Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
MousePheno	disorganized sperm mitochondrial sheath	DNAH10 ARMC12 CCDC159	1.80e-05	10	76	3	MP:0014468
Domain	ARM-type_fold	DOCK2 INTS7 ARMC12 CIP2A USP24 APOB XPO1 MEI1 PIK3C2B PDS5A	8.76e-06	339	95	10	IPR016024
Domain	-	NTRK2 STK11IP TLR8 LRRN3 SLITRK2 CEP78 NXF5 LMOD1 LGR6	3.76e-05	321	95	9	3.80.10.10
Domain	L_dom-like	NTRK2 STK11IP TLR8 LRRN3 SLITRK2 CEP78 NXF5 LMOD1 LGR6	4.45e-05	328	95	9	IPR032675
Domain	Leu-rich_rpt	NTRK2 STK11IP TLR8 LRRN3 SLITRK2 CEP78 NXF5 LGR6	7.24e-05	271	95	8	IPR001611
Domain	CHD_N	CHD3 CHD4	7.65e-05	3	95	2	IPR012958
Domain	CHD_C2	CHD3 CHD4	7.65e-05	3	95	2	IPR012957
Domain	CHDCT2	CHD3 CHD4	7.65e-05	3	95	2	PF08074
Domain	CHDNT	CHD3 CHD4	7.65e-05	3	95	2	PF08073
Domain	DUF1086	CHD3 CHD4	7.65e-05	3	95	2	IPR009462
Domain	DUF1087	CHD3 CHD4	7.65e-05	3	95	2	IPR009463
Domain	DUF1087	CHD3 CHD4	7.65e-05	3	95	2	PF06465
Domain	DUF1086	CHD3 CHD4	7.65e-05	3	95	2	PF06461
Domain	DUF1087	CHD3 CHD4	7.65e-05	3	95	2	SM01147
Domain	DUF1086	CHD3 CHD4	7.65e-05	3	95	2	SM01146
Domain	LRRNT	NTRK2 LRRN3 SLITRK2 LGR6	1.52e-04	53	95	4	PF01462
Domain	ARM-like	DOCK2 INTS7 ARMC12 CIP2A XPO1 MEI1 PDS5A	4.57e-04	270	95	7	IPR011989
Domain	LRR	STK11IP TLR8 LRRN3 SLITRK2 NXF5 LGR6	5.66e-04	201	95	6	PS51450
Domain	LRAT	LRATD1 LRATD2	7.03e-04	8	95	2	PF04970
Domain	LRAT-like_dom	LRATD1 LRATD2	7.03e-04	8	95	2	IPR007053
Domain	Cys-rich_flank_reg_C	NTRK2 TLR8 LRRN3 SLITRK2	1.15e-03	90	95	4	IPR000483
Domain	LRRCT	NTRK2 TLR8 LRRN3 SLITRK2	1.15e-03	90	95	4	SM00082
Domain	LRRNT	NTRK2 LRRN3 SLITRK2 LGR6	1.57e-03	98	95	4	IPR000372
Domain	LRRNT	NTRK2 LRRN3 SLITRK2 LGR6	1.57e-03	98	95	4	SM00013
Domain	LRR_8	NTRK2 TLR8 LRRN3 SLITRK2 LGR6	1.81e-03	171	95	5	PF13855
Domain	FN_type2_col-bd	MRC2 LY75	2.24e-03	14	95	2	IPR000562
Domain	FN2_2	MRC2 LY75	2.24e-03	14	95	2	PS51092
Domain	FN2_1	MRC2 LY75	2.24e-03	14	95	2	PS00023
Domain	fn2	MRC2 LY75	2.24e-03	14	95	2	PF00040
Domain	FN2	MRC2 LY75	2.24e-03	14	95	2	SM00059
Domain	Ubiquitin-rel_dom	USP24 PTPN3 PIK3C2B AFDN ASPSCR1	2.49e-03	184	95	5	IPR029071
Domain	-	PLXNB2 IQGAP3	2.93e-03	16	95	2	1.10.506.10
Domain	RasGAP_dom	PLXNB2 IQGAP3	3.71e-03	18	95	2	IPR001936
Pubmed	Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.	EXOSC10 CCDC30 KIF1B APOB CHD4 ANKRD50 PTPN3 SEC24D PDS5A AFDN DCLRE1A SCLT1 CLEC16A	2.93e-07	777	98	13	35844135
Pubmed	Molecular analysis of a major antigenic region of the 240-kD protein of Mi-2 autoantigen.	CHD3 CHD4	7.86e-06	2	98	2	7560064
Pubmed	The major dermatomyositis-specific Mi-2 autoantigen is a presumed helicase involved in transcriptional activation.	CHD3 CHD4	7.86e-06	2	98	2	7575689
Pubmed	CIP2A modulates cell-cycle progression in human cancer cells by regulating the stability and activity of Plk1.	CIP2A PLK1	7.86e-06	2	98	2	23983103
Pubmed	Delayed onset of inherited ALS by deletion of the BDNF receptor TrkB.T1 is non-cell autonomous.	MNX1 NTRK2	7.86e-06	2	98	2	33359475
Pubmed	MNX1 reduces sensitivity to anoikis by activating TrkB in human glioma cells.	MNX1 NTRK2	7.86e-06	2	98	2	30066929
Pubmed	SLITRK2 variants associated with neurodevelopmental disorders impair excitatory synaptic function and cognition in mice.	NTRK2 SLITRK2	7.86e-06	2	98	2	35840571
Pubmed	Mouse Chd4-NURD is required for neonatal spermatogonia survival and normal gonad development.	CHD3 CHD4	7.86e-06	2	98	2	35568926
Pubmed	Two forms of the major antigenic protein of the dermatomyositis-specific Mi-2 autoantigen.	CHD3 CHD4	7.86e-06	2	98	2	8843877
Pubmed	LMBR1L regulates lymphopoiesis through Wnt/β-catenin signaling.	INTS7 CIP2A AHCTF1 SLC43A1 USP24 URB2 XPO1 PLXNB2 RINT1 CEP78 PDS5A IQGAP3	1.40e-05	942	98	12	31073040
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	EXOSC10 AHCTF1 POLR2A USP24 CHD4 URB2 XPO1 MACF1 PDS5A AFDN	1.62e-05	653	98	10	22586326
Pubmed	In vitro nuclear interactome of the HIV-1 Tat protein.	AHCTF1 POLR2A CHD4 XPO1 PDS5A PLK1	1.97e-05	195	98	6	19454010
Pubmed	Plk1 regulates contraction of postmitotic smooth muscle cells and is required for vascular homeostasis.	POLR2A PLK1	2.35e-05	3	98	2	28692064
Pubmed	Sweat gland development requires an eccrine dermal niche and couples two epidermal programs.	LGR6 EN1	2.35e-05	3	98	2	38096824
Pubmed	Plexin-B2 controls the timing of differentiation and the motility of cerebellar granule neurons.	PLXNB2 EN1	2.35e-05	3	98	2	34100719
Pubmed	The chromatin-remodeling enzyme CHD3 plays a role in embryonic viability but is dispensable for early vascular development.	CHD3 CHD4	2.35e-05	3	98	2	32658897
Pubmed	BDNF: mRNA expression in urine cells of patients with chronic kidney disease and its role in kidney function.	NTRK2 HAVCR1	2.35e-05	3	98	2	30133147
Pubmed	New insights into the genetic basis of premature ovarian insufficiency: Novel causative variants and candidate genes revealed by genomic sequencing.	XPO1 MACF1	2.35e-05	3	98	2	33036707
Pubmed	RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.	POLR2A FNBP4 CHD3 CHD4 AFDN IQGAP3	2.41e-05	202	98	6	24639526
Pubmed	Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.	DOCK2 EXOSC10 USP24 CHD3 CHD4 TUBGCP4 BID MACF1 PLK1	4.06e-05	582	98	9	20467437
Pubmed	NAB2 represses transcription by interacting with the CHD4 subunit of the nucleosome remodeling and deacetylase (NuRD) complex.	CHD3 CHD4	4.70e-05	4	98	2	16574654
Pubmed	Characterization of the CHD family of proteins.	CHD3 CHD4	4.70e-05	4	98	2	9326634
