Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	extracellular matrix structural constituent conferring tensile strength	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	2.23e-08	46	77	6	GO:0030020
GeneOntologyMolecularFunction	extracellular matrix structural constituent	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	8.76e-05	188	77	6	GO:0005201
GeneOntologyBiologicalProcess	RNA splicing	HABP4 SRSF2 RBMXL3 DAZAP1 DDX42 UPF1 HNRNPUL1 PDCD7 RBM47 HNRNPA1L3 SRSF9 HNRNPH1 HNRNPH2 METTL14 SYNCRIP	4.47e-10	502	77	15	GO:0008380
GeneOntologyBiologicalProcess	mRNA processing	HABP4 XRN2 SRSF2 RBMXL3 DAZAP1 CPSF6 DDX42 UPF1 HNRNPUL1 RBM47 HNRNPA1L3 SRSF9 HNRNPH1 METTL14 SYNCRIP	1.60e-09	551	77	15	GO:0006397
GeneOntologyBiologicalProcess	mRNA splicing, via spliceosome	SRSF2 RBMXL3 DAZAP1 DDX42 UPF1 HNRNPUL1 RBM47 HNRNPA1L3 SRSF9 HNRNPH1 METTL14 SYNCRIP	8.30e-09	358	77	12	GO:0000398
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	SRSF2 RBMXL3 DAZAP1 DDX42 UPF1 HNRNPUL1 RBM47 HNRNPA1L3 SRSF9 HNRNPH1 METTL14 SYNCRIP	8.30e-09	358	77	12	GO:0000377
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions	SRSF2 RBMXL3 DAZAP1 DDX42 UPF1 HNRNPUL1 RBM47 HNRNPA1L3 SRSF9 HNRNPH1 METTL14 SYNCRIP	9.40e-09	362	77	12	GO:0000375
GeneOntologyBiologicalProcess	regulation of RNA splicing	HABP4 SRSF2 RBMXL3 DAZAP1 UPF1 RBM47 SRSF9 HNRNPH1 HNRNPH2	7.76e-08	207	77	9	GO:0043484
GeneOntologyBiologicalProcess	mRNA metabolic process	HABP4 XRN2 SRSF2 RBMXL3 DAZAP1 CPSF6 DDX42 TNKS1BP1 UPF1 HNRNPUL1 RBM47 HNRNPA1L3 SRSF9 HNRNPH1 METTL14 SYNCRIP	2.18e-07	917	77	16	GO:0016071
GeneOntologyBiologicalProcess	regulation of mRNA splicing, via spliceosome	SRSF2 RBMXL3 DAZAP1 UPF1 RBM47 SRSF9	8.78e-06	129	77	6	GO:0048024
GeneOntologyBiologicalProcess	regulation of mRNA processing	SRSF2 RBMXL3 DAZAP1 UPF1 RBM47 SRSF9	2.78e-05	158	77	6	GO:0050684
GeneOntologyBiologicalProcess	RNA processing	HABP4 XRN2 SRSF2 RBMXL3 DAZAP1 CPSF6 DDX42 UPF1 HNRNPUL1 PDCD7 RBM47 HNRNPA1L3 SRSF9 HNRNPH1 HNRNPH2 METTL14 SYNCRIP	3.02e-05	1500	77	17	GO:0006396
GeneOntologyBiologicalProcess	regulation of mRNA metabolic process	SRSF2 RBMXL3 DAZAP1 TNKS1BP1 UPF1 RBM47 SRSF9 METTL14 SYNCRIP	3.97e-05	443	77	9	GO:1903311
GeneOntologyBiologicalProcess	cellular response to cycloheximide	KLF4 KLF2	4.12e-05	3	77	2	GO:0071409
GeneOntologyBiologicalProcess	positive regulation of RNA splicing	HABP4 RBMXL3 DAZAP1 UPF1	9.05e-05	63	77	4	GO:0033120
GeneOntologyBiologicalProcess	GABAergic neuron differentiation	NKX2-1 TLX3 ZSWIM6	9.57e-05	24	77	3	GO:0097154
GeneOntologyBiologicalProcess	response to cycloheximide	KLF4 KLF2	2.04e-04	6	77	2	GO:0046898
GeneOntologyBiologicalProcess	alternative mRNA splicing, via spliceosome	SRSF2 HNRNPUL1 RBM47 SRSF9	2.18e-04	79	77	4	GO:0000380
GeneOntologyBiologicalProcess	positive regulation of mRNA metabolic process	RBMXL3 DAZAP1 TNKS1BP1 UPF1 METTL14 SYNCRIP	4.16e-04	259	77	6	GO:1903313
GeneOntologyCellularComponent	collagen trimer	MSR1 COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	3.48e-08	88	77	7	GO:0005581
GeneOntologyCellularComponent	spliceosomal complex	SRSF2 RBMXL3 DDX42 UPF1 PDCD7 HNRNPA1L3 HNRNPH1 SYNCRIP	1.26e-06	215	77	8	GO:0005681
