Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionextracellular matrix structural constituent

COL6A3 PAPLN FRAS1 FN1

2.10e-05188184GO:0005201
GeneOntologyMolecularFunctionintegrin binding

SLC6A4 ADAM15 FN1

4.90e-04175183GO:0005178
GeneOntologyMolecularFunctionproteoglycan binding

PLA2G2D FN1

9.53e-0451182GO:0043394
GeneOntologyMolecularFunctionpeptidase regulator activity

COL6A3 PAPLN FN1

1.49e-03257183GO:0061134
GeneOntologyCellularComponentcollagen-containing extracellular matrix

ANGPTL7 COL6A3 PAPLN FRAS1 FN1

8.90e-05530195GO:0062023
GeneOntologyCellularComponentbasement membrane

PAPLN FRAS1 FN1

1.76e-04122193GO:0005604
GeneOntologyCellularComponentextracellular matrix

ANGPTL7 COL6A3 PAPLN FRAS1 FN1

2.42e-04656195GO:0031012
GeneOntologyCellularComponentexternal encapsulating structure

ANGPTL7 COL6A3 PAPLN FRAS1 FN1

2.45e-04658195GO:0030312
Domain-

COL6A3 PAPLN

1.33e-04181824.10.410.10
DomainPrtase_inh_Kunz-CS

COL6A3 PAPLN

1.33e-0418182IPR020901
DomainKU

COL6A3 PAPLN

1.33e-0418182SM00131
DomainBPTI_KUNITZ_2

COL6A3 PAPLN

1.49e-0419182PS50279
DomainKunitz_BPTI

COL6A3 PAPLN

1.49e-0419182PF00014
DomainBPTI_KUNITZ_1

COL6A3 PAPLN

1.49e-0419182PS00280
DomainKunitz_BPTI

COL6A3 PAPLN

2.19e-0423182IPR002223
DomainEGF

ADAM15 FRAS1 NOTCH2

1.40e-03235183SM00181
DomainEGF-like_dom

ADAM15 FRAS1 NOTCH2

1.65e-03249183IPR000742
DomainEGF_1

ADAM15 NOTCH2 FN1

1.76e-03255183PS00022
DomainEGF-like_CS

ADAM15 NOTCH2 FN1

1.88e-03261183IPR013032
DomainGrowth_fac_rcpt_

FRAS1 NOTCH2

9.71e-03156182IPR009030
PathwayREACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX

COL6A3 ADAM15 FN1

1.39e-04114133MM14571
PathwayPID_INTEGRIN_A9B1_PATHWAY

ADAM15 FN1

2.33e-0425132M118
PathwayREACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX

COL6A3 ADAM15 FN1

2.55e-04140133M587
PathwayWP_MIRNA_TARGETS_IN_ECM_AND_MEMBRANE_RECEPTORS

COL6A3 FN1

6.94e-0443132M39565
PathwayREACTOME_ECM_PROTEOGLYCANS

COL6A3 FN1

8.29e-0447132MM14925
Pubmed

The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices.

COL6A3 PAPLN FRAS1 FN1

1.88e-0616719422159717
Pubmed

Proteomics analysis of cardiac extracellular matrix remodeling in a porcine model of ischemia/reperfusion injury.

COL6A3 FRAS1 FN1

5.64e-066419322261194
Pubmed

Mapping of Col3a1 and Col6a3 to proximal murine chromosome 1 identifies conserved linkage of structural protein genes between murine chromosome 1 and human chromosome 2q.

COL6A3 FN1

7.90e-0681921981051
Pubmed

Fras1 deficiency results in cryptophthalmos, renal agenesis and blebbed phenotype in mice.

COL6A3 FRAS1

7.90e-06819212766770
Pubmed

Two NOD Idd-associated intervals contribute synergistically to the development of autoimmune exocrinopathy (Sjögren's syndrome) on a healthy murine background.

COL6A3 FN1

1.02e-05919212115247
Pubmed

The extracellular matrix gene Frem1 is essential for the normal adhesion of the embryonic epidermis.

COL6A3 FRAS1

1.27e-051019215345741
Pubmed

A collagen VI-dependent pathogenic mechanism for Hirschsprung's disease.

COL6A3 FN1

1.86e-051219226571399
Pubmed

Identification and mapping of six microdissected genomic DNA probes to the proximal region of mouse chromosome 1.

