| Category | Name | IntersectionWithQuery | PValue | GenesInTerm | GenesInQuery | GenesInTermInQuery | ID |
|---|---|---|---|---|---|---|---|
| GeneOntologyMolecularFunction | DNA-binding transcription factor activity, RNA polymerase II-specific | CDX2 WIZ HOXD8 HOXD13 ZIC5 EBF3 GATA6 SP9 ZFHX3 EBF1 EMX2 RXRB RXRG EBF4 ZNF697 | 1.90e-06 | 1412 | 52 | 15 | GO:0000981 |
| GeneOntologyMolecularFunction | RNA polymerase II cis-regulatory region sequence-specific DNA binding | CDX2 WIZ HOXD13 ZIC5 EBF3 GATA6 SP9 ZFHX3 EBF1 EMX2 RXRB RXRG EBF4 ZNF697 | 2.33e-06 | 1244 | 52 | 14 | GO:0000978 |
| GeneOntologyMolecularFunction | RNA polymerase II transcription regulatory region sequence-specific DNA binding | CDX2 WIZ HOXD8 HOXD13 ZIC5 EBF3 GATA6 SP9 ZFHX3 EBF1 EMX2 RXRB RXRG EBF4 ZNF697 | 2.85e-06 | 1459 | 52 | 15 | GO:0000977 |
| GeneOntologyMolecularFunction | cis-regulatory region sequence-specific DNA binding | CDX2 WIZ HOXD13 ZIC5 EBF3 GATA6 SP9 ZFHX3 EBF1 EMX2 RXRB RXRG EBF4 ZNF697 | 3.00e-06 | 1271 | 52 | 14 | GO:0000987 |
| GeneOntologyMolecularFunction | retinoic acid-responsive element binding | 1.39e-04 | 7 | 52 | 2 | GO:0044323 | |
| GeneOntologyMolecularFunction | nuclear steroid receptor activity | 1.92e-03 | 25 | 52 | 2 | GO:0003707 | |
| GeneOntologyMolecularFunction | methyltransferase activity | 2.28e-03 | 213 | 52 | 4 | GO:0008168 | |
| GeneOntologyMolecularFunction | transferase activity, transferring one-carbon groups | 2.74e-03 | 224 | 52 | 4 | GO:0016741 | |
| GeneOntologyBiologicalProcess | response to retinoic acid | 1.96e-05 | 131 | 52 | 5 | GO:0032526 | |
| GeneOntologyCellularComponent | chromatin | CDX2 HOXD8 HOXD13 EBF3 GATA6 SP9 ZFHX3 EBF1 ARID1A EMX2 RXRB RXRG EBF4 | 6.18e-05 | 1480 | 53 | 13 | GO:0000785 |
| GeneOntologyCellularComponent | ribonuclease MRP complex | 2.24e-04 | 9 | 53 | 2 | GO:0000172 | |
| Domain | Transcription_factor_COE | 8.61e-08 | 4 | 53 | 3 | IPR003523 | |
| Domain | COE1_HLH | 8.61e-08 | 4 | 53 | 3 | PF16423 | |
| Domain | COE1_DBD | 8.61e-08 | 4 | 53 | 3 | PF16422 | |
| Domain | COE_HLH | 8.61e-08 | 4 | 53 | 3 | IPR032201 | |
| Domain | COE_DBD | 8.61e-08 | 4 | 53 | 3 | IPR032200 | |
| Domain | COE | 8.61e-08 | 4 | 53 | 3 | PS01345 | |
| Domain | Transcription_factor_COE_CS | 8.61e-08 | 4 | 53 | 3 | IPR018350 | |
| Domain | IPT | 6.01e-05 | 27 | 53 | 3 | SM00429 | |
| Domain | TIG | 9.17e-05 | 31 | 53 | 3 | PF01833 | |
| Domain | IPT | 1.01e-04 | 32 | 53 | 3 | IPR002909 | |
| Domain | Homeobox_CS | 1.81e-04 | 186 | 53 | 5 | IPR017970 | |
| Domain | Retinoid-X_rcpt/HNF4 | 3.50e-04 | 10 | 53 | 2 | IPR000003 | |
| Domain | - | 3.72e-04 | 120 | 53 | 4 | 3.40.50.150 | |
| Domain | SAM-dependent_MTases | 3.96e-04 | 122 | 53 | 4 | IPR029063 | |
| Domain | Homeobox | 5.20e-04 | 234 | 53 | 5 | PF00046 | |
| Domain | HOMEOBOX_1 | 5.41e-04 | 236 | 53 | 5 | PS00027 | |
| Domain | HOX | 5.51e-04 | 237 | 53 | 5 | SM00389 | |
| Domain | - | 5.67e-04 | 57 | 53 | 3 | 3.30.50.10 | |
| Domain | Homeobox_dom | 5.72e-04 | 239 | 53 | 5 | IPR001356 | |
| Domain | HOMEOBOX_2 | 5.72e-04 | 239 | 53 | 5 | PS50071 | |
| Domain | Znf_NHR/GATA | 5.96e-04 | 58 | 53 | 3 | IPR013088 | |
| Domain | - | 1.22e-03 | 283 | 53 | 5 | 1.10.10.60 | |
| Domain | Wnt | 1.31e-03 | 19 | 53 | 2 | IPR005817 | |
| Domain | WNT1 | 1.31e-03 | 19 | 53 | 2 | SM00097 | |
| Domain | Wnt_CS | 1.31e-03 | 19 | 53 | 2 | IPR018161 | |
