Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	CDP phosphatase activity	ENTPD1 ENTPD4	6.23e-05	4	65	2	GO:0036384
GeneOntologyMolecularFunction	phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity	TPTE INPP5D	1.04e-04	5	65	2	GO:0016314
GeneOntologyMolecularFunction	CTPase activity	ENTPD1 ENTPD4	1.55e-04	6	65	2	GO:0043273
GeneOntologyMolecularFunction	UDP phosphatase activity	ENTPD1 ENTPD4	3.70e-04	9	65	2	GO:0045134
GeneOntologyMolecularFunction	phosphatidylinositol trisphosphate phosphatase activity	TPTE INPP5D	5.63e-04	11	65	2	GO:0034594
GeneOntologyMolecularFunction	GDP phosphatase activity	ENTPD1 ENTPD4	6.74e-04	12	65	2	GO:0004382
GeneOntologyMolecularFunction	cytoskeletal protein binding	NUSAP1 FLNB SGIP1 MYO1A GAS2 DNM1L CTNNA1 ADNP PACSIN2 FRMD3 TTLL7	7.73e-04	1099	65	11	GO:0008092
GeneOntologyBiologicalProcess	mitotic chromosome condensation	NUSAP1 SMC4 BAZ1B	2.54e-05	19	63	3	GO:0007076
GeneOntologyCellularComponent	membrane raft	MYO1A INPP5D ENTPD1 GAB4 CTNNA1 HPSE PACSIN2	1.29e-04	362	65	7	GO:0045121
GeneOntologyCellularComponent	membrane microdomain	MYO1A INPP5D ENTPD1 GAB4 CTNNA1 HPSE PACSIN2	1.34e-04	364	65	7	GO:0098857
GeneOntologyCellularComponent	npBAF complex	SMARCC1 SMARCC2	8.46e-04	14	65	2	GO:0071564
GeneOntologyCellularComponent	brahma complex	SMARCC1 SMARCC2	8.46e-04	14	65	2	GO:0035060
GeneOntologyCellularComponent	supramolecular fiber	NUSAP1 DNAJA3 FLNB FBN1 MYO1A INPP5D GAS2 DNM1L CKAP2 DNAH14 TTLL7	9.46e-04	1179	65	11	GO:0099512
GeneOntologyCellularComponent	RSC-type complex	SMARCC1 SMARCC2	9.74e-04	15	65	2	GO:0016586
GeneOntologyCellularComponent	supramolecular polymer	NUSAP1 DNAJA3 FLNB FBN1 MYO1A INPP5D GAS2 DNM1L CKAP2 DNAH14 TTLL7	1.00e-03	1187	65	11	GO:0099081
GeneOntologyCellularComponent	nBAF complex	SMARCC1 SMARCC2	1.11e-03	16	65	2	GO:0071565
GeneOntologyCellularComponent	actin filament	DNAJA3 MYO1A INPP5D GAS2	1.11e-03	146	65	4	GO:0005884
GeneOntologyCellularComponent	plasma membrane raft	MYO1A ENTPD1 CTNNA1 PACSIN2	1.14e-03	147	65	4	GO:0044853
GeneOntologyCellularComponent	chromosome, centromeric region	ESCO2 SMC4 SMARCC1 BAZ1B SMARCC2	1.68e-03	276	65	5	GO:0000775
GeneOntologyCellularComponent	polymeric cytoskeletal fiber	NUSAP1 DNAJA3 MYO1A INPP5D GAS2 DNM1L CKAP2 DNAH14 TTLL7	1.78e-03	899	65	9	GO:0099513
GeneOntologyCellularComponent	clathrin-coated pit	FNBP1 SGIP1 DNM1L	1.99e-03	80	65	3	GO:0005905
GeneOntologyCellularComponent	XY body	ESCO2 SMARCC1	2.31e-03	23	65	2	GO:0001741
Domain	SMARCC_C	SMARCC1 SMARCC2	1.16e-05	2	64	2	IPR032451
Domain	SMARCC_N	SMARCC1 SMARCC2	1.16e-05	2	64	2	IPR032450
Domain	SWIRM-assoc	SMARCC1 SMARCC2	1.16e-05	2	64	2	IPR032448
Domain	SWIRM-assoc_2	SMARCC1 SMARCC2	1.16e-05	2	64	2	PF16496
Domain	SWIRM-assoc_1	SMARCC1 SMARCC2	1.16e-05	2	64	2	PF16495
Domain	SWIRM-assoc_3	SMARCC1 SMARCC2	1.16e-05	2	64	2	PF16498
Domain	SWIRM	SMARCC1 SMARCC2	1.72e-04	6	64	2	PS50934
Domain	SWIRM	SMARCC1 SMARCC2	1.72e-04	6	64	2	PF04433
Domain	SWIRM	SMARCC1 SMARCC2	1.72e-04	6	64	2	IPR007526
Domain	Chromo/shadow_dom	MSL3 SMARCC1 SMARCC2	1.95e-04	33	64	3	IPR000953
Domain	CHROMO	MSL3 SMARCC1 SMARCC2	1.95e-04	33	64	3	SM00298
Domain	GDA1_CD39_NTPase	ENTPD1 ENTPD4	3.19e-04	8	64	2	IPR000407
Domain	GDA1_CD39	ENTPD1 ENTPD4	3.19e-04	8	64	2	PF01150
Domain	GDA1_CD39_NTPASE	ENTPD1 ENTPD4	3.19e-04	8	64	2	PS01238
Domain	FCH	FNBP1 PACSIN2	2.55e-03	22	64	2	PF00611
Domain	FCH	FNBP1 PACSIN2	2.55e-03	22	64	2	SM00055
Domain	FCH_dom	FNBP1 PACSIN2	2.79e-03	23	64	2	IPR001060
Domain	F_BAR	FNBP1 PACSIN2	3.30e-03	25	64	2	IPR031160
Domain	F_BAR	FNBP1 PACSIN2	3.30e-03	25	64	2	PS51741
Domain	SANT_dom	SMARCC1 SMARCC2	3.56e-03	26	64	2	IPR017884
Domain	SANT	SMARCC1 SMARCC2	4.13e-03	28	64	2	PS51293
Domain	BRCT_dom	SMARCC1 SMARCC2	4.13e-03	28	64	2	IPR001357
Domain	Myb_DNA-binding	SMARCC1 SMARCC2	6.39e-03	35	64	2	PF00249
Domain	MYB_LIKE	SMARCC1 SMARCC2	7.51e-03	38	64	2	PS50090
Pathway	BIOCARTA_VDR_PATHWAY	SMARCC1 BAZ1B SMARCC2	6.69e-05	24	47	3	M13404
Pubmed	Fanconi anemia protein, FANCA, associates with BRG1, a component of the human SWI/SNF complex.	HSP90B1 SMARCC1 SMARCC2	1.76e-06	13	65	3	11726552
Pubmed	The Swi3 protein plays a unique role in regulating respiration in eukaryotes.	SMARCC1 SMARCC2	3.44e-06	2	65	2	27190130
Pubmed	Mitochondrial chaperone DnaJA3 induces Drp1-dependent mitochondrial fragmentation.	DNAJA3 DNM1L	3.44e-06	2	65	2	22595283
Pubmed	Loss of BAF Complex in Developing Cortex Perturbs Radial Neuronal Migration in a WNT Signaling-Dependent Manner.	SMARCC1 SMARCC2 CTNNA1	6.94e-06	20	65	3	34220450
Pubmed	Rapid brain-derived neurotrophic factor-dependent sequestration of amygdala and hippocampal GABA(A) receptors via different tyrosine receptor kinase B-mediated phosphorylation pathways.	BDNF GABRA1	1.03e-05	3	65	2	21195749
Pubmed	BAF chromatin remodeling complex: cortical size regulation and beyond.	SMARCC1 SMARCC2	1.03e-05	3	65	2	23974113
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	SGIP1 DOCK11 RABEP1 N4BP2 SMARCC1 SMARCC2 DNM1L CTNNA1 ADNP GOLGA4	1.14e-05	963	65	10	28671696
Pubmed	Transcription factor protein interactomes reveal genetic determinants in heart disease.	ESCO2 NUSAP1 DNAJA3 SMARCC1 BAZ1B SMARCC2 ADNP	1.18e-05	411	65	7	35182466
Pubmed	The functional interactome landscape of the human histone deacetylase family.	DNAJA3 SMC4 SMARCC1 BAZ1B ADNP USP47	1.71e-05	289	65	6	23752268
Pubmed	Gene trap expression and mutational analysis for genes involved in the development of the mammalian nervous system.	RTTN CTNNA1	2.06e-05	4	65	2	9626495