COL6A3 FN1

1.86e-05121921358796
Pubmed

Identifications of novel host cell factors that interact with the receptor-binding domain of the SARS-CoV-2 spike protein.

PRSS3P2 WDR6 PAPLN FRAS1 DSTYK

2.10e-0565019538777146
Pubmed

Sprouty1 haploinsufficiency prevents renal agenesis in a model of Fraser syndrome.

FRAS1 FN1

2.96e-051519223064016
Pubmed

Breakdown of the reciprocal stabilization of QBRICK/Frem1, Fras1, and Frem2 at the basement membrane provokes Fraser syndrome-like defects.

COL6A3 FRAS1

3.38e-051619216880404
Pubmed

Collagen VI suppresses fibronectin-induced enteric neural crest cell migration by downregulation of focal adhesion proteins.

COL6A3 FN1

4.81e-051919229196262
Pubmed

Fras1, a basement membrane-associated protein mutated in Fraser syndrome, mediates both the initiation of the mammalian kidney and the integrity of renal glomeruli.

FRAS1 FN1

7.10e-052319218787044
Pubmed

Basement membrane assembly of the integrin α8β1 ligand nephronectin requires Fraser syndrome-associated proteins.

FRAS1 FN1

1.14e-042919222613833
Pubmed

Polymorphisms in genes involved in neurodevelopment may be associated with altered brain morphology in schizophrenia: preliminary evidence.

ADAM15 NOTCH2

1.22e-043019219054571
Pubmed

A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome.

COL6A3 RABGEF1 NOTCH2 FN1

1.35e-0449719423414517
Pubmed

The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment.

PLA2G2D ANGPTL7 PAPLN LHFPL1 ZDHHC24

1.51e-0498519512975309
Pubmed

Wnt5a and Wnt11 regulate mammalian anterior-posterior axis elongation.

NOTCH2 FN1

1.66e-043519225813538
Pubmed

Deletion of hypoxia-inducible factor prolyl 4-hydroxylase 2 in FoxD1-lineage mesenchymal cells leads to congenital truncal alopecia.

NOTCH2 FN1

3.14e-044819235247391
Pubmed

Comparative proteomic analysis of supportive and unsupportive extracellular matrix substrates for human embryonic stem cell maintenance.

COL6A3 FN1

3.41e-045019223658023
Pubmed

Prox1 ablation in hepatic progenitors causes defective hepatocyte specification and increases biliary cell commitment.

NOTCH2 FN1

3.41e-045019224449835
Pubmed

Leukodystrophy Overview – RETIRED CHAPTER, FOR HISTORICAL REFERENCE ONLY

GALC POLR3B

4.13e-045519224501781
Pubmed

BioID reveals an ATG9A interaction with ATG13-ATG101 in the degradation of p62/SQSTM1-ubiquitin clusters.

RABGEF1 NOTCH2 POLR3B

4.79e-0428519334369648
CoexpressionVERRECCHIA_EARLY_RESPONSE_TO_TGFB1

COL6A3 NOTCH2 FN1

7.82e-0654193M4737
CoexpressionYAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_16

WDR6 COL6A3 ADAM15

2.47e-0579193M18400
CoexpressionYAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_16

WDR6 COL6A3 ADAM15

2.56e-0580193MM1285
CoexpressionNABA_CORE_MATRISOME

COL6A3 PAPLN FRAS1 FN1

3.78e-05270194MM17057
CoexpressionNABA_CORE_MATRISOME

COL6A3 PAPLN FRAS1 FN1

4.06e-05275194M5884
CoexpressionNABA_MATRISOME

ANGPTL7 COL6A3 PAPLN ADAM15 FRAS1 FN1

5.62e-051008196MM17056
CoexpressionNABA_MATRISOME

ANGPTL7 COL6A3 PAPLN ADAM15 FRAS1 FN1

6.20e-051026196M5889
CoexpressionVERRECCHIA_RESPONSE_TO_TGFB1_C2

COL6A3 FN1

1.04e-0421192M4767
CoexpressionGSE10147_IL3_VS_IL3_AND_CPG_STIM_PDC_UP

TASP1 PAPLN LHFPL1

1.60e-04148193M348
CoexpressionURS_ADIPOCYTE_DIFFERENTIATION_DN

COL6A3 FN1

2.29e-0431192M18395
CoexpressionGSE6259_FLT3L_INDUCED_33D1_POS_DC_VS_CD4_TCELL_UP