| Domain | wnt | 1.31e-03 | 19 | 53 | 2 | PF00110 | |
| Domain | WNT1 | 1.31e-03 | 19 | 53 | 2 | PS00246 | |
| Domain | Homeobox_metazoa | 2.13e-03 | 90 | 53 | 3 | IPR020479 | |
| Domain | Homeodomain-like | 2.46e-03 | 332 | 53 | 5 | IPR009057 | |
| Domain | Ig_E-set | 3.21e-03 | 104 | 53 | 3 | IPR014756 | |
| Domain | HLH | 4.36e-03 | 116 | 53 | 3 | SM00353 | |
| Domain | zf-C4 | 7.55e-03 | 46 | 53 | 2 | PF00105 | |
| Domain | NUCLEAR_REC_DBD_1 | 7.55e-03 | 46 | 53 | 2 | PS00031 | |
| Domain | Znf_hrmn_rcpt | 7.55e-03 | 46 | 53 | 2 | IPR001628 | |
| Domain | Nuclear_hrmn_rcpt | 7.55e-03 | 46 | 53 | 2 | IPR001723 | |
| Domain | ZnF_C4 | 7.55e-03 | 46 | 53 | 2 | SM00399 | |
| Domain | NUCLEAR_REC_DBD_2 | 7.55e-03 | 46 | 53 | 2 | PS51030 | |
| Domain | - | 7.87e-03 | 47 | 53 | 2 | 1.10.565.10 | |
| Domain | HOLI | 8.20e-03 | 48 | 53 | 2 | SM00430 | |
| Domain | Nucl_hrmn_rcpt_lig-bd | 8.20e-03 | 48 | 53 | 2 | IPR000536 | |
| Domain | Hormone_recep | 8.20e-03 | 48 | 53 | 2 | PF00104 | |
| Pathway | KEGG_MEDICUS_REFERENCE_THYROID_HORMONE_SIGNALING_PATHWAY | 7.24e-07 | 9 | 30 | 3 | M47629 | |
| Pathway | KEGG_MEDICUS_VARIANT_PAX8_PPARG_FUSION_TO_PPARG_MEDIATED_TRANSCRIPTION | 4.36e-05 | 5 | 30 | 2 | M49023 | |
| Pathway | WP_VITAMIN_A1_AND_A5X_PATHWAYS | 6.53e-05 | 6 | 30 | 2 | M48097 | |
| Pathway | REACTOME_POU5F1_OCT4_SOX2_NANOG_REPRESS_GENES_RELATED_TO_DIFFERENTIATION | 1.95e-04 | 10 | 30 | 2 | M27208 | |
| Pathway | WP_CANCER_PATHWAYS | 5.97e-04 | 507 | 30 | 6 | M48302 | |
| Pubmed | HOXD8 EBF3 GATA6 ZFHX3 EBF1 ARID1A EMX2 RNF115 RXRB RXRG RNF111 | 8.19e-09 | 709 | 53 | 11 | 22988430 | |
| Pubmed | A census of human transcription factors: function, expression and evolution. | CDX2 HOXD8 HOXD13 EBF3 GATA6 SP9 ZFHX3 EBF1 EMX2 RXRB RXRG EBF4 | 9.31e-09 | 908 | 53 | 12 | 19274049 |
| Pubmed | Cloning of a novel Olf-1/EBF-like gene, O/E-4, by degenerate oligo-based direct selection. | 1.34e-08 | 4 | 53 | 3 | 12139918 | |
| Pubmed | 3.33e-08 | 5 | 53 | 3 | 15261831 | ||
| Pubmed | 4.83e-08 | 130 | 53 | 6 | 19386638 | ||
| Pubmed | 5.78e-08 | 134 | 53 | 6 | 19030180 | ||
| Pubmed | Ebf factors and MyoD cooperate to regulate muscle relaxation via Atp2a1. | 1.16e-07 | 7 | 53 | 3 | 24786561 | |
| Pubmed | Impact of cytosine methylation on DNA binding specificities of human transcription factors. | 1.26e-07 | 544 | 53 | 9 | 28473536 | |
| Pubmed | 3.43e-07 | 808 | 53 | 10 | 20412781 | ||
| Pubmed | An atlas of combinatorial transcriptional regulation in mouse and man. | 7.22e-07 | 877 | 53 | 10 | 20211142 | |
| Pubmed | Transient and lineage-restricted requirement of Ebf3 for sternum ossification. | 7.28e-07 | 12 | 53 | 3 | 32398354 | |
| Pubmed | 7.28e-07 | 12 | 53 | 3 | 30658714 | ||
| Pubmed | Modular patterning of structure and function of the striatum by retinoid receptor signaling. | 1.20e-06 | 14 | 53 | 3 | 18443282 | |
| Pubmed | 1.85e-06 | 16 | 53 | 3 | 11795391 | ||
| Pubmed | 1.85e-06 | 16 | 53 | 3 | 17444492 | ||
| Pubmed | 2.28e-06 | 2 | 53 | 2 | 9150186 | ||
| Pubmed | Retinoid x receptor gamma control of affective behaviors involves dopaminergic signaling in mice. | 2.28e-06 | 2 | 53 | 2 | 20620876 | |
| Pubmed | 2.30e-06 | 251 | 53 | 6 | 29031500 | ||
| Pubmed | Porcn-dependent Wnt signaling is not required prior to mouse gastrulation. | 3.74e-06 | 20 | 53 | 3 | 23760955 | |