Pubmed	Activity-dependent neuroprotective protein constitutes a novel element in the SWI/SNF chromatin remodeling complex.	SMARCC2 ADNP	2.06e-05	4	65	2	17878164
Pubmed	The tumor suppressor hSNF5/INI1 modulates cell growth and actin cytoskeleton organization.	SMARCC1 SMARCC2	2.06e-05	4	65	2	15150092
Pubmed	CD150 association with either the SH2-containing inositol phosphatase or the SH2-containing protein tyrosine phosphatase is regulated by the adaptor protein SH2D1A.	CD84 INPP5D	2.06e-05	4	65	2	11313386
Pubmed	RNF138 inhibits late inflammatory gene transcription through degradation of SMARCC1 of the SWI/SNF complex.	SMARCC1 SMARCC2 ADNP	2.20e-05	29	65	3	36800290
Pubmed	Identification of interaction partners for individual SH3 domains of Fas ligand associated members of the PCH protein family in T lymphocytes.	FNBP1 INPP5D PACSIN2	2.70e-05	31	65	3	19041431
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	FLNB HSP90B1 SMC4 BAZ1B SMARCC2 CKAP2 ADNP IGLL5	2.88e-05	652	65	8	31180492
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	FLNB SMC4 SMARCC1 BAZ1B SMARCC2 CTNNA1 ADNP USP47	2.91e-05	653	65	8	22586326
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	ESCO2 NUSAP1 FNBP1 FLNB SMARCC1 BAZ1B DNM1L CKAP2 PACSIN2 SBNO2	3.14e-05	1084	65	10	11544199
Pubmed	Five SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin (SMARC) genes are dispersed in the human genome.	SMARCC1 SMARCC2	3.43e-05	5	65	2	9693044
Pubmed	Regulating SWI/SNF subunit levels via protein-protein interactions and proteasomal degradation: BAF155 and BAF170 limit expression of BAF57.	SMARCC1 SMARCC2	3.43e-05	5	65	2	16199878
Pubmed	Chromatin-remodelling factor BRG1 selectively activates a subset of interferon-alpha-inducible genes.	SMARCC1 SMARCC2	3.43e-05	5	65	2	12244326
Pubmed	Members of the hSWI/SNF chromatin remodeling complex associate with and are phosphorylated by protein kinase B/Akt.	SMARCC1 SMARCC2	3.43e-05	5	65	2	16568092
Pubmed	The HSA domain of BRG1 mediates critical interactions required for glucocorticoid receptor-dependent transcriptional activation in vivo.	SMARCC1 SMARCC2	3.43e-05	5	65	2	18086889
Pubmed	p300/CREB binding protein-related protein p270 is a component of mammalian SWI/SNF complexes.	SMARCC1 SMARCC2	3.43e-05	5	65	2	9584200
Pubmed	Identification of interaction partners of the cytosolic polyproline region of CD95 ligand (CD178).	FNBP1 PACSIN2	3.43e-05	5	65	2	12023017
Pubmed	Identification of developmentally expressed proteins that functionally interact with Nedd4 ubiquitin ligase.	N4BP2 N4BP1	3.43e-05	5	65	2	11717310
Pubmed	ATG5 is required for B cell polarization and presentation of particulate antigens.	DNAJA3 HSP90B1 LEMD3 INPP5D SMC4 CSTF1 SMARCC1 SMARCC2	4.80e-05	701	65	8	30196744
Pubmed	Chromatin Remodeling BAF155 Subunit Regulates the Genesis of Basal Progenitors in Developing Cortex.	SMARCC1 SMARCC2 CTNNA1	5.02e-05	38	65	3	30240734
Pubmed	Interaction network of human early embryonic transcription factors.	HSP90B1 HIVEP2 SMARCC1 BAZ1B SMARCC2 CTNNA1	5.07e-05	351	65	6	38297188
Pubmed	Variations in the composition of mammalian SWI/SNF chromatin remodelling complexes.	SMARCC1 SMARCC2	5.13e-05	6	65	2	19650111
Pubmed	Testing for association between MeCP2 and the brahma-associated SWI/SNF chromatin-remodeling complex.	SMARCC1 SMARCC2	5.13e-05	6	65	2	16940996
Pubmed	Jmjd3 and UTX play a demethylase-independent role in chromatin remodeling to regulate T-box family member-dependent gene expression.	SMARCC1 SMARCC2	5.13e-05	6	65	2	21095589
Pubmed	The p270 (ARID1A/SMARCF1) subunit of mammalian SWI/SNF-related complexes is essential for normal cell cycle arrest.	SMARCC1 SMARCC2	5.13e-05	6	65	2	16230384
Pubmed	BRCA1 is associated with a human SWI/SNF-related complex: linking chromatin remodeling to breast cancer.	SMARCC1 SMARCC2	5.13e-05	6	65	2	10943845
Pubmed	Varying modulation of HIV-1 LTR activity by Baf complexes.	SMARCC1 SMARCC2	5.13e-05	6	65	2	21699904
Pubmed	N-Terminomics for the Identification of In Vitro Substrates and Cleavage Site Specificity of the SARS-CoV-2 Main Protease.	FLNB HSP90B1 RABEP1 CTNNA1 ADNP GOLGA4	5.83e-05	360	65	6	33111431
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	DNAJA3 FLNB HSP90B1 SMC4 CSTF1 SMARCC1 BAZ1B DNM1L TDRD6 ADNP GOLGA4	6.15e-05	1425	65	11	30948266
Pubmed	Requirement for SWI/SNF chromatin-remodeling complex in Tat-mediated activation of the HIV-1 promoter.	SMARCC1 SMARCC2	7.18e-05	7	65	2	16601680
Pubmed	BRIT1/MCPH1 links chromatin remodelling to DNA damage response.	SMARCC1 SMARCC2	7.18e-05	7	65	2	19525936
Pubmed	Scaffolding protein Gab2 mediates differentiation signaling downstream of Fms receptor tyrosine kinase.	INPP5D GAB4	7.18e-05	7	65	2	11287610
Pubmed	Chromatin-remodeling factor SMARCD2 regulates transcriptional networks controlling differentiation of neutrophil granulocytes.	SMARCC1 SMARCC2	7.18e-05	7	65	2	28369036
Pubmed	Target genes of the largest human SWI/SNF complex subunit control cell growth.	SMARCC1 SMARCC2	7.18e-05	7	65	2	21118156
Pubmed	Grp94 Protein Delivers γ-Aminobutyric Acid Type A (GABAA) Receptors to Hrd1 Protein-mediated Endoplasmic Reticulum-associated Degradation.	HSP90B1 GABRA1	7.18e-05	7	65	2	26945068
Pubmed	The novel Nrf2-interacting factor KAP1 regulates susceptibility to oxidative stress by promoting the Nrf2-mediated cytoprotective response.	SMC4 SMARCC2	7.18e-05	7	65	2	21382013
Pubmed	Modulation of GABA(A) receptor phosphorylation and membrane trafficking by phospholipase C-related inactive protein/protein phosphatase 1 and 2A signaling complex underlying brain-derived neurotrophic factor-dependent regulation of GABAergic inhibition.	BDNF GABRA1	7.18e-05	7	65	2	16754670
