 MACO1 DNAJC21 ISG20L2 SRRM2 PQBP1 WASHC2A HDGFL2 CIC MED12 SDAD1 MRTFA KLB SMTN

2.07e-068889116int:PPIA
InteractionSSRP1 interactions

PHF2 PPP1R10 MSH6 LIG3 PHF3 ZNF638 SRFBP1 POLR1G SRRM2 PQBP1 HDGFL2 CIC SDAD1 MRTFA

2.29e-066859114int:SSRP1
InteractionCSNK2B interactions

PHF2 LIG3 BRDT RRP1B TCOF1 BAZ2B APC RRP15 TSEN54 DEK HDGFL2 ZEB2 CIC

4.52e-066259113int:CSNK2B
InteractionZNF330 interactions

PHF2 MSH6 LIG3 BBX CENPC RRP1B PHF3 SRFBP1 DEK SDAD1 AFF4

5.31e-064469111int:ZNF330
InteractionSNRNP40 interactions

CASP8AP2 SRSF10 SFSWAP ZNF608 CENPC RRP1B TCOF1 BAZ2B GPATCH1 SRRM2 PQBP1 HDGFL2 MED12

5.55e-066379113int:SNRNP40
InteractionCBX3 interactions

LIG3 CACNB4 WAPL BBX CENPC TCOF1 PHF3 SRFBP1 SRRM2 MYL12B DEK HDGFL2 CIC

6.45e-066469113int:CBX3
InteractionCDC14B interactions

PHF2 MSH6 CENPC RRP1B SRFBP1 DEK SDAD1

7.43e-06158917int:CDC14B
InteractionNLE1 interactions

CENPC RRP1B TCOF1 BAZ2B GPATCH1 RRP15 SRRM2 SMTN

9.00e-06228918int:NLE1
InteractionACTC1 interactions

TGFB2 MYL12A MSH6 TCOF1 PHF3 RRP15 BOD1L1 SRRM2 WASHC2A TTK HDGFL2 CIC MRTFA

1.39e-056949113int:ACTC1
InteractionBRD3 interactions

PHF2 LIG3 BBX SFSWAP CENPC RRP1B POLR1G SRRM2 DEK ANAPC7 HDGFL3

1.39e-054949111int:BRD3
InteractionH2BC21 interactions

PHF2 PPP1R10 MSH6 LIG3 PHF3 H1-6 ZNF638 DNAJC21 SRRM2 DEK ANAPC7 LMNTD1 PRDM2

1.43e-056969113int:H2BC21
InteractionDHX40 interactions

PHF2 CENPC BRDT RRP1B ZNF638 RRP15 SDAD1 PRDM2

1.70e-05249918int:DHX40
InteractionPARP1 interactions

PHF2 MSH6 LIG3 SRSF10 BBX CENPC RRP1B PHF3 PKNOX1 RRP15 SRFBP1 ANAPC7 HDGFL2 CIC SDAD1 AFF4 PRDM2 HDGFL3

2.04e-0513169118int:PARP1
InteractionCIT interactions

PHF2 MSH6 LIG3 SRSF10 MYL9 RRP1B TCOF1 H1-6 ZNF638 RRP15 BOD1L1 SRFBP1 POLR1G SRRM2 MYL12B DEK ANAPC7 HDGFL2 SRSF12

2.10e-0514509119int:CIT
InteractionFGFBP1 interactions

BBX RRP1B H1-6 ZNF638 ANKRD17 RRP15 POLR1G SDAD1

2.14e-05257918int:FGFBP1
InteractionNIFK interactions

BBX CENPC RRP1B TCOF1 PHF3 RRP15 SRFBP1 POLR1G SDAD1 AFF4

2.47e-054319110int:NIFK
InteractionMAGEB2 interactions

ZNF800 BBX RRP1B H1-6 RRP15 SRFBP1 POLR1G SDAD1 SRSF12

2.84e-05349919int:MAGEB2
InteractionRPS6 interactions

PHF2 LIG3 BBX CENPC RRP1B PPP1R13B RRP15 ISG20L2 SRFBP1 DEK CXorf65 CIC SDAD1 SRSF12

3.58e-058749114int:RPS6
InteractionCEBPA interactions

TGFB2 PHF2 TET2 MSH6 LIG3 RRP1B BAZ2B TOMM34 SRRM2 PQBP1 DEK ANAPC7 HDGFL2 ZEB2 CIC MED12 PRDM2

3.68e-0512459117int:CEBPA
InteractionCOIL interactions

PHF2 CASP8AP2 MSH6 BBX CENPC BAZ2B ICE1 SRFBP1 POLR1G SDAD1 AFF4

3.85e-055529111int:COIL
InteractionNOP56 interactions

PHF2 CENPC BRDT RRP1B TCOF1 RRP15 SRFBP1 POLR1G DEK SDAD1 AFF4

5.14e-055709111int:NOP56
InteractionH2BC8 interactions

PHF2 MSH6 LIG3 WAPL BBX CENPC PHF3 RRP15 SRFBP1 DEK HDGFL2

5.65e-055769111int:H2BC8
InteractionSFN interactions

TET2 HAUS8 SRSF10 ARHGEF28 SASH1 PHF3 APC ZNF638 ANKRD17 SRRM2 DEK MAP3K2

6.44e-056929112int:SFN
InteractionDOT1L interactions

MYL12A SRSF10 WAPL SFSWAP RRP1B TCOF1 PHF3 ZNF638 RRP15 POLR1G SRRM2 DEK SDAD1

6.61e-058079113int:DOT1L
InteractionKIF20A interactions

SRSF10 MYL9 SFSWAP IRAG2 H1-6 ZNF638 BOD1L1 POLR1G SRRM2 MYL12B DEK ZEB2 SRSF12 KLB SMTN

6.94e-0510529115int:KIF20A
InteractionRCOR1 interactions

CASP8AP2 MSH6 FAM193A APC ANKRD17 ICE1 ZEB2 CIC MED12 MRTFA

7.78e-054949110int:RCOR1
InteractionSUPT5H interactions

PHF2 PPP1R10 MSH6 PHF3 ICE1 POLR1G WASHC2A ZEB2 CIC

9.48e-05408919int:SUPT5H
InteractionNAA40 interactions

PPP1R10 MSH6 LIG3 WAPL FAM193A TCOF1 GPATCH1 ZNF638 ANKRD17 BOD1L1 ICE1 HDGFL2 CIC AFF4

