Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionstructural constituent of postsynaptic actin cytoskeleton

POTEF POTEE POTEI

7.09e-05111543GO:0098973
GeneOntologyCellularComponentPRC1 complex

PHC1 PHC2 BMI1 PHC3

9.57e-06191524GO:0035102
GeneOntologyCellularComponentintracellular protein-containing complex

CUL4B UBR1 POTEF POLR2A PRAMEF20 CCT4 PSMD10 PHC1 PHC2 RPP25 CUL5 BMI1 POTEE PHC3 BLOC1S6 MTOR DROSHA POTEI PRKAG2

8.40e-0597215219GO:0140535
DomainZnf_FCS

PHC1 PHC2 PHC3

5.33e-0651533IPR012313
DomainZF_FCS

PHC1 PHC2 PHC3

1.06e-0561533PS51024
DomainActin/actin-like_CS

ACTRT3 POTEF POTEE POTEI

1.21e-05181534IPR020902
DomainACTINS_ACT_LIKE

ACTRT3 POTEF POTEE POTEI

1.52e-05191534PS01132
DomainER_stress-assoc

SERP2 SERP1

6.67e-0521532IPR010580
DomainRAMP4

SERP2 SERP1

6.67e-0521532PF06624
DomainARM-type_fold

DOCK3 USP24 MROH5 ARFGEF2 LYST RYR3 FOCAD THADA UPF2 MTOR SYMPK

1.13e-0433915311IPR016024
DomainActin

ACTRT3 POTEF POTEE POTEI

1.15e-04311534IPR004000
DomainActin

ACTRT3 POTEF POTEE POTEI

1.15e-04311534PF00022
DomainACTIN

ACTRT3 POTEF POTEE POTEI

1.15e-04311534SM00268
DomainActin_CS

POTEF POTEE POTEI

2.79e-04161533IPR004001
DomainACTINS_2

POTEF POTEE POTEI

3.37e-04171533PS00432
DomainWHTH_DNA-bd_dom

CUL4B UBR1 GPS1 BLM CUL5 ZBP1 FOXP4 EIF3A

8.73e-042421538IPR011991
DomainRIH_assoc-dom

RYR3 ITPR3

9.79e-0461532IPR013662
DomainIns145_P3_rec

RYR3 ITPR3

9.79e-0461532PF08709
DomainRIH_assoc

RYR3 ITPR3

9.79e-0461532PF08454
DomainRIH_dom

RYR3 ITPR3

9.79e-0461532IPR000699
DomainIns145_P3_rcpt

RYR3 ITPR3

9.79e-0461532IPR014821
DomainRyanodine_recept-rel

RYR3 ITPR3

9.79e-0461532IPR015925
Domain-

RYR3 ITPR3

9.79e-04615321.25.10.30
DomainRYDR_ITPR

RYR3 ITPR3

9.79e-0461532PF01365
DomainSAM_DOMAIN

STARD13 PHC1 PHC2 PHC3 ANKS3

1.11e-03951535PS50105
DomainSAM

STARD13 PHC1 PHC2 PHC3 ANKS3

1.22e-03971535IPR001660
DomainCullin_CS

CUL4B CUL5

1.36e-0371532IPR016157
DomainCULLIN

CUL4B CUL5

1.36e-0371532SM00182
DomainCullin_neddylation_domain

CUL4B CUL5

1.81e-0381532IPR019559
DomainDHC_N1

DNAH8 DNAH9

1.81e-0381532PF08385
DomainCullin_Nedd8

CUL4B CUL5

1.81e-0381532PF10557
DomainCullin_Nedd8

CUL4B CUL5

1.81e-0381532SM00884
DomainDynein_heavy_dom-1

DNAH8 DNAH9

1.81e-0381532IPR013594
DomainAnk_2

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

2.00e-032151537PF12796
Domain-

CUL4B GPS1 BLM CUL5 ZBP1 FOXP4 EIF3A

2.16e-0321815371.10.10.10
DomainCullin_homology

CUL4B CUL5

2.31e-0391532IPR016158
DomainSAM_1

PHC1 PHC2 PHC3 ANKS3

2.35e-03681534PF00536
DomainAnk

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

2.77e-032281537PF00023
DomainSAM/pointed

STARD13 PHC1 PHC2 PHC3 ANKS3

2.77e-031171535IPR013761
DomainMIR

RYR3 ITPR3

2.87e-03101532PF02815
DomainMIR_motif

RYR3 ITPR3

2.87e-03101532IPR016093
DomainCullin

CUL4B CUL5

2.87e-03101532PF00888
DomainMIR

RYR3 ITPR3

2.87e-03101532PS50919
DomainMIR

RYR3 ITPR3

2.87e-03101532SM00472
DomainCULLIN_2

CUL4B CUL5

2.87e-03101532PS50069
DomainCullin_N

CUL4B CUL5

2.87e-03101532IPR001373
DomainCULLIN_1

CUL4B CUL5

2.87e-03101532PS01256
DomainCENP-B_N

CENPB TIGD3

2.87e-03101532PF04218
DomainCullin_repeat-like_dom

CUL4B CUL5

4.17e-03121532IPR016159
DomainHTH_Psq

CENPB TIGD3

4.17e-03121532IPR007889
DomainHTH_PSQ

CENPB TIGD3

4.17e-03121532PS50960
DomainCENPB

CENPB TIGD3

4.17e-03121532SM00674
DomainDDE_1

CENPB TIGD3

4.17e-03121532PF03184
DomainDDE_SF_endonuclease_dom

CENPB TIGD3

4.17e-03121532IPR004875
Domain-

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

4.40e-0324815371.25.40.20
DomainANK

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

4.69e-032511537SM00248
DomainANK_REPEAT

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

4.90e-032531537PS50088
DomainHTH_CENPB

CENPB TIGD3

4.90e-03131532PS51253
DomainHTH_Tnp_Tc5

CENPB TIGD3

4.90e-03131532PF03221
DomainHTH_CenpB_DNA-bd_dom

CENPB TIGD3

4.90e-03131532IPR006600
DomainAnkyrin_rpt-contain_dom

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

5.00e-032541537IPR020683
DomainANK_REP_REGION

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

5.00e-032541537PS50297
DomainDynein_heavy_chain_D4_dom

DNAH8 DNAH9

5.69e-03141532IPR024317
DomainVitD_rcpt

NR2C1 ESR2

5.69e-03141532IPR000324
DomainDynein_HC_stalk

DNAH8 DNAH9

5.69e-03141532IPR024743
DomainDynein_heavy_dom-2

DNAH8 DNAH9

5.69e-03141532IPR013602
DomainDHC_N2

DNAH8 DNAH9

5.69e-03141532PF08393
DomainATPase_dyneun-rel_AAA

DNAH8 DNAH9

5.69e-03141532IPR011704
DomainMT

DNAH8 DNAH9

5.69e-03141532PF12777
DomainAAA_8

DNAH8 DNAH9

5.69e-03141532PF12780
DomainAAA_5

DNAH8 DNAH9

5.69e-03141532PF07728
DomainAnkyrin_rpt

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

5.91e-032621537IPR002110
DomainSAM

PHC1 PHC2 PHC3 ANKS3

5.93e-03881534SM00454
DomainDHC_fam

DNAH8 DNAH9

6.53e-03151532IPR026983
DomainDynein_heavy

DNAH8 DNAH9

6.53e-03151532PF03028
DomainDynein_heavy_dom

DNAH8 DNAH9

6.53e-03151532IPR004273
DomainAAA

ABCA13 ABCC11 RFC1 DNAH8 DNAH9

6.68e-031441535SM00382
DomainAAA+_ATPase

ABCA13 ABCC11 RFC1 DNAH8 DNAH9

6.68e-031441535IPR003593
DomainCBS

CLCN4 PRKAG2

7.42e-03161532SM00116
DomainPINT

GPS1 EIF3A

7.42e-03161532SM00088
PathwayKEGG_MEDICUS_REFERENCE_DEUBIQUITINATION_OF_H2AK119

MBD6 PHC1 PHC2 BMI1 PHC3

2.25e-06261195M47923
PathwayREACTOME_SUMOYLATION_OF_DNA_METHYLATION_PROTEINS

PHC1 PHC2 BMI1 PHC3

8.12e-06161194M27403
PathwayREACTOME_REGULATION_OF_PTEN_GENE_TRANSCRIPTION

GATAD2B PHC1 PHC2 BMI1 PHC3 MTOR

1.21e-05611196M27811
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

CUL4B UBR1 RBM15 GCFC2 SFSWAP POLR2A USP24 ARFGEF2 RFC1 CLIP1 GATAD2B PHC2 BLM PHC3 GSE1 MAD1L1 TIMELESS SYMPK

1.42e-087741561815302935
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

CUL4B DCDC1 SFSWAP CENPB POLR2A VPS50 TSPYL2 SRP9 TRIM24 GATAD2B DAP3 FOXP4 THADA GSE1 DROSHA ANKRD2 GNL2 CLSPN GARRE1 ANKS3 WWC1

3.19e-0811161562131753913
Pubmed

Identification and characterization of interactions between the vertebrate polycomb-group protein BMI1 and human homologs of polyhomeotic.

PHC1 PHC2 BMI1

8.85e-08315639121482
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

STARD13 VIL1 MYH8 POTEF KIF21A GPS1 SRP9 CCT4 CAGE1 SERP2 SERP1 STK31 LYST MIPOL1 POTEE DAP3 CLCN4 DNAJA4 EIF3A POTEI CADPS2 TUBD1 DNAH8

1.33e-0714421562335575683
Pubmed

A high-throughput approach for measuring temporal changes in the interactome.

CUL4B PDE4D PUF60 KIF21A POLR2A GPS1 RPS10 USP24 ARFGEF2 SRP9 CCT4 PSMD10 RUFY1 CLIP1 RPP25 CUL5 MTOR MAD1L1 TIMELESS EIF3A FH SNRPD1 COPS5

1.56e-0714551562322863883
Pubmed

Several distinct polycomb complexes regulate and co-localize on the INK4a tumor suppressor locus.

PHC1 PHC2 BMI1 PHC3

1.87e-0712156419636380
Pubmed

An Interaction Landscape of Ubiquitin Signaling.

GPS1 VPS50 USP24 SRP9 PSMD10 RFC1 BHMT ITPR3 CUL5 SMYD4 DROSHA EIF3A COPS5

2.99e-074811561328190767
Pubmed

mAKAP assembles a protein kinase A/PDE4 phosphodiesterase cAMP signaling module.