PLA2G2D ADAM15 GALC

2.45e-04171193M6746
CoexpressionGSE6259_33D1_POS_VS_DEC205_POS_FLT3L_INDUCED_SPLENIC_DC_UP

RABGEF1 NOTCH2 FN1

2.62e-04175193M6723
CoexpressionGSE37301_HEMATOPOIETIC_STEM_CELL_VS_GRAN_MONO_PROGENITOR_DN

TASP1 RABGEF1 GALC

2.66e-04176193M8884
CoexpressionNABA_ECM_GLYCOPROTEINS

PAPLN FRAS1 FN1

3.39e-04191193MM17059
CoexpressionNABA_ECM_GLYCOPROTEINS

PAPLN FRAS1 FN1

3.65e-04196193M3008
CoexpressionGSE3982_MAC_VS_TH1_UP

RABGEF1 GALC POLR3B

3.82e-04199193M5510
CoexpressionGSE7852_LN_VS_THYMUS_TCONV_UP

TASP1 DSTYK NOTCH2

3.82e-04199193M5745
CoexpressionNABA_BASEMENT_MEMBRANES

COL6A3 PAPLN

3.82e-0440192M5887
CoexpressionGSE17721_0.5H_VS_8H_CPG_BMDC_UP

ADAM15 GALC FN1

3.88e-04200193M4126
CoexpressionGSE17721_POLYIC_VS_CPG_1H_BMDC_DN

SLC6A4 WDR6 RABGEF1

3.88e-04200193M3936
CoexpressionHALLMARK_EPITHELIAL_MESENCHYMAL_TRANSITION

COL6A3 NOTCH2 FN1

3.88e-04200193M5930
CoexpressionGSE17721_CPG_VS_GARDIQUIMOD_8H_BMDC_DN

TASP1 WDR6 ADAM15

3.88e-04200193M3893
ToppCellThalamus-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)|Thalamus / BrainAtlas - Mouse McCarroll V32

SLC6A4 PLA2G2D ANGPTL7

1.16e-05111183567e5ac2c78d45db207067f0f152bb24ed048c50
ToppCellThalamus-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)-|Thalamus / BrainAtlas - Mouse McCarroll V32

SLC6A4 PLA2G2D ANGPTL7

1.16e-05111183d1ec8e8e9adb11511b4ef363cc6f99286e2cc842
ToppCellThalamus-Hematopoietic-MACROPHAGE-MP1(C1qb)|Thalamus / BrainAtlas - Mouse McCarroll V32

SLC6A4 PLA2G2D ANGPTL7

1.16e-05111183fd7aa25e83a0d762969e3966a658652da40c490e
ToppCellThalamus-Hematopoietic-MACROPHAGE|Thalamus / BrainAtlas - Mouse McCarroll V32

SLC6A4 PLA2G2D ANGPTL7

1.16e-05111183d48561078c387ac856c1c30e3d7a3e75ebde942e
ToppCellThalamus-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)--|Thalamus / BrainAtlas - Mouse McCarroll V32

SLC6A4 PLA2G2D ANGPTL7

1.16e-05111183a1b7940c6fa0e5a58aa4798b604469d79f33fa44
ToppCellE18.5-samps-Mesenchymal-Matrix_fibroblast-MatrixFB-A|E18.5-samps / Age Group, Lineage, Cell class and subclass

PLA2G2D COL6A3 FN1

3.73e-05164183519ab4fe885dfe4c50846f346a062acc2cb44299
ToppCellTCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma-Serous_Cystadenocarcinoma-5|TCGA-Ovary / Sample_Type by Project: Shred V9

WDR6 DSTYK POLR3B

3.86e-0516618332d2eaf8a5d03881bf74d680825af2d5110b082d
ToppCelldroplet-Thymus-nan-24m-Myeloid-Macrophage|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PLA2G2D ADAM15 FN1

4.45e-0517418344c21521991ad4789783d73d5aa4993a22876886
ToppCellkidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-Adaptive_/_Maladaptive_/_Repairing_Fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 NOTCH2