Pubmed	Tyrosine kinase receptor B protects against coronary artery disease and promotes adult vasculature integrity by regulating Ets1-mediated VE-cadherin expression.	NTRK2 CDH5	4.70e-05	4	98	2	25633318
Pubmed	CIP2A acts as a scaffold for CEP192-mediated microtubule organizing center assembly by recruiting Plk1 and aurora A during meiotic maturation.	CIP2A PLK1	4.70e-05	4	98	2	28935709
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	TRERF1 POLR2A KIF1B USP24 FNBP4 CHD3 CHD4 XPO1 TLE3 AFDN	6.76e-05	774	98	10	15302935
Pubmed	FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.	EXOSC10 CHD3 CHD4 URB2 XPO1 TLE3	7.53e-05	248	98	6	27926873
Pubmed	Protocadherin 12 (VE-cadherin 2) is expressed in endothelial, trophoblast, and mesangial cells.	PCDH12 CDH5	7.82e-05	5	98	2	15541725
Pubmed	KIT Is Required for Fetal Liver Hematopoiesis.	CSF1R CDH5	7.82e-05	5	98	2	34395414
Pubmed	Embryonic forebrain transcriptome of mice with polyalanine expansion mutations in the ARX homeobox gene.	ZBTB20 PITX2 TENM1	9.21e-05	31	98	3	27798109
Pubmed	Prdm12 Directs Nociceptive Sensory Neuron Development by Regulating the Expression of the NGF Receptor TrkA.	ZBTB20 NTRK2 EN1	1.11e-04	33	98	3	30917309
Pubmed	The Cell Adhesion Molecule Necl-4/CADM4 Serves as a Novel Regulator for Contact Inhibition of Cell Movement and Proliferation.	AFDN CDH5	1.17e-04	6	98	2	25893857
Pubmed	Chromatin remodeling proteins interact with pericentrin to regulate centrosome integrity.	CHD3 CHD4	1.17e-04	6	98	2	17626165
Pubmed	The SOX2-interactome in brain cancer cells identifies the requirement of MSI2 and USP9X for the growth of brain tumor cells.	TRERF1 INTS7 USP24 CHD3 MACF1 IQGAP3	1.52e-04	282	98	6	23667531
Pubmed	The Spt6 SH2 domain binds Ser2-P RNAPII to direct Iws1-dependent mRNA splicing and export.	EXOSC10 POLR2A	1.64e-04	7	98	2	17234882
Pubmed	The murine Ten-m/Odz genes show distinct but overlapping expression patterns during development and in adult brain.	TENM1 EN1	1.64e-04	7	98	2	12915301
Pubmed	BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.	CIP2A AHCTF1 KIF1B USP24 XPO1 ANKRD50 MACF1 PDS5A AFDN	1.79e-04	708	98	9	39231216
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	TRERF1 CIP2A USP24 CHD3 CHD4 GREB1L TLE3	1.86e-04	418	98	7	34709266
Pubmed	R-spondins/Lgrs expression in tooth development.	PITX2 LGR6	2.18e-04	8	98	2	24616052
Pubmed	Mammalian chromodomain proteins: their role in genome organisation and expression.	CHD3 CHD4	2.18e-04	8	98	2	10655032
Pubmed	Genome-wide association study of bipolar disorder in European American and African American individuals.	NTRK2 SLITRK2	2.18e-04	8	98	2	19488044
Pubmed	SEC24A deficiency lowers plasma cholesterol through reduced PCSK9 secretion.	APOB SEC24D	2.18e-04	8	98	2	23580231
Pubmed	Diverse alternative back-splicing and alternative splicing landscape of circular RNAs.	POLR2A XPO1	2.18e-04	8	98	2	27365365
Pubmed	Cyclin D1 promotes neurogenesis in the developing spinal cord in a cell cycle-independent manner.	MNX1 EN1	2.18e-04	8	98	2	21709239
Pubmed	Understanding the Significance of the Hypothalamic Nature of the Subthalamic Nucleus.	PITX2 EN1	2.18e-04	8	98	2	34518367
Pubmed	An Adaptor Molecule Afadin Regulates Lymphangiogenesis by Modulating RhoA Activity in the Developing Mouse Embryo.	AFDN CDH5	2.18e-04	8	98	2	23840823
Pubmed	TRPV2 enhances axon outgrowth through its activation by membrane stretch in developing sensory and motor neurons.	MNX1 EN1	2.79e-04	9	98	2	20357111
Pubmed	Active suppression of interneuron programs within developing motor neurons revealed by analysis of homeodomain factor HB9.	MNX1 EN1	2.79e-04	9	98	2	10482235
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	EXOSC10 CHD3 CHD4 URB2 XPO1 CEP78 MACF1 PLK1 IQGAP3	2.99e-04	759	98	9	35915203
Pubmed	The sequence of the human genome.	DNAH10 TSHZ2 BTBD18 USP24 ARMCX4 CCDC159 EYS ECE2	3.12e-04	603	98	8	11181995
Pubmed	Large-scale identification of c-MYC-associated proteins using a combined TAP/MudPIT approach.	POLR2A CHD4 XPO1 PLK1 IQGAP3	3.37e-04	211	98	5	17314511
Pubmed	V1 spinal neurons regulate the speed of vertebrate locomotor outputs.	MNX1 EN1	3.48e-04	10	98	2	16525473
Pubmed	Stringent specificity in the construction of a GABAergic presynaptic inhibitory circuit.	NTRK2 EN1	3.48e-04	10	98	2	19804761
Pubmed	Sororin mediates sister chromatid cohesion by antagonizing Wapl.	PDS5A PLK1	3.48e-04	10	98	2	21111234
Pubmed	A genome-wide RNAi screen identifies multiple synthetic lethal interactions with the Ras oncogene.	EXOSC10 XPO1 TUBGCP4 SLITRK2 PLK1 CDH5	3.59e-04	331	98	6	19490893
Pubmed	The RNA binding protein MEX3A promotes tumor progression of breast cancer by post-transcriptional regulation of IGFBP4.	AHCTF1 CHD3 CHD4 URB2 EYS MACF1	3.64e-04	332	98	6	37433992
Pubmed	Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.	EXOSC10 POLR2A CHD3 CHD4 XPO1 PDS5A	3.64e-04	332	98	6	32786267
Pubmed	Cdk5 selectively affects the migration of different populations of neurons in the developing spinal cord.	MNX1 EN1	4.25e-04	11	98	2	17492640
Pubmed	Pitx3 and En1 determine the size and molecular programming of the dopaminergic neuronal pool.	TLE3 EN1	4.25e-04	11	98	2	28800615
Pubmed	The NuRD chromatin-remodeling enzyme CHD4 promotes embryonic vascular integrity by transcriptionally regulating extracellular matrix proteolysis.	CHD4 CDH5	4.25e-04	11	98	2	24348274