AKAP6 PDE4A PDE4D

3.53e-074156311296225
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

RBM15 DMXL2 DDX49 SFSWAP RRP1B PUF60 POLR2A BCKDK RPS10 SRP9 PHC2 BLM DAP3 UPF2 ZNF532 DROSHA GNL2 SNRPD1 SYMPK

4.36e-0710821561938697112
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

CUL4B POLR2A GATAD2B CUL5 GSE1 UPF2 MAD1L1 GNL2 TRMT1L SNRPD1 SYMPK

4.50e-073411561132971831
Pubmed

Unbiased Identification of trans Regulators of ADAR and A-to-I RNA Editing.

PUF60 POTEF RFC1 BLM POTEE GNL2 EIF3A TRMT1L POTEI SNRPD1

4.51e-072711561032433965
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

RBM15 IFT74 VPS50 RTN3 RUFY1 BLM POTEE BRF1 GSE1 DROSHA CENPH POTEI CLSPN GARRE1

4.72e-075881561438580884
Pubmed

A probability-based approach for high-throughput protein phosphorylation analysis and site localization.

RBM15 PDE4D RRP1B GPS1 USP24 RFC1 TRIM29 CLIP1 GATAD2B BLM MAD1L1 TIMELESS ANKS3

4.94e-075031561316964243
Pubmed

Proximity labeling of endogenous RICTOR identifies mTOR complex 2 regulation by ADP ribosylation factor ARF1.

CUL4B GCFC2 SFSWAP ATG2B ARFGEF2 GATAD2B MTOR RPS10P5 TRMT1L

6.06e-07215156935973513
Pubmed

Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.

CUL4B PUF60 IFT74 POLR2A GPS1 RPS10 CCT4 C1orf167 RFC1 GATAD2B CUL5 DAP3 CEP78 PTCD1 MRPS21 EIF3A RPS10P5 TRMT1L SNRPD1 COPS5 HSPA14

6.18e-0713351562129229926
Pubmed

The core of the polycomb repressive complex is compositionally and functionally conserved in flies and humans.

PHC1 PHC2 BMI1 PHC3

6.80e-0716156412167701
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

CUL4B RBM15 CENPB PUF60 POLR2A CCT4 MAU2 RFC1 GATAD2B PHC2 BLM CUL5 ZNF532 CENPH MAD1L1 EIF3A TRMT1L SYMPK

7.69e-0710141561832416067
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

RBM15 SFSWAP RRP1B PUF60 RPS10 SRP9 RFC1 DAP3 CEP78 UPF2 MRPS21 GNL2 TRMT1L SNRPD1 SYMPK

8.57e-077131561529802200
Pubmed

RING1 is associated with the polycomb group protein complex and acts as a transcriptional repressor.

PHC1 PHC2 BMI1

8.79e-07515639199346
Pubmed

Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.

LEMD3 PUF60 POTEF GPS1 RPS10 SRP9 CCT4 PSMD10 RFC1 UPF2 MTOR EIF3A FH

1.05e-065381561328524877
Pubmed

Cockayne syndrome group A and ferrochelatase finely tune ribosomal gene transcription and its response to UV irradiation.

CUL4B GPS1 RPS10 EIF3A COPS5

1.27e-0642156534581821
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

CUL4B NR2C1 RBM15 SFSWAP RRP1B LEMD3 PUF60 POLR2A RPS10 RFC1 TRIM24 GATAD2B BLM PHC3 GNL2 RPS10P5 SYMPK

1.51e-069541561736373674
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

CUL4B RBM15 RRP1B PUF60 POLR2A RPS10 USP24 RFC1 ITPR3 BLM MTOR GNL2 FH SYMPK

1.62e-066531561422586326
Pubmed

Human transcription factor protein interaction networks.

NR2C1 RRP1B RPS10 CCT4 RFC1 MBD6 TRIM24 GATAD2B BLM FHAD1 DAP3 PHC3 FOXP4 TIMM10 GSE1 MRPS21 GNL2 EIF3A TRMT1L GARRE1 SYMPK

1.82e-0614291562135140242
Pubmed

A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.

CENPB RRP1B BCKDK SRP9 CCT4 RFC1 JMY ITPR3 CUL5 ZBP1 DAP3 THADA MTOR VPS35L MRPS21 GNL2 EIF3A CTNNA2 TRMT1L SNRPD1 GARRE1

2.06e-0614401562130833792
Pubmed

An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.

CUL4B STARD13 CENPB RRP1B IFT74 GPS1 VPS50 ATG2B CLIP1 MIPOL1 BLM THADA TIMM10 MTOR CENPH PIBF1 SNRPD1 COPS5 ANKS3 CCDC144A

2.10e-0613211562027173435
Pubmed

SENP3 and USP7 regulate Polycomb-rixosome interactions and silencing functions.

PHC1 PHC2 BMI1 PHC3

2.20e-0621156437014752
Pubmed

PRC1 and Suv39h specify parental asymmetry at constitutive heterochromatin in early mouse embryos.

PHC1 PHC2 BMI1 PHC3

2.20e-0621156418311137
Pubmed

Kelch Domain of Gigaxonin Interacts with Intermediate Filament Proteins Affected in Giant Axonal Neuropathy.

DCDC1 POTEF RPS10 CCT4 PKD1 EIF3A CTNNA2 DNAH8

2.21e-06187156826460568
Pubmed

MAPKAP kinase 3pK phosphorylates and regulates chromatin association of the polycomb group protein Bmi1.

PHC1 PHC2 BMI1

3.06e-067156315563468
Pubmed

MYC Protein Interactome Profiling Reveals Functionally Distinct Regions that Cooperate to Drive Tumorigenesis.

NR2C1 DDX49 RRP1B POLR2A TRIM24 GATAD2B BLM GSE1 GNL2 CLSPN

3.38e-063391561030415952
Pubmed

Systematic analysis of human protein complexes identifies chromosome segregation proteins.

CUL4B PDE4D DDX49 LEMD3 POLR2A GPS1 MAU2 TRIM29 CLIP1 BLM CEP78 DNAJA4 MAD1L1 TIMELESS EIF3A PIBF1 SNRPD1 COPS5

4.76e-0611551561820360068
Pubmed

Discovery and Characterization of ZUFSP/ZUP1, a Distinct Deubiquitinase Class Important for Genome Stability.

DMXL2 IFT74 USP24 BLM MTOR VPS41 TIMELESS

4.80e-06147156729576527
Pubmed

MAPKAP kinase MK2 maintains self-renewal capacity of haematopoietic stem cells.

PHC1 PHC2 BMI1

4.88e-068156319369945
Pubmed

Mesenchymal-stem-cell-induced immunoregulation involves FAS-ligand-/FAS-mediated T cell apoptosis.

LYST BLOC1S6 BTK

4.88e-068156322542159
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

RBM15 DDX49 SFSWAP PUF60 POLR2A FASTKD1 CCT4 PHC1 BMI1 PTCD1 MRPS21 GNL2 TRMT1L SNRPD1

5.23e-067231561434133714
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

AKAP6 DOCK3 NR2C1 DMXL2 DSCAM IFT74 KIF21A TSPYL2 ARFGEF2 RYR3 MIPOL1 FOCAD ZNF532 DROSHA ASPA VPS35L PKD1 CADPS2 COPS5

5.40e-0612851561935914814
Pubmed

SR protein kinases promote splicing of nonconsensus introns.

DOCK3 RBM15 RRP1B ABCA13 STK31 MIPOL1 GSE1 EIF3A CADPS2 DNAH9

5.88e-063611561026167880
Pubmed

AMBRA1 interplay with cullin E3 ubiquitin ligases regulates autophagy dynamics.

CUL4B GPS1 CCT4 PSMD10 CUL5

6.44e-0658156525499913
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

RBM15 SFSWAP RRP1B PUF60 RPS10 TSPYL2 SRP9 CCT4 RFC1 DROSHA GNL2 EIF3A TRMT1L SNRPD1 SYMPK

6.95e-068471561535850772
Pubmed

Proximity biotinylation and affinity purification are complementary approaches for the interactome mapping of chromatin-associated protein complexes.

RBM15 DDX49 LEMD3 IFT74 POLR2A RPS10 ATG2B PSMD10 RFC1 PHC1 PHC2 DYRK1B PIBF1

7.52e-066451561325281560
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

CENPB PUF60 IFT74 POLR2A TRIM29 TRIM24 CREB5 GATAD2B BLM FOXP4 GSE1 MAD1L1 TRMT1L HSPA14 SYMPK

7.99e-068571561525609649
Pubmed

In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.

RBM15 RRP1B RPS10 SRP9 CCT4 RFC1 DAP3 UPF2 DNAJA4 MRPS21 GNL2 EIF3A CTNNA2 TRMT1L CLSPN NCKAP1L

8.35e-069711561633306668
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

DOCK3 PDE4A PUF60 POLR2A ARFGEF2 MBD6 LYST PHC2 ITPR3 FOCAD THADA MTOR MAD1L1 PKD1 TIGD3 DIP2C SYMPK

1.05e-0511051561735748872
Pubmed

A Network of Conserved Synthetic Lethal Interactions for Exploration of Precision Cancer Therapy.

RPS10 RFC1 BLM MTOR FH

1.13e-0565156527453043
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

DDX49 SFSWAP RRP1B LEMD3 POLR2A BCKDK SRP9 CCT4 GATAD2B PHC2 BLM POTEE PHC3 PTCD1 DROSHA CRACDL GNL2 EIF3A CTNNA2 TRMT1L

1.33e-0514971562031527615
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

VIL1 RBM15 SFSWAP RRP1B PUF60 BCKDK SRP9 RFC1 CLIP1 PHC2 PHC3 GPC3 CEP78 UPF2 DROSHA GNL2 CTNNA2 SNRPD1 HSPA14

1.34e-0513711561936244648
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

RBM15 PUF60 KIF21A USP24 ARFGEF2 CCT4 BLM MAD1L1 TRMT1L SNRPD1 COPS5 SYMPK

1.36e-055821561220467437
Pubmed

Involvement of the Polycomb-group gene Ring1B in the specification of the anterior-posterior axis in mice.

PHC1 PHC2 BMI1

1.42e-0511156312183370
Pubmed

The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.

PDE4A RRP1B PUF60 POTEF RPS10 SRP9 CCT4 GATAD2B RPP25 POTEE DAP3 MRPS21 EIF3A RPS10P5 TRMT1L POTEI SNRPD1

1.81e-0511531561729845934
Pubmed

Structural insights into the COP9 signalosome and its common architecture with the 26S proteasome lid and eIF3.

GPS1 EIF3A COPS5

1.89e-0512156320399188
Pubmed

Regulation of mTOR by polycystin-1: is polycystic kidney disease a case of futile repair?

MTOR PKD1

2.00e-052156217102641
Pubmed

A complex RARE is required for the majority of Nedd9 embryonic expression.

NEDD9 PKD1

2.00e-052156225120220
Pubmed

A primate-specific POTE-actin fusion protein plays a role in apoptosis.