1.19e-049789114int:NAA40
InteractionTWIST1 interactions

PHF2 BBX RRP1B YY2 DEK ZEB2

1.22e-04170916int:TWIST1
InteractionSIRT6 interactions

MSH6 WAPL RRP1B TCOF1 PHF3 GPATCH1 APC ANKRD17 ANAPC7 MED12 SDAD1

1.22e-046289111int:SIRT6
InteractionHECTD1 interactions

MSH6 LIG3 SFSWAP RRP1B PHF3 GPATCH1 APC DNAJC21 RRP15 ISG20L2 POLR1G DEK MED12 SDAD1

1.27e-049849114int:HECTD1
InteractionYWHAG interactions

TET2 HAUS8 SRSF10 ARHGEF28 SASH1 PHF3 APC ZNF638 ANKRD17 BOD1L1 PPIP5K2 SRRM2 TTK CIC MAP3K2 SRSF12

1.35e-0412489116int:YWHAG
InteractionRASA2 interactions

TCOF1 HDGFL2 AFF4

2.15e-0426913int:RASA2
InteractionPYHIN1 interactions

LIG3 SRSF10 TCOF1 PHF3 ANKRD17 SRRM2 HDGFL2 SDAD1

2.16e-04358918int:PYHIN1
InteractionMYH10 interactions

MYL12A TET2 MSH6 MYL9 TCOF1 APC MYL12B DEK

2.20e-04359918int:MYH10
InteractionDDX10 interactions

H1-6 DNAJC21 BOD1L1 SRFBP1 POLR1G WASHC2A

2.23e-04190916int:DDX10
InteractionTRRAP interactions

CASP8AP2 LIG3 WAPL MYL9 TCOF1 IRAG2 ZNF638 POLR1G ANAPC7 MED12 MRTFA MAP3K19

2.23e-047909112int:TRRAP
InteractionMYL9 interactions

MYL12A TET2 MYL9 MYL12B

2.40e-0467914int:MYL9
InteractionRPL31 interactions

PHF2 LIG3 BBX CENPC RRP1B TCOF1 H1-6 RRP15 ISG20L2 SRFBP1 SDAD1

2.43e-046809111int:RPL31
InteractionCDK9 interactions

MYL12A PPP1R10 BRDT TCOF1 APC ZNF638 RRP15 SRRM2 MYL12B MED12 AFF4

2.59e-046859111int:CDK9
InteractionFOXD3 interactions

LIG3 MYL9 MYL12B

2.69e-0428913int:FOXD3
InteractionRNF113A interactions

TET2 MSH6 ZNF800 FAM193A BBX RRP1B TCOF1 ANKRD17 RRP15 POLR1G SRRM2

2.82e-046929111int:RNF113A
InteractionTLE3 interactions

TGFB2 TET2 FAM193A ZNF608 BAZ2B GPATCH1 SRRM2 CIC

3.01e-04376918int:TLE3
InteractionKDM1A interactions

TET2 CASP8AP2 MSH6 FAM193A ZNF608 APC ANKRD17 ICE1 ZEB2 CIC MED12 PRDM2 MRTFA

3.02e-049419113int:KDM1A
InteractionPOU5F1 interactions

PPP1R10 MSH6 LIG3 WAPL BRDT TCOF1 PHF3 H1-6 ANKRD17 DEK

3.02e-045849110int:POU5F1
InteractionDCAF4 interactions

SRSF10 FAM193A CENPC TCOF1 BAZ2B GPATCH1 APC SRRM2

3.12e-04378918int:DCAF4
InteractionDNAJC17 interactions

CENPC TCOF1 GPATCH1 SRRM2 HDGFL2

3.55e-04134915int:DNAJC17
InteractionMAPKAPK2 interactions

PPP1R10 SFSWAP PHF3 ZNF638 HDGFL2

3.55e-04134915int:MAPKAPK2
InteractionWDR5 interactions

MYL12A TET2 SRSF10 ZNF608 H1-6 TOMM34 BOD1L1 TTK DEK ANAPC7 HDGFL2 CIC SDAD1 WDR53

4.04e-0411019114int:WDR5
InteractionHDAC1 interactions

TET2 CASP8AP2 MSH6 ZNF800 BBX ZNF608 APC ZNF638 ANKRD17 POLR1G ZEB2 CIC MED12 MRTFA

4.30e-0411089114int:HDAC1
InteractionPIP4K2A interactions

PPP1R10 RRP1B TCOF1 SRRM2 HDGFL2 AFF4

4.42e-04216916int:PIP4K2A
InteractionSRSF6 interactions

SRSF10 BBX CENPC RRP1B H1-6 ZNF638 SRRM2 CIC SRSF12

4.47e-04503919int:SRSF6
InteractionARRB1 interactions

SASH1 TCOF1 ARHGEF18 POLR1G SRRM2 MYL12B HDGFL2

4.55e-04304917int:ARRB1
InteractionYWHAQ interactions

TET2 SRSF10 ARHGEF28 SASH1 MACO1 H1-6 APC ZNF638 ANKRD17 PPIP5K2 MYL12B CIC MAP3K2 SRSF12

4.70e-0411189114int:YWHAQ
InteractionANOS1 interactions

ZNF800 BBX RRP1B ISG20L2 SRFBP1

4.78e-04143915int:ANOS1
InteractionPKNOX1 interactions

TET2 TCOF1 APC PKNOX1

5.20e-0482914int:PKNOX1
InteractionDBX2 interactions

PPP1R10 ANKRD17

5.55e-048912int:DBX2
InteractionMDC1 interactions

MYL12A LIG3 CENPC PHF3 BOD1L1 ICE1 ANAPC7 MED12

5.70e-04414918int:MDC1
InteractionDENND2D interactions

TCOF1 SRRM2 AFF4

5.71e-0436913int:DENND2D
InteractionZC3H18 interactions

SRSF10 SFSWAP RRP1B TCOF1 RRP15 ISG20L2 SRFBP1 POLR1G SRRM2 PQBP1 DEK SRSF12

5.71e-048779112int:ZC3H18
InteractionSOX2 interactions