Pubmed	Ikaros DNA-binding proteins direct formation of chromatin remodeling complexes in lymphocytes.	CHD3 CHD4	4.25e-04	11	98	2	10204490
Pubmed	Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins.	NTRK2 LRRN3 SLITRK2	4.34e-04	52	98	3	24613359
Pubmed	The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.	EXOSC10 COG7 CIP2A POLR2A USP24 CHD4 XPO1 PDS5A	4.54e-04	638	98	8	33239621
Pubmed	NURD, a novel complex with both ATP-dependent chromatin-remodeling and histone deacetylase activities.	CHD3 CHD4	5.09e-04	12	98	2	9885572
Pubmed	Genetic and physical mapping of the biglycan gene on the mouse X chromosome.	IDS F8	5.09e-04	12	98	2	8093671
Pubmed	Foxn4 acts synergistically with Mash1 to specify subtype identity of V2 interneurons in the spinal cord.	MNX1 EN1	5.09e-04	12	98	2	16020526
Pubmed	Afadin Signaling at the Spinal Neuroepithelium Regulates Central Canal Formation and Gait Selection.	MNX1 AFDN	5.09e-04	12	98	2	32521266
Pubmed	NuRD suppresses pluripotency gene expression to promote transcriptional heterogeneity and lineage commitment.	CHD3 CHD4	5.09e-04	12	98	2	22560079
Pubmed	IQGAP3 regulates cell proliferation through the Ras/ERK signalling cascade.	AFDN IQGAP3	5.09e-04	12	98	2	18604197
Pubmed	ZC4H2 stabilizes RNF220 to pattern ventral spinal cord through modulating Shh/Gli signaling.	MNX1 EN1	5.09e-04	12	98	2	31336385
Pubmed	Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.	CHD3 TUBGCP4 ANKRD50 RINT1 CEP78 AFDN CLEC16A IQGAP3	5.13e-04	650	98	8	38777146
Pubmed	FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.	POLR2A FNBP4 SPG11 XPO1 MEI1 PIK3C2B PLK1	5.27e-04	497	98	7	36774506
Pubmed	Jade-1S phosphorylation induced by CK1α contributes to cell cycle progression.	CHD3 CHD4 PLK1	5.40e-04	56	98	3	26919559
Pubmed	Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry.	DOCK2 POLR2A USP24 AFDN	5.59e-04	133	98	4	15144186
Pubmed	Polo-like kinase 1 regulates Nlp, a centrosome protein involved in microtubule nucleation.	TUBGCP4 CEP78 PLK1	5.98e-04	58	98	3	12852856
Pubmed	LSD1 is a subunit of the NuRD complex and targets the metastasis programs in breast cancer.	CHD3 CHD4	6.01e-04	13	98	2	19703393
Pubmed	Growth and pattern of the mammalian neural tube are governed by partially overlapping feedback activities of the hedgehog antagonists patched 1 and Hhip1.	MNX1 EN1	6.01e-04	13	98	2	15576403
Pubmed	Ftm is a novel basal body protein of cilia involved in Shh signalling.	MNX1 PITX2	6.01e-04	13	98	2	17553904
Pubmed	V1 and v2b interneurons secure the alternating flexor-extensor motor activity mice require for limbed locomotion.	MNX1 EN1	6.01e-04	13	98	2	24698273
Pubmed	The structural biology of HIV-1: mechanistic and therapeutic insights.	POLR2A XPO1	6.01e-04	13	98	2	22421880
Pubmed	Renshaw cell interneuron specialization is controlled by a temporally restricted transcription factor program.	MNX1 EN1	6.01e-04	13	98	2	22115757
Pubmed	Degradation of histone mRNA requires oligouridylation followed by decapping and simultaneous degradation of the mRNA both 5' to 3' and 3' to 5'.	EXOSC10 LSM1	6.01e-04	13	98	2	18172165
Pubmed	The intracellular domain of teneurin-1 induces the activity of microphthalmia-associated transcription factor (MITF) by binding to transcriptional repressor HINT1.	TENM1 MACF1	6.01e-04	13	98	2	25648896
Pubmed	Using an in situ proximity ligation assay to systematically profile endogenous protein-protein interactions in a pathway network.	DOCK2 NTRK2 F8 BID CSF1R PITX2	6.53e-04	371	98	6	25241761
Pubmed	Optimizing Nervous System-Specific Gene Targeting with Cre Driver Lines: Prevalence of Germline Recombination and Influencing Factors.	CACNA1A CSF1R EN1	6.61e-04	60	98	3	32027825
Pubmed	AUTS2 Governs Cerebellar Development, Purkinje Cell Maturation, Motor Function and Social Communication.	CACNA1A EN1	7.00e-04	14	98	2	33305180
Pubmed	The chromatin remodeler Mi-2beta is required for establishment of the basal epidermis and normal differentiation of its progeny.	CHD3 CHD4	7.00e-04	14	98	2	17360773
Pubmed	MBD2/NuRD and MBD3/NuRD, two distinct complexes with different biochemical and functional properties.	CHD3 CHD4	7.00e-04	14	98	2	16428440
Pubmed	Fli-1 is required for murine vascular and megakaryocytic development and is hemizygously deleted in patients with thrombocytopenia.	CSF1R CDH5	7.00e-04	14	98	2	10981960
Pubmed	Notch and MAML signaling drives Scl-dependent interneuron diversity in the spinal cord.	MNX1 EN1	7.00e-04	14	98	2	17359917
Pubmed	Erythro-myeloid progenitors contribute endothelial cells to blood vessels.	CSF1R CDH5	7.00e-04	14	98	2	30258231
Pubmed	NuRD-ZNF827 recruitment to telomeres creates a molecular scaffold for homologous recombination.	CHD3 CHD4	7.00e-04	14	98	2	25150861
Pubmed	Detailed expression pattern of Foxp1 and its possible roles in neurons of the spinal cord during embryogenesis.	MNX1 EN1	7.00e-04	14	98	2	19797899
Pubmed	Loss of motoneuron-specific microRNA-218 causes systemic neuromuscular failure.	MNX1 EN1	7.00e-04	14	98	2	26680198
Pubmed	Islet-to-LMO stoichiometries control the function of transcription complexes that specify motor neuron and V2a interneuron identity.	MNX1 EN1	7.00e-04	14	98	2	19666821
Pubmed	Human cytomegalovirus UL29/28 protein interacts with components of the NuRD complex which promote accumulation of immediate-early RNA.	CHD3 CHD4	7.00e-04	14	98	2	20585571
Pubmed	Novel asymmetrically localizing components of human centrosomes identified by complementary proteomics methods.	TUBGCP4 CEP78 SCLT1 PLK1	7.93e-04	146	98	4	21399614