POTEF POTEE

2.00e-052156219669888
Pubmed

BMI1 regulates PRC1 architecture and activity through homo- and hetero-oligomerization.

PHC2 BMI1

2.00e-052156227827373
Pubmed

Rapamycin, a mTOR inhibitor, induced growth inhibition in retinoblastoma Y79 cell via down-regulation of Bmi-1.

BMI1 MTOR

2.00e-052156226191215
Pubmed

The FKBP12-rapamycin-associated protein (FRAP) is a CLIP-170 kinase.

CLIP1 MTOR

2.00e-052156212231510
Pubmed

Lymphoblastic lymphoma in a colony of N:NIH(S)-bg-nu-xid mice.

LYST BTK

2.00e-05215621434498
Pubmed

Correction of symptoms of platelet storage pool deficiency in animal models for Chediak-Higashi syndrome and Hermansky-Pudlak syndrome.

LYST BLOC1S6

2.00e-05215623902123
Pubmed

Stimulation of p70S6 kinase via a growth hormone-controlled phosphatidylinositol 3-kinase pathway leads to the activation of a PDE4A cyclic AMP-specific phosphodiesterase in 3T3-F442A preadipocytes.

PDE4A PDE4D

2.00e-05215629520403
Pubmed

[Correlation between estrogen receptor β and ABCC11 gene single nucleotide polymorphisms and axillary osmidrosis].

ESR2 ABCC11

2.00e-052156230971527
Pubmed

Nedd9 restrains renal cystogenesis in Pkd1-/- mice.

NEDD9 PKD1

2.00e-052156225139996
Pubmed

Identification and characterisation of novel mammalian homologues of Drosophila polyhomeoticpermits new insights into relationships between members of the polyhomeotic family.

PHC2 PHC3

2.00e-052156212384788
Pubmed

Membrane Tension Acts Through PLD2 and mTORC2 to Limit Actin Network Assembly During Neutrophil Migration.

MTOR PLD2

2.00e-052156227280401
Pubmed

Altered expression of COP9 signalosome proteins in preeclampsia.

GPS1 COPS5

2.00e-052156222103747
Pubmed

The chaperonin CCT interacts with and mediates the correct folding and activity of three subunits of translation initiation factor eIF3: b, i and h.

CCT4 EIF3A

2.00e-052156224320561
Pubmed

Overexpression of Claspin and Timeless protects cancer cells from replication stress in a checkpoint-independent manner.

TIMELESS CLSPN

2.00e-052156230796221
Pubmed

Synergistic induction of apoptosis by combination of BTK and dual mTORC1/2 inhibitors in diffuse large B cell lymphoma.

MTOR BTK

2.00e-052156224970801
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

NR2C1 IFT74 ATG2B USP24 TRIM24 RUFY1 PHC1 PHC3 GSE1 ZNF532

2.08e-054181561034709266
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

NR2C1 RRP1B RFC1 TRIM24 GATAD2B PHC1 BLM BMI1 DAP3 PHC3 GNL2 TIMELESS

2.10e-056081561236089195
Pubmed

L2DTL/CDT2 interacts with the CUL4/DDB1 complex and PCNA and regulates CDT1 proteolysis in response to DNA damage.

CUL4B GPS1 COPS5

2.45e-0513156316861906
Pubmed

Overexpression of Polycomb-group gene rae28 in cardiomyocytes does not complement abnormal cardiac morphogenesis in mice lacking rae28 but causes dilated cardiomyopathy.

PHC1 PHC2 BMI1

2.45e-0513156311950896
Pubmed

Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV.

LEMD3 FASTKD1 PAQR5 ARFGEF2 ECI1 CLIP1 BLM FOCAD THADA VPS41 TIMELESS CTNNA2 FH GFM1 GARRE1 SYMPK

2.47e-0510611561633845483
Pubmed

An antibody-based proximity labeling map reveals mechanisms of SARS-CoV-2 inhibition of antiviral immunity.

CUL4B NR2C1 MIA3 GCFC2 LEMD3 POLR2A VPS50 SRP9 GATAD2B GNL2 DCLRE1A CLSPN GFM1

2.87e-057331561334672954
Pubmed

Herpes virus deneddylases interrupt the cullin-RING ligase neddylation cycle by inhibiting the binding of CAND1.

CUL4B CUL5 COPS5

3.11e-0514156322474075
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

RRP1B POLR2A MAU2 RFC1 JMY GATAD2B PHC1 PHC2 BMI1 PHC3 CEP78

3.12e-055331561130554943
Pubmed

PCGF homologs, CBX proteins, and RYBP define functionally distinct PRC1 family complexes.

PHC1 PHC2 BMI1 PHC3

3.47e-0541156422325352
Pubmed

Ubiquitin-specific proteases 7 and 11 modulate Polycomb regulation of the INK4a tumour suppressor.

PHC1 PHC2 BMI1

3.87e-0515156320601937
Pubmed

Identification of a novel actin isoform in hepatocellular carcinoma.

POTEF POTEE POTEI

3.87e-0515156316824795
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

UBR1 DMXL2 MIA3 CUL5 SMYD4 GSE1 CEP78 UPF2 DROSHA TIMELESS CLSPN GARRE1

4.01e-056501561238777146
Pubmed

The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.

RBM15 CENPB RRP1B BCKDK RFC1 BLM CEP78 UPF2 DROSHA CENPH GNL2 TRMT1L HSPA14

4.11e-057591561335915203
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

RBM15 CENPB ABCA13 POLR2A RPS10 TRIM29 GATAD2B ITPR3 BLM POTEE DCLRE1A SNRPD1

4.13e-056521561231180492
Pubmed

Mechanistic insights into COVID-19 by global analysis of the SARS-CoV-2 3CLpro substrate degradome.

RBM15 ITPR3 EIF3A CLSPN

4.19e-0543156434672947
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

RBM15 SFSWAP RRP1B POLR2A RPS10 SRP9 CCT4 RFC1 PHC2 BLM GNL2 EIF3A CLSPN GFM1 SYMPK

4.20e-059891561536424410
Pubmed

A High-Density Human Mitochondrial Proximity Interaction Network.

MIA3 RRP1B LEMD3 BCKDK FASTKD1 ATG2B RTN3 CCT4 ITPR3 BLM POTEE DAP3 THADA UPF2 MRPS21 GNL2 APOL2 GFM1 MTRF1L

4.41e-0514961561932877691
Pubmed

An atlas of combinatorial transcriptional regulation in mouse and man.

GCFC2 CENPB ESR2 POLR2A NFKBIZ RFC1 TRIM29 TRIM24 BMI1 BRF1 ANKRD2 DIP2C TIMELESS ANKS3

4.42e-058771561420211142
Pubmed

Mouse screen reveals multiple new genes underlying mouse and human hearing loss.

FNIP2 STARD13 DMXL2 PRAMEF20 USP24 MAU2 TRIM29 SMYD4 MTOR CRACDL MRPS21 TIMELESS APOL2 GFM1 VWA5B1 MTRF1L SYMPK

4.59e-0512421561730973865
Pubmed

Virus-Host Interactome and Proteomic Survey Reveal Potential Virulence Factors Influencing SARS-CoV-2 Pathogenesis.

MIA3 ARFGEF2 RUFY1 CLIP1 ITPR3 BLM TIMELESS PIBF1

4.69e-05285156832838362
Pubmed

CAND1 enhances deneddylation of CUL1 by COP9 signalosome.

CUL4B GPS1 COPS5

4.75e-0516156316036220
Pubmed

hPrimpol1/CCDC111 is a human DNA primase-polymerase required for the maintenance of genome integrity.

BLM TIMELESS CLSPN

4.75e-0516156324126761
Pubmed

Role of histone H2A ubiquitination in Polycomb silencing.

PHC1 PHC2 BMI1

4.75e-0516156315386022
Pubmed

Transcription factor Foxp3 and its protein partners form a complex regulatory network.

RBM15 DDX49 POLR2A CCT4 PHC2 FOXP4 GNL2 TRMT1L NCKAP1L

4.79e-05370156922922362
Pubmed

Phosphoproteome analysis of the human mitotic spindle.

CENPB RRP1B RFC1 CLIP1 BLM PHC3 MAD1L1

4.82e-05210156716565220
Pubmed

A multi-factor trafficking site on the spliceosome remodeling enzyme BRR2 recruits C9ORF78 to regulate alternative splicing.

CUL4B IFT74 GPS1 VPS50 RFC1 GATAD2B DAP3 TIMELESS GFM1 COPS5 SYMPK

4.87e-055601561135241646
Pubmed

DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation.

PUF60 POLR2A BRINP1 PTCD1 SNRPD1

5.22e-0589156522446626
Pubmed

High-sensitivity profiling of SARS-CoV-2 noncoding region-host protein interactome reveals the potential regulatory role of negative-sense viral RNA.

RRP1B PUF60 GPS1 RPS10 CCT4 GATAD2B DAP3 EIF3A TRMT1L SNRPD1

5.49e-054691561037314180
Pubmed

Proteomics analysis of the centromere complex from HeLa interphase cells: UV-damaged DNA binding protein 1 (DDB-1) is a component of the CEN-complex, while BMI-1 is transiently co-localized with the centromeric region in interphase.

CENPB PHC2 BMI1 CENPH

5.98e-0547156415009096
Pubmed

Polycystin-1 affects cancer cell behaviour and interacts with mTOR and Jak signalling pathways in cancer cell lines.

MTOR PKD1

5.98e-053156231251475
Pubmed

cAMP-stimulated protein phosphatase 2A activity associated with muscle A kinase-anchoring protein (mAKAP) signaling complexes inhibits the phosphorylation and activity of the cAMP-specific phosphodiesterase PDE4D3.

AKAP6 PDE4D

5.98e-053156220106966
Pubmed

Tsc1 haploinsufficiency without mammalian target of rapamycin activation is sufficient for renal cyst formation in Tsc1+/- mice.