TET2 MSH6 LIG3 ZNF608 RRP1B BAZ2B MACO1 ZNF638 ANKRD17 RRP15 BOD1L1 WASHC2A ANAPC7 ZEB2 CIC SDAD1

5.83e-0414229116int:SOX2
InteractionFOXA1 interactions

PHF2 SRSF10 TOMM34 RRP15 ISG20L2 POLR1G DEK SDAD1 SRSF12

6.08e-04525919int:FOXA1
InteractionYWHAB interactions

TET2 SRSF10 ARHGEF28 SASH1 PHF3 APC ZNF638 ANKRD17 PPIP5K2 SRRM2 CIC MAP3K2 SRSF12

6.13e-0410149113int:YWHAB
InteractionHECW2 interactions

SRSF10 PHF3 MOB1A ZNF638 TOMM34 MED12 AFF4

6.40e-04322917int:HECW2
InteractionRPS24 interactions

PHF2 CENPC RRP1B H1-6 RRP15 ISG20L2 SRFBP1 CIC SDAD1

6.42e-04529919int:RPS24
InteractionBRD2 interactions

PHF2 LIG3 SRSF10 BRDT PKNOX1 POLR1G DEK HDGFL2

7.19e-04429918int:BRD2
InteractionH1-4 interactions

SRSF10 BBX RRP1B TCOF1 PHF3 H1-6 ZNF638 RRP15 ISG20L2 SDAD1

7.48e-046569110int:H1-4
InteractionYWHAZ interactions

TET2 SRSF10 ARHGEF28 SASH1 PHF3 MACO1 IRAG2 APC ZNF638 ANKRD17 ARHGEF18 PPIP5K2 DEK CIC MAP3K2

7.92e-0413199115int:YWHAZ
InteractionNFKBIL1 interactions

SRSF10 SRRM2 HDGFL2 AFF4

8.36e-0493914int:NFKBIL1
InteractionDYRK1A interactions

MYL12A HAUS8 SRSF10 MYL9 TCOF1 TOMM34 ICE1 TTK CIC

8.68e-04552919int:DYRK1A
InteractionHOXA5 interactions

PPP1R10 RRP1B ANKRD17 CIC

8.70e-0494914int:HOXA5
InteractionH2BC9 interactions

CASP8AP2 BAZ2B H1-6 DNAJC21 TEX15 DEK HDGFL2 AFF4

9.24e-04446918int:H2BC9
InteractionPHF21A interactions

CASP8AP2 FAM193A APC ICE1 ZEB2 CIC MRTFA

9.27e-04343917int:PHF21A
Cytoband12p12.1

IRAG2 LMNTD1

1.52e-032991212p12.1
Cytoband18p11.31

MYL12A MYL12B

1.52e-032991218p11.31
CytobandEnsembl 112 genes in cytogenetic band chr5q23

ZNF608 GRAMD2B SRFBP1

1.66e-03117913chr5q23
Cytoband6q15

CASP8AP2 SRSF12

1.74e-03319126q15
Cytoband5q23.2

ZNF608 GRAMD2B

1.85e-03329125q23.2
Cytoband2p13.1

MOB1A ZNF638

2.09e-03349122p13.1
GeneFamilyMyosin light chains|EF-hand domain containing

MYL12A MYL9 MYL12B

7.53e-0614513657
GeneFamilyArmadillo repeat containing|Protein phosphatase 1 regulatory subunits

PPP1R10 SRSF10 RRP1B APC PPP1R13B

1.54e-04181515694
GeneFamilyRNA binding motif containing|Serine and arginine rich splicing factors

SRSF10 SRSF12

5.06e-0412512737
GeneFamilyMitogen-activated protein kinase kinase kinases|RAF family

MAP3K2 MAP3K19

2.07e-0324512654
GeneFamilyPHD finger proteins

PHF2 BAZ2B PHF3

2.09e-039051388
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

TGFB2 MSH6 WAPL FAM193A BBX SASH1 CENPC BAZ2B PHF3 APC ZNF638 ANKRD17 PPIP5K2 TTK DEK ZEB2 MRTFA

4.67e-098569017M4500
CoexpressionGSE40666_NAIVE_VS_EFFECTOR_CD8_TCELL_UP

MSH6 SRSF10 LRRC42 FAM193A SPATA6 ZNF608 BAZ2B MACO1 PPP1R13B

3.03e-08200909M9203
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

CASP8AP2 BBX CENPC BAZ2B PHF3 APC ZNF638 ZNF302 PPIP5K2 TTK DEK SDAD1 MAP3K2

3.77e-076569013M18979
CoexpressionDAZARD_RESPONSE_TO_UV_NHEK_DN

WAPL BBX CENPC RRP1B BAZ2B PHF3 ZNF638 ICE1 PPIP5K2

9.38e-07300909M8702
CoexpressionBURTON_ADIPOGENESIS_12

CASP8AP2 SRSF10 ZNF638 BOD1L1

4.34e-0632904MM668
CoexpressionBURTON_ADIPOGENESIS_12

CASP8AP2 SRSF10 ZNF638 BOD1L1

4.34e-0632904M1558
CoexpressionGSE18893_TCONV_VS_TREG_2H_TNF_STIM_DN

TET2 BAZ2B BOD1L1 ANKRD12 ZEB2 AFF4 MAP3K2

4.86e-06194907M7306
CoexpressionGSE19888_ADENOSINE_A3R_INH_PRETREAT_AND_ACT_BY_A3R_VS_A3R_INH_AND_TCELL_MEMBRANES_ACT_MAST_CELL_UP

TET2 BAZ2B APC BOD1L1 ZEB2 PRDM2 MAP3K2

4.86e-06194907M7313
CoexpressionGSE14308_TH2_VS_NAIVE_CD4_TCELL_DN

SFSWAP TCOF1 APC SPO11 CIC MRTFA MAP3K2

5.93e-06200907M3365
CoexpressionGSE2770_TGFB_AND_IL4_VS_TGFB_AND_IL12_TREATED_ACT_CD4_TCELL_6H_DN