GeneOntologyCellularComponent	interchromatin granule	SRSF2 CPSF6	1.33e-04	5	77	2	GO:0035061
GeneOntologyCellularComponent	collagen-containing extracellular matrix	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 NTN3 HAPLN2 GPC2 COL1A2	1.41e-04	530	77	9	GO:0062023
GeneOntologyCellularComponent	extracellular matrix	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 NTN3 HAPLN2 GPC2 LRRC17 COL1A2	1.43e-04	656	77	10	GO:0031012
GeneOntologyCellularComponent	external encapsulating structure	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 NTN3 HAPLN2 GPC2 LRRC17 COL1A2	1.46e-04	658	77	10	GO:0030312
GeneOntologyCellularComponent	mRNA editing complex	RBM47 SYNCRIP	2.78e-04	7	77	2	GO:0045293
GeneOntologyCellularComponent	chromatin	PPP1R10 SRSF2 NKX2-1 CPSF6 TBX21 TLX3 POU3F2 TNKS1BP1 UPF1 IRX1 ARID1A KLF4 PINK1 SP7 KLF2	2.85e-04	1480	77	15	GO:0000785
GeneOntologyCellularComponent	perichromatin fibrils	SRSF2 CPSF6	3.70e-04	8	77	2	GO:0005726
GeneOntologyCellularComponent	ribonucleoprotein complex	SRSF2 RBMXL3 DAZAP1 ATXN2 CPSF6 DDX42 UPF1 HNRNPUL1 PDCD7 HNRNPA1L3 HNRNPH1 HNRNPH2 SYNCRIP	3.89e-04	1194	77	13	GO:1990904
GeneOntologyCellularComponent	endoplasmic reticulum lumen	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.41e-03	332	77	6	GO:0005788
Domain	Collagen	MSR1 COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	5.33e-08	85	76	7	IPR008160
Domain	Collagen	MSR1 COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	5.33e-08	85	76	7	PF01391
Domain	RRM_1	SRSF2 RBMXL3 DAZAP1 CPSF6 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	1.66e-07	208	76	9	PF00076
Domain	RRM	SRSF2 RBMXL3 DAZAP1 CPSF6 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	2.37e-07	217	76	9	SM00360
Domain	RRM_dom	SRSF2 RBMXL3 DAZAP1 CPSF6 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	3.47e-07	227	76	9	IPR000504
Domain	RRM	SRSF2 RBMXL3 DAZAP1 CPSF6 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	3.88e-07	230	76	9	PS50102
Domain	-	SRSF2 RBMXL3 DAZAP1 CPSF6 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	6.36e-07	244	76	9	3.30.70.330
Domain	Nucleotide-bd_a/b_plait	SRSF2 RBMXL3 DAZAP1 CPSF6 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	1.01e-06	258	76	9	IPR012677
Domain	zf-RNPHF	HNRNPH1 HNRNPH2	4.89e-05	3	76	2	PF08080
Domain	Znf_CHHC	HNRNPH1 HNRNPH2	4.89e-05	3	76	2	IPR012996
Domain	TSPN	COL24A1 COL9A1 COL21A1	1.08e-04	23	76	3	SM00210
Domain	HnRNP_R/Q_splicing_fac	RBM47 SYNCRIP	1.62e-04	5	76	2	IPR006535
Domain	Znf_SWIM	ZSWIM8 ZSWIM6	5.77e-04	9	76	2	IPR007527
Domain	ZF_SWIM	ZSWIM8 ZSWIM6	5.77e-04	9	76	2	PS50966
Domain	Fib_collagen_C	COL24A1 COL1A2	8.78e-04	11	76	2	IPR000885
Domain	COLFI	COL24A1 COL1A2	8.78e-04	11	76	2	PF01410
Domain	NC1_FIB	COL24A1 COL1A2	8.78e-04	11	76	2	PS51461
Domain	Fib_collagen_C	COL24A1 COL1A2	8.78e-04	11	76	2	PD002078
Domain	COLFI	COL24A1 COL1A2	8.78e-04	11	76	2	SM00038
Domain	Laminin_G	COL24A1 COL9A1 COL21A1	1.70e-03	58	76	3	IPR001791
Domain	-	COL24A1 COL9A1 COL21A1	6.85e-03	95	76	3	2.60.120.200
Domain	Homeobox_CS	NKX2-1 TLX3 POU3F2 IRX1	7.00e-03	186	76	4	IPR017970
Pathway	REACTOME_COLLAGEN_CHAIN_TRIMERIZATION	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.68e-08	44	55	6	M27812