4.45e-051741839c916af5eebd932f67dc9117e1d26ff194a2ff2c
ToppCellkidney_cells-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 NOTCH2

4.45e-05174183bc71521f44a5fe013af42b06b5d1bd2446ecf3b5
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Degenerative_Fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

4.60e-05176183fcf324e6402819683f95e0dd94bf1f777c7f4c76
ToppCell356C-Fibroblasts-Fibroblast-G-|356C / Donor, Lineage, Cell class and subclass (all cells)

COL6A3 FRAS1 FN1

4.68e-051771837617270f49cd6b7ba66db72d20560cee985012b2
ToppCell356C-Fibroblasts-Fibroblast-G|356C / Donor, Lineage, Cell class and subclass (all cells)

COL6A3 FRAS1 FN1

4.68e-051771838220cc2fc0ee8764a67a3be51d75248be2453040
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Degenerative_Fibroblast-Degenerative_Fibroblast_119|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

4.84e-0517918368ccfe66474d049a926afc21bffa231446becc69
ToppCell390C-Fibroblasts-Fibroblast-G|390C / Donor, Lineage, Cell class and subclass (all cells)

COL6A3 FRAS1 FN1

4.92e-05180183137fc14859c89e1ecd98bee388bb58c04b835847
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

4.92e-05180183935c091bbcd6d10b81dc4731779e5bd98205c99f
ToppCell5'-Airway_Nasal-Mesenchymal|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

4.92e-051801833dd384b7f3d9582b8fec9fe05100e466e6218b76
ToppCell390C-Fibroblasts-Fibroblast-G-|390C / Donor, Lineage, Cell class and subclass (all cells)

COL6A3 FRAS1 FN1

4.92e-05180183cd6790de050151fedfa2c5ea6ad58b72665414b2
ToppCell5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

5.00e-05181183b116c68393d8836bac080f81a8fcbeb52e0403e7
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

COL6A3 FRAS1 FN1

5.00e-051811839ede19228ba5c0668a9c06c915510b95585216ef
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

5.16e-051831836d98973098c6d20c5305bce6a83a549a7d8dbfba
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

5.16e-05183183803376f5260de83c48d4f7301278d078a32b3e6e
ToppCell5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

5.16e-05183183cc7f5a17b40e8d901885174922e5fa8877643071
ToppCellE17.5-Mesenchymal-mesenchymal_fibroblast-mesenchymal_alveolar_niche_cell|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

ANGPTL7 COL6A3 FN1

5.33e-05185183c85bba1210f1d389add3e40be9b96abac40cf8c1
ToppCell5'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

5.33e-0518518387c416d14ca6255bee39b16e7571553e36ee3069
ToppCell5'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_2-Alveolar_fibroblasts-Alveolar_fibroblasts_L.2.1.1.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

5.42e-051861835473283fb95cee556b1f6934cf72169b676b5bcc
ToppCellControl-Fibroblasts-Alveolar_FB|Control / group, cell type (main and fine annotations)

COL6A3 FRAS1 FN1

5.51e-0518718392d468dde81125d51daf7abd4703741abe1ab91c
ToppCell10x3'2.3-week_12-13-Mesenchymal_osteo-stroma-osteochondral_precursor|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 FRAS1 FN1

5.59e-05188183ed92cddf47defea2f904d36c7ae05ffa323349a9
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL6A3 FRAS1 FN1

5.68e-05189183203c80030df08ae112f9ae4043709f455d87ce89
ToppCellE18.5-samps-Mesenchymal|E18.5-samps / Age Group, Lineage, Cell class and subclass

COL6A3 NOTCH2 FN1

5.68e-051891830c18d3de4720759cf802eefb4d0ddde2a9246a1a
ToppCell(5)_Fibroblasts-(5)_Fibroblast-C_(Myofibroblast)|(5)_Fibroblasts / Lung cell shreds - cell class (v4) and cell subclass (v4)

COL6A3 FRAS1 FN1

5.77e-0519018371e112dfb8c3190fe0286b45a046ea789eb6a8db
ToppCelldroplet-Limb_Muscle-Pre-Sort-18m-Mesenchymal-mesenchymal_stem_cell|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ANGPTL7 COL6A3 FN1

5.86e-051911831b26056df078674f37a6c06f6256b30cfcec21a7
ToppCellE16.5-samps-Mesenchymal-Matrix_fibroblast-_fetal|E16.5-samps / Age Group, Lineage, Cell class and subclass