BAZ2B PHF3 MACO1 GRAMD2B H1-6 ANKRD17 MED12

5.93e-06200907M6102
CoexpressionHE_LIM_SUN_FETAL_LUNG_C2_CYCLING_DC_CELL

CASP8AP2 HAUS8 MSH6 LRRC42 HEATR6 CENPC RRP1B TCOF1 DNAJC21 TOMM34 TSEN54 ISG20L2 POLR1G TTK ANAPC7 HDGFL2 HDGFL3

6.04e-0614239017M45722
CoexpressionDAZARD_UV_RESPONSE_CLUSTER_G6

WAPL BBX CENPC RRP1B PHF3 ZNF638

1.10e-05145906M1810
CoexpressionPUJANA_ATM_PCC_NETWORK

MSH6 SRSF10 CENPC RRP1B TCOF1 PHF3 IRAG2 MOB1A APC ARHGEF18 ISG20L2 ICE1 SIM2 PPIP5K2 DEK PRDM2

1.94e-0513949016M9585
CoexpressionCHIARETTI_T_ALL_RELAPSE_PROGNOSIS

IRAG2 TTK DEK

3.65e-0519903M17204
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

MYL12A ZNF800 SRSF10 WAPL BBX CENPC PHF3 ZNF638 BOD1L1 TSEN54 ICE1 MYL12B DEK ZEB2 PRDM2 MAP3K2

4.41e-0514929016M40023
CoexpressionGSE37534_UNTREATED_VS_PIOGLITAZONE_TREATED_CD4_TCELL_PPARG1_AND_FOXP3_TRASDUCED_UP

TGFB2 PHF2 SRSF10 TCOF1 BAZ2B ZEB2

6.16e-05197906M8980
CoexpressionGSE25088_IL4_VS_IL4_AND_ROSIGLITAZONE_STIM_STAT6_KO_MACROPHAGE_DAY10_UP

PHF2 MSH6 BAZ2B PHF3 IRAG2 MAP3K2

6.33e-05198906M7944
CoexpressionGSE25088_ROSIGLITAZONE_VS_IL4_AND_ROSIGLITAZONE_STIM_STAT6_KO_MACROPHAGE_DAY10_UP

PHF2 BAZ2B BOD1L1 CIC MRTFA MAP3K2

6.33e-05198906M7948
CoexpressionGSE17721_LPS_VS_CPG_0.5H_BMDC_UP

BRDT TEX15 PQBP1 MYL12B TTK MRTFA

6.33e-05198906M3982
CoexpressionGSE43863_DAY6_EFF_VS_DAY150_MEM_TH1_CD4_TCELL_DN

TET2 HEATR6 BBX GRAMD2B DNAJC21 MRTFA

6.51e-05199906M9744
CoexpressionGSE18281_SUBCAPSULAR_CORTICAL_REGION_VS_WHOLE_MEDULLA_THYMUS_UP

TCOF1 SIM2 SRRM2 TTK MED12 AFF4

6.51e-05199906M7254
CoexpressionGSE18791_CTRL_VS_NEWCASTLE_VIRUS_DC_4H_UP

HEATR6 ARHGEF28 IRAG2 ZNF302 POLR1G WDR53

6.51e-05199906M4260
CoexpressionGSE6674_ANTI_IGM_VS_ANTI_IGM_AND_CPG_STIM_BCELL_UP

SPATA6 BRDT GRAMD2B ARHGEF18 SPO11 IFT122

6.51e-05199906M6934
CoexpressionGSE43863_DAY6_EFF_VS_DAY150_MEM_LY6C_INT_CXCR5POS_CD4_TCELL_DN

SPATA6 ZNF608 BAZ2B GRAMD2B ARHGEF18 MRTFA

6.69e-05200906M9733
CoexpressionGSE27786_LIN_NEG_VS_CD8_TCELL_DN

SPATA6 TOMM34 WASHC2A CIC PRDM2 MAP3K2

6.69e-05200906M4777
CoexpressionGSE26890_CXCR1_NEG_VS_POS_EFFECTOR_CD8_TCELL_UP

TET2 XAF1 ANKRD12 DEK ZEB2 FBXO34

6.69e-05200906M8559
CoexpressionGSE17721_POLYIC_VS_PAM3CSK4_4H_BMDC_UP

HAUS8 SASH1 BRDT TCOF1 BAZ2B GRAMD2B

6.69e-05200906M3832
CoexpressionBENPORATH_CYCLING_GENES

CASP8AP2 PPP1R10 HAUS8 SRSF10 PKNOX1 TOMM34 TTK CIC MAP3K2 SMTN

7.70e-056489010M8156
CoexpressionMENON_FETAL_KIDNEY_4_PODOCYTES

BBX MYL9 BAZ2B ANKRD12 SRRM2 MYL12B

7.88e-05206906M39254
CoexpressionSHEN_SMARCA2_TARGETS_UP

SRSF10 CENPC BAZ2B PHF3 APC ANKRD17 ZNF302 DEK

1.16e-04429908M29
CoexpressionBUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP

WAPL SFSWAP BAZ2B PHF3 PKNOX1 ANKRD12 SIM2 ZEB2 AFF4 MRTFA MAP3K2

1.18e-048229011M6782
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_3DY_DN

SRSF10 BBX RRP1B PHF3 TSEN54 CXorf65 AFF4 PRDM2

1.22e-04432908M41149
CoexpressionFEVR_CTNNB1_TARGETS_DN

CASP8AP2 HAUS8 MSH6 RRP1B RRP15 ICE1 PQBP1 TTK DEK

1.24e-04555909M2343
CoexpressionGINESTIER_BREAST_CANCER_ZNF217_AMPLIFIED_DN

HAUS8 SFSWAP TCOF1 ZNF638 SRRM2 PQBP1 CIC

1.67e-04338907M17094
CoexpressionBLUM_RESPONSE_TO_SALIRASIB_DN

CASP8AP2 MSH6 SRSF10 APC SIM2 TTK DEK

1.76e-04341907M2879
CoexpressionKIM_WT1_TARGETS_DN

TGFB2 SRSF10 CENPC BAZ2B PHF3 ANKRD12 ZNF302 TTK

2.19e-04471908M17859
CoexpressionGSE7348_UNSTIM_VS_TOLERIZED_AND_LPS_STIM_MACROPHAGE_UP

PHF2 RRP1B PHF3 ZNF638 MAP3K2

2.44e-04162905M6847
CoexpressionTABULA_MURIS_SENIS_BROWN_ADIPOSE_TISSUE_MESENCHYMAL_STEM_CELL_OF_ADIPOSE_AGEING

MYL12A PHF2 TET2 ZNF800 MYL9 ZNF608 ZNF638 PQBP1 MYL12B PRDM2 MAP3K2 HDGFL3

2.58e-0410559012MM3677
CoexpressionLEE_BMP2_TARGETS_DN

CASP8AP2 MSH6 SRSF10 RRP1B TCOF1 DNAJC21 RRP15 ISG20L2 SRFBP1 TTK SDAD1

2.68e-049049011M2325
CoexpressionGSE25146_UNSTIM_VS_HELIOBACTER_PYLORI_LPS_STIM_AGS_CELL_DN

SRSF10 PKNOX1 BOD1L1 XAF1 AFF4

2.73e-04166905M8129
CoexpressionGSE4984_GALECTIN1_VS_LPS_STIM_DC_DN

IRAG2 TSEN54 ISG20L2 ICE1 TEX15

2.97e-04169905M6504
CoexpressionDE_YY1_TARGETS_DN

TGFB2 CASP8AP2 APC TTK

3.01e-0493904M3278
CoexpressionLEE_BMP2_TARGETS_DN

CASP8AP2 MSH6 SRSF10 RRP1B TCOF1 DNAJC21 RRP15 ISG20L2 SRFBP1 TTK SDAD1

3.17e-049229011MM1068
CoexpressionGSE40274_CTRL_VS_LEF1_TRANSDUCED_ACTIVATED_CD4_TCELL_UP