Pathway	REACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	2.21e-07	67	55	6	M26999
Pathway	REACTOME_COLLAGEN_FORMATION	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.29e-06	90	55	6	M631
Pathway	REACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES	COL4A2 COL6A1 COL24A1 COL9A1 COL1A2	3.78e-06	61	55	5	M27103
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	SRSF2 CPSF6 DDX42 PDCD7 SRSF9 HNRNPH1 HNRNPH2 METTL14	1.10e-05	277	55	8	MM15414
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	SRSF2 CPSF6 DDX42 PDCD7 SRSF9 HNRNPH1 HNRNPH2 METTL14	1.28e-05	283	55	8	M13087
Pathway	REACTOME_COLLAGEN_CHAIN_TRIMERIZATION	COL4A2 COL6A1 COL9A1 COL1A2	1.89e-05	41	55	4	MM15538
Pathway	REACTOME_METABOLISM_OF_RNA	XRN2 SRSF2 CPSF6 DDX42 TNKS1BP1 UPF1 PDCD7 SRSF9 HNRNPH1 HNRNPH2 METTL14	1.98e-05	612	55	11	MM15547
Pathway	REACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES	COL4A2 COL6A1 COL9A1 COL1A2	4.18e-05	50	55	4	MM14796
Pathway	REACTOME_SCAVENGING_BY_CLASS_A_RECEPTORS	MSR1 COL4A2 COL1A2	5.21e-05	19	55	3	M27221
Pathway	WP_MRNA_PROCESSING	XRN2 SRSF2 RBMXL3 DAZAP1 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	5.57e-05	451	55	9	MM15946
Pathway	REACTOME_NCAM1_INTERACTIONS	COL4A2 COL6A1 COL9A1	6.11e-05	20	55	3	MM15061
Pathway	REACTOME_METABOLISM_OF_RNA	XRN2 SRSF2 CPSF6 DDX42 TNKS1BP1 UPF1 PDCD7 SRSF9 HNRNPH1 HNRNPH2 METTL14	9.15e-05	724	55	11	M16843
Pathway	REACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES	COL4A2 COL6A1 COL9A1 COL1A2	9.18e-05	61	55	4	MM14637
Pathway	REACTOME_COLLAGEN_DEGRADATION	COL4A2 COL6A1 COL9A1 COL1A2	1.11e-04	64	55	4	M26953
Pathway	REACTOME_MRNA_SPLICING	SRSF2 DDX42 PDCD7 SRSF9 HNRNPH1 HNRNPH2	1.26e-04	201	55	6	MM15411
Pathway	WP_MRNA_PROCESSING	XRN2 SRSF2 SRSF9 HNRNPH1 HNRNPH2	1.28e-04	126	55	5	M39406
Pathway	REACTOME_MRNA_SPLICING	SRSF2 DDX42 PDCD7 SRSF9 HNRNPH1 HNRNPH2	1.69e-04	212	55	6	M14033
Pathway	REACTOME_ECM_PROTEOGLYCANS	COL4A2 COL6A1 COL9A1 COL1A2	2.16e-04	76	55	4	M27219
Pathway	REACTOME_COLLAGEN_FORMATION	COL4A2 COL6A1 COL9A1 COL1A2	2.16e-04	76	55	4	MM14573
Pathway	REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS	COL4A2 COL6A1 COL9A1 COL1A2	2.16e-04	76	55	4	MM14867
Pathway	REACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS	COL4A2 COL6A1 COL9A1 COL1A2	3.32e-04	85	55	4	M16441
Pathway	REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH	COL4A2 COL6A1 COL9A1	4.30e-04	38	55	3	MM14969
Pathway	REACTOME_NCAM1_INTERACTIONS	COL4A2 COL6A1 COL9A1	5.79e-04	42	55	3	M7169
Pathway	WP_MIRNA_TARGETS_IN_ECM_AND_MEMBRANE_RECEPTORS	COL4A2 COL6A1 COL1A2	6.21e-04	43	55	3	M39565
Pathway	PID_SYNDECAN_1_PATHWAY	COL6A1 COL9A1 COL1A2	7.58e-04	46	55	3	M198
Pathway	REACTOME_ECM_PROTEOGLYCANS	COL6A1 COL9A1 COL1A2	8.07e-04	47	55	3	MM14925
Pathway	REACTOME_MRNA_SPLICING_MINOR_PATHWAY	SRSF2 DDX42 PDCD7	8.58e-04	48	55	3	MM15410
Pathway	REACTOME_MRNA_SPLICING_MINOR_PATHWAY	SRSF2 DDX42 PDCD7	9.67e-04	50	55	3	M5583
Pathway	REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.07e-03	300	55	6	M610
Pathway	REACTOME_COLLAGEN_DEGRADATION	COL4A2 COL6A1 COL1A2	1.15e-03	53	55	3	MM14566