| Pubmed | The WNT7b promoter is regulated by TTF-1, GATA6, and Foxa2 in lung epithelium. | 4.36e-06 | 21 | 53 | 3 | 11914369 | |
| Pubmed | 6.61e-06 | 24 | 53 | 3 | 20826655 | ||
| Pubmed | Emx2 directs the development of diencephalon in cooperation with Otx2. | 6.61e-06 | 24 | 53 | 3 | 11493561 | |
| Pubmed | 6.83e-06 | 3 | 53 | 2 | 7831303 | ||
| Pubmed | 6.83e-06 | 3 | 53 | 2 | 9151732 | ||
| Pubmed | Characterization of three RXR genes that mediate the action of 9-cis retinoic acid. | 6.83e-06 | 3 | 53 | 2 | 1312497 | |
| Pubmed | Detection of retinoid X receptors using specific monoclonal and polyclonal antibodies. | 6.83e-06 | 3 | 53 | 2 | 7980510 | |
| Pubmed | Immunohistochemical detection of the retinoid X receptors alpha, beta, and gamma in human prostate. | 6.83e-06 | 3 | 53 | 2 | 12514092 | |
| Pubmed | 6.83e-06 | 3 | 53 | 2 | 11053444 | ||
| Pubmed | Impaired locomotion and dopamine signaling in retinoid receptor mutant mice. | 6.83e-06 | 3 | 53 | 2 | 9452386 | |
| Pubmed | Retinoid X receptors: X-ploring their (patho)physiological functions. | 6.83e-06 | 3 | 53 | 2 | 15608692 | |
| Pubmed | 6.83e-06 | 3 | 53 | 2 | 8034312 | ||
| Pubmed | Retinoid receptors trigger neuritogenesis in retinal degenerations. | 6.83e-06 | 3 | 53 | 2 | 21940995 | |
| Pubmed | 6.83e-06 | 3 | 53 | 2 | 11839661 | ||
| Pubmed | 6.83e-06 | 3 | 53 | 2 | 9883728 | ||
| Pubmed | GATA6 and FOXA2 regulate Wnt6 expression during extraembryonic endoderm formation. | 6.83e-06 | 3 | 53 | 2 | 22607194 | |
| Pubmed | 6.83e-06 | 3 | 53 | 2 | 8799145 | ||
| Pubmed | 1.07e-05 | 28 | 53 | 3 | 20940229 | ||
| Pubmed | 1.07e-05 | 28 | 53 | 3 | 30796806 | ||
| Pubmed | 1.19e-05 | 29 | 53 | 3 | 23499423 | ||
| Pubmed | Zfhx3 is required for the differentiation of late born D1-type medium spiny neurons. | 1.19e-05 | 29 | 53 | 3 | 31491374 | |
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 25488664 | ||
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 1310259 | ||
| Pubmed | Retinoic acid biosynthetic activity and retinoid receptors in the olfactory mucosa of adult mice. | 1.36e-05 | 4 | 53 | 2 | 10079186 | |
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 26355550 | ||
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 9151733 | ||
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 29273679 | ||
| Pubmed | Retinoids activate RXR/CAR-mediated pathway and induce CYP3A. | 1.36e-05 | 4 | 53 | 2 | 19686701 | |
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 33692389 | ||
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 9804293 | ||
| Pubmed | Salmonella regulation of intestinal stem cells through the Wnt/beta-catenin pathway. | 1.36e-05 | 4 | 53 | 2 | 20083111 | |
| Pubmed | 1.36e-05 | 4 | 53 | 2 | 7958454 | ||
| Pubmed | Dlx1/2-dependent expression of Meis2 promotes neuronal fate determination in the mammalian striatum. | 1.61e-05 | 32 | 53 | 3 | 35156680 | |
| Pubmed | Distinct roles and regulations for HoxD genes in metanephric kidney development. | 1.77e-05 | 33 | 53 | 3 | 18159948 | |
| Pubmed | Dual regulation of planar polarization by secreted Wnts and Vangl2 in the developing mouse cochlea. | 2.11e-05 | 35 | 53 | 3 | 32907846 | |
| Pubmed | 2.27e-05 | 5 | 53 | 2 | 12357469 | ||
| Pubmed | Developmental expression of murine retinoid X receptor (RXR) genes. | 2.27e-05 | 5 | 53 | 2 | 8199055 | |
| Pubmed | 2.27e-05 | 5 | 53 | 2 | 12917357 | ||