COL6A3 NOTCH2 FN1

5.86e-051911833379d145d34f89150f7b06d1340022cfc6b4a6ce
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL6A3 PAPLN FN1

5.86e-0519118308720998aa55131d7377c4c67c4c935865bd7d79
ToppCellfacs-Aorta-Heart-3m-Mesenchymal-fibroblast|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SLC6A4 FRAS1 FN1

5.86e-051911839214655dca96d766737c9f30b624d7fe7050342e
ToppCellkidney_cells-Adult_normal_reference-Mesenchymal-Fibroblast-Degenerative_Fibroblast-Degenerative_Fibroblast_119|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

5.96e-05192183f88aba74d6e8c594c32fe2bc095b5da28b4b28e9
ToppCellkidney_cells-Adult_normal_reference-Mesenchymal-Fibroblast-Degenerative_Fibroblast|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

5.96e-0519218341a8326cd5bc19ad5041068501bab4c72399222e
ToppCellCOPD-Stromal-Myofibroblast|Stromal / Disease state, Lineage and Cell class

COL6A3 FRAS1 FN1

5.96e-0519218362904f94dfce430456f05066522cbf9bd29f4d7e
ToppCellMesenchymal-matrix_fibroblast_1_cell|World / Lineage, Cell type, age group and donor

COL6A3 FRAS1 FN1

6.05e-05193183acad568621ed677031797b8c2e34dafea798d681
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

COL6A3 PAPLN FN1

6.05e-05193183b05361ffe111a38cfa26eb86e4ae62c15ac99b7b
ToppCellTracheal-NucSeq-Stromal-Peri/Epineurial_-NAF_endoneurial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ANGPTL7 COL6A3 FN1

6.05e-05193183549a0b750c860b615aff767ad04c9a9d20f802f0
ToppCellfacs-Tongue-nan-3m-Epithelial-keratinocyte|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PSAPL1 ADAM15 NOTCH2

6.05e-0519318333437fdb417d78463caee14a9f0e094da1733829
ToppCellCOVID-19-Heart-Fib_2|Heart / Disease (COVID-19 only), tissue and cell type

COL6A3 NOTCH2 FN1

6.14e-05194183d91c9f2ec47319051fc398320693fddbe8bbd4d6
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

6.14e-0519418302b8102be9414d6964cd71019613edff6d88b893
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Degenerative_Fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

6.14e-0519418329f83cdd63314fff41258937d70b881a5503bfcc
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL6A3 FRAS1 FN1

6.14e-0519418335f132cc38ac133be01834ed0946188aa0757eb4
ToppCellPND01-03-samps-Mesenchymal|PND01-03-samps / Age Group, Lineage, Cell class and subclass

COL6A3 NOTCH2 FN1

6.14e-051941834f9bd0ded0dde1df885850714f29e73e992539a5
ToppCellkidney_cells-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Degenerative_Fibroblast-Degenerative_Fibroblast_119|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

6.14e-05194183d3db241ea316bbcde6d16618193b474591ad5ce4
ToppCellCOVID-19-Heart-Fib_1|Heart / Disease (COVID-19 only), tissue and cell type

COL6A3 NOTCH2 FN1

6.24e-05195183f423baa36ac7cdc383c033e35a7d17e6bf913323
ToppCellCOVID-19-Fibroblasts-Alveolar_FB|COVID-19 / group, cell type (main and fine annotations)

COL6A3 FRAS1 FN1

6.24e-05195183603050beeb33c331d4b2e3fa46cae3f3e0e4bdc7
ToppCellkidney_cells-Adult_normal_reference-Mesenchymal-Fibroblast|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

ANGPTL7 COL6A3 FN1

6.24e-0519518347762d9e442fb1f6f0033e3e10f4c6e498d2c081
ToppCellPCW_05-06-Mesenchymal|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

COL6A3 NOTCH2 FN1

6.33e-05196183dca52c57ba35d9395cdbca8b881f12ece721b10f
ToppCell368C-Fibroblasts-Fibroblast-G-|368C / Donor, Lineage, Cell class and subclass (all cells)

COL6A3 FRAS1 FN1

6.43e-05197183d5d9263451f6c10cb3b9c17740183ca334e24851
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