Pathway	REACTOME_SIGNALING_BY_PDGF	COL4A2 COL6A1 COL9A1	1.42e-03	57	55	3	MM14713
Pathway	REACTOME_SIGNALING_BY_PDGF	COL4A2 COL6A1 COL9A1	1.49e-03	58	55	3	M2049
Pathway	REACTOME_ANCHORING_FIBRIL_FORMATION	COL4A2 COL1A2	1.52e-03	15	55	2	M27161
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION	SRSF2 CPSF6 SRSF9	1.81e-03	62	55	3	MM15426
Pathway	REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH	COL4A2 COL6A1 COL9A1	1.89e-03	63	55	3	M11187
Pathway	REACTOME_DEGRADATION_OF_THE_EXTRACELLULAR_MATRIX	COL4A2 COL6A1 COL9A1 COL1A2	2.15e-03	140	55	4	M587
Pathway	REACTOME_CROSSLINKING_OF_COLLAGEN_FIBRILS	COL4A2 COL1A2	2.20e-03	18	55	2	M27164
Pathway	REACTOME_CROSSLINKING_OF_COLLAGEN_FIBRILS	COL4A2 COL1A2	2.20e-03	18	55	2	MM14882
Pathway	REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION	SRSF2 CPSF6 SRSF9	2.26e-03	67	55	3	M27694
Pathway	PID_AVB3_INTEGRIN_PATHWAY	COL6A1 COL9A1 COL1A2	3.00e-03	74	55	3	M160
Pubmed	SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.	HABP4 SRSF2 DAZAP1 ATXN2 UPF1 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	3.43e-10	258	78	10	37794589
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	PPP1R10 XRN2 SRSF2 CPSF6 DDX42 TNKS1BP1 UPF1 GPC2 ARHGAP39 HNRNPUL1 ARID1A PDCD7 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	1.94e-09	1082	78	16	38697112
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	PPP1R10 XRN2 SRSF2 DAZAP1 ATXN2 CPSF6 DDX42 UPF1 HNRNPUL1 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	3.04e-09	807	78	14	22681889
Pubmed	ARIH2 Is a Vif-Dependent Regulator of CUL5-Mediated APOBEC3G Degradation in HIV Infection.	PTOV1 ZSWIM8 XRN2 SRSF2 DAZAP1 CPSF6 ZSWIM6 HNRNPUL1 HNRNPH1 SYNCRIP	4.36e-09	336	78	10	31253590
Pubmed	ATPase-Modulated Stress Granules Contain a Diverse Proteome and Substructure.	PPP1R10 DAZAP1 ATXN2 CPSF6 TNKS1BP1 UPF1 HNRNPUL1 HNRNPH2 SYNCRIP	3.86e-08	315	78	9	26777405
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	PPP1R10 XRN2 SRSF2 DAZAP1 CPSF6 KRT82 DDX42 GNAS HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 FAM83H SYNCRIP	5.98e-08	1024	78	14	24711643
Pubmed	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	XRN2 SRSF2 DAZAP1 ATXN2 CPSF6 DDX42 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	6.44e-08	714	78	12	28302793
Pubmed	Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.	XRN2 SHROOM3 SRSF2 CPSF6 DDX42 TNKS1BP1 UPF1 GNAS ARID1A HNRNPH1 SYNCRIP	7.41e-08	582	78	11	20467437
Pubmed	TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions.	PTOV1 XRN2 SRSF2 ATXN2 CPSF6 GAS1 UPF1 GNAS HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	1.32e-07	922	78	13	27609421
Pubmed	Functional association of human Ki-1/57 with pre-mRNA splicing events.	HABP4 SRSF9 SYNCRIP	2.16e-07	6	78	3	19523114
Pubmed	Identification of FUBP1 as a Long Tail Cancer Driver and Widespread Regulator of Tumor Suppressor and Oncogene Alternative Splicing.	XRN2 DAZAP1 ATXN2 UPF1 HNRNPUL1 SYNCRIP	2.30e-07	114	78	6	31553912
Pubmed	A large-scale in situ screen provides molecular evidence for the induction of eye anterior segment structures by the developing lens.	COL4A2 COL6A1 COL9A1 TMEM40 COL1A2	2.69e-07	61	78	5	11180952