| Pubmed | Retinoic acid signaling is necessary for the development of the organ of Corti. | 2.27e-05 | 5 | 53 | 2 | 10452855 | |
| Pubmed | GDF15 controls primary cilia morphology and function thereby affecting progenitor proliferation. | 2.27e-05 | 5 | 53 | 2 | 38719753 | |
| Pubmed | Stem cell niche-specific Ebf3 maintains the bone marrow cavity. | 2.27e-05 | 5 | 53 | 2 | 29563184 | |
| Pubmed | The Tumor Suppressor CIC Directly Regulates MAPK Pathway Genes via Histone Deacetylation. | 2.84e-05 | 583 | 53 | 7 | 29844126 | |
| Pubmed | 3.24e-05 | 118 | 53 | 4 | 16971476 | ||
| Pubmed | Systematic immunolocalization of retinoid receptors in developing and adult mouse eyes. | 3.40e-05 | 6 | 53 | 2 | 11328745 | |
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 9153406 | ||
| Pubmed | Spatial distributions of retinoic acid receptor gene transcripts in the prenatal mouse inner ear. | 3.40e-05 | 6 | 53 | 2 | 9548551 | |
| Pubmed | Functional specificity of the two retinoic acid receptor RAR and RXR families in myogenesis. | 3.40e-05 | 6 | 53 | 2 | 9464546 | |
| Pubmed | Inflammatory chemokine release of astrocytes in vitro is reduced by all-trans retinoic acid. | 3.40e-05 | 6 | 53 | 2 | 20557428 | |
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 8801169 | ||
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 8801176 | ||
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 22205725 | ||
| Pubmed | The RXRalpha ligand-dependent activation function 2 (AF-2) is important for mouse development. | 3.40e-05 | 6 | 53 | 2 | 9806918 | |
| Pubmed | The constrained architecture of mammalian Hox gene clusters. | 3.40e-05 | 6 | 53 | 2 | 31209053 | |
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 16428452 | ||
| Pubmed | Progression of the pluripotent epiblast depends upon the NMD factor UPF2. | 3.40e-05 | 6 | 53 | 2 | 36255229 | |
| Pubmed | A genetic dissection of the retinoid signalling pathway in the mouse. | 3.40e-05 | 6 | 53 | 2 | 10604193 | |
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 7947324 | ||
| Pubmed | The primitive endoderm supports lineage plasticity to enable regulative development. | 3.40e-05 | 6 | 53 | 2 | 38917790 | |
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 20621716 | ||
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 9075714 | ||
| Pubmed | 3.40e-05 | 6 | 53 | 2 | 9389446 | ||
| Pubmed | Deterministic and stochastic allele specific gene expression in single mouse blastomeres. | 4.48e-05 | 424 | 53 | 6 | 21731673 | |
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 9428411 | ||
| Pubmed | The chromatin modifier Satb1 regulates cell fate through Fgf signalling in the early mouse embryo. | 4.76e-05 | 7 | 53 | 2 | 28289135 | |
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 20479880 | ||
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 24063807 | ||
| Pubmed | Differential contributions of AF-1 and AF-2 activities to the developmental functions of RXR alpha. | 4.76e-05 | 7 | 53 | 2 | 11493527 | |
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 31299961 | ||
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 12360493 | ||
| Pubmed | Early developmental plasticity enables the induction of an intermediate extraembryonic cell state. | 4.76e-05 | 7 | 53 | 2 | 36332016 | |
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 17195188 | ||