CACNB4 SPO11 PQBP1 MYL12B ZEB2

3.22e-04172905M9090
CoexpressionNAKAYA_MYELOID_DENDRITIC_CELL_FLUMIST_AGE_18_50YO_7DY_UP

SPATA6 GRAMD2B ISG20L2 ANKRD12 PQBP1 PRDM2 MAP3K2

3.28e-04378907M41174
CoexpressionKRAS.600_UP.V1_DN

TGFB2 SPATA6 MYL9 BRDT XAF1 TEX15

4.06e-04279906M2880
CoexpressionGSE7348_LPS_VS_TOLERIZED_AND_LPS_STIM_MACROPHAGE_UP

PHF2 RRP1B MACO1 ZNF638 MAP3K2

4.06e-04181905M6849
CoexpressionFISCHER_DREAM_TARGETS

CASP8AP2 PPP1R10 HAUS8 MSH6 SRSF10 CENPC TCOF1 PKNOX1 ANKRD17 TTK DEK

4.82e-049699011M149
CoexpressionGSE45365_WT_VS_IFNAR_KO_CD11B_DC_MCMV_INFECTION_UP

TCEA3 TCOF1 PPP1R13B ARHGEF18 CIC

5.44e-04193905M9975
CoexpressionNAKAYA_PBMC_FLUMIST_AGE_18_50YO_3DY_DN

BBX SFSWAP CENPC PHF3 IRAG2 BOD1L1 AFF4 PRDM2 MAP3K2

5.50e-04680909M41089
CoexpressionGSE19888_CTRL_VS_A3R_INHIBITOR_TREATED_MAST_CELL_DN

TET2 BAZ2B ZNF638 BOD1L1 ZEB2

5.70e-04195905M7310
CoexpressionGSE20152_SPHK1_KO_VS_WT_HTNFA_OVERXPRESS_ANKLE_UP

LIG3 MACO1 RRP15 PRDM2 MAP3K19

6.11e-04198905M7684
CoexpressionGSE41867_NAIVE_VS_DAY8_LCMV_ARMSTRONG_EFFECTOR_CD8_TCELL_DN

SPATA6 MACO1 SPO11 SIM2 MED12

6.25e-04199905M9498
CoexpressionGSE27786_LSK_VS_BCELL_DN

TET2 TCOF1 ANKRD12 WASHC2A CIC

6.25e-04199905M4744
CoexpressionGSE24210_IL35_TREATED_VS_UNTREATED_TCONV_CD4_TCELL_UP

TET2 GRAMD2B IRAG2 PPIP5K2 SRSF12

6.25e-04199905M7845
CoexpressionGSE33162_HDAC3_KO_VS_HDAC3_KO_MACROPHAGE_UP

PPP1R10 TOMM34 RRP15 CIC MRTFA

6.25e-04199905M9038
CoexpressionGSE32423_MEMORY_VS_NAIVE_CD8_TCELL_IL7_IL4_DN

BBX CENPC BAZ2B MACO1 PPIP5K2

6.39e-04200905M5081
CoexpressionGSE11961_MEMORY_BCELL_DAY7_VS_GERMINAL_CENTER_BCELL_DAY40_UP

TCOF1 RRP15 ISG20L2 XAF1 DEK

6.39e-04200905M9358
CoexpressionGSE22601_DOUBLE_POSITIVE_VS_CD8_SINGLE_POSITIVE_THYMOCYTE_DN

PPP1R10 MSH6 CENPC PQBP1 ANAPC7

6.39e-04200905M6249
CoexpressionGSE20152_SPHK1_KO_VS_WT_HTNFA_OVERXPRESS_ANKLE_DN

BBX CENPC BAZ2B ARHGEF18 TTK

6.39e-04200905M7686
CoexpressionGSE2826_WT_VS_BTK_KO_BCELL_UP

TCEA3 CENPC ANKRD17 MAP3K2 SMTN

6.39e-04200905M4898
CoexpressionGSE28237_FOLLICULAR_VS_EARLY_GC_BCELL_UP

SFSWAP APC ZNF638 TOMM34 BOD1L1

6.39e-04200905M4884
CoexpressionGSE360_DC_VS_MAC_UP

MYL12A MOB1A ARHGEF18 ISG20L2 MED12

6.39e-04200905M5172
CoexpressionGSE5099_UNSTIM_VS_MCSF_TREATED_MONOCYTE_DAY3_DN

PHF2 ZNF608 TCOF1 TOMM34 WASHC2A

6.39e-04200905M6583
CoexpressionGSE27786_LIN_NEG_VS_CD4_TCELL_DN

TET2 SPO11 WASHC2A MED12 PRDM2

6.39e-04200905M4773
CoexpressionGSE18791_CTRL_VS_NEWCASTLE_VIRUS_DC_6H_UP

IRAG2 ZNF302 POLR1G MRTFA WDR53

6.39e-04200905M4262
CoexpressionGSE36891_UNSTIM_VS_POLYIC_TLR3_STIM_PERITONEAL_MACROPHAGE_DN

ZNF800 SASH1 TCOF1 PPP1R13B PPIP5K2

6.39e-04200905M8781
CoexpressionGSE7764_NKCELL_VS_SPLENOCYTE_DN

SASH1 XAF1 SRFBP1 MED12 FBXO34

6.39e-04200905M5722
CoexpressionMEBARKI_HCC_PROGENITOR_WNT_UP

TGFB2 ZNF608 TCOF1 TEX15 MRTFA

6.69e-04202905M38982
CoexpressionAtlasfacebase_RNAseq_e10.5_MaxArch_2500_K3

TET2 CASP8AP2 PPP1R10 ZNF800 SRSF10 WAPL CENPC RRP1B TCOF1 APC ZNF638 DNAJC21 BOD1L1 IFT122 ANKRD12 PPIP5K2 TTK DEK HDGFL3

8.31e-0712528919facebase_RNAseq_e10.5_MaxArch_2500_K3
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000

TGFB2 LIG3 HEATR6 FAM193A BBX SFSWAP PHF3 MOB1A APC ZEB2

4.86e-063858910gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3

CASP8AP2 MSH6 ZNF800 WAPL BBX CENPC PHF3 MACO1 ZNF638 TTK ZEB2

1.38e-055328911Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

CASP8AP2 MSH6 ZNF800 WAPL FAM193A CENPC RRP1B TCOF1 PHF3 APC DNAJC21 BOD1L1 PQBP1 TTK DEK HDGFL3

6.05e-0512578916facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5

CASP8AP2 MSH6 WAPL ZNF638 BOD1L1 SIM2

1.33e-04186896Facebase_RNAseq_e10.5_Mandibular Arch_500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_1000_k-means-cluster#5