Pubmed	Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.	PPP1R10 SRSF2 DAZAP1 CPSF6 DDX42 UPF1 GNAS ARID1A SRSF9 HNRNPH2 SYNCRIP	2.80e-07	665	78	11	30457570
Pubmed	Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.	TRAFD1 SRSF2 DAZAP1 ATXN2 CPSF6 TNKS1BP1 PGP HNRNPH1 HNRNPH2	2.86e-07	399	78	9	35987950
Pubmed	Dynamic protein-protein interaction wiring of the human spliceosome.	SRSF2 DDX42 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	3.16e-07	197	78	7	22365833
Pubmed	PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.	XRN2 SRSF2 ATXN2 CPSF6 KRT82 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	3.39e-07	678	78	11	30209976
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	XRN2 DAZAP1 DDX42 HNRNPUL1 ARID1A SRSF9 HNRNPH2	6.65e-07	220	78	7	35785414
Pubmed	Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.	PPP1R10 XRN2 ATXN2 CPSF6 TNKS1BP1 UPF1 GNAS HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 METTL14 FAM83H SYNCRIP	7.13e-07	1257	78	14	36526897
Pubmed	Proline-rich sequence recognition: II. Proteomics analysis of Tsg101 ubiquitin-E2-like variant (UEV) interactions.	ATXN2 TNKS1BP1 UPF1 HNRNPUL1	8.02e-07	32	78	4	19542561
Pubmed	A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.	SRSF2 RBMXL3 DAZAP1 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	1.16e-06	347	78	8	16033648
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	PPP1R10 SRSF2 ATXN2 CPSF6 UPF1 GNAS HNRNPUL1 ARID1A HNRNPH1 SYNCRIP	1.19e-06	615	78	10	31048545
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	XRN2 TRAFD1 SRSF2 TNKS1BP1 ARHGAP39 HNRNPUL1 PCDH7 SRSF9 HNRNPH1 WDR62 ZNF687	1.24e-06	774	78	11	15302935
Pubmed	Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.30e-06	153	78	6	25037231
Pubmed	Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.	PPP1R10 XRN2 DDX42 HNRNPUL1 SRSF9 HNRNPH1 SYNCRIP	1.33e-06	244	78	7	29884807
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	PPP1R10 XRN2 SRSF2 DAZAP1 ATXN2 CPSF6 DDX42 HNRNPUL1 ARID1A SRSF9 HNRNPH1 SYNCRIP	1.39e-06	954	78	12	36373674
Pubmed	A Compendium of RNA-Binding Proteins that Regulate MicroRNA Biogenesis.	ATXN2 CPSF6 UPF1 RBM47 HNRNPH1 HNRNPH2 SYNCRIP	1.73e-06	254	78	7	28431233
Pubmed	DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation.	XRN2 CPSF6 HNRNPH1 HNRNPH2 SYNCRIP	1.78e-06	89	78	5	22446626
Pubmed	Blocking PPARγ interaction facilitates Nur77 interdiction of fatty acid uptake and suppresses breast cancer progression.	UPF1 HNRNPUL1 HNRNPH1 HNRNPH2 SYNCRIP	1.89e-06	90	78	5	33087562
Pubmed	Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.	PPP1R10 XRN2 SRSF2 DAZAP1 ATXN2 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 WDR62 SYNCRIP	1.90e-06	809	78	11	32129710
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	PTOV1 PPP1R10 XRN2 SRSF2 DAZAP1 CPSF6 DDX42 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	2.02e-06	989	78	12	36424410
Pubmed	ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.	XRN2 DAZAP1 DDX42 TNKS1BP1 UPF1 GNAS HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2	2.23e-06	660	78	10	32780723
Pubmed	Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis.	XRN2 SRSF2 DAZAP1 HNRNPH1 HNRNPH2 SYNCRIP	2.56e-06	172	78	6	26336360