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 10406480 | ||
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 8299717 | ||
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 15635645 | ||
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 36260992 | ||
| Pubmed | 4.76e-05 | 7 | 53 | 2 | 8090775 | ||
| Pubmed | New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice. | 6.23e-05 | 50 | 53 | 3 | 28188179 | |
| Pubmed | 6.34e-05 | 8 | 53 | 2 | 26199412 | ||
| Pubmed | GATA-Binding Factor 6 Contributes to Atrioventricular Node Development and Function. | 6.34e-05 | 8 | 53 | 2 | 25613430 | |
| Pubmed | 6.34e-05 | 8 | 53 | 2 | 10490294 | ||
| Pubmed | Expression of nuclear retinoic acid receptors during mouse odontogenesis. | 6.34e-05 | 8 | 53 | 2 | 7988794 | |
| Interaction | EBF4 interactions | 5.97e-07 | 7 | 53 | 3 | int:EBF4 | |
| Cytoband | 2q31.1 | 1.30e-04 | 84 | 53 | 3 | 2q31.1 | |
| Cytoband | Ensembl 112 genes in cytogenetic band chr2q31 | 1.16e-03 | 178 | 53 | 3 | chr2q31 | |
| GeneFamily | HOXL subclass homeoboxes | 1.38e-04 | 52 | 35 | 3 | 518 | |
| GeneFamily | Wnt family|Endogenous ligands | 6.10e-04 | 19 | 35 | 2 | 360 | |
| GeneFamily | Zinc fingers C2H2-type|ZF class homeoboxes and pseudogenes | 2.33e-03 | 718 | 35 | 6 | 28 | |
| GeneFamily | Nuclear hormone receptors | 4.04e-03 | 49 | 35 | 2 | 71 | |
| Coexpression | BENPORATH_SUZ12_TARGETS | 5.74e-06 | 1035 | 53 | 11 | M9898 | |
| CoexpressionAtlas | ratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500 | 3.54e-06 | 498 | 53 | 9 | PCBC_ratio_EB_vs_SC_500 | |
| CoexpressionAtlas | ratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_1000 | 2.80e-05 | 994 | 53 | 11 | PCBC_ratio_EB_vs_SC_1000 | |
| ToppCell | LPS-antiTNF-Stromal_mesenchymal-Myocytic-Pericyte_3|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2 | 8.50e-07 | 146 | 53 | 5 | 2ac9b487a7991fdc15444aeb93533030e09825bb | |
| ToppCell | 368C-Lymphocytic-CD8+_Cytotoxic_T-cell|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells) | 9.09e-07 | 148 | 53 | 5 | e7bbb5ddf44b11b8495e83863fbf1fd9f3f24472 | |
| ToppCell | Thalamus|World / BrainAtlas - Mouse McCarroll V32 | 1.11e-05 | 116 | 53 | 4 | 5ddfb2dd5459ff6d7ae38163a38eae64fda283b7 | |
| ToppCell | 368C-Lymphocytic-CD8+_Cytotoxic_T-cell|368C / Donor, Lineage, Cell class and subclass (all cells) | 3.14e-05 | 151 | 53 | 4 | 512f7f37ddc8dfa1906f7fff92b571929236c9ea | |
| ToppCell | kidney_cells-Adult_normal_reference-Mesenchymal--glomerular_mesenchymal_cell-Renin-positive_Juxtaglomerular_Granular_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 4.13e-05 | 162 | 53 | 4 | c7114e24cb5525abb9780ca3d35dbcc4eabd4b64 | |
| ToppCell | kidney_cells-Adult_normal_reference-Mesenchymal--glomerular_mesenchymal_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 4.13e-05 | 162 | 53 | 4 | f1851a173d3bcca2981d934161ec85d1cc0af5a2 | |
| ToppCell | kidney_cells-Adult_normal_reference-Mesenchymal-|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 4.13e-05 | 162 | 53 | 4 | 5d902bb31e691aea9749617cc88303c2448f24b8 | |
| ToppCell | renal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-glomerular_mesenchymal_cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group | 4.13e-05 | 162 | 53 | 4 | 82e782096f89cd03d1fdf599ba727d6f23e35e2d | |