BLM MTOR

5.98e-053156216912167
InteractionHSP90AA2P interactions

CUL4B RUFY1 CUL5 PLD2 FH COPS5

3.84e-06551546int:HSP90AA2P
InteractionABT1 interactions

DDX49 CENPB RRP1B RPS10 TSPYL2 RPP25 BLM DAP3 PTCD1 DROSHA MRPS21 GNL2 TRMT1L ANKS3

4.75e-0642315414int:ABT1
InteractionSRP14 interactions

RBM15 RRP1B ESR2 SRP9 BLM BMI1 DAP3 DNAJA4 MRPS21 GNL2 CLSPN SNRPD1 COPS5

4.93e-0636615413int:SRP14
InteractionERCC8 interactions

CUL4B POLR2A GPS1 RPS10 CCT4 CUL5 EIF3A COPS5

5.04e-061241548int:ERCC8
InteractionSNRNP40 interactions

CUL4B NR2C1 RBM15 GCFC2 SFSWAP RRP1B GPS1 RFC1 TRIM24 BLM PHC3 GSE1 ZNF532 GNL2 TRMT1L SNRPD1 COPS5

7.87e-0663715417int:SNRNP40
InteractionSRPK2 interactions

DOCK3 RBM15 SFSWAP RRP1B PUF60 ESR2 POLR2A GPS1 RPS10 MIPOL1 BMI1 GSE1 DROSHA GNL2 EIF3A CADPS2 SNRPD1 DNAH9

9.65e-0671715418int:SRPK2
InteractionNPTN interactions

DMXL2 GCFC2 VPS50 FASTKD1 USP24 ARFGEF2 FOCAD THADA MTOR APOL2 SYMPK

9.93e-0627815411int:NPTN
InteractionASB6 interactions

CUL4B POLR2A GPS1 CUL5 FH CADPS2 COPS5

1.10e-05991547int:ASB6
InteractionADAR interactions

PUF60 POTEF ESR2 SRP9 MAU2 BMI1 POTEE DROSHA GNL2 TRMT1L POTEI

1.30e-0528615411int:ADAR
InteractionDDB2 interactions

CUL4B GPS1 USP24 CCT4 CUL5 TIGD3 CLSPN COPS5

1.44e-051431548int:DDB2
InteractionRPS26P54 interactions

CUL4B CUL5 COPS5

1.50e-0571543int:RPS26P54
InteractionAKR7L interactions

GCFC2 DDX49 RFC1 RPP25 FOCAD UPF2

1.86e-05721546int:AKR7L
InteractionSNRNP70 interactions

CUL4B RBM15 SFSWAP RRP1B PUF60 PLEKHG7 ESR2 POLR2A RPS10 SRP9 RFC1 CUL5 DAP3 CEP78 UPF2 MRPS21 GNL2 TRMT1L SNRPD1 COPS5 SYMPK

1.98e-0598415421int:SNRNP70
InteractionCOPS9 interactions

CUL4B UBR1 GPS1 CUL5 COPS5

2.33e-05451545int:COPS9
InteractionRPL21P19 interactions

CUL4B CUL5 COPS5

2.38e-0581543int:RPL21P19
InteractionRPL21P16 interactions

CUL4B CUL5 COPS5

2.38e-0581543int:RPL21P16
InteractionNUP43 interactions

NR2C1 RBM15 DSCAM RRP1B IFT74 TSPYL2 SRP9 RFC1 BLM PHC3 GSE1 ZNF532 GNL2 TIMELESS TRMT1L DNAH9

2.46e-0562515416int:NUP43
InteractionCBX7 interactions

UBR1 PHC1 PHC2 BMI1 PHC3

2.60e-05461545int:CBX7
InteractionRPL29P30 interactions

CUL4B CUL5 COPS5

3.55e-0591543int:RPL29P30
InteractionRBM3 interactions

CUL4B NFKBIZ CCT4 BLM CUL5 DAP3 PTCD1 COPS5

3.70e-051631548int:RBM3
InteractionRPS16 interactions

CUL4B RRP1B RPS10 TSPYL2 SRP9 RFC1 MBD6 TRIM24 RUFY1 BLM CUL5 FOCAD GNL2 EIF3A RPS10P5 TRMT1L COPS5

4.03e-0572415417int:RPS16
InteractionRBM42 interactions

SFSWAP RRP1B ESR2 RPS10 PTCD1 MRPS21 GNL2 EIF3A TRMT1L SNRPD1 COPS5

4.95e-0533115411int:RBM42
InteractionRPL7AP9 interactions

CUL4B CUL5 COPS5

5.05e-05101543int:RPL7AP9
InteractionGYPA interactions

FASTKD1 USP24 RUFY1 FOCAD THADA MTOR TIMELESS SYMPK

5.88e-051741548int:GYPA
InteractionRPL23A interactions

CUL4B RRP1B RPS10 SRP9 RUFY1 CLIP1 MIPOL1 BLM CUL5 MTOR GNL2 RPS10P5 TRMT1L GFM1 COPS5

6.52e-0560615415int:RPL23A
InteractionPCGF3 interactions

ESR2 PHC1 PHC2 BMI1 PHC3 POTEI

6.63e-05901546int:PCGF3
InteractionRPL7P32 interactions

CUL4B CUL5 COPS5

6.90e-05111543int:RPL7P32
InteractionRPSAP12 interactions

CUL4B CUL5 COPS5

6.90e-05111543int:RPSAP12
InteractionH2AC17 interactions

CUL4B RPS10 TRIM29 BLM CUL5 DAP3 PTCD1 GNL2 COPS5

7.58e-052321549int:H2AC17
InteractionITPKB interactions

PDE4A PDE4D ESR2 PIBF1

7.70e-05301544int:ITPKB
InteractionMAPKAPK2 interactions

SFSWAP ESR2 RFC1 TRIM29 PHC1 PHC2 COPS5

7.74e-051341547int:MAPKAPK2
InteractionKLF15 interactions

RRP1B RPS10 TRIM24 BLM DAP3 FOXP4 TIMM10 GSE1 MRPS21 EIF3A

8.09e-0529015410int:KLF15
InteractionLHX2 interactions

NR2C1 RRP1B RFC1 TRIM24 BLM DAP3 FOXP4 GNL2

8.38e-051831548int:LHX2
InteractionGFI1B interactions

CENPB TSPYL2 PHC2 MTOR TIMELESS COPS5 ANKS3

8.50e-051361547int:GFI1B
InteractionSSB interactions

CUL4B PUF60 ESR2 RPS10 SRP9 CCT4 TRIM24 BMI1 MTOR TIMELESS EIF3A SNRPD1 COPS5

9.09e-0548415413int:SSB
InteractionRPL36AP37 interactions

CUL4B CUL5 COPS5

9.15e-05121543int:RPL36AP37
InteractionCSNK2B interactions

DSCAM CENPB RRP1B ESR2 POLR2A TSPYL2 ARFGEF2 RFC1 LYST GATAD2B PHC2 ITPR3 BLM BMI1 CLSPN

9.20e-0562515415int:CSNK2B
InteractionADARB1 interactions

RRP1B PUF60 POTEF RPS10 RFC1 BLM BMI1 DAP3 GNL2 EIF3A TRMT1L POTEI SNRPD1

1.01e-0448915413int:ADARB1
InteractionEPB41L2 interactions

RRP1B ESR2 GPS1 SRP9 CLIP1 UPF2 TIMELESS POTEI COPS5 WWC1

1.04e-0429915410int:EPB41L2
InteractionSOX15 interactions

NR2C1 RRP1B DAP3 FOXP4 GSE1 GNL2 TRMT1L

1.07e-041411547int:SOX15
InteractionKLHL4 interactions

MIA3 DSCAM GPS1 COPS5

1.13e-04331544int:KLHL4
InteractionCHEK1 interactions

RPS10 RFC1 BLM CEP78 MTOR UNC5CL TIMELESS CLSPN COPS5

1.15e-042451549int:CHEK1
InteractionRPL7AP27 interactions

CUL4B CUL5 COPS5

1.18e-04131543int:RPL7AP27
InteractionHNRNPU interactions

RRP1B LEMD3 POLR2A RPS10 SRP9 MAU2 RFC1 TRIM29 TRIM24 CUL5 FOCAD DAP3 BRF1 PTCD1 MRPS21 GNL2 EIF3A TRMT1L SNRPD1 COPS5

1.24e-04103515420int:HNRNPU
InteractionCSNK2A2 interactions

CUL4B GCFC2 RRP1B RPS10 TSPYL2 CCT4 LYST GATAD2B PHC1 PHC2 BMI1 PHC3 BRF1 EIF3A TRMT1L ANKS3

1.26e-0471815416int:CSNK2A2
InteractionNCL interactions

CUL4B RRP1B PUF60 ESR2 POLR2A RPS10 SRP9 MAU2 RFC1 RUFY1 CUL5 BMI1 DAP3 BRF1 EIF3A SNRPD1 COPS5

1.32e-0479815417int:NCL
InteractionMAPKAP1 interactions

CUL4B ESR2 ECI1 PTCD1 MTOR MRPS21 TIMELESS

1.33e-041461547int:MAPKAP1
InteractionKHSRP interactions

CUL4B PUF60 ESR2 MAU2 MBD6 CUL5 BMI1 DROSHA COPS5 SYMPK

1.33e-0430815410int:KHSRP
InteractionMRPS31 interactions

POTEF ESR2 TRIM24 RUFY1 LYST DAP3 MRPS21 GNL2 GFM1 MTRF1L

1.40e-0431015410int:MRPS31
InteractionGAN interactions

DCDC1 POTEF ESR2 RPS10 CCT4 PKD1 EIF3A CTNNA2 DNAH8

1.46e-042531549int:GAN
InteractionPCBD1 interactions

CUL4B CUL5 DYRK1B DIP2C TIMELESS COPS5

1.48e-041041546int:PCBD1
InteractionCENPA interactions

DDX49 CENPB RRP1B LEMD3 RFC1 GATAD2B PHC2 BLM BMI1 CENPH GNL2

1.57e-0437715411int:CENPA
InteractionPOU5F1 interactions

CUL4B LEMD3 SRP9 CCT4 PSMD10 RFC1 TRIM24 CLIP1 GATAD2B PHC1 ITPR3 FOXP4 PLD2 SYMPK

1.61e-0458415414int:POU5F1
InteractionTRIM27 interactions

CUL4B MIA3 ESR2 TRIM29 CREB5 GATAD2B CUL5 NEDD9 BMI1 BRF1 GSE1 PIBF1 GARRE1

1.65e-0451415413int:TRIM27
InteractionRECQL4 interactions

CUL4B UBR1 PUF60 IFT74 PLEKHG7 POLR2A GPS1 RPS10 CCT4 C1orf167 RFC1 GATAD2B CUL5 DAP3 CEP78 PTCD1 MRPS21 TIMELESS EIF3A RPS10P5 TRMT1L SNRPD1 COPS5 HSPA14

1.81e-04141215424int:RECQL4
InteractionSIRT7 interactions

CUL4B RBM15 RRP1B PUF60 ESR2 POLR2A RPS10 USP24 RFC1 ITPR3 BLM MTOR GNL2 FH COPS5 SYMPK

1.89e-0474415416int:SIRT7
InteractionBRCA1 interactions

CUL4B UBR1 CENPB ESR2 POLR2A ARFGEF2 CCT4 MAU2 RFC1 TRIM29 TRIM24 RUFY1 CLIP1 CREB5 GATAD2B BLM DNAJA4 MTOR DCLRE1A EIF3A CLSPN HSPA14