Pubmed	mTORC1 activity regulates post-translational modifications of glycine decarboxylase to modulate glycine metabolism and tumorigenesis.	XRN2 ATXN2 UPF1 HNRNPUL1 PCDH7 HNRNPH1 SYNCRIP	2.86e-06	274	78	7	34244482
Pubmed	Proteomic dissection of the von Hippel-Lindau (VHL) interactome.	COL4A2 COL6A1 TRAFD1 HNRNPH1 HNRNPH2	2.87e-06	98	78	5	21942715
Pubmed	Pro-prion, as a membrane adaptor protein for E3 ligase c-Cbl, facilitates the ubiquitination of IGF-1R, promoting melanoma metastasis.	PPP1R10 COL24A1 XKR7 PKDCC PDCD7 KLF4 SRSF9 SYDE1 HNRNPH1 COL1A2	3.27e-06	689	78	10	36543142
Pubmed	Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.	XRN2 ATXN2 CPSF6 DDX42 UPF1 HNRNPUL1 HNRNPH1 HNRNPH2 SYNCRIP	4.07e-06	551	78	9	34728620
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	XRN2 SRSF2 ATXN2 CPSF6 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	4.42e-06	713	78	10	29802200
Pubmed	Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.	SRSF2 CPSF6 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	4.83e-06	421	78	8	34650049
Pubmed	Comprehensive proteomic analysis of the human spliceosome.	SRSF2 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2	4.85e-06	109	78	5	12226669
Pubmed	Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy.	HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	4.85e-06	109	78	5	29511296
Pubmed	Regulation of endothelial hemoglobin alpha expression by Kruppel-like factors.	KLF4 KLF2	4.97e-06	2	78	2	28825355
Pubmed	Neural lineage-specific homeoprotein BRN2 is directly involved in TTF1 expression in small-cell lung cancer.	NKX2-1 POU3F2	4.97e-06	2	78	2	23358112
Pubmed	Search for SCA2 blood RNA biomarkers highlights Ataxin-2 as strong modifier of the mitochondrial factor PINK1 levels.	ATXN2 PINK1	4.97e-06	2	78	2	27597528
Pubmed	HIV vasculopathy: role of mononuclear cell-associated Krüppel-like factors 2 and 4.	KLF4 KLF2	4.97e-06	2	78	2	26372274
Pubmed	The Krüppel-like factor 4 controls biosynthesis of thyrotropin-releasing hormone during hypothalamus development.	TRH KLF4	4.97e-06	2	78	2	21182892
Pubmed	KLF2 and KLF4 control endothelial identity and vascular integrity.	KLF4 KLF2	4.97e-06	2	78	2	28239661
Pubmed	Defining the regulation of KLF4 expression and its downstream transcriptional targets in vascular endothelial cells.	KLF4 KLF2	4.97e-06	2	78	2	19968965
Pubmed	Sp7/Osterix induces the mouse pro-α2(I) collagen gene (Col1a2) expression via the proximal promoter in osteoblastic cells.	SP7 COL1A2	4.97e-06	2	78	2	25172663
Pubmed	Canonical BAF complex activity shapes the enhancer landscape that licenses CD8+ T cell effector and memory fates.	TBX21 ARID1A	4.97e-06	2	78	2	37315534
Pubmed	Krüppel-Like Factors Orchestrate Endothelial Gene Expression Through Redundant and Non-Redundant Enhancer Networks.	KLF4 KLF2	4.97e-06	2	78	2	36789992
Pubmed	Upf1 regulates neurite outgrowth and branching by transcriptional and post-transcriptional modulation of Arc.	ARC UPF1	4.97e-06	2	78	2	30584064
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	PPP1R10 XRN2 SRSF2 TLX3 DDX42 HNRNPUL1 ARID1A KLF4 SRSF9 HNRNPH1 HNRNPH2 ZNF687 SYNCRIP	5.74e-06	1294	78	13	30804502