Pubmed	A new role for the architecture of microvillar actin bundles in apical retention of membrane proteins.	FLNB MYO1A DNM1L	8.36e-05	45	65	3	22114352
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	FNBP1 FLNB HIVEP2 PCDHGB1 RABEP1 ENTPD1 CKAP2 DNAH14 GOLGA4 FRMD3 SBNO2	9.10e-05	1489	65	11	28611215
Pubmed	CHD7 cooperates with PBAF to control multipotent neural crest formation.	SMARCC1 SMARCC2	9.56e-05	8	65	2	20130577
Pubmed	Regulation of FasL expression: a SH3 domain containing protein family involved in the lysosomal association of FasL.	FNBP1 PACSIN2	9.56e-05	8	65	2	16318909
Pubmed	AnkG hemizygous mice present cognitive impairment and elevated anxiety/depressive-like traits associated with decreased expression of GABA receptors and postsynaptic density protein.	BDNF GABRA1	9.56e-05	8	65	2	28821923
Pubmed	The assembly of mammalian SWI/SNF chromatin remodeling complexes is regulated by lysine-methylation dependent proteolysis.	SMARCC1 SMARCC2	9.56e-05	8	65	2	36335117
Pubmed	Epigenetic regulation by BAF (mSWI/SNF) chromatin remodeling complexes is indispensable for embryonic development.	SMARCC1 SMARCC2	9.56e-05	8	65	2	26986003
Pubmed	The epigenetic modifier PBRM1 restricts the basal activity of the innate immune system by repressing retinoic acid-inducible gene-I-like receptor signalling and is a potential prognostic biomarker for colon cancer.	SMARCC1 SMARCC2	9.56e-05	8	65	2	28940253
Pubmed	Critical role of the BAF chromatin remodeling complex during murine neural crest development.	SMARCC1 SMARCC2	9.56e-05	8	65	2	33750945
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	FNBP1 MSL3 SMARCC1 BAZ1B SMARCC2 CTNNA1 GOLGA4 USP47	9.57e-05	774	65	8	15302935
Pubmed	EVI1 oncoprotein interacts with a large and complex network of proteins and integrates signals through protein phosphorylation.	SMC4 SMARCC2 ADNP PACSIN2	9.96e-05	128	65	4	23858473
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	NUSAP1 SMC4 CSTF1 SMARCC1 BAZ1B SMARCC2 DNM1L ADNP IGLL5	1.09e-04	1014	65	9	32416067
Pubmed	ROR2 Downregulation Activates the MSX2/NSUN2/p21 Regulatory Axis and Promotes Dental Pulp Stem Cell Senescence.	HSP90B1 TIGD1 SMARCC1 GOLGA4	1.09e-04	131	65	4	35356984
Pubmed	Microfibril-associated glycoprotein-2 interacts with fibrillin-1 and fibrillin-2 suggesting a role for MAGP-2 in elastic fiber assembly.	FBN1 GYG1	1.23e-04	9	65	2	12122015
Pubmed	Mammalian SWI/SNF--a subunit BAF250/ARID1 is an E3 ubiquitin ligase that targets histone H2B.	SMARCC1 SMARCC2	1.23e-04	9	65	2	20086098
Pubmed	The BAF chromatin complex component SMARCC1 does not mediate GLI transcriptional repression of Hedgehog target genes in limb buds.	SMARCC1 SMARCC2	1.23e-04	9	65	2	37805104
Pubmed	APOE4 impairs the microglial response in Alzheimer's disease by inducing TGFβ-mediated checkpoints.	INPP5D TMEM119	1.23e-04	9	65	2	37749326
Pubmed	EYA1 and SIX1 drive the neuronal developmental program in cooperation with the SWI/SNF chromatin-remodeling complex and SOX2 in the mammalian inner ear.	SMARCC1 SMARCC2	1.23e-04	9	65	2	22513373
Pubmed	Rapid and phosphoinositol-dependent binding of the SWI/SNF-like BAF complex to chromatin after T lymphocyte receptor signaling.	SMARCC1 SMARCC2	1.23e-04	9	65	2	9845365
Pubmed	Genome-wide shRNA screening identifies host factors involved in early endocytic events for HIV-1-induced CD4 down-regulation.	HSP90B1 RABEP1 GOLGA4	1.44e-04	54	65	3	25496667
Pubmed	Hematopoiesis controlled by distinct TIF1gamma and Smad4 branches of the TGFbeta pathway.	SMARCC1 SMARCC2	1.53e-04	10	65	2	16751102
Pubmed	Novel SWI/SNF chromatin-remodeling complexes contain a mixed-lineage leukemia chromosomal translocation partner.	SMARCC1 SMARCC2	1.53e-04	10	65	2	12665591
Pubmed	Purification and characterization of mSin3A-containing Brg1 and hBrm chromatin remodeling complexes.	SMARCC1 SMARCC2	1.53e-04	10	65	2	11238380
Pubmed	A methylation-mediator complex in hormone signaling.	SMARCC1 SMARCC2	1.53e-04	10	65	2	14729568
Pubmed	Chromatin Remodelers Interact with Eya1 and Six2 to Target Enhancers to Control Nephron Progenitor Cell Maintenance.	SMARCC1 SMARCC2	1.53e-04	10	65	2	34716243
Pubmed	mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.	FLNB HSP90B1 SMARCC1 SMARCC2 CTNNA1	1.64e-04	274	65	5	34244482
Pubmed	ZMYM3 regulates BRCA1 localization at damaged chromatin to promote DNA repair.	SMARCC1 SMARCC2 CKAP2 ADNP	1.83e-04	150	65	4	28242625
Pubmed	Functional selectivity of recombinant mammalian SWI/SNF subunits.	SMARCC1 SMARCC2	1.87e-04	11	65	2	11018012
Pubmed	Mouse endothelial OTUD1 promotes angiotensin II-induced vascular remodeling by deubiquitinating SMAD3.	FLNB SMARCC1	1.87e-04	11	65	2	36579465
Pubmed	BAF60a mediates critical interactions between nuclear receptors and the BRG1 chromatin-remodeling complex for transactivation.	SMARCC1 SMARCC2	1.87e-04	11	65	2	12917342
Pubmed	Genome-wide impact of the BRG1 SWI/SNF chromatin remodeler on the transforming growth factor beta transcriptional program.	SMARCC1 SMARCC2	1.87e-04	11	65	2	18003620
Pubmed	Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.	FNBP1 MYO1A SMC4 SMARCC1 SMARCC2 ADNP USP47 TTLL7	1.92e-04	857	65	8	25609649
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	DNAJA3 FLNB HSP90B1 SMC4 CSTF1 SMARCC1 BAZ1B SMARCC2 ADNP GOLGA4	1.96e-04	1353	65	10	29467282
Pubmed	The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.	ESCO2 SMARCC1 BAZ1B SMARCC2	2.18e-04	157	65	4	30186101