COL6A3 FRAS1 FN1

6.43e-051971830034bae02ee7fcfea520d453ca3c842ab6963b12
ToppCell368C-Fibroblasts-Fibroblast-G|368C / Donor, Lineage, Cell class and subclass (all cells)

COL6A3 FRAS1 FN1

6.43e-05197183156155c2f0c1a2461e45803da578af18ee221660
ToppCellfacs-Trachea-3m|Trachea / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

COL6A3 RABGEF1 NOTCH2

6.43e-05197183e77016d64b1cac9825fec7cfe5071f1567401187
ToppCellfacs-Trachea-nan-3m|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL6A3 RABGEF1 NOTCH2

6.43e-051971830353d925ee4b7aefc2c51b5fab873f465cdf9ebc
ToppCelldroplet-Limb_Muscle-MUSCLE-1m-Mesenchymal-chondrocyte-like|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ANGPTL7 COL6A3 FN1

6.52e-05198183524305c5d7b1d53e86ec0af775efefa3e0955e47
ToppCellCOVID-19-lung-Fibroblast|lung / Disease (COVID-19 only), tissue and cell type

COL6A3 FRAS1 FN1

6.52e-05198183df3de77216f5c5d6141ec44d01c56b942f611838
ToppCellFetal_29-31_weeks|World / Lineage, Cell type, age group and donor

COL6A3 FRAS1 FN1

6.62e-051991835b9d355795dd03a22f0961dfd143425c367a4654
ToppCellTracheal-10x5prime-Stromal-Peri/Epineurial_-NAF_epineurial|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

ANGPTL7 PAPLN FN1

6.62e-05199183fbec5c034576cb1adaf05f6f97cc5525d19e0c1b
ToppCell(2)_Fibroblasts-(24)_Fibro-5|World / Cell class and subclass of bone marrow stroma cells in homeostatis

ANGPTL7 COL6A3 FN1

6.62e-051991836c0354f57883330c685a8d9d5d3014ace7eca584
ToppCell(5)_Fibroblast-G|World / Lung cell shreds - cell class (v4) and cell subclass (v4)

COL6A3 FRAS1 FN1

6.62e-05199183b4a737575be9f8c65771832dd8cd25328d5dae0d
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Neuroepithelial|10w / Sample Type, Dataset, Time_group, and Cell type.

COL6A3 FRAS1 FN1

6.72e-05200183ff0b2675c68e9fc1fa16b3276431f199f3642eac
ToppCellLung_Parenchyma-Severe-Mesenchymal-Mesenchymal-Fibroblasts-3|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)

COL6A3 PAPLN FN1

6.72e-05200183e663995fc44c340d878d66b278b7b5c2ff784301
ToppCellmedial-mesenchymal-Alveolar_Fibroblast-2|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

COL6A3 FRAS1 FN1

6.72e-052001835c0716bf375c8158f7dc2c82bf5eaf37af594dd0
ToppCellmedial-mesenchymal-Alveolar_Fibroblast|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

COL6A3 FRAS1 FN1

6.72e-05200183c22cbfecee00183dd4be678f116ab9fd9ad0a4dd
ToppCellLung_Parenchyma-Severe-Mesenchymal-Mesenchymal-Fibroblasts-3-|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

COL6A3 PAPLN FN1

6.72e-052001832cb8a39a12522a9643c6244d5e94cb4559868bb9
ToppCellBrain_organoid-organoid_Tanaka_cellReport-10w-Neuroepithelial-Proteoglycan-expressing_cell|10w / Sample Type, Dataset, Time_group, and Cell type.

COL6A3 FRAS1 FN1

6.72e-0520018307d2133c85e0a4eb8bef653ee15ecd0f1b2bbd44
ToppCellmedial-2-mesenchymal-Alveolar_Fibroblast|2 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

COL6A3 FRAS1 FN1

6.72e-05200183cc6062dac07916c29091fc6bee2b864d29e6525b
ToppCellParenchymal-NucSeq-Stromal-Fibroblastic-Fibro_alveolar|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

COL6A3 FRAS1 FN1

6.72e-0520018334f52003988ce6329d8deeee1ab875fa77e01e9d
ToppCellParenchyma_COVID-19-Stromal-TX-Fibroblasts-3|Parenchyma_COVID-19 / Sample group, Lineage and Cell type