2.11e-04124915422int:BRCA1
InteractionH2AC16 interactions

CUL4B CUL5 COPS5

2.28e-04161543int:H2AC16
InteractionH2AC15 interactions

CUL4B CUL5 COPS5

2.28e-04161543int:H2AC15
InteractionRICTOR interactions

CUL4B GCFC2 SFSWAP PLEKHG7 ESR2 ATG2B ARFGEF2 CCT4 GATAD2B CUL5 MTOR EIF3A RPS10P5 TRMT1L APOL2 NCKAP1L

2.37e-0475915416int:RICTOR
InteractionEFTUD2 interactions

RRP1B PUF60 KIF21A POLR2A RPS10 USP24 SRP9 CCT4 RFC1 TRIM24 RUFY1 CUL5 BMI1 DAP3 BRF1 DNAJA4 MRPS21 GNL2 EIF3A TRMT1L SNRPD1 COPS5 HSPA14 SYMPK

2.66e-04144915424int:EFTUD2
InteractionKLHL18 interactions

GPS1 CUL5 NEDD9 COPS5

2.66e-04411544int:KLHL18
InteractionAPEX1 interactions

NR2C1 GCFC2 DDX49 RRP1B PUF60 IFT74 ESR2 MAU2 RFC1 TRIM24 BLM THADA TIMM10 BRF1 GSE1 DROSHA MAD1L1 PKD1 GNL2 TUBD1 SNRPD1 WWC1

2.69e-04127115422int:APEX1
InteractionCIRBP interactions

CUL4B DOCK3 PLEKHG7 ESR2 CUL5 BMI1 COPS5

2.71e-041641547int:CIRBP
InteractionAKAP6 interactions

AKAP6 PDE4A PDE4D

2.75e-04171543int:AKAP6
InteractionTOP1 interactions

CUL4B RBM15 RRP1B POLR2A MAU2 RFC1 TRIM24 GATAD2B MTOR EIF3A FH TUBD1 SNRPD1 COPS5 SYMPK

2.95e-0469615415int:TOP1
InteractionKDM1A interactions

NR2C1 IFT74 ESR2 POLR2A VPS50 ATG2B USP24 CAGE1 TRIM24 RUFY1 PHC1 PHC2 ZBP1 BMI1 PHC3 GSE1 ZNF532 SYMPK

3.14e-0494115418int:KDM1A
InteractionINSYN1 interactions

IFT74 VPS50 CREB5 BLOC1S6 CENPH PLD2 PIBF1

3.25e-041691547int:INSYN1
InteractionTERF2IP interactions

NR2C1 SFSWAP PUF60 ESR2 RFC1 TRIM24 GATAD2B PHC1 RPP25 BLM PHC3 CLSPN SYMPK

3.29e-0455215413int:TERF2IP
InteractionCBX6 interactions

RRP1B RPS10 PHC1 PHC2 BMI1 DAP3 PHC3 PTCD1 TRMT1L

3.36e-042831549int:CBX6
InteractionBCAR1 interactions

GCFC2 KIF21A POLR2A ATG2B TRIM29 PHC2 CUL5 NEDD9 MTOR CENPH PKD1 TRMT1L GARRE1

3.52e-0455615413int:BCAR1
InteractionPOC1A interactions

POTEF ATG2B CCT4 DAP3 BLOC1S6 CENPH

3.52e-041221546int:POC1A
InteractionMLLT1 interactions

ESR2 POLR2A MAU2 TRIM24 BMI1 BTK

3.68e-041231546int:MLLT1
InteractionMRM1 interactions

UBR1 RRP1B ESR2 BMI1 DAP3 PTCD1 MRPS21 TRMT1L GFM1 MTRF1L

3.70e-0435015410int:MRM1
InteractionNLE1 interactions

RRP1B ESR2 CCT4 BLM ZNF532 GNL2 TRMT1L CLSPN

3.76e-042281548int:NLE1
InteractionGLI4 interactions

CENPB RPS10 TSPYL2 DAP3 PTCD1 GNL2

4.01e-041251546int:GLI4
InteractionZGPAT interactions

ESR2 GATAD2B PHC2 MIPOL1 UPF2 GNL2 SNRPD1

4.16e-041761547int:ZGPAT
InteractionRYBP interactions

ESR2 F8 PHC1 PHC2 BMI1 PHC3 PTCD1 PIBF1

4.22e-042321548int:RYBP
InteractionRPS3 interactions

CUL4B ESR2 RPS10 SRP9 MBD6 TRIM24 RUFY1 CUL5 BMI1 PHC3 BTK GNL2 EIF3A RPS10P5 COPS5

4.28e-0472115415int:RPS3
InteractionH2AC8 interactions

CUL4B RPS10 CUL5 DAP3 TIMELESS CLSPN COPS5

4.30e-041771547int:H2AC8
InteractionH3C3 interactions

NR2C1 RRP1B RFC1 TRIM24 GATAD2B PHC1 BLM BMI1 DAP3 PHC3 GNL2 TIMELESS

4.32e-0449515412int:H3C3
InteractionPARP1 interactions

NR2C1 DDX49 CENPB RRP1B LEMD3 POLR2A RFC1 MBD6 TRIM29 GATAD2B PHC1 BLM BMI1 PHC3 BRF1 MTOR GNL2 TIMELESS TRMT1L CLSPN TUBD1 COPS5

4.34e-04131615422int:PARP1
InteractionARL16 interactions

SFSWAP CCT4 BLM DCLRE1A CLSPN

4.39e-04831545int:ARL16
InteractionSRP9 interactions

RRP1B POLR2A RPS10 SRP9 RFC1 BLM BMI1 GNL2 EIF3A CLSPN SNRPD1

4.54e-0442715411int:SRP9
InteractionACTBL2 interactions

CUL4B POTEF ESR2 CCT4 TRIM24 CUL5 POTEE POTEI COPS5

4.65e-042961549int:ACTBL2
InteractionDOT1L interactions

RBM15 SFSWAP RRP1B PUF60 RPS10 TSPYL2 SRP9 CCT4 BRINP1 RFC1 DROSHA GNL2 EIF3A TRMT1L SNRPD1 SYMPK

4.66e-0480715416int:DOT1L
InteractionWDR77 interactions

CUL4B ESR2 RPS10 CCT4 MAU2 RUFY1 GATAD2B TIMELESS RPS10P5 SNRPD1

4.71e-0436115410int:WDR77
InteractionTACSTD2 interactions

ESR2 FASTKD1 PHC3 THADA MTOR TIMELESS

4.74e-041291546int:TACSTD2
InteractionRPL26L1 interactions

CUL4B RRP1B ESR2 RPS10 SRP9 RUFY1 BLM CUL5 GNL2 TRMT1L COPS5

4.90e-0443115411int:RPL26L1
InteractionIGHM interactions

ESR2 BCKDK USP24 TIMM10 MTOR SYMPK

4.94e-041301546int:IGHM
InteractionCAND1 interactions

CUL4B DOCK3 HTR2C SFSWAP PUF60 ESR2 POLR2A RPS10 RUFY1 BLM CUL5 BMI1 MRPS21 GNL2 TRMT1L SNRPD1 COPS5

4.96e-0489415417int:CAND1
InteractionILF3 interactions

CUL4B RRP1B LEMD3 POLR2A MBD6 TRIM24 CUL5 BMI1 DAP3 PTCD1 DROSHA MAD1L1 GNL2 EIF3A TRMT1L SNRPD1 COPS5

5.08e-0489615417int:ILF3
InteractionPHC3 interactions

ESR2 PHC1 PHC2 BMI1 PHC3

5.17e-04861545int:PHC3
InteractionNBN interactions

CUL4B ESR2 RFC1 TRIM29 BLM BMI1 MTOR

5.25e-041831547int:NBN
InteractionRCBTB1 interactions

DSCAM CUL5 COPS5

5.26e-04211543int:RCBTB1
InteractionLRRC25 interactions

DMXL2 POTEF VPS50 ARFGEF2 THADA MTOR CENPH

5.60e-041851547int:LRRC25
GeneFamilyAnkyrin repeat domain containing|POTE ankyrin domain containing

POTEF POTEE POTEI

3.99e-0513963685
GeneFamilyAnkyrin repeat domain containing

POTEF NFKBIZ PSMD10 POTEE ANKRD2 POTEI ANKS3

3.06e-04242967403
GeneFamilyCullins

CUL4B CUL5

7.65e-0489621032
GeneFamilyCOP9 signalosome

GPS1 COPS5

9.80e-049962932
GeneFamilySterile alpha motif domain containing

PHC1 PHC2 PHC3 ANKS3

1.24e-0388964760
GeneFamilyHelix-turn-helix CENPB type domain containing

CENPB TIGD3

2.09e-0313962533
GeneFamilyDyneins, axonemal

DNAH8 DNAH9

3.60e-0317962536
CoexpressionGSE1460_INTRATHYMIC_T_PROGENITOR_VS_THYMIC_STROMAL_CELL_UP

FASTKD1 USP24 RFC1 ADA2 DAP3 THADA TIMELESS FH TUBD1

3.06e-061981569M3449
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#4

FNIP2 CUL4B NR2C1 KIF21A POLR2A USP24 RTN3 TRIM24 CLIP1 CUL5 UPF2 MAD1L1 GNL2 TIGD3 PRKAG2 CLSPN

5.50e-0659515116Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K4
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5

UBR1 NR2C1 KIF21A POLR2A USP24 ARFGEF2 RTN3 NFKBIZ TRIM24 CLIP1 CREB5 UPF2 GNL2 EIF3A PRKAG2 CLSPN

1.10e-0562915116Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

CUL4B GCFC2 TTC41P RRP1B IFT74 KIF21A VPS50 ARFGEF2 RFC1 TRIM24 CLIP1 CREB5 PHC1 BLM CUL5 UPF2 CENPH MAD1L1 GNL2 EIF3A FH CLSPN PIBF1

2.79e-05125715123facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_1000

ABCA13 FASTKD1 PAQR5 ARFGEF2 JMY GATAD2B CUL5 BLOC1S6 PIBF1 GARRE1 WWC1

8.76e-0537915111gudmap_developingKidney_e15.5_1000_k3
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

CUL4B DOCK3 GCFC2 TTC41P RRP1B IFT74 KIF21A VPS50 ARFGEF2 RFC1 TRIM24 CLIP1 CREB5 PHC1 BLM CUL5 UPF2 CENPH MAD1L1 GNL2 EIF3A FH CLSPN PIBF1

9.89e-05145915124facebase_RNAseq_e10.5_Emin_LatNas_2500
ToppCellsaliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_B-B_cell-B_c01-TCL1A|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PDE4D DCDC1 PLEKHG7 KIF21A FHAD1 DIP2C POTEI CADPS2