| ToppCell | renal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group | 4.13e-05 | 162 | 53 | 4 | 6bed33b17b59812646dc6a29c1d87413bad86c11 | |
| ToppCell | renal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell-mesangial_typical|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group | 4.13e-05 | 162 | 53 | 4 | 502ed67f6a572f10ac6e22948a1747d8214eb974 | |
| ToppCell | renal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal--glomerular_mesenchymal_cell-Renin-positive_Juxtaglomerular_Granular_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group | 4.34e-05 | 164 | 53 | 4 | 43630a448f4369fa9e4e3eccdf3b9f29cec16c39 | |
| ToppCell | renal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group | 4.34e-05 | 164 | 53 | 4 | 108fbecb56d69a675d6ce6e826a873ae528f2fd7 | |
| ToppCell | renal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal--glomerular_mesenchymal_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group | 4.34e-05 | 164 | 53 | 4 | 46208f18325976c89f572f6627aea0582142b92d | |
| ToppCell | renal_cortex_nuclei-Adult_normal_reference-Mesenchymal--glomerular_mesenchymal_cell-Renin-positive_Juxtaglomerular_Granular_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 4.99e-05 | 170 | 53 | 4 | 99dd734c0972a40d5381e8e2d96bdaa31f6d06e6 | |
| ToppCell | renal_cortex_nuclei-Adult_normal_reference-Mesenchymal--glomerular_mesenchymal_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 4.99e-05 | 170 | 53 | 4 | 3a14eeae221b8bb0bd0dadcb8e7a603431240a1e | |
| ToppCell | renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 4.99e-05 | 170 | 53 | 4 | cdb6fad277f284c3fd5a6f45672a8edc24715882 | |
| ToppCell | P15-Endothelial-lymphatic_endothelial_cell-endothelial_cell_of_lymphatic_vessel|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase | 5.58e-05 | 175 | 53 | 4 | 84d252f3e432231687613299bbea14978bb4b06b | |
| ToppCell | P15-Endothelial-lymphatic_endothelial_cell|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase | 5.58e-05 | 175 | 53 | 4 | a00c6fa9b33640710dd05a3799031147196f0986 | |
| ToppCell | COVID-19-kidney-vSMC/Pericyte|COVID-19 / Disease (COVID-19 only), tissue and cell type | 6.09e-05 | 179 | 53 | 4 | 111b1084f73306bdeffaaf240e7dbb4f5bf33de1 | |
| ToppCell | COVID-19-Heart-EC_+_Pericyte|COVID-19 / Disease (COVID-19 only), tissue and cell type | 6.50e-05 | 182 | 53 | 4 | e67f3234165199085c793915ebb1f9bbd845e933 | |
| ToppCell | facs-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l25-31|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype | 6.50e-05 | 182 | 53 | 4 | a1c0e4090a9e7aa4941a40c817d178de144888b6 | |
| ToppCell | P03-Epithelial-epithelial_progenitor_cell-epithelial_unknown_3|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase | 6.78e-05 | 184 | 53 | 4 | 8880ff36c243cc60a524d74934d000aef26a70ac | |
| ToppCell | facs-Brain_Non-Myeloid-Striatum-24m-Mesenchymal-brain_pericyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation | 6.92e-05 | 185 | 53 | 4 | 38486b69c48dc5e1c4e1488208fa8954a973eccb | |
| ToppCell | facs-Brain_Non-Myeloid-Striatum-24m-Mesenchymal-Pericyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation | 6.92e-05 | 185 | 53 | 4 | 3c28b5ceba3cfdb6f7e32d5b42e03b6a81a7a658 | |
| ToppCell | 5'-GW_trimst-2-LymphNode-Mesenchymal-Pericytes-angiogenic_pericyte|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract | 7.22e-05 | 187 | 53 | 4 | b8f88599e22b9b345c7ec3bbecd87a8b2a033f9f | |