Pubmed	Conditional Loss of BAF (mSWI/SNF) Scaffolding Subunits Affects Specification and Proliferation of Oligodendrocyte Precursors in Developing Mouse Forebrain.	SMARCC1 SMARCC2	2.24e-04	12	65	2	34336815
Pubmed	SYT associates with human SNF/SWI complexes and the C-terminal region of its fusion partner SSX1 targets histones.	SMARCC1 SMARCC2	2.24e-04	12	65	2	11734557
Pubmed	Chromatin remodelers and lineage-specific factors interact to target enhancers to establish proneurosensory fate within otic ectoderm.	SMARCC1 SMARCC2	2.24e-04	12	65	2	33723076
Pubmed	A unique missense allele of BAF155, a core BAF chromatin remodeling complex protein, causes neural tube closure defects in mice.	SMARCC1 SMARCC2	2.65e-04	13	65	2	24170322
Pubmed	Separation and Quantification of Some Alkaloids from Fumaria parviflora by Capillary Isotachophoresis1.	SMARCC1 SMARCC2	2.65e-04	13	65	2	17340523
Pubmed	Protein array based interactome analysis of amyloid-β indicates an inhibition of protein translation.	NUSAP1 SGIP1 TIGD1 CTNNA1 TTLL7	2.70e-04	305	65	5	21244100
Pubmed	Systems analysis of RhoGEF and RhoGAP regulatory proteins reveals spatially organized RAC1 signalling from integrin adhesions.	DOCK11 SMC4 CSTF1 SMARCC1 SMARCC2 CTNNA1 GOLGA4 PACSIN2	3.01e-04	916	65	8	32203420
Pubmed	Investigation of genetic susceptibility factors for human longevity - a targeted nonsynonymous SNP study.	DNAJA3 PXDNL SMC4 TKTL2 BDNF	3.04e-04	313	65	5	20800603
Pubmed	Purification and biochemical heterogeneity of the mammalian SWI-SNF complex.	SMARCC1 SMARCC2	3.08e-04	14	65	2	8895581
Pubmed	SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers.	FLNB HSP90B1 FBN1 DNM1L	3.16e-04	173	65	4	23979707
Pubmed	A high-throughput approach for measuring temporal changes in the interactome.	NUSAP1 FLNB HSP90B1 RABEP1 SMC4 DNM1L N4BP1 CTNNA1 PACSIN2 USP47	3.50e-04	1455	65	10	22863883
Pubmed	BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.	FLNB HSP90B1 SMC4 DNM1L CTNNA1 GOLGA4 PACSIN2	3.52e-04	708	65	7	39231216
Pubmed	Identification of Novel Nuclear Factor of Activated T Cell (NFAT)-associated Proteins in T Cells.	CSTF1 SMARCC1 SMARCC2 ADNP	3.52e-04	178	65	4	27637333
Pubmed	Kinetic analysis of npBAF to nBAF switching reveals exchange of SS18 with CREST and integration with neural developmental pathways.	SMARCC1 SMARCC2	3.56e-04	15	65	2	23785148
Pubmed	An essential switch in subunit composition of a chromatin remodeling complex during neural development.	SMARCC1 SMARCC2	3.56e-04	15	65	2	17640523
Pubmed	The murine SNF5/INI1 chromatin remodeling factor is essential for embryonic development and tumor suppression.	SMARCC1 SMARCC2	3.56e-04	15	65	2	11263494
Pubmed	A pilot multivariate parallel ICA study to investigate differential linkage between neural networks and genetic profiles in schizophrenia.	BDNF GABRA1	3.56e-04	15	65	2	19944766
Pubmed	Mammalian SWI/SNF complexes promote MyoD-mediated muscle differentiation.	SMARCC1 SMARCC2	3.56e-04	15	65	2	11175787
Pubmed	PBAF chromatin-remodeling complex requires a novel specificity subunit, BAF200, to regulate expression of selective interferon-responsive genes.	SMARCC1 SMARCC2	3.56e-04	15	65	2	15985610
Pubmed	Regulation of dendritic development by neuron-specific chromatin remodeling complexes.	SMARCC1 SMARCC2	3.56e-04	15	65	2	17920018
Pubmed	Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.	FLNB CSTF1 SMARCC1 SMARCC2 DNM1L ADNP	3.68e-04	506	65	6	30890647
Interaction	SMARCC1 interactions	FNBP1 HSP90B1 RABEP1 SMC4 SMARCC1 BAZ1B SMARCC2 GOLGA4 USP47	3.29e-06	384	64	9	int:SMARCC1
Interaction	DCTN2 interactions	FLNB RABEP1 N4BP2 INPP5D SMC4 SMARCC1 SMARCC2 DNM1L	1.64e-05	356	64	8	int:DCTN2
Interaction	YAP1 interactions	FLNB HSP90B1 MYO1A SYTL4 RABEP1 SMC4 CSTF1 SMARCC1 BAZ1B SMARCC2 CTNNA1 ADNP USP47	3.30e-05	1095	64	13	int:YAP1
Interaction	SLAMF7 interactions	LEMD3 INPP5D CTNNA1	4.51e-05	22	64	3	int:SLAMF7
Interaction	USP15 interactions	NUSAP1 FNBP1 RABEP1 SMC4 CSTF1 SMARCC1 SMARCC2 DNM1L USP47	5.38e-05	546	64	9	int:USP15
Interaction	FNBP1 interactions	FNBP1 SMC4 SMARCC1 SMARCC2 USP47	6.03e-05	131	64	5	int:FNBP1
Interaction	PPP1R12A interactions	NUSAP1 FNBP1 HSP90B1 SMARCC1 SMARCC2 PACSIN2 USP47	7.09e-05	322	64	7	int:PPP1R12A
Interaction	EML4 interactions	FNBP1 SMC4 SMARCC1 GOLGA4 USP47	7.46e-05	137	64	5	int:EML4
Interaction	H2BC8 interactions	ESCO2 NUSAP1 LEMD3 MSL3 SMARCC1 BAZ1B SMARCC2 CKAP2 ADNP	8.12e-05	576	64	9	int:H2BC8
GeneFamily	Rho GTPase activating proteins\|F-BAR domain containing	FNBP1 PACSIN2	1.11e-03	23	39	2	1288
Coexpression	HAMAI_APOPTOSIS_VIA_TRAIL_UP	NUSAP1 FNBP1 HSP90B1 RABEP1 SMC4 BAZ1B DNM1L GOLGA4 USP47 TTLL7	4.67e-06	656	65	10	M18979
ToppCell	wk_20-22-Hematologic-Meg-ery-Megakaryocyte\|wk_20-22 / Celltypes from embryonic and fetal-stage human lung	CD84 LANCL3 SYTL4 HPSE BDNF FRMD3	1.83e-07	170	65	6	eace4dd09cdbde0fa40a6aa0f3dba1114d0ce475
ToppCell	E18.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-PMP-PMP_G2M\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 FBN1 GYG1 SMC4 CKAP2	1.96e-07	172	65	6	c06ca5d075937747952ed915c9db39a9f62072f9
ToppCell	E18.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-PMP\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 FBN1 GYG1 SMC4 CKAP2	2.17e-07	175	65	6	a154b28b0b2180652d51d4c7d804b3b81b35899e
ToppCell	PND01-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_G2M\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 RTTN APOC2 CKAP2	4.71e-06	168	65	5	52fd65024af8683db11d931f7563cbe8eb815d1c