HAUS8 BBX TCOF1 RRP15 TSEN54

1.63e-04122895Facebase_RNAseq_e10.5_Maxillary Arch_1000_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

CASP8AP2 ZNF800 HEATR6 FAM193A DNAJC21 BOD1L1 SIM2 DEK AFF4 FBXO34 MRTFA MAP3K19

1.78e-048318912Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500

CASP8AP2 MSH6 WAPL CSTL1 ZNF638 BOD1L1 SIM2 PPIP5K2 MAP3K19

2.20e-04492899Facebase_RNAseq_e10.5_Mandibular Arch_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#2_top-relative-expression-ranked_500

TGFB2 LIG3 HEATR6 PHF3 APC ZEB2

2.49e-04209896gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500_k2
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

TET2 SRSF10 CENPC PHF3 BOD1L1 XAF1 ANKRD12 SRRM2 ZEB2 AFF4 PRDM2

3.52e-13200911112f1685ce8f218433068e090c9d839cd5a1910bf
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

TET2 BBX BAZ2B PHF3 DNAJC21 BOD1L1 XAF1 ANKRD12 DEK

3.10e-10199919c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCellBrain_organoid-organoid_Kanton_Nature|Brain_organoid / Sample Type, Dataset, Time_group, and Cell type.

CASP8AP2 SRSF10 WAPL BBX BAZ2B ICE1 SRRM2 DEK

4.46e-09185918857c7ca8493e91ef1d0078ddafd6082020f9b169
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

SRSF10 CENPC PHF3 BOD1L1 XAF1 ANKRD12 SRRM2 ZEB2

7.30e-091979185c33454b10023decd2f5ccda9229b6512659711e
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

SRSF10 CENPC PHF3 BOD1L1 XAF1 ANKRD12 SRRM2 ZEB2

7.59e-0919891844417089b62056269cac38d3134ff209c05b7007
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

SRSF10 CENPC PHF3 BOD1L1 XAF1 ANKRD12 SRRM2 ZEB2

7.59e-0919891828ef3fc4c17dcb765537b75917f7db78baa522db
ToppCellCOVID-19|World / Disease, condition lineage and cell class

SRSF10 PHF3 BOD1L1 XAF1 ANKRD12 SRRM2 AFF4 PRDM2

8.21e-092009187dec470c379cd89f05a0f37c8628b21f136e52f0
ToppCell(02)_MMP9/10+-(2)_GFP_FOXI1|(02)_MMP9/10+ / shred by cell type by condition

BBX MYL9 PHF3 DNAJC21 BOD1L1 XAF1 ANKRD12

1.76e-0719991718a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCellsaliva-Severe-critical_progression_d12-22_with-steroid-Myeloid-Granulocytic|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

TET2 CENPC BOD1L1 SDAD1 MRTFA MAP3K2

1.41e-061719162b7c5a557c4bc5c573211c4d618bdd6766a24916
ToppCellsaliva-Severe-critical_progression_d12-22_with-steroid-Myeloid-Granulocytic-Neutrophil|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

TET2 CENPC BOD1L1 SDAD1 MRTFA MAP3K2

1.41e-06171916dcb15bc54aeea06ef8f07f1134f3ff1e21ac0e4f
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PPP1R10 ZNF608 PHF3 APC ZNF638 ZEB2

2.15e-061849161154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellTCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1|TCGA-Pancreas / Sample_Type by Project: Shred V9

CASP8AP2 WAPL APC BOD1L1 ANKRD12 SRFBP1

2.29e-0618691603db813598b67b1e08f759758a1c2023396921fa
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25|PBMC_fresh-frozen / Compartment, severity and other cell annotations on 10x 3' data (130k)

SRSF10 CENPC PHF3 MACO1 SRRM2 PRDM2

2.67e-061919161ecd9849d14d5ebf3daf610e83fb50820cafd3ed
ToppCellH1299-infected|H1299 / Cell line, Condition and Strain

TCOF1 BOD1L1 IFT122 ANKRD12 POLR1G SRRM2

2.75e-061929169cf8049bdc3e0f81ce69042beac72b08d8f38b4e
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

MYL12A TCOF1 PHF3 ZNF638 XAF1 ANKRD12

3.29e-061989164c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCellNS-moderate-d_07-13-Epithelial-FOXN4+|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

SPATA6 H1-6 IFT122 LMNTD1 ZBBX

1.77e-05157915410c9d74a2085179cfb39853cb6d330fa98c9c1b
ToppCelldroplet-Limb_Muscle-MUSCLE-30m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CASP8AP2 PPP1R10 ZNF800 WAPL SRRM2

3.24e-0517891501dafd19de04eff459253eaa9a35debf8f3deedf
ToppCelldroplet-Marrow-nan-3m-Hematologic-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CASP8AP2 PPP1R10 GRAMD2B BOD1L1 HDGFL3

3.60e-05182915e78ba2c5cae480c16a596ce7c3bf2d480becacf4
ToppCelldroplet-Marrow-nan-3m-Hematologic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CASP8AP2 PPP1R10 GRAMD2B BOD1L1 HDGFL3

3.60e-051829151710eab3037a87609d21838be2d2d29c3bc36651
ToppCelldroplet-Spleen-nan-18m|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PPP1R10 ZNF608 BAZ2B SRRM2 AFF4

3.60e-05182915eeb5dfa4539e9ca5220f26bc2b65717ddcf13b6c
ToppCelldroplet-Spleen-nan-18m-Lymphocytic|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PPP1R10 ZNF608 BAZ2B SRRM2 AFF4

3.69e-0518391528cbf909424f3be4491d49832f0aca0386560814
ToppCelldroplet-Spleen-nan-18m-Lymphocytic-nan|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PPP1R10 ZNF608 BAZ2B SRRM2 AFF4

3.69e-051839153fa608aa6b119869ec3280dc388dfee57160e63a
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

PPP1R10 ANKRD12 ZEB2 PRDM2 MAP3K2

4.20e-05188915ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCellhuman_hepatoblastoma-Tumor_cells|World / Sample and Cell Type and Tumor Cluster (all cells)