| ToppCell | renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group | 7.37e-05 | 188 | 53 | 4 | ce85a56ac27a6432421dde93a1bafa8b943244b9 | |
| ToppCell | renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group | 7.52e-05 | 189 | 53 | 4 | 7fbe855bfdb47d35e040b04a80fe4b729a3764e8 | |
| ToppCell | facs-Skin-Skin_Anagen-18m-Epithelial-Basal_IFE|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation | 7.52e-05 | 189 | 53 | 4 | 1cfc1fe27c4b57b4e52700fa8f679ce172cee5a9 | |
| ToppCell | facs-Skin-nan-18m-Epithelial-Basal_IFE|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation | 7.52e-05 | 189 | 53 | 4 | 6c71e81373cb7822de23c193a6350b6df9f567bc | |
| ToppCell | P03-Mesenchymal-myocytic_cell-vascular_associated_smooth_muscle_cell|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase | 7.52e-05 | 189 | 53 | 4 | b5439ef221106f6d54434f268485e9bb17b39102 | |
| ToppCell | renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group | 7.52e-05 | 189 | 53 | 4 | 06b35abecd29f902cf251fcc1f6ad33db7ab08a2 | |
| ToppCell | facs-Skin-Skin_Anagen-18m-Epithelial-basal_cell_of_epidermis|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation | 7.68e-05 | 190 | 53 | 4 | 3639eb9b887a2d76949cad4a2586524fe0e1015f | |
| ToppCell | Adult-Mesenchymal-matrix_fibroblast_2_cell-D175|Adult / Lineage, Cell type, age group and donor | 7.68e-05 | 190 | 53 | 4 | 7dcca3469f3a3b70db0420cb94f7765f39492f06 | |
| ToppCell | renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group | 7.68e-05 | 190 | 53 | 4 | efb757f11c2809e66ddb48a5c84f5433f111cb7c | |
| ToppCell | COVID-19-kidney-vSMC/Pericyte|kidney / Disease (COVID-19 only), tissue and cell type | 7.83e-05 | 191 | 53 | 4 | fad8eaa536001b911d05ae2b12150c2398cc6f88 | |
| ToppCell | renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 7.99e-05 | 192 | 53 | 4 | b54b0d5b88139905521c8d5d58332e89c08d589c | |
| ToppCell | renal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell-|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group | 7.99e-05 | 192 | 53 | 4 | bfab13793e54de2550ee171397f7ece0625cdb4a | |
| ToppCell | Tracheal-NucSeq-Epithelial-Epi_airway_neuro-secretory-Neuroendocrine|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations | 8.65e-05 | 196 | 53 | 4 | 95544097577f20ed7f4144bd940471cde0617554 | |
| ToppCell | mLN-T_cell-Th17|mLN / Region, Cell class and subclass | 9.00e-05 | 198 | 53 | 4 | 04905f62941b193864704a10ad692faf777fa51d | |
| ToppCell | COVID-19-kidney-Fibroblast-2|kidney / Disease (COVID-19 only), tissue and cell type | 9.00e-05 | 198 | 53 | 4 | ca26ca460856b1faaa3e83766da6abdf63af2b51 | |
| ToppCell | mLN-(1)_T_cell-(13)_Th17|mLN / shred on region, Cell_type, and subtype | 9.00e-05 | 198 | 53 | 4 | c575e9aeee4e034e8c4d171fe754403652343731 | |
| ToppCell | Brain_organoid-organoid_Tanaka_cellReport-5w-Mesenchymal-Mesoderm|5w / Sample Type, Dataset, Time_group, and Cell type. | 9.36e-05 | 200 | 53 | 4 | 0927061536a664b4f7feb9e5b0a8c11ca0d5955c | |
| ToppCell | Tracheal-NucSeq-Stromal-Pericyte-Muscle_pericyte_systemic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations | 9.36e-05 | 200 | 53 | 4 | 9d3ae9ea47b1017adb63aa02d10e98193d478458 | |
| ToppCell | Tracheal-NucSeq-Stromal-Pericyte|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations | 9.36e-05 | 200 | 53 | 4 | 78cd0b7d221ef855512ee9ac9a291f61622c2e24 | |