1.45e-0716815689a8709d34865cfa668d8f3335dc34fc86fc32482
ToppCellLPS_only-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS_only / Treatment groups by lineage, cell group, cell type

KIF21A TSPYL2 TRIM24 SMYD4 UNC5CL PIBF1 CADPS2 WWC1

4.88e-0719715681a1bee8da6e04b65935c40373eaee4d6c046d9a1
ToppCellLPS_IL1RA_TNF-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

KIF21A TSPYL2 TRIM24 SMYD4 UNC5CL PIBF1 CADPS2 WWC1

5.47e-072001568e8db082aa4d0597500e4f16a5c0ea3e62c6c59ae
ToppCellhuman_hepatoblastoma-Tumor_cells-T6|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

STARD13 DOCK3 CPA6 PDE4D ESR2 PLCB4 CTNNA2

3.32e-06179156714fc8ccb6b215063d747643f47d780d2b237eb67
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_principal_cell-Outer_Medullary_Collecting_Duct_Principal_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

STARD13 CPAMD8 PDE4D RTN3 ASPA PRKAG2 CADPS2

4.12e-061851567d602a9b35e86e6f2a14a58e40fc4fb97f5fa3b08
ToppCellRV-15._Ventricular_Cardiomyocyte_III|RV / Chamber and Cluster_Paper

AKAP6 FNIP2 PDE4D CREB5 ANKRD2 DIP2C PRKAG2

4.91e-06190156793c3188dfeb0b2f9889f8ae9b9c1f2f34129c99b
ToppCellwk_20-22-Epithelial-Proximal_epithelial-MUC16+_ciliated|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

DCDC1 ABCA13 KIF21A FHAD1 DNAJA4 CRACDL DNAH9

5.63e-061941567756082a0f5953b52229bb60d40b84701cb6cb23d
ToppCellIPF-Multiplet-Multiplet|IPF / Disease state, Lineage and Cell class

PDE4D DCDC1 CRACDL PLCB4 CADPS2 DNAH9 WWC1

5.82e-061951567fce0c29574bb7aab181b9c00feb42681e285d1f2
ToppCellIPF-Multiplet|IPF / Disease state, Lineage and Cell class

PDE4D DCDC1 CRACDL PLCB4 CADPS2 DNAH9 WWC1

5.82e-061951567eacc0449ae6f3ad8002268cd061467684c6fb9a7
ToppCellCOPD-Multiplet-Multiplet|COPD / Disease state, Lineage and Cell class

PDE4D DCDC1 ABCA13 PLCB4 CLSPN DNAH9 WWC1

6.02e-061961567af4cdc61830685a888a1209826c23bcf54a43084
ToppCellCOPD-Multiplet|COPD / Disease state, Lineage and Cell class

PDE4D DCDC1 ABCA13 PLCB4 CLSPN DNAH9 WWC1

6.02e-0619615676d02d494196e3f857d53eea46d9419690d43beca
ToppCellLPS_anti-TNF-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

KIF21A TSPYL2 TRIM24 SMYD4 UNC5CL CADPS2 WWC1

6.22e-0619715671485933986921ff45669d9b7501c8d17050b3e97
ToppCellLPS_IL1RA-Epithelial_alveolar-AT_2-Differentiating_AT2|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

KIF21A TSPYL2 SMYD4 UNC5CL PIBF1 CADPS2 WWC1

6.43e-061981567285f729140b1df029c24f6ca1d2438470ac51794
ToppCellLPS_only-Epithelial_alveolar|LPS_only / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 NEDD9 FOXP4 PIBF1 CADPS2 WWC1

6.43e-061981567655df75b9692d815c7f6910275e1f684ac63bf62
ToppCellLPS_only-Epithelial_alveolar-AT_1-Differentiating_AT1|LPS_only / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 NEDD9 FOXP4 UNC5CL CADPS2 WWC1

6.87e-0620015672dadf317a42a7e27cc1fac74f91b806c93a57108
ToppCellLPS_only-Epithelial_alveolar-AT_1|LPS_only / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 NEDD9 FOXP4 UNC5CL CADPS2 WWC1

6.87e-0620015679a6ae40f3e17cd44ee5fd73260713b920aa2ea15
ToppCellfacs-Diaphragm-Limb_Muscle-24m|Diaphragm / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DSCAM ABCA13 POLR2A RPS10 RYR3 DNAH9

2.93e-05169156612bdc709bc000d7f9061ecd9fbd57233eaacb7e2
ToppCellChildren_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_2/Club-like_(AT2/Club-like)-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

FNIP2 CPAMD8 PDE4D ESR2 CADPS2 WWC1

3.92e-051781566f5ed4a6e3eb8056b1be1fb311021710c95bdf888
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

CPAMD8 DCDC1 ABCA13 NEDD9 VPS41 WWC1

4.30e-0518115666a6bd8e020cb0929b6ecdcb55d467ad24fecfaf0
ToppCellCOVID-19-Heart-CM_3|Heart / Disease (COVID-19 only), tissue and cell type

AKAP6 FNIP2 DOCK3 CREB5 DNAJA4 ANKRD2

4.43e-051821566287fcc3897ae08841f6f85ae6c9cef16f75b1dd1
ToppCellpdx-Tumor_cells-T6|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

STARD13 CPA6 PDE4D NEDD9 PLCB4 CTNNA2

4.43e-0518215667b24a4f712e1ae1525e8f1c8ec4e1fc43489cbee
ToppCell3'-GW_trimst-1.5-SmallIntestine-Neuronal-neuron_precursor-cycling_neuroblast|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

GCFC2 DCDC1 KIF21A BHMT BLM CLSPN

4.43e-051821566e6968e0bd9cef92052d04ac54e2dd746b37623f6
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

POLR2A RPS10 NFKBIZ TRIM29 CLIP1 EIF3A

4.86e-051851566eb7d3c1363d5fedc611f9c1a91ea823de251355e
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

STARD13 CPAMD8 PDE4D PRKAG2 CADPS2 VWA5B1

5.16e-0518715662d17408b3b5f09d135084fd7ccce98e6b5ca632b
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KIF21A NFKBIZ CLIP1 CREB5 GATAD2B EIF3A

5.31e-051881566d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCelldroplet-Lung-3m-Hematologic-Lymphocytic_NK_ILC-natural_killer_cell-proliferating_NK|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SERP2 BLM CENPH DCLRE1A TIMELESS CLSPN

5.31e-0518815660ec2a1b0505501ba18f10a5fce68c306a6292419
ToppCellCOPD-Multiplet-Multiplet|World / Disease state, Lineage and Cell class

PDE4D KIF21A TIMELESS CLSPN DNAH9 WWC1

5.31e-051881566186fe1ea328c942910190a4240262c0d8642ea3b
ToppCellRV-15._Ventricular_Cardiomyocyte_III|World / Chamber and Cluster_Paper

AKAP6 FNIP2 PDE4D ANKRD2 DIP2C PRKAG2

5.47e-0518915660a82931b5f6c0a6427ca3edd5e2235ac49099d40
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Glutamatergic_Excit|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

PDE4D DSCAM BRINP1 CRACDL PRKAG2 CADPS2

5.63e-05190156649e09cdb843b3d889a06a811aa5affae68b25a75
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK3 DCDC1 ABCA13 NEDD9 VPS41 WWC1

5.80e-051911566d0e9afe7b6334dd515d3e68892efdc76347a55e5
ToppCellRA-09._Endothelium_I|World / Chamber and Cluster_Paper

CPAMD8 F8 NEDD9 CRACDL CADPS2 GARRE1

5.80e-051911566c8a0c2af119bc34a8f694a7d30642f28002c84b9
ToppCellRA-09._Endothelium_I|RA / Chamber and Cluster_Paper

CPAMD8 F8 NEDD9 CRACDL CADPS2 GARRE1

5.97e-0519215668a1b1c3e83a68ad74f8f4eb00455c9e41aa57cfc
ToppCellNS-moderate-d_0-4|moderate / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

AKAP6 DCDC1 ABCA13 FHAD1 CRACDL DNAH9

6.14e-051931566ea345d34440b25f65358a53dc72831998d1c3620
ToppCellhuman_hepatoblastoma-Tumor_cells|human_hepatoblastoma / Sample and Cell Type and Tumor Cluster (all cells)

VIL1 POTEF KIF21A ARFGEF2 TRIM24 GPC3

6.14e-051931566503a979328c68b096680b71359a26f02fafdff35
ToppCellControl-Myeloid-Macrophage|Myeloid / Disease state, Lineage and Cell class

FNIP2 STARD13 DMXL2 PDE4D PRKAG2 PID1

6.14e-0519315662a6d531abd34df20941cf3dac4fdfb1621a1bde6
ToppCellRV-09._Endothelium_I|RV / Chamber and Cluster_Paper

CPAMD8 F8 NEDD9 CRACDL CADPS2 GARRE1

6.32e-0519415667b408096e717f2327c12aea35a8d5fc4621d3b06
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Intermediate_tubule_epithelial_cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

CPAMD8 DCDC1 ABCA13 CREB5 ITPR3 WWC1

6.32e-051941566e577d9e88390b36b5a09b97fe1026089892275a3
ToppCell5'-Parenchyma_lung-Immune_Myeloid-Myeloid_monocytic-non-classical_monocyte-Non-classical_monocytes-Non-classical_monocytes_L.1.2.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DMXL2 NFKBIZ ADA2 LYST CREB5 NCKAP1L

6.32e-051941566dfe0ece81922bfd7c6673726d3ea2365cbdb5513
ToppCellHealthy-Classical_Monocyte|World / disease group, cell group and cell class

DMXL2 NFKBIZ ADA2 LYST CREB5 PID1

6.50e-0519515660d96f456cc84ebb2543406fb2374c6d7cedd3c4d
ToppCellLA-09._Endothelium_I|World / Chamber and Cluster_Paper

CPAMD8 F8 NEDD9 CRACDL CADPS2 GARRE1

6.50e-051951566fc95457a298b5d0dab687d9ee7e225a7f7b9a0d4
ToppCellControl-Classical_Monocyte-cMono_2|Control / Disease condition and Cell class

DMXL2 RTN3 NFKBIZ ADA2 CREB5 EIF3A

6.50e-0519515660fea64ee3eedf3929abb0dd9c5f5fc72f181eed9
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DCDC1 ABCA13 PLEKHG7 FHAD1 CRACDL DNAH9

6.50e-0519515669651ee03738226ee10e901f8b9ec6a417eb9c301
ToppCellLPS_IL1RA-Epithelial_alveolar-AT_1-Differentiating_AT2|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