ToppCell	PND07-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NUSAP1 GAS2 SMC4 CKAP2 FAM83A	4.71e-06	168	65	5	a7eb28e15b591997f1aee09501cb20ae18beca08
ToppCell	E18.5-Epithelial-Epithelial_Alveolar-Epithelial_Alveolar-Sox9_Epi-Sox9_Epi_G2M\|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 USP29 SMC4 CKAP2	5.14e-06	171	65	5	621f9da0bfa09c86fc89fd26919403e94cd56d2b
ToppCell	3'-GW_trimst-1-LargeIntestine-Hematopoietic-Myeloid-Megakaryocyte\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CD84 LANCL3 SYTL4 HPSE FRMD3	5.75e-06	175	65	5	901f0181a30e5cc609dcada8d8a59f0468df6fa5
ToppCell	PND07-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 SMC4 CKAP2 TTLL7	5.91e-06	176	65	5	75412d58438d71c49a6096bb2ef12b7f349653d8
ToppCell	E16.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-VSMC-VSMC_G2M\|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NUSAP1 FBN1 SMC4 TDRD6 BDNF	6.24e-06	178	65	5	9fc5688cf705a74398d24e10e0aab4758612e72b
ToppCell	PND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 SFRP4 SMC4 CKAP2	6.59e-06	180	65	5	5e1680088065be14447d5d5465f91f7edd071a1e
ToppCell	RA-13._Vascular_Smooth_Muscle\|RA / Chamber and Cluster_Paper	FNBP1 FLNB ENTPD1 PACSIN2 TTLL7	7.14e-06	183	65	5	818fd886e0188091310825f9145fa53328f2c979
ToppCell	RA-13._Vascular_Smooth_Muscle\|World / Chamber and Cluster_Paper	FNBP1 FLNB ENTPD1 PACSIN2 TTLL7	7.14e-06	183	65	5	cae2ee08f985a6f005b4b8e959e465350315156a
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast-\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 FBN1 SMC4 CKAP2	7.93e-06	187	65	5	e41e39fd3791acf8ae5376cc5061e196d96868ae
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Cycling_Myofibroblast\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 FBN1 SMC4 CKAP2	7.93e-06	187	65	5	cefa211ef224e803ea9467882e2ca74d0b1492f1
ToppCell	Endothelial-Endothelial-E\|Endothelial / shred on cell class and cell subclass (v4)	FLNB FBN1 ENTPD1 FRMD3 GABRA1	8.14e-06	188	65	5	2777eb7689b271c199021fe7d9db88ccebff14de
ToppCell	LA-13._Vascular_Smooth_Muscle\|LA / Chamber and Cluster_Paper	FNBP1 FLNB ENTPD1 PACSIN2 TTLL7	8.14e-06	188	65	5	34e1b074a3995aa46ab194eb45115d76d1a5514d
ToppCell	Fibroblast-E_(Early_Fibroblastic_progenitor)\|World / shred on cell class and cell subclass (v4)	ESCO2 NUSAP1 FBN1 SMC4 CKAP2	8.14e-06	188	65	5	be3db9768364568f44e32ae6b3bf99e49b0978bb
ToppCell	Severe_COVID-19-B_cell\|Severe_COVID-19 / Disease group,lineage and cell class （2021.01.30）	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.35e-06	189	65	5	59ce8f15f413557d2059ee6b53ba5957b864cb8e
ToppCell	BAL-Severe-Lymphocyte-B-Plasmablast-Plasmablast-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.35e-06	189	65	5	b0fcbe13a91a4b8dfa507b7a484f45477ef31609
ToppCell	BAL-Severe-Lymphocyte-B-Plasmablast\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.35e-06	189	65	5	d5d25f4151ea96e2d4b3a0e0910e7ff995eaf752
ToppCell	Severe_COVID-19-B_cell-Plasmablast\|Severe_COVID-19 / Disease group,lineage and cell class （2021.01.30）	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.35e-06	189	65	5	d7bfefc8c35374c5288807349a76dbb10e84c52b
ToppCell	LA-13._Vascular_Smooth_Muscle\|World / Chamber and Cluster_Paper	FNBP1 FLNB ENTPD1 PACSIN2 TTLL7	8.35e-06	189	65	5	6b3e88751b95fc2173f2c3d5061ed632d0c5f01c
ToppCell	BAL-Severe-Lymphocyte-B-Plasmablast-Plasmablast\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.35e-06	189	65	5	0f0607642eecc66222d23afe6d77b6872343cb8e
ToppCell	BAL-Severe-Lymphocyte-B\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.57e-06	190	65	5	e82fefea5ac03470d10463832d3efd2380895860
ToppCell	BAL-Severe-Lymphocyte-B-Plasmablast\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.57e-06	190	65	5	9560722facaf3516936fcbc2a900a405fd85e5d0
ToppCell	BAL-Severe-Lymphocyte-B-Plasmablast-Plasmablast\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	8.57e-06	190	65	5	7fbaf46bf24d46543047582f0d262f3523e28eb4
ToppCell	Severe-Lymphoid-Plasma\|Severe / Condition, Lineage, Cell class and cell subclass	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	9.01e-06	192	65	5	8d26584c7897a2c77df9efe787e7c04d1e883df9
ToppCell	Severe-Lymphoid-Plasma-\|Severe / Condition, Lineage, Cell class and cell subclass	NUSAP1 HSP90B1 ENTPD1 SMC4 IGLL5	9.01e-06	192	65	5	3a900d872da80b47104245440eb09b8c80b0b2b0
ToppCell	human_hepatoblastoma-Tumor_cells-T1\|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)	ESCO2 NUSAP1 RTTN SMC4 CKAP2	9.24e-06	193	65	5	4b9fa2a4424f8abe63fa7bee78db93dda04ab15f
ToppCell	PBMC-Control-cDC_3\|Control / Compartment, Disease Groups and Clusters	FNBP1 TPTE HSP90B1 INPP5D ENTPD1	9.96e-06	196	65	5	09d197b321ff9f13c0672ea059c850845b0dbbd5
ToppCell	Non-neuronal-Postmitotic-Microglia-Microglia-8\|World / Primary Cells by Cluster	CD84 INPP5D ENTPD1 APOC2 HPSE	1.02e-05	197	65	5	93bce9741dec4e60dd470acca87cd4c8074f8876
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Immune\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	CD84 FNBP1 DOCK11 INPP5D ENTPD1	1.02e-05	197	65	5	c9b1f2ee7eb31a66af331c5aae29e1bbb5186f5a
ToppCell	TCGA-Skin-Metastatic-Melanoma\|TCGA-Skin / Sample_Type by Project: Shred V9	CD84 SFRP4 DOCK11 INPP5D SMC4	1.05e-05	198	65	5	af4fb9eb2295c7b90624b38ba25619aa15254efa
ToppCell	E16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-PMP\|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 GYG1 SMC4 CKAP2	1.05e-05	198	65	5	148f5fee19ea8dff7f2de4ca69c3b03e5221985d