Pubmed	Molecular cloning of murine STAP-1, the stem-cell-specific adaptor protein containing PH and SH2 domains.	CSF1R PLK1	8.06e-04	15	98	2	10679268
Pubmed	Essential role for ligand-dependent feedback antagonism of vertebrate hedgehog signaling by PTCH1, PTCH2 and HHIP1 during neural patterning.	MNX1 EN1	8.06e-04	15	98	2	23900540
Pubmed	Characterization of the Gbx1-/- mouse mutant: a requirement for Gbx1 in normal locomotion and sensorimotor circuit development.	MNX1 EN1	8.06e-04	15	98	2	23418536
Pubmed	DLX1 and the NuRD complex cooperate in enhancer decommissioning and transcriptional repression.	CHD3 CHD4	8.06e-04	15	98	2	35695185
GeneFamily	C-type lectin domain family	MRC2 LY75 CLEC16A	5.86e-04	47	63	3	494
GeneFamily	PHD finger proteins\|NuRD complex	CHD3 CHD4	7.71e-04	12	63	2	1305
GeneFamily	ADAM metallopeptidase domain containing\|CD molecules	TLR8 HAVCR1 CSF1R MRC2 LY75 CDH5	2.46e-03	394	63	6	471
ToppCell	severe-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	TSHZ2 USP24 CHD3 CEP78 TENM1 MACF1 GARIN1B	2.74e-07	197	98	7	57ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCell	Control-Control-Lymphocyte-T/NK-CD4+_T_activated\|Control / Disease, condition lineage and cell class	DDX60 ZNF343 CHD3 LRRN3 MRC2 MACF1 PLK1	2.83e-07	198	98	7	ee71543559836fd59adc0da877b2ca538cba60cb
ToppCell	PND10-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_mature\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NTRK2 F8 AFDN NINJ2 CDH5 IQGAP3	1.65e-06	163	98	6	3efbbdc9cb2613bb76d8c2f07cd4ec1a2c51a622
ToppCell	droplet-Kidney-nan-18m-Epithelial-Pecam____kidney_capillary_endothelial_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CACNA1A TSHZ2 NTRK2 PCDH12 F8 MRC2	2.03e-06	169	98	6	87116c33c5ca8cb1862e103e5607b1df4d264569
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	TSHZ2 ABCA13 GREB1L MRC2 PLEKHH2 SCARA3	3.02e-06	181	98	6	6a6bd8e020cb0929b6ecdcb55d467ad24fecfaf0
ToppCell	kidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	TSHZ2 ABCA13 MRC2 LRATD2 PLEKHH2 SCARA3	3.65e-06	187	98	6	9225caf66e06ebe57e90d677122acb6498607f36
ToppCell	10x_3'_v2v3-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia_independent-F\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ZBTB20 TSHZ2 PLXNB2 MRC2 TENM1 CDH5	4.78e-06	196	98	6	b8b9801181d7604871b48aebacb295d0a57a5eaf
ToppCell	Control_saline\|World / Treatment groups by lineage, cell group, cell type	ANKRD50 PCDH12 SLITRK2 HSBP1L1 MACF1 CDH5	5.21e-06	199	98	6	11c9c1779caceb725ecccf3f23b7d4e6dbd1af64
ToppCell	control\|World / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	TSHZ2 ABCA13 LRATD1 PLXNB2 PTPN3 AFDN	5.36e-06	200	98	6	97f36d2c197e03d93a1fc59949d77ae90f6e6a9a
ToppCell	NS-control\|NS / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	TSHZ2 ABCA13 LRATD1 PLXNB2 PTPN3 AFDN	5.36e-06	200	98	6	ecbe89ff95d046155b984c8c150e0b9e7278f839
ToppCell	RV-13._Vascular_Smooth_Muscle\|World / Chamber and Cluster_Paper	CACNA1A NTRK2 LMOD1 LGR6 SCARA3	2.78e-05	160	98	5	29c9b4770d0e73d59cffc7937b179484c76b6dcc
ToppCell	RV-13._Vascular_Smooth_Muscle\|RV / Chamber and Cluster_Paper	CACNA1A NTRK2 LMOD1 LGR6 SCARA3	2.86e-05	161	98	5	47b3b7662cbb671ccc086dc0a0cabd65f63eb5a1
ToppCell	facs-Lung-24m-Endothelial-capillary_endothelial-capillary_endothelial_cell-capillary_type_1_endothelial_cell\|24m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	DNAH10 ABCA13 CIP2A TENM1 LGR6	2.95e-05	162	98	5	bf886e22ff2a20353499004b53f25fb9e6574896
ToppCell	Children_(3_yrs)-Mesenchymal-myofibroblast_cell-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	SYCP2L MNX1 TSHZ2 LMOD1 PLEKHH2	3.31e-05	166	98	5	94636dbc039f794c735960c3425e00bdd5523602
ToppCell	Endothelial-B-Cryobiopsy_01\|World / lung cells shred on cell class, cell subclass, sample id	TSHZ2 LRATD1 PCDH12 CDH5 SCARA3	3.61e-05	169	98	5	95c617143e1fbdd1d55a93ffdcc210e0be37cf2f
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-proliferative_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 SEC24D MRC2 LMOD1	3.61e-05	169	98	5	a84490724a206c9bbb145f7ce08613f91d100ac4
ToppCell	droplet-Marrow-nan-3m-Lymphocytic-NK_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ABCA13 DDX60 CSF1R PIK3C2B TLE3	4.26e-05	175	98	5	cf53a15bfb37b6019e7052ffdf594a9ac040900e
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	ABCA13 GREB1L HAVCR1 MRC2 PLEKHH2	4.26e-05	175	98	5	284fdc7a9d303636a637041846850d19d114861a
ToppCell	Somatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT_L6_FEZF2\|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	CHD3 SEC24D TENM1 LGR6 SCARA3	4.38e-05	176	98	5	72a2a01618ce836bc843395d5095e9090759b4a6
ToppCell	Somatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT_L6_FEZF2-Exc_L6_FEZF2_FAM95C\|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	CHD3 SEC24D TENM1 LGR6 SCARA3	4.62e-05	178	98	5	431e7557b8e8764e16e9e48368ce6bfa3c61561a
ToppCell	Somatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_5-Exc_L4-5_RORB_LINC01474\|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	SLC22A25 TSHZ2 TDRD1 PTPN3 SCARA3	4.62e-05	178	98	5	5522b179c2e7dd707de01e2df10556349d0382a6
ToppCell	droplet-Liver-LIVER_HEP-30m\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	TSHZ2 PCDH12 F8 PIK3C2B MACF1	4.87e-05	180	98	5	dd1b10c7f5a0fbc63163844ca1882884a24a84d3