KIF21A MROH5 NEDD9 UNC5CL CADPS2 WWC1

6.88e-051971566b94645d57efe8d9e032bffb8c89af1f425c6421e
ToppCellControl-Classical_Monocyte-cMono_2|Classical_Monocyte / Disease condition and Cell class

DMXL2 NFKBIZ ADA2 LYST EIF3A NCKAP1L

6.88e-051971566eb7610c9496a95a5fd866e16abcbc39b83abe617
ToppCellLA-09._Endothelium_I|LA / Chamber and Cluster_Paper

CPAMD8 F8 NEDD9 CRACDL CADPS2 GARRE1

6.88e-051971566ab6d1ab586a188597a39854ef980b8955ebcc645
ToppCellLPS_anti-TNF-Epithelial_alveolar-AT_1-2_Progenitor-AT2_Progenitor|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 FOXP4 PIBF1 CADPS2 WWC1

7.07e-05198156682bcd44f8744e7e8477fbfd871a52f3d1a8b3adc
ToppCellCOPD-Myeloid-Macrophage|Myeloid / Disease state, Lineage and Cell class

FNIP2 STARD13 DMXL2 CREB5 PRKAG2 PID1

7.27e-0519915661cf1b2d6debf9e3389f1829dcaa2857e9533a080
ToppCellLPS_only-Epithelial_alveolar-AT_1-2_Progenitor|LPS_only / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 NEDD9 PIBF1 CADPS2 WWC1

7.27e-0519915663a0af1a13b1760f4213d87d0958dbe3bf3b9a42b
ToppCellcritical-Myeloid-Non-resident_Macrophage|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

FNIP2 DMXL2 MRAS ADA2 PID1 NCKAP1L

7.27e-051991566193325768b17d3123ae855317f381a01088b5dac
ToppCellLPS_only-Epithelial_alveolar-AT_1-2_Progenitor-Progenitor_AT1-AT2|LPS_only / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 NEDD9 FOXP4 PIBF1 WWC1

7.27e-0519915660447f8f53389fe7c6ddc04a97d86e74122ea16f4
ToppCellLPS_only-Epithelial_alveolar-AT_1-2_Progenitor-AT2_Progenitor|LPS_only / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 NEDD9 PIBF1 CADPS2 WWC1

7.27e-0519915667b21447bb39cdba37539a12cb475f463010fc23f
ToppCellIPF-Myeloid-Macrophage|Myeloid / Disease state, Lineage and Cell class

FNIP2 STARD13 DMXL2 MRAS PRKAG2 PID1

7.27e-0519915663c2b362d5e824e1a04830e70352f8818de984174
ToppCellTracheal-NucSeq|Tracheal / Cell types per location group and 10X technology with lineage, and cell group designations

STARD13 PDE4D FOCAD DIP2C PLCB4 CADPS2

7.27e-05199156694b94b17ca18b8dc27b91da1f2ccf89e03cc7035
ToppCellmoderate-Myeloid-Non-resident_Macrophage|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

FNIP2 DMXL2 PDE4A MRAS ADA2 PID1

7.27e-051991566614c1e788d89310e78984241977941beed8d12dc
ToppCellLPS_IL1RA_TNF-Epithelial_alveolar|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

KIF21A TRIM24 FOXP4 PIBF1 CADPS2 WWC1

7.48e-052001566c89f3cb36bb14c476d6a392bfd3ded1c8feecfeb
ToppCellTracheal-10x3prime_v2-Epithelial|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

ABCA13 KIF21A TRIM29 FHAD1 DNAJA4 DNAH9

7.48e-052001566e1da1b15d2ca06796ee1ab7cef586ae0b4dc0a0a
ToppCellNeuronal-Excitatory|Neuronal / cells hierarchy compared to all cells using T-Statistic

PDE4D DSCAM BRINP1 CRACDL PRKAG2 CADPS2

7.48e-0520015664409065bc7aa995354c71e0f9d6f3726cf393d6b
ComputationalNeighborhood of AATF

DDX49 SFSWAP PUF60 POLR2A CCT4 SERP1 DAP3 MTOR GNL2 COPS5

3.04e-0520910310MORF_AATF
DiseaseMalignant neoplasm of breast

AKAP6 ESR2 ARFGEF2 TRIM29 RUFY1 CLIP1 CUL5 DAP3 FOXP4 ZNF532 MTOR BTK DIP2C TIMELESS PLD2 CLSPN DNAH9 HSPA14

1.03e-05107415118C0006142
Diseaseautism spectrum disorder (implicated_via_orthology)

HTR2C DSCAM BCKDK BRINP1 ITPR3 CADPS2

1.36e-041521516DOID:0060041 (implicated_via_orthology)
Diseaseautosomal dominant polycystic kidney disease (is_implicated_in)

MTOR PKD1

1.55e-0441512DOID:898 (is_implicated_in)
Diseasedisease progression measurement

POLR2A TRIM29 RYR3 EIF3A

2.74e-04611514EFO_0008336
Diseasered blood cell density measurement

STARD13 VIL1 DCDC1 ESR2 ARFGEF2 RFC1 PHC2 MIPOL1 FOCAD BRF1 CEP78 PRKAG2 PIBF1

6.17e-0488015113EFO_0007978
Diseaseretinal detachment, retinal break

CPAMD8 SFSWAP TRIM29

7.62e-04351513EFO_0005773, EFO_0010698
Diseasetestosterone measurement

STARD13 DOCK3 VIL1 UBR1 PDE4A MIA3 MRAS DCDC1 DSCAM ESR2 POLR2A MAU2 NEDD9 FHAD1 THADA UGT2B10

8.62e-04127515116EFO_0004908
DiseaseMesothelioma

PUF60 GPC3 MTOR

1.21e-03411513C0025500
Diseaseceramide measurement

STARD13 PDE4D ESR2 SERP2 MAU2 PHC1

1.37e-032351516EFO_0010222
Diseasenucleus accumbens volume change measurement

DSCAM WWC1

1.39e-03111512EFO_0021493
DiseaseSitus Inversus

DNAH9 ANKS3

1.39e-03111512C0037221
DiseaseAshkenazi Jewish disorders

BLM ASPA

1.39e-03111512cv:CN118946
Diseasemean corpuscular hemoglobin concentration

VIL1 ACTRT3 POTEF POLR2A ARFGEF2 MAU2 RFC1 MIPOL1 FOCAD BRF1 UGT2B10 PRKAG2 CLSPN PIBF1

1.67e-03110515114EFO_0004528
Diseaseschizophrenia, anorexia nervosa

MAU2 CREB5 MAD1L1

1.92e-03481513MONDO_0005090, MONDO_0005351
Diseaseamygdala volume

PDE4D MTRF1L

1.96e-03131512EFO_0006934
Diseaseextracellular matrix protein 1 measurement

MIA3 MRPS21

1.96e-03131512EFO_0008126
Diseasechronotype measurement

DOCK3 GCFC2 MRAS ESR2 KIF21A STK31 CLIP1 FOXP4 DIP2C PLCB4 TUBD1 MTRF1L

2.00e-0388215112EFO_0008328
Diseaseprostate carcinoma

RBM15 ESR2 GATAD2B MIPOL1 NEDD9 DAP3 PHC3 FOXP4 THADA UPF2 MAD1L1 DIP2C

2.17e-0389115112EFO_0001663
Diseasecognitive function measurement, self reported educational attainment

AKAP6 DMXL2 PDE4D PLEKHG7 ARFGEF2 STK31 GATAD2B

2.42e-033551517EFO_0004784, EFO_0008354
DiseaseDown syndrome (implicated_via_orthology)

DSCAM DYRK1B

2.61e-03151512DOID:14250 (implicated_via_orthology)
Diseaseplatelet storage pool deficiency (implicated_via_orthology)

LYST BLOC1S6

2.61e-03151512DOID:2223 (implicated_via_orthology)
DiseaseAase Smith syndrome 2

RPS10 ADA2

2.61e-03151512C2931850
DiseaseSmall cell carcinoma of lung

KIF21A STK31 DIP2C

2.69e-03541513C0149925
DiseaseSeasonal Affective Disorder

PDE4A HTR2C

2.98e-03161512C0085159
DiseaseN-acetyl-beta-alanine measurement

RYR3 VPS35L

2.98e-03161512EFO_0021430
Diseaseautosomal recessive polycystic kidney disease (implicated_via_orthology)

MTOR PKD1

2.98e-03161512DOID:0110861 (implicated_via_orthology)
Diseasesphingomyelin 14:0 measurement