ToppCell	Fetal_29-31_weeks-Immune\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	CD84 FNBP1 DOCK11 INPP5D ENTPD1	1.05e-05	198	65	5	5dff131356b8c22743bd27b2b21f86ee6e4a0a0d
ToppCell	TCGA-Skin-Metastatic\|TCGA-Skin / Sample_Type by Project: Shred V9	CD84 SFRP4 DOCK11 INPP5D SMC4	1.05e-05	198	65	5	ad39cce004867f083f8da1954e0cf5a263815184
ToppCell	TCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma\|TCGA-Skin / Sample_Type by Project: Shred V9	CD84 SFRP4 DOCK11 INPP5D SMC4	1.05e-05	198	65	5	62cbf4b29e8af4983fb47a17f96da62682a5137e
ToppCell	10x_3'_v2v3-Neoplastic-Differentiated-like-AC-like-AC-like_Prolif-E\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ESCO2 NUSAP1 SMC4 CKAP2 INSYN2A	1.05e-05	198	65	5	7225a6194c52b01c581e58d3cda107c4af96dc4f
ToppCell	10x_3'_v2v3-Neoplastic-Stem-like-OPC-like-OPC-like_Prolif-F\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ESCO2 NUSAP1 GAS2 SMC4 CKAP2	1.05e-05	198	65	5	cd876fba12ff30b74aa507286cb1f3a867011a92
ToppCell	PBMC-Severe-Lymphocyte-B-Plasmablast-Plasmablast-Developping_Plasmablast\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	ESCO2 NUSAP1 HSP90B1 SMC4 IGLL5	1.05e-05	198	65	5	2d8d4eb21b4fe3cc178b3518b3ea39c2d9650f24
ToppCell	Non-neuronal-Postmitotic-Microglia-Microglia\|World / Primary Cells by Cluster	CD84 INPP5D ENTPD1 APOC2 HPSE	1.05e-05	198	65	5	76bcdd96e311fe80504e32e9b5fef0b6510c54b6
ToppCell	356C-Myeloid-Dendritic-cDC_proliferating_1\|356C / Donor, Lineage, Cell class and subclass (all cells)	ESCO2 NUSAP1 ENTPD1 SMC4 CKAP2	1.05e-05	198	65	5	f801157468e59b5d049f703feadc9bb0f11e85cc
ToppCell	Non-neuronal-Dividing-IPC-IPC-div1-28\|World / Primary Cells by Cluster	ESCO2 NUSAP1 HSP90B1 SMC4 CKAP2	1.07e-05	199	65	5	787688b68ae5d8768c0a24673ae07ab07616764a
ToppCell	Non-neuronal-Postmitotic\|World / Primary Cells by Cluster	CD84 INPP5D ENTPD1 APOC2 HPSE	1.07e-05	199	65	5	f6a9119ad32d9f0173c432de353b5315a7cf01ad
ToppCell	Non-neuronal-Dividing-IPC-IPC-div1\|World / Primary Cells by Cluster	ESCO2 NUSAP1 HSP90B1 SMC4 CKAP2	1.07e-05	199	65	5	72823f26ecabcae1b514b7629cfce010c97b929a
ToppCell	Control_saline-Mesenchymal_fibroblastic-Fibroblasts-Diff_MatrixFB\|Control_saline / Treatment groups by lineage, cell group, cell type	FBN1 SYTL4 PXDNL GYG1 FRMD3	1.07e-05	199	65	5	c2c42ecf20d1924edc2f899c01dfa5fcf3c210b9
ToppCell	Tracheal-10x5prime-Epithelial-Epi_airway_basal-Dividing_Basal\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	ESCO2 NUSAP1 SMC4 CKAP2 FAM83A	1.07e-05	199	65	5	fe22833e69928a1478df265e1c356c463611dedd
ToppCell	Non-neuronal\|World / Primary Cells by Cluster	ESCO2 NUSAP1 HSP90B1 SMC4 CKAP2	1.07e-05	199	65	5	165d9de6cedc79e13bb6fa244e8898a5dacc54ff
ToppCell	COVID-19-COVID-19_Mild-Lymphocyte-T/NK-dn_T\|COVID-19_Mild / Disease, condition lineage and cell class	CD84 FLNB HIVEP2 SMC4 N4BP1	1.07e-05	199	65	5	f307d4887b28cf60a591439e278fd668409cb104
ToppCell	10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_Prolif-G\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	ESCO2 NUSAP1 MARCHF9 SMC4 CKAP2	1.07e-05	199	65	5	53b3d35767889a152f1f38e8f6f0ba8f7a7690f2
ToppCell	Control_saline-Mesenchymal_fibroblastic\|Control_saline / Treatment groups by lineage, cell group, cell type	FBN1 SYTL4 PXDNL GYG1 FRMD3	1.10e-05	200	65	5	64ae5cf6cb4fc94cf1052abd82648f6b8e6445fe
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-1_mon-Proliferating\|1_mon / Sample Type, Dataset, Time_group, and Cell type.	ESCO2 NUSAP1 HSP90B1 SMC4 CKAP2	1.10e-05	200	65	5	762442d125e594fede4506b72da15563b1d8798a
ToppCell	Tracheal-NucSeq-Immune_Lymphocytic-T-T_CD4-T_reg\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	CD84 DOCK11 INPP5D ENTPD1 SMC4	1.10e-05	200	65	5	68589705dbc84482b6c0a1a27dd552492c4e8c3d
ToppCell	Control_saline-Mesenchymal_fibroblastic-Fibroblasts\|Control_saline / Treatment groups by lineage, cell group, cell type	FBN1 SYTL4 PXDNL GYG1 FRMD3	1.10e-05	200	65	5	a1fc74c1b27e104895910bc7cdce7ba33d30df7e
ToppCell	Control_saline-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB\|Control_saline / Treatment groups by lineage, cell group, cell type	FBN1 SYTL4 PXDNL GYG1 FRMD3	1.10e-05	200	65	5	bd8cf33502adea320e91ca2af14e1911d88ad374
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-1_mon-Proliferating-Cycling_Progenitors_nGenesUnder4k\|1_mon / Sample Type, Dataset, Time_group, and Cell type.	ESCO2 NUSAP1 HSP90B1 SMC4 CKAP2	1.10e-05	200	65	5	243c7f88befd402a57e9226706811c802b28e3fd
ToppCell	frontal_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Hpse_Cbln4\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	LANCL3 DOCK11 KCNS3 HPSE	2.43e-05	115	65	4	ac73aa06e617ed791c6ae9e38189bac74188c27b
ToppCell	frontal_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Hpse_Sema3c\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	LANCL3 DOCK11 KCNS3 HPSE	3.07e-05	122	65	4	eae9d94f8510ac0f434942451d55c7260977b178
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_1-Sox4-POLYDENDROCYTE_(Neurogenesis.Sox4.Cdc20)\|Hippocampus / BrainAtlas - Mouse McCarroll V32	ESCO2 NUSAP1 MYO1A CKAP2	4.05e-05	131	65	4	f9fb8d74ca720b81fd5910cc975510359a8ef751
ToppCell	facs-Skin-Anagen-3m-Myeloid\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CD84 INPP5D ENTPD1 APOC2	5.70e-05	143	65	4	250f60f06f262f00acd14b09b3ef90dbb9759336
ToppCell	facs-Skin-Anagen-3m-Myeloid-nan\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CD84 INPP5D ENTPD1 APOC2	5.70e-05	143	65	4	0c7c0d7ca040e87412295672cd1f065c0e941391
ToppCell	facs-Skin-Anagen-3m-Myeloid-macrophage\|Skin / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CD84 INPP5D ENTPD1 APOC2	5.70e-05	143	65	4	27f4896276342758651fe7a80d7408ac5e1be9c0