COL6A3 PAPLN FN1

6.72e-052001838cc5057b0e5ae9b72ea40d2ffbc52b79bf87ccef
ToppCellBronchial-NucSeq-Stromal-Fibroblastic-Fibro_alveolar|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

COL6A3 FRAS1 FN1

6.72e-05200183e8462395fee0a532d1e7ec7f1795f28c42af6541
ToppCell10x5'v1-week_14-16-Mesenchymal_osteo-stroma-osteochondral_precursor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

COL6A3 FRAS1 FN1

6.72e-05200183ad3fb8ef0be45032369d1325024787fbe1dfb8d6
ToppCellmetastatic_Lymph_Node-Fibroblasts-Myofibroblasts|Fibroblasts / Location, Cell class and cell subclass

COL6A3 FN1

3.91e-0473182116259a036373bccaeb77fe3c675741a5ca81c52
ToppCellEntopeduncular-Macroglia-OLIGODENDROCYTE-O1-Trf|Entopeduncular / BrainAtlas - Mouse McCarroll V32

PSAPL1 COL6A3

4.23e-0476182efbbbf91bca35720d8ecddb076f2c9f4de25e44d
ToppCellEntopeduncular-Macroglia-OLIGODENDROCYTE-O1|Entopeduncular / BrainAtlas - Mouse McCarroll V32

PSAPL1 COL6A3

4.23e-0476182254d18bece2676faa4bbeb8d48b1d327ab3c2215
ToppCellPosterior_cortex-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)--|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

7.60e-0410218230fa92383898f370dabc41dd23d6907f14ba1a06
ToppCellPosterior_cortex-Hematopoietic-MACROPHAGE-MP1(C1qb)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

7.60e-041021829392288e284b71f3a208d9f283e6e3c944b7dd10
ToppCellPosterior_cortex-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)-|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

7.60e-04102182c58e09aaa11b664c7d99e91f903561fa18460f05
ToppCellPosterior_cortex-Hematopoietic-MACROPHAGE|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

7.60e-0410218257ad3d48adeb41f6ab65883e61d3b1e74a94ad1a
ToppCellPosterior_cortex-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

7.60e-041021820ec549ee94da5f2d7275490e90d816c645f6d4fc
ToppCellHippocampus-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)|Hippocampus / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.32e-04113182d5f183263cec9922d23cfd38ce9157eef4e58edb
ToppCellHippocampus-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)--|Hippocampus / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.32e-041131821df80af2c690dac6bfd3dfd7d0052b66c1ae6ea5
ToppCellHippocampus-Hematopoietic-MACROPHAGE-MP1(C1qb)|Hippocampus / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.32e-041131824b5f545dc02364c5d96a02b0acd68faf1ec4192b
ToppCellHippocampus-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)-|Hippocampus / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.32e-04113182177414e4c859b047a4644664c596a3c22199cdf2
ToppCellHippocampus-Hematopoietic-MACROPHAGE|Hippocampus / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.32e-04113182927d1071f0719b778f0c3d358c5f96a6ffac6645
ToppCellSubstantia_nigra-Hematopoietic-MACROPHAGE-MP1(C1qb)|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.81e-04116182e93dd059d272e597a30e93f4c0504636f4e6c899
ToppCellSubstantia_nigra-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.81e-0411618227201cb805fe73b5ec51d7d585d047a4c043e8b0
ToppCellSubstantia_nigra-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)-|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.81e-041161824e84b6f6661bb5ba0fe0de38a23bee9cc3727d94
ToppCellSubstantia_nigra-Hematopoietic-MACROPHAGE-MP1(C1qb)-MACROPHAGE_Macrophage.C1qb.Mrc1_(Resident_macrophage)--|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.81e-0411618215d9a3d8c3cc1f6a1aead03cf84dc876c76b7063
ToppCellSubstantia_nigra-Hematopoietic-MACROPHAGE|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

9.81e-04116182d3194bda2e3d5fd021e4015eed98c5888befe03d
ToppCelldroplet-Lung-1m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l14|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

POLR3B FN1

1.19e-03128182376102331d79010c1b2ce26e6ab0134c7b8a4ec3
ToppCelldroplet-Lung-21m-Hematologic-myeloid-classical_monocyte-classical_monocyte_l14|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