PDE4D THADA

3.36e-03171512EFO_0010390
DiseaseColorectal Carcinoma

AKAP6 CPAMD8 ABCA13 ESR2 BRINP1 BRF1 GSE1 CENPH DIP2C DNAH8

3.40e-0370215110C0009402
DiseaseCocaine Abuse

HTR2C ESR2 APOL2 DNAH8

4.19e-031271514C0009171
DiseaseCoronary Arteriosclerosis

MIA3 MRAS ESR2

4.55e-03651513C0010054
DiseaseCoronary Artery Disease

MIA3 MRAS ESR2

4.55e-03651513C1956346
Diseaseurate measurement, bone density

AKAP6 DSCAM CLIP1 NEDD9 GSE1 CTNNA2 CADPS2 DNAH8 DNAH9

4.72e-036191519EFO_0003923, EFO_0004531
Diseasecortical thickness

AKAP6 FNIP2 CPAMD8 DCDC1 ARFGEF2 SERP2 SERP1 MBD6 RUFY1 GATAD2B THADA PKD1 PRKAG2

4.83e-03111315113EFO_0004840

Protein segments in the cluster

PeptideGeneStartEntry
MKEGLEAARLKAHLM

BHMT

231

Q93088
KISALALLKMVMHAR

COPS5

56

Q92905
HKRILKFLQLFMSDM

PRKAG2

401

Q9UGJ0
ELRKALNKLASHMVM

APOL2

51

Q9BQE5
LMAKRMSLILHVQKL

C1orf167

81

Q5SNV9
SQLASKMHSLLALMV

CAGE1

611

Q8TC20
KRNETEKLHLMFSLM

CUL5

286

Q93034
QLKTIVMATKMAALH

NEDD9

786

Q14511
LTLKSNKNRMDFIHM

BRINP1

526

O60477
AKVMMNLSHEKLVQL

BTK

446

Q06187
LMKNHGIMLLSASDR

ACTRT3

191

Q9BYD9
LVEMLRAMKQKALSA

GSE1

886

Q14687
NILVIMAVSMEKKLH

HTR2C

71

P28335
TLLSNFKMHLKMQIE

ARFGEF2

461

Q9Y6D5
SRALNFTKHLLMMEK

ABCA13

706

Q86UQ4
IITKKDVLRHMAQMA

CLCN4

736

P51793
VRLHDKMKVDMSGLQ

CCDC144CP

761

Q8IYA2
VFQRRGHDLIMKMKI

DNAJA4

251

Q8WW22
IRKNPLIDHSMMKAV

CEP78

291

Q5JTW2
SVLMKRNLHNVKRMT

DMXL2

2756

Q8TDJ6
LLKNAMRATMESHLD

BCKDK

276

O14874
TMLAVKNITMHLLKK

CPA6

421

Q8N4T0
LRLLELMNQHDTEMK

DYRK1B

156

Q9Y463
MPRKAHSNMLTVKAL

ATG2B

1671

Q96BY7
MILVANKVDLMHLRK

MRAS

121

O14807
MHLRKITREQGKEMA

MRAS

131

O14807
MSHRAKLAMSGKIII

RBM15

426

Q96T37
KMSTERRKLLMEHIF

NR2C1

466

P13056
LLKNMDAHKVMLDLL

ITPR3

1196

Q14573
HMQMEAILLDKTLRK

PAQR5

266

Q9NXK6
LMMNTLYKLHDRLAQ

LEMD3

526

Q9Y2U8
QPMHSEAKMRLKAAL

CREB5

226

Q02930
AMLRLELDTMKHQSQ

POTEF

656

A5A3E0
LADLDTMRHKMRQLK

DCDC1

1571

M0R2J8
DMTKLCNHRRKAVAM

MBD6

96

Q96DN6
MKQSKLPMSLLHDRI

GNL2

111

Q13823
YVLARKMNALHMLDI

NFKBIZ

461

Q9BYH8
KMQMELSHKRARVEL

MAD1L1

71

Q9Y6D9
MSLTKLADKELVHMI

ESR2

296

Q92731
MMRAKEICLEQRKHA

JMY

491

Q8N9B5
LQTDKMMRAAAKDVH

WWC1

1061

Q8IX03
IARAKHMEMSLKVLE

MIPOL1

196

Q8TD10
LKHINQLLRTMSMPK

GPC3

466

P51654
TVMHLRKFLRSKMDI

BMI1

171

P35226
MVAALRKKHADSMAE

MYH8

1191

P13535
LEAKKLAHAMMEAFR

PID1

206

Q7Z2X4
MAQVRALHKIMALFS

OR52B6

1

Q8NGF0
EMASHKFKRMLNREL

PDE4A

256

P27815
SKHMNLLADLKTMVE

PDE4D

576

Q08499
KAMMLRAAVLRNQIH

GPS1

451

Q13098
VKSRLIKMGHLNSMN

DNAH8

4241

Q96JB1
ELHKINLVVSKGMML

ABCC11

526

Q96J66
LAKVMNLIVFHSRML

NCKAP1L

511

P55160
MDKLHLNLTELALTM

NCKAP1L

676

P55160
LAKESERLQAMMAHL

FOXP4

356

Q8IVH2
HDRMLMDKNATALRL

F8

1066

P00451
GHEAMERLKMLALLK

GATAD2B

36

Q8WXI9
LLLLKEDHLMSAMNI

PHC3

951

Q8NDX5
VMMEKELHQLKRASY

CRACDL

921

Q6NV74
AMLRLELDTMKHQSQ

POTEE

656

Q6S8J3
IPDHARQLTKAMMRK

ECI1

246

P42126
IKLLLLHGADMMTKN

ANKRD2

296

Q9GZV1
HYRQAMLLKAMAALE

CENPB

336

P07199
IMKLRKDLTEAHSRM

FHAD1

1011

B1AJZ9
MILSTHRNAFKKIME

IFT74

506

Q96LB3
HDVTRLKRLIMMEKD

BLM

996

P54132
LHKKLIDQFQMMRAS

DOCK3

1611

Q8IZD9
ADMADVMRLLSHLKI

CTNNA2

141

P26232
RQSSVLMDNMKHLLE

CENPH

121

Q9H3R5
LMDNMKHLLELNKLI

CENPH

126

Q9H3R5
MHALLLKQAMTFMKR

GCFC2

351

P16383
EKALEHKNRMSRMLE

EIF3A

741

Q14152
MMIKNVLHSARLLGD

FH

411

P07954
ESHMNRLKSAIEKAM

FNIP2

341

Q9P278
QLLLDKHMGMKRYEV

CPAMD8

1591

Q8IZJ3
ADNLKLKTHTMLQLM

GARRE1

361

O15063
HMYLDNMTAKQLKLL

FASTKD1

466

Q53R41
QLHKRAEKIAVMLME

DIP2C

1006

Q9Y2E4
DETRAHLLLKEKMMR

ADA2

31

Q9NZK5
HLEQRLKLMASDMLE

CADPS2

1036

Q86UW7
YHAKLVNIRKEMLML

BLOC1S6

111

Q9UL45
VNIRKEMLMLHEKTS

BLOC1S6

116

Q9UL45
SEHLKALINSVMKIM

LYST

466

Q99698
LLMKMRSVANDELHV

LYST

2606

Q99698
RMLAKQYGHMKIVAL

ANKS3

206

Q6ZW76
VALHSMMKQKERFAA

DDX49

276

Q9Y6V7
SMERSLLADQKVHML

DCLRE1A

821

Q6PJP8
QRHLSKLFDNMAKMR

DNAH9

1626

Q9NYC9
LEMARKKMNSEISHR

CCDC144A

796

A2RUR9
KKVRLQRLARMHADM

GFM1

391

Q96RP9
KGMLLLMERKLQEVH

MAU2

191

Q9Y6X3
RIMKMRKTLSHNLLV

CUL4B

856

Q13620
AAHAKEMEALRAKLM

CLIP1

686

P30622
LIKAIMHLLQMQALK

FOCAD

101

Q5VW36
RSCLKQTLHKLEAMM

PKD1

2681

P98161
TAMHRAAAKGNLKMI

PSMD10

141

O75832
HLRTSVLLEQMMRKK

UPF2

721

Q9HAU5
RAMMKLTNSAEVAKH

HSPA14

256

Q0VDF9
QDGLLKMLSLVLMHK

MTOR

536

P42345
EKTYLRLLAAMNMLH

MROH5

871

Q6ZUA9
VHMRVKEGSKIRNLM

RPP25

36

Q9BUL9
KRLRDAKSLAEMLMS

DSCAM

1626

O60469
ELALVHNLRKMMKND

DAP3

286

P51398
MNAAMVHINRALKLI

RTN3

931

O95197
HMRKKGINTLINIMS

DROSHA

936

Q9NRR4
LLRLTAIMEKHSMSN

STARD13

621

Q9Y3M8
DLMAKVRAMLAASKN

SFSWAP

931

Q12872
IKVTKMDANVLMHLR

TRMT1L

351

Q7Z2T5
MRHVEKMCKADLSRN

TRIM29

421

Q14134
TKIMFKNLLQMHRLT

THADA

411

Q6YHU6
TLQRNLHRLKMKMQE

SMYD4

186

Q8IYR2
RKKMRVMSNLVEHNG

RRP1B

596

Q14684
RESKEMRAHQAKISM

PLCB4

1071

Q15147
SARHMVMQKLLRKQE

PUF60

446

Q9UHX1
SHMHLMAFRKISLKT

BMT2

311

Q1RMZ1
NLRHKLLELTQKMAM

MIA3

1621

Q5JRA6
MKKHLMLLSRAADSI

RFC1

901

P35251
LAMTKLRAKLYSMHL

MTRF1L

286

Q9UGC7
LMHMMKLSIKVLLQS

RUFY1

116

Q96T51
KMLGMLFHNIRNILK

PRAMEF20

186

Q5VT98
MVAKQRIRMANEKHS

SERP2

1

Q8N6R1
DLALHFLNKMKIMVI

CCT4

311

P50991
AMLRLELDTMKHQSQ

POTEI

656

P0CG38
HRMQKEIAALAPSML

POTEI

1011

P0CG38
ASHKAGLKDMLRMIA

AKAP6

851

Q13023
ILDQMRKMIKHALDF

ASPA

191

P45381
IHMKTMLDDDKRQLR

CLSPN

1101

Q9HAW4
NLAAKMEILKEMRHV

STK31

366

Q9BXU1
PNLHVMKAMQSLKSR

RPS10

41

P46783
RLLGKTQTAMDQLHM

VPS50

261

Q96JG6
LKHLRQMLISNAKME

TUBD1

296

Q9UJT1
VKMLHRLAHDLKMEA

TIMELESS

726

Q9UNS1
MLLHKAKELADIMGQ

TIGD3

101

Q6B0B8
KLMEVMNHVLGKRRE

VIL1

221

P09327
TFTKRLMLEKHVQLM

ZNF532

1096

Q9HCE3
LESLAKDHRMKLMQQ

TRIM24

331

O15164
LLLLKEDHLMSAMNI

PHC2

826

Q8IXK0
LSLLENMSKHTIMLR

TTC30B

591

Q8N4P2
VQDLRHISMGYKMKL

TSPYL2

296

Q9H2G4
LAMETRKVMKGNHSR

VPS35L

681

Q7Z3J2
RMKSRHLLDMDEQSK

ZBP1

146

Q9H171
PNLHVMKAMQSLKSR

RPS10P5

41

Q9NQ39
MAKHLKFIARTVMVQ

MRPS21

1

P82921
KLMMLQHKIRDTQLE

KIF21A

681

Q7Z4S6
ISIHLASAKERKLMM

RYR3

1611

Q15413
MVAKQRIRMANEKHS

SERP1

1

Q9Y6X1
LDRKHMTDRKLTMEQ

POLR2A

1216

P24928
HREELAAMKQILVKM

PIBF1

681

Q8WXW3
TMVRQLMHKLLVFSA

UNC5CL

91

Q8IV45
ARLHRQKIMAQMSAL

UBR1

1026

Q8IWV7
TKLNIFRKHLSIPMM

TTC41P

501

Q6P2S7
MKLVRFLMKLSHETV

SNRPD1

1

P62314
ALLLLKEEHLMSAMN

PHC1

971

P78364
ADSLSLLKKMHRTQM

VPS41

766

P49754
HEVSMTALRLLQRMK

BRF1

201

Q92994
IKHLARLMATQMTAA

SYMPK

446

Q92797
LLRMLKSPHFSAKMN

USP24

391

Q9UPU5
MNMKTILKELVQRGH

UGT2B10

36

P36537
DHLLVLKMIFMNTLR

PLEKHG7

306

Q6ZR37
KIEKFHSQLMRLMVA

SRP9

61

P49458
HSQLMRLMVAKEARN

SRP9

66

P49458
IHERMGKKLTELSMQ

TIMM10

61

P62072
HALLKMAAKCADLRM

PTCD1

251

O75127
SKRALMLLHPNIKVM

PLD2

416

O14939
SMHRVKDAMLVALKS

VWA5B1

376

Q5TIE3