ToppCell	Fetal_29-31_weeks-Immune-mast_cell-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	CD84 SYTL4 INPP5D HPSE	6.01e-05	145	65	4	dc89d817a9bef24a07e992efdab4136f12ceb399
ToppCell	PND07-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NUSAP1 SMC4 CKAP2 INSYN2A	6.18e-05	146	65	4	45d7cb73776e60d22f335a651845e21e16948fcc
ToppCell	368C-Fibroblasts-Fibroblast-A_(Fibroblast_progenitors)-\|368C / Donor, Lineage, Cell class and subclass (all cells)	HSP90B1 SFRP4 FBN1 SGIP1	7.22e-05	152	65	4	3a1414ba6a4972698c3262a00b124428835c35cb
ToppCell	368C-Fibroblasts-Fibroblast-A_(Fibroblast_progenitors)\|368C / Donor, Lineage, Cell class and subclass (all cells)	HSP90B1 SFRP4 FBN1 SGIP1	7.22e-05	152	65	4	ee7855d76a49d07a032677a4dc83aa6116d50518
ToppCell	PND07-Endothelial-Endothelial_blood-vessel-Macrovascular_EC-AEC-AEC_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NUSAP1 FLNB CKAP2 FRMD3	7.79e-05	155	65	4	8e239470799426ea474a36f57e1b7e0d9365ca5f
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P5-P5_1\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	ESCO2 NUSAP1 PCDHGB1 CKAP2	9.02e-05	161	65	4	0dd1401b4c990d49fccb702a9f9867590a58e203
ToppCell	frontal_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Calb2_Pdlim5\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	LANCL3 DOCK11 KCNS3 HPSE	9.02e-05	161	65	4	bf70be1de418615b5442ec684552551edaf1f072
ToppCell	PND01-Immune-Immune_Myeloid-Megakaryocyte/Platelet-Megakaryocyte/Platelet\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CD84 SYTL4 HPSE JHY	9.02e-05	161	65	4	52556b89808e551540f33a13f57417a6696c2438
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P5-P5_1-Mitotic.MkI67_(Mitotic.MkI67)-\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	ESCO2 NUSAP1 PCDHGB1 CKAP2	9.02e-05	161	65	4	b6a31c033edc74f23a20aab1f18e80cc83ffee4c
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P5\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	ESCO2 NUSAP1 PCDHGB1 CKAP2	9.02e-05	161	65	4	efb811dda4d73107983a5f68302bdcf4f408d5b4
ToppCell	PND01-Immune-Immune_Myeloid-Megakaryocyte/Platelet-Megakaryocyte/Platelet-Megakaryocyte/Platelet_mature\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CD84 SYTL4 HPSE JHY	9.02e-05	161	65	4	54f156cf2bd5a6ba9a78ec4e3ee28b89998aec2e
ToppCell	Globus_pallidus-Macroglia-POLYDENDROCYTE-P5-P5_1-Mitotic.MkI67_(Mitotic.MkI67)\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	ESCO2 NUSAP1 PCDHGB1 CKAP2	9.02e-05	161	65	4	28d5dbd20c9f8e0069f172d552997a044790e1a7
ToppCell	PND01-Immune-Immune_Myeloid-Megakaryocyte/Platelet\|PND01 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CD84 SYTL4 HPSE JHY	9.02e-05	161	65	4	242891be849a4398fe8bea44875ae1ba57950944
ToppCell	LPS-antiTNF-Endothelial-Endothelial-FOXM1\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	ESCO2 NUSAP1 SMC4 CKAP2	9.46e-05	163	65	4	5285318c52aa31c9b22dc2ffff078e32e408604d
ToppCell	PND03-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_mature\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 LANCL3 SMC4	9.46e-05	163	65	4	7864e966c228282b4b63c43164dba3faba21026d
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Fibroblasts-MatrixFB_->_Myofibroblast\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	NUSAP1 SFRP4 KCNS3 INSYN2A	9.92e-05	165	65	4	15fd9d21dccfa80656a6fa3b72286a6a9252d403
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 SMC4 CKAP2	9.92e-05	165	65	4	eec2d327c94832d1390314c93ef6a2be4648478b
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Immune-Myeloid-Macrophage_Dendritic-Classical_Dendritic_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 FNBP1 INPP5D ENTPD1	1.02e-04	166	65	4	63dc58864268b4e7779e4c45155022556fc634f9
ToppCell	PND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_G2M\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 SMC4 CKAP2	1.02e-04	166	65	4	a41a20cef053c67da2d435e3e132ce28f1661c03
ToppCell	facs-Lung-ENDOMUCIN-18m-Myeloid-Classical_Monocyte\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CD84 DOCK11 APOC2 HPSE	1.02e-04	166	65	4	82fa07632f7e586698fbf37381715b40f9f6ae3a
ToppCell	facs-Lung-ENDOMUCIN-18m-Myeloid-classical_monocyte\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CD84 DOCK11 APOC2 HPSE	1.02e-04	166	65	4	0d03926452414f232c77fd15d5f48d148f9fca3b
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 SMC4 CKAP2	1.04e-04	167	65	4	50c29ea660bf07b890e4ac1a1985d0761d863dee
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Cycling_Endothelial_Cell\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 SMC4 CKAP2	1.04e-04	167	65	4	bc132b51dec4e8f1cd2b2cd89f83641976e09292
ToppCell	PND14-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-Treg-Treg_G2M\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 SMC4 CKAP2	1.04e-04	167	65	4	d21635df8b74189e3309eaf435af381fbe412574
ToppCell	renal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 SMC4 CKAP2	1.06e-04	168	65	4	d35944fd9fea9934ce1e76b2b35d48e2300cca61
ToppCell	renal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 SMC4 CKAP2	1.09e-04	169	65	4	b253a4a50c06d36228fcd5d856c57202cbac158f
ToppCell	PND07-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_G2M\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 GYG1 CKAP2	1.09e-04	169	65	4	563c267edaade0e5df192ad953801ef9768d4270
ToppCell	LPS-IL1RA+antiTNF-Endothelial-Endothelial-FOXM1\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	ESCO2 NUSAP1 SMC4 CKAP2	1.09e-04	169	65	4	e0607af8ae8609d43e26ff2a2cab92650bfcd5b7