ToppCell	368C-Endothelial_cells-Endothelial-E\|368C / Donor, Lineage, Cell class and subclass (all cells)	NTRK2 LRATD1 PCDH12 F8 CDH5	4.87e-05	180	98	5	8ab16a0b9053bffc07b569a4f9e71749f56dde7e
ToppCell	droplet-Liver-LIVER_HEP\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	TSHZ2 PCDH12 F8 PIK3C2B MACF1	4.87e-05	180	98	5	423454e3390080ae03bb3cbb267255ebfe4df080
ToppCell	368C-Endothelial_cells-Endothelial-E-\|368C / Donor, Lineage, Cell class and subclass (all cells)	NTRK2 LRATD1 PCDH12 F8 CDH5	4.87e-05	180	98	5	394cd465b88429b70eebb2957480dffcbc51cfe7
ToppCell	5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.2\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	APOB LMOD1 LGR6 PLEKHH2 SCARA3	5.00e-05	181	98	5	b116c68393d8836bac080f81a8fcbeb52e0403e7
ToppCell	facs-Lung-Endomucin_-18m-Endothelial-Artery_endothelial_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CIP2A ARMCX4 CCDC159 PIK3C2B SCLT1	5.00e-05	181	98	5	4ea02344e1996f264dd5e14f3b19c8782ce41699
ToppCell	droplet-Marrow-nan-3m-Hematologic-nan\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHD3 CHD4 MACF1 PDS5A LY75	5.13e-05	182	98	5	e78ba2c5cae480c16a596ce7c3bf2d480becacf4
ToppCell	droplet-Marrow-nan-3m-Hematologic\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CHD3 CHD4 MACF1 PDS5A LY75	5.13e-05	182	98	5	1710eab3037a87609d21838be2d2d29c3bc36651
ToppCell	Somatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_5\|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	SLC22A25 TSHZ2 TDRD1 LRRN3 SCARA3	5.27e-05	183	98	5	274076a0978bce2bd53a1732045f18ef0f2d9985
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	TSHZ2 ABCA13 MRC2 PLEKHH2 SCARA3	5.27e-05	183	98	5	cfae90c309622b5d499e62a3a8a8b9746478d28d
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DNAH10 ABCA13 APOB SLITRK2 TENM1	5.41e-05	184	98	5	2cbed6462fea2622871bb7e49b0df3d984239281
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DNAH10 ABCA13 APOB SLITRK2 TENM1	5.41e-05	184	98	5	ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCell	RSV-Healthy-5\|Healthy / Virus stimulation, Condition and Cluster	DDX60 NTRK2 LRRN3 LRATD2 NINJ2	5.41e-05	184	98	5	1e282d619ef8035437fabe0fd2aefda1c142f7f6
ToppCell	facs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)\|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DNAH10 ABCA13 APOB SLITRK2 TENM1	5.41e-05	184	98	5	2b19a8c5f823e00812908b23e66bb4e563278aff
ToppCell	RSV-Healthy-5\|RSV / Virus stimulation, Condition and Cluster	DDX60 NTRK2 LRRN3 LRATD2 NINJ2	5.41e-05	184	98	5	ba958f731de6c9eff60103d483e020e2c0c7af7c
ToppCell	PND10-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_G2M\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CIP2A LMOD1 PLK1 SCARA3 IQGAP3	5.41e-05	184	98	5	d1e0e3b0eed2db8a5b7e3d6f81294667e4ba64e5
ToppCell	cellseq-Epithelial-Epithelial_Glandular-MEC-MEC\|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	TSHZ2 NTRK2 LMOD1 LGR6 SCARA3	5.55e-05	185	98	5	76304829fcfb5934188933ca20d33bc8c8b0dc91
ToppCell	cellseq-Epithelial-Epithelial_Glandular-MEC\|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	TSHZ2 NTRK2 LMOD1 LGR6 SCARA3	5.55e-05	185	98	5	0595e7ab37eed690f6e3d16a9a4e9a4bce2b89db
ToppCell	368C-Epithelial_cells-Epithelial-G_(Club-Clara_cells)-\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	CYP2B6 URB2 CCDC159 ZNF528 PLEKHH2	5.69e-05	186	98	5	77bebf576eb9b96ecb4fefb8a82a31aaaa917fc0
ToppCell	368C-Epithelial_cells-Epithelial-G_(Club-Clara_cells)\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	CYP2B6 URB2 CCDC159 ZNF528 PLEKHH2	5.69e-05	186	98	5	13bc41c60fd628af31899a5e8b480e06cc4781be
ToppCell	LPS-IL1RA+antiTNF-Endothelial-Endothelial-Activated_Alv_Cap\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	DDX60 NTRK2 PCDH12 PIK3C2B CDH5	5.84e-05	187	98	5	f3397dbc23b6c2f24e2c1ba887d8f9aef3ee01a1
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Immune-Myeloid-Macrophage_Dendritic-Cycling_Mononuclear_Phagocyte\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	DOCK2 CIP2A CSF1R PLK1 IQGAP3	5.84e-05	187	98	5	73931a5ea73799095daff100b5f18853c57c74dc
ToppCell	Endothelial-endothelial_cell_of_lymph_vessel\|World / Lineage, Cell type, age group and donor	TSHZ2 LRATD1 F8 PTPN3 CDH5	5.99e-05	188	98	5	80910dcbb51990f2baed240f319456c0d3fa2065
ToppCell	Children_(3_yrs)-Endothelial-endothelial_cell_of_lymph_vessel\|Children_(3_yrs) / Lineage, Cell type, age group and donor	TSHZ2 LRATD1 F8 PTPN3 CDH5	5.99e-05	188	98	5	c2805232618a7b6f844d34e37ad458a9923dbfe1
ToppCell	ASK428-Endothelial-Lymphatic\|ASK428 / Donor, Lineage and Cell class of Lung cells from Dropseq	TSHZ2 LRATD1 PCDH12 F8 CDH5	5.99e-05	188	98	5	c371bc340966cfe9205cbf4b62c6452f49f2559f
ToppCell	kidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	TSHZ2 ABCA13 MRC2 PLEKHH2 SCARA3	6.30e-05	190	98	5	b855b8b7d3439023390ca44629c1a99f5d4c6801
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	TSHZ2 ADGRG4 GREB1L MRC2 LMOD1	6.30e-05	190	98	5	efb757f11c2809e66ddb48a5c84f5433f111cb7c
ToppCell	LPS_only-Endothelial-Endothelial-Alv_Cap\|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 PCDH12 PIK3C2B AFDN CDH5	6.30e-05	190	98	5	474cbbab8f3b0a6881fa6c92edb78e43999f9ab0
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 MRC2 LMOD1 LGR6	6.30e-05	190	98	5	70c86dd454afb21d4a85db56c5f369d4b342bc97
ToppCell	kidney_cells-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	TSHZ2 ABCA13 NTRK2 MRC2 LRATD2	6.30e-05	190	98	5	a5db902ad112a0c0a0a7f1a2e38718bb3bd11412