ARHGEF28 PHF3 ZNF638 SRRM2 AFF4

4.64e-05192915916fbec1c7ab7969bda711886ac88e877e30c280
ToppCellhuman_hepatoblastoma|World / Sample and Cell Type and Tumor Cluster (all cells)

ARHGEF28 PHF3 ZNF638 SRRM2 AFF4

4.76e-05193915e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCellCOVID-19_Mild|World / Disease condition and Cell class

CENPC XAF1 ANKRD12 SRRM2 ZEB2

4.76e-051939157256a5a491536c525b31ae96d47ab5c6303cb73a
ToppCelldroplet-Mammary_Gland-nan-3m-Epithelial-basal_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYL9 RRP1B RRP15 POLR1G SMTN

5.24e-0519791587d09f53b84af482116d3e2076eab1a9e555a2a6
ToppCelldroplet-Mammary_Gland-nan-3m-Epithelial-basal_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYL9 RRP1B RRP15 POLR1G SMTN

5.24e-051979155bf5187fcba4ccc3f83bc9e884e40ff344a3d109
ToppCell10x3'2.3-week_17-19-Lymphocytic_B|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

SRSF10 BBX IRAG2 ZEB2 PRDM2

5.37e-051989155f465cf5c7493e32d9afe9e9d05757d0a95acc33
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

SRSF10 BBX IRAG2 ZEB2 PRDM2

5.37e-0519891577ce3fe1ab161c0faf8987e73a64ab61294b9255
ToppCellSevere-B_intermediate-6|World / disease group and sub_cluster of B and Plasma cells(res = 0.5)

TET2 IRAG2 MOB1A DEK ZEB2

5.37e-051989158402421dc060926e968efe39a4e907f1e8ae5b1f
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M|organoid_Kanton_Nature / Sample Type, Dataset, Time_group, and Cell type.

APC BOD1L1 ANKRD12 ZNF302 ZEB2

5.50e-05199915b2d7dea11207cca63d688f8051143850b29dbdf0
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

MYL12A BAZ2B PHF3 BOD1L1 ANKRD12

5.50e-05199915fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCellSevere-B_intermediate-6|Severe / disease group and sub_cluster of B and Plasma cells(res = 0.5)

TET2 IRAG2 MOB1A DEK ZEB2

5.50e-05199915bf6ebb63ab361d9d1946225894d7be433e9befab
ToppCellCOVID-19-COVID-19_Mild|COVID-19 / Disease, condition lineage and cell class

BOD1L1 XAF1 ANKRD12 SRRM2 ZEB2

5.63e-0520091562c25042086f1afd1102e0720e933c2e476468fd
DrugCamptothecine (S,+) [7689-03-4]; Down 200; 11.4uM; PC3; HT_HG-U133A

WAPL PHF3 APC ISG20L2 ICE1 ANKRD12 FBXO34 PRDM2

5.83e-071809084541_DN
DrugClorgyline

CENPC BAZ2B PHF3 APC ZNF638 BOD1L1 ANKRD12

4.69e-06168907ctd:D003010
DrugGW8510; Down 200; 10uM; PC3; HT_HG-U133A

MSH6 WAPL FAM193A SFSWAP ZNF638 FBXO34 PRDM2

7.94e-061829077085_DN
DrugAlsterpaullone; Down 200; 10uM; MCF7; HT_HG-U133A

MSH6 WAPL HEATR6 BAZ2B ZNF302 TTK PRDM2

9.47e-061879077051_DN
DrugMS-275; Down 200; 10uM; PC3; HT_HG-U133A

MSH6 WAPL SFSWAP MOB1A PKNOX1 SIM2 SRRM2

1.02e-051899077074_DN
DrugAC1NSVQS

MYL12A MYL9 MYL12B

1.28e-0512903CID005317517
DrugMethacholine chloride [62-51-1]; Down 200; 20.4uM; MCF7; HT_HG-U133A

SASH1 BAZ2B PHF3 GRAMD2B ANKRD12 HDGFL3 SMTN

1.29e-051969076248_DN
DrugStreptomycin sulfate [3810-74-0]; Down 200; 2.8uM; MCF7; HT_HG-U133A

SASH1 RRP1B APC SRRM2 PQBP1 CIC MRTFA

1.33e-051979073195_DN
DrugSodium Fluoride

TET2 CASP8AP2 HAUS8 LIG3 TBATA ARHGEF28 ZNF608 PHF3 CSTL1 BOD1L1 TSEN54 TEX15 LMNTD1 SRSF12

1.70e-059339014ctd:D012969
DiseaseEye Abnormalities

TGFB2 APC IFT122

1.69e-0517883C0015393
DiseaseColorectal Carcinoma

TET2 MSH6 LIG3 TCOF1 APC PKNOX1 XAF1 PQBP1 ZEB2 SMTN

4.63e-057028810C0009402
DiseaseTurcot syndrome (disorder)

MSH6 APC

8.74e-055882C0265325
Diseaseovarian cancer (implicated_via_orthology)

MSH6 APC

2.43e-048882DOID:2394 (implicated_via_orthology)
DiseaseFEV/FEC ratio

TGFB2 PHF2 TET2 ARHGEF28 MYL9 BRDT ARHGEF18 TSEN54 SRFBP1 ZEB2 MRTFA SMTN

2.83e-0412288812EFO_0004713
DiseaseCongenital Heart Defects

TGFB2 ZEB2 AFF4

3.11e-0444883C0018798
DiseaseLynch Syndrome

MSH6 APC

3.12e-049882C4552100
DiseaseGlioma

APC XAF1 CIC

2.27e-0387883C0017638
Diseasebreast cancer (implicated_via_orthology)

MSH6 APC

2.52e-0325882DOID:1612 (implicated_via_orthology)
DiseaseHereditary Nonpolyposis Colorectal Neoplasms