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_S-high\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 HPSE TTLL7	1.09e-04	169	65	4	121768fc51fc3441ec725346a1bbe29e21d05971
ToppCell	Dividing_Macrophages-IPF_04\|World / lung cells shred on cell class, cell subclass, sample id	ESCO2 NUSAP1 SMC4 CKAP2	1.09e-04	169	65	4	bc859a103cad567caf50c3c3882d2d2017807c73
ToppCell	wk_15-18-Hematologic-Meg-ery-Megakaryocyte\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	CD84 SYTL4 HPSE FRMD3	1.09e-04	169	65	4	d571e84e01e3316748d4407ed98881b17484e035
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Immune-Myeloid-Macrophage_Dendritic-Cycling_Mononuclear_Phagocyte\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 INPP5D SMC4	1.09e-04	169	65	4	54b13ab02b4c187f4754045ecfcf409749e7ccc0
ToppCell	PND03-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_G2M\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 SMC4 CKAP2	1.11e-04	170	65	4	2d5e56eee0c3ce75a9641cc14dee0e0807141c32
ToppCell	renal_medulla_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	ESCO2 NUSAP1 SMC4 CKAP2	1.11e-04	170	65	4	21bfe070e63722672176052b386167ea4c3dc4e5
ToppCell	PND10-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_ILC-NK-ILC-ILC_G2M\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	ESCO2 NUSAP1 SMC4 FAM83A	1.11e-04	170	65	4	6b91d4cbe0697b65bfb2e099e7a9b39ea2fba3a9
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(15)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	NUSAP1 HSP90B1 SMC4 CKAP2	1.16e-04	172	65	4	7f3d0ef18f5df1ed80498d435b0378ca398c0b88
ToppCell	PND10-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF1-AF1_G2M\|PND10 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	NUSAP1 GYG1 TMEM119 CKAP2	1.16e-04	172	65	4	29c8510f26527d487d0fc3543102d067cdb281a6
ToppCell	P15-Mesenchymal-developing_mesenchymal_cell-mesenchymal_proliferating_cell\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	ESCO2 NUSAP1 LANCL3 GAS2	1.16e-04	172	65	4	7c238a7375341d4647ba7274d93fddfb6fae7ce4
Disease	opportunistic bacterial infectious disease (implicated_via_orthology)	SMARCC1 SMARCC2	1.45e-04	9	60	2	DOID:0050340 (implicated_via_orthology)
Disease	Coffin-Siris syndrome (implicated_via_orthology)	SMARCC1 SMARCC2	1.45e-04	9	60	2	DOID:1925 (implicated_via_orthology)
Disease	cognitive inhibition measurement	HIVEP2 PXDNL CTNNA1	1.46e-04	50	60	3	EFO_0007969
Disease	Intellectual Disability	HIVEP2 ENTPD1 RTTN MSL3 SMARCC2 BDNF	2.93e-04	447	60	6	C3714756
Disease	mean platelet volume	HIVEP2 SYTL4 DOCK11 PCDHGB1 RABEP1 RTTN DNM1L PACSIN2	1.03e-03	1020	60	8	EFO_0004584
Disease	urate measurement, bone density	FNBP1 KCNS3 CTNNA1 ENTPD4 DNAH14 JHY	1.59e-03	619	60	6	EFO_0003923, EFO_0004531
Disease	neutrophil count	CD84 FLNB HIVEP2 SGIP1 RABEP1 INPP5D TSHB USP47 SBNO2	1.81e-03	1382	60	9	EFO_0004833
Disease	Alzheimer disease, family history of Alzheimer’s disease	INPP5D CSTF1 APOC2	1.85e-03	119	60	3	EFO_0009268, MONDO_0004975
Disease	Alcoholic Intoxication	BDNF GABRA1	1.94e-03	32	60	2	C0001969
Disease	pulmonary fibrosis (is_marker_for)	DNM1L BDNF	1.94e-03	32	60	2	DOID:3770 (is_marker_for)

Protein segments in the cluster

Peptide	Gene	Start	Entry
ARKSFLTKYFNKQPY	ADNP	766	Q9H2P0
AKTAAQNLYEKTYLP	APOC2	51	P02655
PVSKGQLKQYFYETK	BDNF	171	P23560
KKYPSLANRNGTKYL	DNM1L	271	O00429
YKYMTLNPSTKRKNT	BAZ1B	296	Q9UIG0
YSLNPFKEQSFVYKK	B3GALT5	26	Q9Y2C3
ISKALDKQAFKYYPS	GKN3P	96	P0CG01
KYNVSTTPYLQSVKK	CKAP2	591	Q8WWK9
SLQSKALGYNYKAKS	RABEP1	416	Q15276
YSQETYSSTPKQKSK	INSYN2A	451	Q6ZSG2
PYEQAQYKKVTASKV	MSL3P1	201	P0C860
GSNHTYLKNTYNKPK	LEMD3	431	Q9Y2U8
KKQLKQPYTETKYRN	JHY	526	Q6NUN7
KNLYSKSPNYIRCIK	MYO1A	576	Q9UBC5
KKYEKNVYATTVGTP	GOLGA4	2141	Q13439
KNKTYSVEYLPKVTG	FLNB	311	O75369
VPFKLESTSKNYYKL	PCDHGB1	386	Q9Y5G3
PYEQAQYKKVTSSKF	MSL3	276	Q8N5Y2
AYLFAKAYLVSKKPQ	LANCL3	301	Q6ZV70
LIKKNNTYAPTATSY	GABRA1	361	P14867
PITIIFNKFSKYYQK	KCNS3	401	Q9BQ31
KPYLKEKSSATVYFQ	FAM83A	126	Q86UY5
INFYKKTYKQPHLQT	NUSAP1	396	Q9BXS6
GYKKVVNVSDLYKTP	ENTPD1	286	P49961
YQKKFKNSTYSRSSV	HPSE	156	Q9Y251
YFKYQVLAISTKNPL	MARCHF9	156	Q86YJ5
KDISTNYYASQKKTF	HSP90B1	671	P14625
KAKNVSSYEKTQSYP	PACSIN2	381	Q9UNF0
QKKRSAQYSYPVDKD	PXDNL	1316	A1KZ92
AFYKYAKSSQIKTVS	FRMD3	306	A2A2Y4
PSKQSNNKYAASSYL	IGLL5	166	B9A064
NYTYDPKTKSVKSEA	GYG1	221	P46976
YPLQLKYDSQKTFAK	DOCK11	646	Q5JSL3
QTVKASYVASTKYQK	CTNNA1	831	P35221
SYAKQLRNLSKKYQP	FNBP1	41	Q96RU3
TYSLQISSTPLYKKK	FBN1	2826	P35555
YYKNDGSKKPLRTIN	GAB4	81	Q2WGN9
TTNKKYYKKFSIPDL	DPCD	131	Q9BVM2
IRSYVYFNTPKNTKK	DNAH14	1506	Q0VDD8
QKSLTAKYQPKYRHI	ESCO2	141	Q56NI9
DYSKPSAKRAFKYIQ	CSTF1	201	Q05048
PRNASQKEIKKAYYQ	DNAJA3	101	Q96EY1
PDNYLVVSASYKAKK	GAS2	296	O43903
YNYQKAKTALKSPSV	RTTN	2171	Q86VV8
ADEAKKRSNPYVKTY	SYTL4	386	Q96C24
ESYKPQINSSYKELK	TDRD6	1211	O60522
FPVNYKSLKTALQVY	ENTPD4	506	Q9Y227
YTKQKATGMKYNLPS	INPP5D	656	Q92835
FTKNPYAASKKTIYT	CD84	266	Q9UIB8
TYADYVPSKSKIGKQ	SBNO2	201	Q9Y2G9
NGKNKSKTPEIYLAY	SMARCC1	476	Q92922
NGKNKSKTPEIYLAY	SMARCC2	451	Q8TAQ2
YKYTKSSQPAKFLVT	C17orf64	131	Q86WR6
KTPSQKRYVAYFAQV	TPTE	386	P56180
ALKNYTKSTLPVLYK	TIGD1	246	Q96MW7
LKKVSEQKPQATYYN	SGIP1	656	Q9BQI5
KKVKPTLATYLSKNY	SFRP4	181	Q6FHJ7
PAYKVGDKIATQKTY	TKTL2	311	Q9H0I9
QSPVSYSKRTAYQKA	USP47	831	Q96K76
KTSFYSICNKPSYQK	USP29	131	Q9HBJ7
PNKKYKTDSLKYIQS	USP29	191	Q9HBJ7
YKTYNITKSVAVNPK	SMC4	1266	Q9NTJ3
KTNYCTKPQKSYLVG	TSHB	121	P01222
KPNYVQQATFKSSVY	HIVEP2	1656	P31629
VITRQKQKASAYYPS	TMEM119	116	Q4V9L6
EKQVTYNLKPSNHYK	TTLL7	576	Q6ZT98
TVYPETNKTKNKGVY	N4BP1	401	O75113
DKKYNYPQSHKLVNS	N4BP2	816	Q86UW6