DSTYK FN1

1.31e-03134182932b7dd5781b730dcd2ffe43f6e142e3f8630f67
ToppCellfacs-Pancreas-Exocrine-18m-Epithelial-nan|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ANGPTL7 DSTYK

1.36e-03137182e9b88ad86b75454a8292a94879c5b665adc42744
ToppCellfacs-Aorta-Heart-3m-Mesenchymal-nan|Aorta / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PLA2G2D LHFPL1

1.36e-03137182587a369b148bb2600c06db39298feddfc99cb6ad
ToppCellCerebellum-Hematopoietic-MICROGLIA|Cerebellum / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

1.40e-0313918275cca1e6c1af289987d5d98455e9c6db81ecdd64
ToppCellCerebellum-Hematopoietic-MICROGLIA-MI1(C1qb)-MICROGLIA_Microglia.C1qb.Mrc1-Tmem119_(Resident_macrophage)|Cerebellum / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

1.40e-031391820ae117308bd10d3a7d2688794c69dc5a31cfca5f
ToppCellCerebellum-Hematopoietic-MICROGLIA-MI1(C1qb)-MICROGLIA_Microglia.C1qb.Mrc1-Tmem119_(Resident_macrophage)--|Cerebellum / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

1.40e-03139182fac6a3100a277efa1db250e0c576be1a0c901e6d
ToppCellCerebellum-Hematopoietic|Cerebellum / BrainAtlas - Mouse McCarroll V32

PLA2G2D ANGPTL7

1.40e-031391823913c3828ad4cb5c71380519d0cf5f195e53c51d
DiseaseUnilateral agenesis of kidney

FRAS1 DSTYK

9.82e-068182C0266294
Diseasehepatocyte growth factor measurement

SLC6A4 NOTCH2

3.27e-0444182EFO_0006903
Diseasechronic obstructive pulmonary disease

TASP1 COL6A3 FRAS1 DSTYK

6.91e-04688184EFO_0000341
DiseaseAlcohol abuse

SLC6A4 FN1

7.59e-0467182C0085762
Diseasenon-high density lipoprotein cholesterol measurement

ADAM15 DSTYK ZDHHC24 FN1

7.90e-04713184EFO_0005689
Diseasechin morphology measurement

TASP1 ADAM15

8.28e-0470182EFO_0007842
DiseaseGlioblastoma

NOTCH2 FN1

1.05e-0379182C0017636
Diseasemyocardial infarction

SLC6A4 COL6A3 FN1

1.18e-03350183EFO_0000612
DiseaseGiant Cell Glioblastoma

NOTCH2 FN1

1.19e-0384182C0334588
Diseasesystemic lupus erythematosus

COL6A3 ADAM15 GALC NOTCH2

1.21e-03799184MONDO_0007915

Protein segments in the cluster

PeptideGeneStartEntry
NCCYQGRVRGYAGSW

ADAM15

116

Q13444
KGCGYYGNPAWQGFC

RABGEF1

21

Q9UJ41
GGYWYNCCTDSNLNG

ANGPTL7

291

O43827
ANRNGGYGCVCVNGW

NOTCH2

316

Q04721
QNGWCVHSCGLGFYQ

FRAS1

446

Q86XX4
GTCRLGWAYYCAGGG

LHFPL1

161

Q86WI0
GQYGVVYLCDNWGGH

DSTYK

661

Q6XUX3
QCYCYGRGIGEWHCQ

FN1

586

P02751
SCARFWYGGCGGNEN

COL6A3

3136

P12111
GCWGRILNQNYINGY

GALC

286

P54803
CNGQLQGIVSWGYGC

PRSS3P2

206

Q8NHM4
ARCGAVGYCQGAVWN

PSAPL1

41

Q6NUJ1
YWPYGCHCGLGGRGQ

PLA2G2D

41

Q9UNK4
VGQCNRFWYGGCHGN

PAPLN

776

O95428
GQCGLLGYSGWCHYC

POLR3B

1081

Q9NW08
RCALGGQGLEVYNWY

WDR6

1106

Q9NNW5
GRGLGQGWAYCYQCQ

ZDHHC24

86

Q6UX98
NVWRFPYICYQNGGG

SLC6A4

101

P31645
GRVGQAALYGCGCWA

TASP1

261

Q9H6P5