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast-\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 SEC24D MRC2 LMOD1	6.45e-05	191	98	5	107113b930d9ad171f1b2aa20df4567c94fae7d8
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Myofibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 SEC24D MRC2 LMOD1	6.45e-05	191	98	5	bc353a79a1d11ca52bba5e3874a80d432e1a7715
ToppCell	LPS-antiTNF-Endothelial-Endothelial-Activated_Alv_Cap\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	DDX60 NTRK2 PCDH12 AFDN CDH5	6.61e-05	192	98	5	c618ede75dce3988c87a5b8f98d8e94e1dd66efd
ToppCell	LPS-IL1RA+antiTNF-Endothelial\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 PCDH12 PIK3C2B AFDN CDH5	6.61e-05	192	98	5	04f5a2e3dd6beff027b89d66eefdd92036e041af
ToppCell	LPS-IL1RA+antiTNF-Endothelial-Endothelial\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 PCDH12 PIK3C2B AFDN CDH5	6.61e-05	192	98	5	c07d7b40b2aa4eb27ac85801c014a656e2fd01dc
ToppCell	LAM-Endothelial-LymEndo\|LAM / Condition, Lineage and Cell class	TSHZ2 LRATD1 PCDH12 F8 CDH5	6.78e-05	193	98	5	68eadc91c2d89edd2412e86dfe134dd7c0ef6ee9
ToppCell	LPS-antiTNF-Endothelial-Endothelial\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 PCDH12 PIK3C2B AFDN CDH5	6.78e-05	193	98	5	02f633b016ab19bfa65bfd0cf32f000549a62148
ToppCell	severe-low-quality_cells\|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	TSHZ2 USP24 CEP78 MACF1 GARIN1B	6.78e-05	193	98	5	9337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCell	LPS-antiTNF-Endothelial\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 PCDH12 PIK3C2B AFDN CDH5	6.78e-05	193	98	5	5122b1ffba42de190061be34ecdc6176f84e56a3
ToppCell	LPS-IL1RA-Endothelial-Endothelial-Activated_Alv_Cap\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 ANKRD50 PCDH12 AFDN CDH5	6.78e-05	193	98	5	a3636c35ed25aabe2f1aba016c9fe125327bbfaf
ToppCell	LPS-IL1RA-Endothelial\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 PCDH12 PIK3C2B AFDN CDH5	6.95e-05	194	98	5	43f92b0533e26633dc94cce554045d641ef8fd76
ToppCell	LPS-IL1RA-Endothelial-Endothelial\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NTRK2 PCDH12 PIK3C2B AFDN CDH5	6.95e-05	194	98	5	1d39d968730a7e85b6161c1c8a6bd38afe9bcad7
ToppCell	COVID-19-kidney-PLVAP+EC\|kidney / Disease (COVID-19 only), tissue and cell type	SYCP2L PCDH12 F8 MACF1 CDH5	7.12e-05	195	98	5	a436483fec137584611f86b7a498a4dc2aa19cd3
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast-\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 SEC24D MRC2 LMOD1	7.12e-05	195	98	5	cad6563cc51d212554152c727fc2c249c6a07e4d
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 SEC24D MRC2 LMOD1	7.12e-05	195	98	5	783bfa8110161cbd6def50ce849cae676c39c458
ToppCell	Bronchial-NucSeq-Stromal-Fibroblastic-Fibro_myofibroblast\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TSHZ2 ZNF880 LMOD1 LGR6 PLEKHH2	7.12e-05	195	98	5	f5e91ce20a7ce528dc4c1a968c7bf096bf45c528
ToppCell	PND10-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CIP2A ARMCX4 PLK1 CDH5 IQGAP3	7.29e-05	196	98	5	20383d576708b7e4bfce3e9fe40548cce496e3cb
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast-\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 SEC24D MRC2 LMOD1	7.29e-05	196	98	5	3a6c942e2907aa07b5e12dbf9019d18f7bfca507
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Fibroblast-Collagen+matrisome-high_fibroblast\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	TRERF1 TSHZ2 SEC24D MRC2 LMOD1	7.29e-05	196	98	5	bba88e91cd3e3a6f5a9b443e3a4da33c5b455e70
ToppCell	PND10-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CIP2A ARMCX4 PLK1 CDH5 IQGAP3	7.29e-05	196	98	5	0644bd14a944b9c9759a295dfdd5e67a4775f20a
ToppCell	LPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-Activated_MatrixFB\|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type	SLC43A1 MRC2 MACF1 PLEKHH2 SCARA3	7.47e-05	197	98	5	fdb92985f7df0c280b87d3e43c2394e70786a2c7
ToppCell	Bronchial-NucSeq-Epithelial-Epi_airway_basal-Basal\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TSHZ2 ABCA13 PTPN3 LGR6 SCARA3	7.47e-05	197	98	5	1e915957ea6a4550ecb9d6ee4b232aa5800faf20
ToppCell	PND07-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CIP2A ARMCX4 PLK1 CDH5 IQGAP3	7.47e-05	197	98	5	1c89d6836eed30c50c765f7dde9cc8ee15c363d2
ToppCell	facs-Trachea-nan-3m-Mesenchymal-fibroblast\|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZBTB20 NTRK2 SEC24D MRC2 SCARA3	7.65e-05	198	98	5	0dc7d59a07428a7b7e8bdc81f0e2417dd4ce3cf2
ToppCell	Parenchymal-NucSeq-Endothelial-Endothelia_vascular-VE_capillary\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	SYCP2L NTRK2 LRATD1 F8 CDH5	7.65e-05	198	98	5	1d30a1f73b6d6d838f49751402a29c5ef54aa81f
ToppCell	mild-low-quality_cells\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	ZBTB20 USP24 CEP78 TENM1 MACF1	7.83e-05	199	98	5	f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCell	18-Airway-Mesenchymal-Mesenchyme_RSPO2+\|Airway / Age, Tissue, Lineage and Cell class	CIP2A MACF1 PLEKHH2 PLK1 IQGAP3	7.83e-05	199	98	5	7ac35e8f45dcdc702422dabd8f3e4d03e2bf61af
ToppCell	NS-critical-d_07-13-Epithelial\|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	ABCA13 PLXNB2 PTPN3 HSBP1L1 AFDN	7.83e-05	199	98	5	b88a81cd2a89f4d27100c96ae4324dcee68daf83
ToppCell	TCGA-Stomach-Primary_Tumor\|TCGA-Stomach / Sample_Type by Project: Shred V9	CIP2A URB2 XPO1 PLK1 IQGAP3	7.83e-05	199	98	5	38f1f612b29feb868322999ceeda78e52447ec4f