MSH6 APC

2.73e-0326882C0009405
DiseaseBone Diseases, Developmental

TGFB2 AFF4

2.94e-0327882C0005941

Protein segments in the cluster

PeptideGeneStartEntry
KKSKSPSKRSKSQDQ

PRPF4B

221

Q13523
PSKRSKSQDQARKSK

PRPF4B

226

Q13523
SPTKNGSFKKKVSST

ARHGEF18

921

Q6ZSZ5
KSTPKKTCKKRQSSE

BBX

466

Q8WY36
VPSKQSGRSDKKKST

CXorf65

141

A6NEN9
RKRQTKSDKTQPSKA

BRDT

616

Q58F21
LSKQESFTSVKKPKR

BAZ2B

2046

Q9UIF8
SSLNVKTKKNAPSAT

FBXO34

81

Q9NWN3
QKKSAKERKPSTTSS

CCKAR

246

P32238
KTPSSSSRQKDKVNK

ANKRD12

166

Q6UB98
TLPIRNKAASKQKSS

ANKRD17

771

O75179
PKTESKSSKFKSNSD

CASP8AP2

296

Q9UKL3
TFRATPTSTAKQKQK

CACNB4

191

O00305
KQKLRQTSKASSEPA

FAM193A

1046

P78312
ATSTNKRTNLKKPNS

PPP1R13B

861

Q96KQ4
KNSSSTSKQKKTEGK

AFF4

856

Q9UHB7
TKTKTKKRPQRATSN

MYL12A

6

P19105
TSPRNKSKTKSKDAK

ARHGEF28

631

Q8N1W1
QQKKALSKTSKVRPS

ANAPC7

71

Q9UJX3
PEQKSVSKHKSSSKI

IFT122

121

Q9HBG6
GSIPSSSSKNEKKQK

MACO1

341

Q8N5G2
QKNKKPEKSSSSESS

GPATCH1

886

Q9BRR8
AKAKTTKKRPQRATS

MYL9

6

P24844
TSNSSCPLQSKKLRK

CSTL1

96

Q9H114
SLQETRKAKSSSPKK

MAP3K2

26

Q9Y2U5
RKAKSSSPKKQNDVR

MAP3K2

31

Q9Y2U5
SSASRPTLNKKKKSK

HEATR6

306

Q6AI08
SHPTRSQKKSSQKKS

ISG20L2

131

Q9H9L3
PNRASGSKKKKTSES

LMNTD1

371

Q8N9Z9
STKGKKRSQPATKTE

MED12

1786

Q93074
EAISSQESKKSKKRP

LRRC42

381

Q9Y546
NSATSSQSKKEKRKN

DNAJC21

516

Q5F1R6
STKKAEGKLSNSNSK

LIG3

876

P49916
KRKSSRKETPSATKQ

MSH6

311

P52701
PTNSSSAKKKDKRVQ

HAUS8

16

Q9BT25
TSKKSSKQSRKSPGD

HDGFL3

151

Q9Y3E1
EREAKKSAKKPQSSS

HDGFL2

406

Q7Z4V5
PNSVVTKSAKKLRSS

PQBP1

81

O60828
NAKTSERASKKLPSQ

BOD1L1

226

Q8NFC6
KDQSNKPVKTSASSR

ICE1

1561

Q9Y2F5
IPKSTRSKAKKSVSA

H1-6

116

P22492
TAKTNKRAKKPRATT

H1-6

146

P22492
SSKNTPDSKKISSRN

CENPC

126

Q03188
DSSTTKKNQNSSKKE

DEK

286

P35659
QIKKRSASLNSKPSS

IRAG2

356

Q12912
VDFNSKQKERKPKSS

KLB

481

Q86Z14
NDPKTERKKSSSSSQ

GRAMD2B

91

Q96HH9
PSSRGKSTVSLNKNK

C18orf63

526

Q68DL7
SKLDSKTKTSKKTPQ

MAP3K19

536

Q56UN5
NVKFAASVKSKKPSS

PRDM2

1556

Q13029
ASVKSKKPSSSSLRN

PRDM2

1561

Q13029
AKTKTTKKRPQRATS

MYL12B

6

O14950
KSKARSQSVSPSKQA

SFSWAP

861

Q12872
AVQLNKTPSSSKKVT

RRP1B

671

Q14684
ESSSSRSPTPKQKKK

SRRM2

176

Q9UQ35
KKKSAKRKLTPNTTS

PHF2

951

O75151
KRSSSSPRSINKKAK

TSEN54

201

Q7Z6J9
TKACPKKTNTTASAK

TCOF1

641

Q13428
AKKASTKDSESPSQK

TCOF1

1461

Q13428
CSETPKTKKKTAQNR

PKNOX1

326

P55347
SSRSSKTFKPKKNIP

MOB1A

6

Q9H8S9
TPGSTKKRKKQSQES

POLR1G

456

O15446
STSQETRKLVKPKNT

SIM2

361

Q14190
SSQNTEKKTSKPRAE

TBATA

336

Q96M53
KTKTNPFSSSTNKEK

SDAD1

631

Q9NVU7
SQPKSASEKSQRSKK

MRTFA

211

Q969V6
QKRSKSIGKSQSSSP

SRSF12

186

Q8WXF0
KSSRKAKKPAQTASK

APC

1586

P25054
NKDRKKSSSEAKPTS

CIC

271

Q96RK0
SGDQKTIKSTRKKNS

TGFB2

261

P61812
KSKSKETTATKNRVP

TOMM34

171

Q15785
TTRKIKSDSPKSAQK

SPO11

96

Q9Y5K1
KSNSRSRSKSQPKKE

SRSF10

176

O75494
SKSSRRNFKEQAPKT

SRFBP1

351

Q8NEF9
STSTQSRSKKPSKKP

YY2

131

O15391
SSSKKAPRSKNKTLD

XAF1

226

Q6GPH4
TRFRPSNTKSKKDVK

WAPL

411

Q7Z5K2
SNTKKASGKTVSTAK

PHF3

156

Q92576
QSKRFSEPQKLTTKK

SASH1

896

O94885
VERSNSSKSKAESPK

TCEA3

146

O75764
TNETASSRKKPKAKQ

RRP15

221

Q9Y3B9
NSEVEKKQKSPTKRT

WDR53

271

Q7Z5U6
SSKNLKPSSETKTQK

WASHC2A

521

Q641Q2
SRENGKSKSKISPKS

TTK

701

P33981
VKRSKTSKDANKSLP

ZNF608

106

Q9ULD9
SPKKSFKTRKQKSSS

ZNF800

336

Q2TB10
VPNTSSRKKNITSKT

PPIP5K2

1216

O43314
INKNISNSSKKRPST

TEX15

2301

Q9BXT5
KSKRQKKPRSSSLAS

TMC2

126

Q8TDI7
EPKSIIATKNKTKAS

ZEB2

826

O60315
SNKNEKEKSAPSRTK

TET2

1486

Q6N021
KEKSAPSRTKQTENA

TET2

1491

Q6N021
SQSSTQPAEKDKKKR

PPP1R10

146

Q96QC0
KAQSLPKTSASQARK

SMTN

751

P53814
NRTSRSQKKKSKSPE

SPATA6

181

Q9NWH7
KNPKSTTGRSSKSKE

ZNF638

1516

Q14966
NSTKETSKIQHKPKS

ZBBX

206

A8MT70
PNSTVEAFSRSKKKK

ZNF302

121

Q9NR11