| ToppCell | frontal_cortex-Neuronal-glutamatergic_neuron-CR-CR_Lhx5|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype | 1.47e-04 | 86 | 53 | 3 | 2990429ed4438f41ff03f4a9cae8863a528fdd81 | |
| ToppCell | frontal_cortex-Neuronal-glutamatergic_neuron-CR|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype | 1.47e-04 | 86 | 53 | 3 | 97467708c90a4bd49deafe3e2ec495c56b448ce1 | |
| Drug | AC1L9M5J | 7.79e-07 | 221 | 53 | 7 | CID000448615 | |
| Drug | Bexarotene | 1.59e-05 | 3 | 53 | 2 | DB00307 | |
| Drug | 2-hydroxyphytanic acid | 1.59e-05 | 3 | 53 | 2 | ctd:C002585 | |
| Drug | AC1O5SBP | 1.59e-05 | 3 | 53 | 2 | CID006439746 | |
| Disease | Klatskin's tumor (is_implicated_in) | 2.80e-05 | 5 | 50 | 2 | DOID:4927 (is_implicated_in) | |
| Disease | Barrett's esophagus (is_marker_for) | 1.53e-04 | 11 | 50 | 2 | DOID:9206 (is_marker_for) | |
| Disease | esophagus adenocarcinoma (is_marker_for) | 1.84e-04 | 12 | 50 | 2 | DOID:4914 (is_marker_for) | |
| Disease | electrocardiography | 2.65e-04 | 530 | 50 | 6 | EFO_0004327 | |
| Disease | anterior thigh muscle fat infiltration measurement | 1.03e-03 | 28 | 50 | 2 | EFO_0020936 | |
| Disease | hematocrit | 1.50e-03 | 1011 | 50 | 7 | EFO_0004348 | |
| Disease | posterior thigh muscle fat infiltration measurement | 1.62e-03 | 35 | 50 | 2 | EFO_0020934 |
| Peptide | Gene | Start | Entry |
|---|---|---|---|
| GGYHVAAAAAAAANL | 41 | Q99626 | |
| AAAAAARLHGGFDSD | 31 | O00178 | |
| VAAVAAGVRASAHGT | 46 | P46597 | |
| AGGAASSAQTHRSFL | 1451 | Q8TEK3 | |
| DSGSDHLAFVRAVAG | 931 | Q7L2E3 | |
| AGAAVAFIGLHTSSF | 176 | P36021 | |
| RSPSAVAAAAAAVFH | 156 | O14497 | |
| FAPEVGGRHAAAAAA | 36 | P13378 | |
| VGARLAGKDHSASFS | 1286 | Q86WG5 | |
| GGVDHAAAFGRIAFS | 206 | Q9HC38 | |
| GSVHFAAIRTSDAGR | 1211 | Q8NDA2 | |
| AHRFAGTSAGAVIAA | 46 | Q8N8W4 | |
| HGGALSLAEASRASF | 26 | Q99988 | |
| SAGVAATTIAGFGHF | 896 | Q9Y3Q4 | |
| GHARDAFSFGTLVES | 186 | Q8IZE3 | |
| TIARVHGTFGAAACS | 36 | Q969H6 | |
| PGGFVHSAAAAAAAA | 166 | Q92908 | |
| FTLLHAAAAAGRGSV | 536 | Q9H8Y5 | |
| STAAQSGVGLARAHF | 41 | Q9BQW3 | |
| AFVAVAARVFAHGAA | 171 | Q9NPF7 | |
| APVFAGTHSGRAAAA | 46 | P35453 | |
| GTHSGRAAAAAAAAA | 51 | P35453 | |
| GLNFARAHAASDTVG | 156 | O60266 | |
| TAAQSGVGLARAHFE | 41 | Q9UH73 | |
| RVGANFDHSSRTSAG | 281 | Q86UT8 | |
| FHSAAAAAAGRGVYS | 51 | Q04743 | |
| ARSAGFHPSGSVLAV | 421 | O95834 | |
| GIGLFALAHAAFSAA | 11 | Q8N4V1 | |
| TAAQSGVGLARAHFE | 41 | Q9H4W6 | |
| RASNAAAAAHTIGGS | 56 | Q92630 | |
| ARLDGGFAAVSRAFH | 161 | Q9H7H0 | |
| RTASGAAAHLVALGF | 16 | O14569 | |
| HGIVGFTRSAALAAN | 156 | P15428 | |
| RHVLAAAAAAAAARG | 166 | Q504T8 | |
| AAGADSGAAVAAHRF | 6 | Q9Y4L5 | |
| GVAGSRRAAAATAAA | 331 | A6NKL6 | |
| HGFIASVAAVARADG | 51 | Q6PIV7 | |
| AGFDTRAGLSSHARA | 776 | O95785 | |
| VAAGGDVSLHNFSAR | 6 | Q5JS54 | |
| HDSGVSAARAAAAAA | 446 | P0CG40 | |
| NSAHSAGVGAIFDRV | 406 | P28702 | |
| AFHPGLAAAASARAS | 16 | P00505 | |
| GASFLQARHGSVSAD | 21 | Q9NWW5 | |
| RAAILSVAGSAGSSH | 101 | P0C880 | |
| SSRAAIFGHQAAAAA | 596 | Q6ZNA4 | |
| RSGFGVSHVADAVFL | 166 | Q96FX7 | |
| SARHVVFSGSGRAAG | 51 | Q8N5L8 | |
| HAIASAGVAFAVTRS | 116 | P56703 | |
| AFVFAITAAGASHAV | 106 | Q9Y6F9 | |
| SSAHSAGVGSIFDRV | 336 | P48443 | |
| RRAHAAASGAGAAAL | 336 | Q5TEC3 | |
| FSHTAGAAAAAVAAA | 766 | Q15911 | |
| VAAAAAAALHGYGAV | 316 | Q96T25 | |
| GFSSHQAVARTAGSV | 561 | Q9UQQ1 | |
| GGVSDHSAFLFVRDA | 361 | P54296 |