ToppCell	Parenchymal-NucSeq-Immune_Myeloid-Monocytic-Monocyte_CD16\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	DOCK2 TLR8 BID CSF1R SCLT1	7.83e-05	199	98	5	ac866ae110967c5867ff4601939b79861d43df54
ToppCell	TCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma\|TCGA-Stomach / Sample_Type by Project: Shred V9	CIP2A URB2 XPO1 PLK1 IQGAP3	7.83e-05	199	98	5	b10698aee2e6c17bc559eb4f723024141f914b90
ToppCell	control-Epithelial\|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	TSHZ2 ABCA13 PLXNB2 PTPN3 AFDN	8.02e-05	200	98	5	f95bbb94e51ac28b1995026c599ec3a34e012916
ToppCell	NS-control-d_0-4-Epithelial\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	TSHZ2 ABCA13 PLXNB2 PTPN3 AFDN	8.02e-05	200	98	5	d014959891893b6d3854a471fba1dc50c6625a0a
ToppCell	Control-Control-Lymphocyte-T/NK-dn_T\|Control / Disease, condition lineage and cell class	USP24 CHD3 CHD4 LRATD2 DCLRE1A	8.02e-05	200	98	5	10882c59b7aaf8bd4b5c00aa4ddbb9f7ac5b2cf5
ToppCell	LPS_only-Endothelial\|LPS_only / Treatment groups by lineage, cell group, cell type	PCDH12 PIK3C2B MACF1 AFDN CDH5	8.02e-05	200	98	5	81e76508c9050d533853d5fd2f3097b27613d836
ToppCell	LPS_IL1RA-Endothelial-Endothelial-Activated_Alv_Cap\|LPS_IL1RA / Treatment groups by lineage, cell group, cell type	ANKRD50 PCDH12 MACF1 AFDN CDH5	8.02e-05	200	98	5	79e51afb57ca38aacebd0298e5e727b55c0cfff9
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW23-Macroglial-Astrocyte\|GW23 / Sample Type, Dataset, Time_group, and Cell type.	NTRK2 CCDC159 SLITRK2 MRC2 PLEKHH2	8.02e-05	200	98	5	4fe3b2d80c567c18621bff3341f9a73578c81621
ToppCell	Bronchial-NucSeq-Immune_Lymphocytic-NK-ILC-T_NK-NK_CD11d\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TRERF1 DOCK2 HAVCR1 CEP78 LGR6	8.02e-05	200	98	5	bfbd2ccf4b28901aad63d70a382a8247e4458ba6
ToppCell	LPS_only-Endothelial-Endothelial\|LPS_only / Treatment groups by lineage, cell group, cell type	PCDH12 PIK3C2B MACF1 AFDN CDH5	8.02e-05	200	98	5	4bb609a284d4e6066f17470a1736076aa4a1f84c
ToppCell	droplet-Lung-18m-Hematologic-myeloid-non-classical_monocyte-nonclassical_monocyte_l14\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	INTS7 ZNF236 TLE3 DCLRE1A	1.26e-04	116	98	4	f2bf9599040f43b5ea8724841d7b71c0a859c016
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	ABCA13 GREB1L HAVCR1 PLEKHH2	2.32e-04	136	98	4	82b1d6d839c0d0c68e0960549f688138479defcc
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	ABCA13 GREB1L HAVCR1 PLEKHH2	2.38e-04	137	98	4	0aa4e14b32da0cda677cc0ed6ae470f6ecd77bea
ToppCell	facs-Trachea-18m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l20-23\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	MNX1 ARMC12 TDRD1 FAM135B	2.88e-04	144	98	4	e9d62f202f0fa8747961036ef0eafed91fe8a42f
ToppCell	IIF-Lymphocyte-T_NK-dnT\|IIF / Disease, Lineage and Cell Type	ABCA13 USP24 PTPN3 NINJ2	3.03e-04	146	98	4	d0f361662db5f7be26104346e8431f7e30c5ce3a
ToppCell	saliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c01-LEF1\|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)	CIP2A ZNF343 TDRD1 ADGRG4	3.28e-04	149	98	4	4b44108c40376a6b73258df40d2424e68f991383
ToppCell	saliva-Mild-Moderate_progression_d12-25-Myeloid-Macrophage-macrophage,_alveolar-Macro_c2-CCL3L1\|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DOCK2 DDX60 MRC2 CDH5	3.53e-04	152	98	4	18194f757d319958f26e5a91f56d89f25711236f
ToppCell	mild_COVID-19_(asymptomatic)-CD8+_T_naive\|World / disease group, cell group and cell class (v2)	DDX60 LRRN3 EYS MRC2	3.53e-04	152	98	4	f944743f40ff6ed3a7a096dd53e12d3526c67c4d
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)-\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	FNBP4 SPG11 TUBGCP4 RINT1	3.62e-04	153	98	4	553dff9688a1996d8f4ba16e60c683593d781389
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Cyth3_(Cyth3)\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	FNBP4 SPG11 TUBGCP4 RINT1	3.62e-04	153	98	4	88ca2d2c2ab19fbee13e18951b993ee05dd30f67
Disease	proprotein convertase subtilisin/kexin type 9 measurement	USP24 APOB ZNF528	4.76e-05	22	95	3	EFO_0009312
Disease	total blood protein measurement	XPO1 PTPN3 CSF1R TLE3 MACF1 AFDN TUBD1 CLEC16A	1.03e-04	449	95	8	EFO_0004536
Disease	beverage consumption measurement	INTS7 NTRK2 BID SCLT1	1.52e-04	83	95	4	EFO_0010088
Disease	atrial fibrillation	DNAH10 POLR2A KIF1B XPO1 MEI1 TLE3 PITX2	2.01e-04	371	95	7	EFO_0000275
Disease	cholesteryl esters:total lipids ratio, intermediate density lipoprotein measurement	SPG11 APOB HAVCR1 MACF1	3.49e-04	103	95	4	EFO_0008595, EFO_0020944
Disease	very low density lipoprotein cholesterol measurement, phospholipids:total lipids ratio	DNAH10 USP24 SPG11 APOB HAVCR1 MACF1	3.64e-04	291	95	6	EFO_0008317, EFO_0020946
Disease	low density lipoprotein cholesterol measurement, free cholesterol:total lipids ratio	DNAH10 SPG11 APOB HAVCR1 MACF1	4.81e-04	200	95	5	EFO_0004611, EFO_0020945
Disease	gastric adenocarcinoma (is_implicated_in)	ABCA13 XPO1	5.54e-04	11	95	2	DOID:3717 (is_implicated_in)
Disease	triglycerides in medium VLDL measurement	DNAH10 APOB HAVCR1	7.51e-04	55	95	3	EFO_0022155
Disease	triglycerides in large VLDL measurement	DNAH10 APOB HAVCR1	7.92e-04	56	95	3	EFO_0022178
Disease	triglycerides in small VLDL measurement	DNAH10 APOB HAVCR1	1.02e-03	61	95	3	EFO_0022145
Disease	free cholesterol in very large VLDL measurement	DNAH10 APOB HAVCR1	1.02e-03	61	95	3	EFO_0022274
Disease	phospholipids in large VLDL measurement	DNAH10 APOB HAVCR1	1.07e-03	62	95	3	EFO_0022169
Disease	total lipids in very large VLDL measurement	DNAH10 APOB HAVCR1	1.07e-03	62	95	3	EFO_0022313
Disease	phospholipids in very large VLDL measurement	DNAH10 APOB HAVCR1	1.07e-03	62	95	3	EFO_0022299
Disease	cholesterol in large VLDL measurement	DNAH10 APOB HAVCR1	1.22e-03	65	95	3	EFO_0021902
Disease	cholesterol in very large VLDL measurement	DNAH10 APOB HAVCR1	1.22e-03	65	95	3	EFO_0022230
Disease	total lipids in small VLDL	DNAH10 APOB HAVCR1	1.33e-03	67	95	3	EFO_0022148
Disease	total lipids in large VLDL	DNAH10 APOB HAVCR1	1.33e-03	67	95	3	EFO_0022175
Disease	phospholipids:total lipids ratio, intermediate density lipoprotein measurement	SPG11 APOB MACF1	1.33e-03	67	95	3	EFO_0008595, EFO_0020946
Disease	glaucoma (implicated_via_orthology)	NTRK2 PITX2	1.35e-03	17	95	2	DOID:1686 (implicated_via_orthology)
Disease	free cholesterol in large VLDL measurement	DNAH10 APOB HAVCR1	1.39e-03	68	95	3	EFO_0022265
Disease	very low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio	DNAH10 USP24 SPG11 APOB MACF1	1.66e-03	264	95	5	EFO_0008317, EFO_0020944
Disease	ovulation	SYCP2L ABRAXAS1	1.69e-03	19	95	2	GO_0030728
Disease	DDT metabolite measurement	CYP2B6 TSHZ2 EYS	1.78e-03	74	95	3	EFO_0007886
Disease	progression free survival, ovarian serous carcinoma	ABCA13 IQGAP3	2.27e-03	22	95	2	EFO_0004920, EFO_1001516
Disease	hepatocellular carcinoma (is_marker_for)	KIF1B CHD4 XPO1 HAVCR1 CSF1R	2.93e-03	301	95	5	DOID:684 (is_marker_for)
Disease	colon adenocarcinoma (is_implicated_in)	CHD4 CSF1R	3.17e-03	26	95	2	DOID:234 (is_implicated_in)
Disease	level of Sterol ester (27:1/16:0) in blood serum	USP24 APOB	3.17e-03	26	95	2	OBA_2045191
Disease	sleep duration, low density lipoprotein cholesterol measurement	USP24 APOB HAVCR1	3.20e-03	91	95	3	EFO_0004611, EFO_0005271

Protein segments in the cluster

Peptide	Gene	Start	Entry
HILLFLLNNSTNQNK	TDRD1	1156	Q9BXT4
HDQSFQAALQFLTLF	URB2	1171	Q14146
LQEHFSNQDLVFLLL	ABRAXAS1	121	Q6UWZ7
ALTIQLFSQLFHFIN	AFDN	781	P55196
QITEHNNFRTFFQAL	CACNA1A	1731	O00555
VLDDHTQTLFQANLF	ASPSCR1	441	Q9BZE9
SEFSHQNLNLNTLSL	CYP2B6	281	P20813
FHLVSQFIQNRIQAI	nan	536	Q9N2J8
LTRLNQQAHQLAFDS	COG7	571	P83436
NFTHGNFTQDQLTLL	ADGRG4	2356	Q8IZF6
FDVAFLTHLLNQEQL	ABCA13	2181	Q86UQ4
LTHLLNQEQLTNFSV	ABCA13	2186	Q86UQ4
LLVLHNQLSFVNQTF	ABCA13	3696	Q86UQ4
IDSFHNLSFTEQIQQ	ANKRD50	1206	Q9ULJ7
NINFSLSEALHAQSL	CEP78	496	Q5JTW2
FILNTENNFTLTDNH	CDH5	516	P33151
NILNALSLFENINYH	ARMCX4	2221	Q5H9R4
ILNCQVHSNFLNLFQ	ARMC12	226	Q5T9G4
QLFRTLFSVINNSHN	PDS5A	166	Q29RF7
QFLLNFAILGTHNIT	INTS7	891	Q9NVH2
TLQQEQTRHLYFLQL	PTPN3	116	P26045
QISQLLSLLHQGQFQ	PCDH12	961	Q9NPG4
ANNHSALQNNLIFFT	EYS	2451	Q5T1H1
FQNLTSLVVLHLHNN	LGR6	206	Q9HBX8
LQLLTHTFNREFSQV	KIF1B	1586	O60333
TAFTSQQLLELEHQF	MNX1	246	P50219
TCLINNLHLQFVTFV	SLC43A1	436	O75387
NDLQTQLFNFLIIHS	DDX60	151	Q8IY21
QNQAILKHLLENTTF	ECE2	196	P0DPD6
FLRSIDQFANLVLHQ	LSM1	31	O15116
NLLNSKSFLINFIHT	PLXNB2	1321	O15031
LLQNNTLTELRFHNQ	LMOD1	411	P29536
TLKHLVLQFLQQSNL	NXF5	276	Q9H1B4
QQAFLSVQALLHNSS	LY75	1146	O60449
FLSHNLQKFSRAQEQ	MRC2	871	Q9UBG0
LHQLVLNETQFSAFR	LRATD1	76	Q96KN4
QIQLSAQRSHTLEFQ	LRATD2	231	Q96KN1
VLESQFSQLLHQINS	TUBGCP4	536	Q9UGJ1
RNLFLTNLDNLHENN	F8	1191	P00451
NLLLFHRQNVSSFQS	LCN10	141	Q6JVE6
LSQIFADLHQQNQLS	GARIN1B	256	Q96KD3
HDFILLNTDLTQNVQ	GREB1L	1691	Q9C091
AAQLHRTTNFFIDNI	EN1	96	Q05925
RFAHLLNQSQQDFLA	IQGAP3	856	Q86VI3
ITLLIASYINNFHQQ	PLEKHH2	1436	Q8IVE3
FILATQSAQAFLDQH	MACF1	3826	Q9UPN3
TTLQALHGFFQQLQS	MEI1	1211	Q5TIA1
SNQAEHQNLLFVLFL	OR1S2	31	Q8NGQ3
SVATKLNFFIHNLAQ	PIK3C2B	1326	O00750
FFLQHLALINLGNST	OR8J1	61	Q8NGP2
FLRLAFLQLHHQQQS	BTBD18	16	B2RXH4
HLNTQQLTAFQLLFA	EXOSC10	501	Q01780
NFTSQLSSQVEQFLH	APOB	4431	P04114
VNFDVFLQHNNTKLA	CSF1R	231	P07333
FITQDSLQLEQFSHA	DOCK2	1036	Q92608
QNNLEELFHLLNFLT	CHD3	916	Q12873
VLKLSQEFAQLNHFT	CCDC30	86	Q5VVM6
LLRDVFHTTVNFINQ	BID	166	P55957
FLQSSASVQNHEFLL	AHCTF1	941	Q8WYP5
HIQTSQQALQFTDFV	DCLRE1A	251	Q6PJP8
QLASHSLLFQNAFAQ	IDS	66	P22304
VLTFQENLIQTHSQL	FAM135B	361	Q49AJ0
QNNLEELFHLLNFLT	CHD4	906	Q14839
NALIHQLTTFQFEGQ	DNAH10	1906	Q8IVF4
LQHLGNNVFLLQTLF	SLC22A25	371	Q6T423
FSIHQVNQSLGLFLA	SCARA3	176	Q6AZY7
SQLQAQTKAFEFLNH	CCDC159	41	P0C7I6
LNQLNNAATILVFFT	NINJ2	101	Q9NZG7
SALRFLNLSHNQVQD	STK11IP	186	Q8N1F8
INRQSISNFHVLLLQ	FNBP4	546	Q8N3X1
LSELSNLQELYINHN	LRRN3	136	Q9H3W5
NLQELYINHNLLSTI	LRRN3	141	Q9H3W5
DEHQTFLNKINNFSL	FASTKD3	271	Q14CZ7
LFQELQEHFQALTAT	HSBP1L1	21	C9JCN9
NNQTQLFLEHSLLTA	HAVCR1	276	Q96D42
TFDALINLQLLFLNN	SLITRK2	466	Q9H156
LDLIQQSQTLFSQHT	TENM1	841	Q9UKZ4
HFTSQQLQELEATFQ	PITX2	91	Q99697
LVNYQESQSVIHNLL	SEC24D	526	O94855
IHQTFQLIFNILING	CIP2A	231	Q8TCG1
QLLQTLNILFENISH	CLEC16A	96	Q2KHT3
LHQAQNLFKLLNLQS	CLCNKA	641	P51800
FLKNSNLQHINFTRN	NTRK2	111	Q16620
ILSFHNNTSLLFINK	SPG11	156	Q96JI7
FSEQLLNLTLSFLNN	SPG11	606	Q96JI7
QISFSDINQVLAHQL	TUBD1	221	Q9UJT1
HLEFIQNFTNLKVLN	TLR8	576	Q9NR97
QNFIQNLSLFLCTFL	XPO1	316	O14980
LAFSCQQFLSQHVLQ	ZNF343	116	Q6P1L6
QQFLSQHVLQIFLGL	ZNF343	121	Q6P1L6
TFQLHLSELQLFQAE	ZNF880	111	Q6PDB4
FIQQTFLTLHQIINN	ZNF383	151	Q8NA42
INIHQNSFLVLSAAL	SPO16	81	Q5VVC0
FLNQFLEQETHLFSA	RINT1	116	Q6NUQ1
HFDLQFNISQVSIQA	SYCP2L	386	Q5T4T6
RQAQENATLLFNIHL	POLR2A	1031	P24928
LFDFQQLTKQLHVTN	SCLT1	186	Q96NL6
QHLLILQAQFASSLF	TSHZ2	851	Q9NRE2
RQLQQHDFTSQIFSL	TLE3	651	Q04726
INLHNFSNSVLETLN	ZBTB20	81	Q9HC78
AVKFNSDQLNHLFVL	USP24	501	Q9UPU5
FTFQLHLSDLQLFQA	ZNF528	111	Q3MIS6
QALSTSFHQQSLLQA	ZNF236	911	Q9UL36
IILHLSNGSVQINFF	PLK1	521	P53350
HKLDSFTQVFANQNL	TRERF1	141	Q96PN7