Pubmed	Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes.	SRSF2 DDX42 HNRNPUL1 SRSF9 SYNCRIP	6.31e-06	115	78	5	17332742
Pubmed	Host cell interactome of HIV-1 Rev includes RNA helicases involved in multiple facets of virus production.	DAZAP1 CPSF6 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	7.23e-06	206	78	6	22174317
Pubmed	Nell1-deficient mice have reduced expression of extracellular matrix proteins causing cranial and vertebral defects.	COL6A1 COL9A1 NKX2-1 HAPLN2 SP7 COL1A2	8.07e-06	210	78	6	16537572
Pubmed	Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells.	UPF1 HNRNPUL1 HNRNPH2 SYNCRIP	8.45e-06	57	78	4	17932509
Pubmed	Vegfa regulates perichondrial vascularity and osteoblast differentiation in bone development.	GNAS SP7 COL1A2	8.64e-06	18	78	3	25977369
Pubmed	New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules.	SRSF2 DAZAP1 ATXN2 UPF1 HNRNPUL1 HNRNPH1 HNRNPH2 SYNCRIP	9.49e-06	462	78	8	31138677
Pubmed	Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.	XRN2 DAZAP1 ATXN2 CPSF6 HNRNPUL1 PDCD7	1.05e-05	220	78	6	24550385
Pubmed	Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.	COL4A2 COL6A1 COL24A1 COL21A1 COL1A2	1.38e-05	135	78	5	28675934
Pubmed	The transcriptional regulator MEIS2 sets up the ground state for palatal osteogenesis in mice.	COL9A1 SP7 COL1A2	1.40e-05	21	78	3	32169905
Pubmed	HEG1 Protects Against Atherosclerosis by Regulating Stable Flow-Induced KLF2/4 Expression in Endothelial Cells.	KLF4 KLF2	1.49e-05	3	78	2	38099436
Pubmed	hnRNPs H, H' and F behave differently with respect to posttranslational cleavage and subcellular localization.	HNRNPH1 HNRNPH2	1.49e-05	3	78	2	10456323
Pubmed	ORAI1 Activates Proliferation of Lymphatic Endothelial Cells in Response to Laminar Flow Through Krüppel-Like Factors 2 and 4.	KLF4 KLF2	1.49e-05	3	78	2	28167653
Pubmed	Transcription factor ELF4 controls the proliferation and homing of CD8+ T cells via the Krüppel-like factors KLF4 and KLF2.	KLF4 KLF2	1.49e-05	3	78	2	19412182
Pubmed	Bi-fated tendon-to-bone attachment cells are regulated by shared enhancers and KLF transcription factors.	KLF4 KLF2	1.49e-05	3	78	2	33448926
Pubmed	ERK5 regulates muscle cell fusion through Klf transcription factors.	KLF4 KLF2	1.49e-05	3	78	2	21316587
Pubmed	Methyl CpG binding protein 2 promotes colorectal cancer metastasis by regulating N6 -methyladenosine methylation through methyltransferase-like 14.	KLF4 METTL14	1.49e-05	3	78	2	34097350
Pubmed	Overlapping functions of Krüppel-like factor family members: targeting multiple transcription factors to maintain the naïve pluripotency of mouse embryonic stem cells.	KLF4 KLF2	1.49e-05	3	78	2	29739838
Pubmed	Hypoxic Cancer-Secreted Exosomal miR-182-5p Promotes Glioblastoma Angiogenesis by Targeting Kruppel-like Factor 2 and 4.	KLF4 KLF2	1.49e-05	3	78	2	32366676
Pubmed	Heterogeneous nuclear ribonucleoproteins F and H/H' show differential expression in normal and selected cancer tissues.	HNRNPH1 HNRNPH2	1.49e-05	3	78	2	14980514
Pubmed	Heterogeneous nuclear ribonucleoprotein H1/H2-dependent unsplicing of thymidine phosphorylase results in anticancer drug resistance.	HNRNPH1 HNRNPH2	1.49e-05	3	78	2	21068389
Pubmed	Heterogeneous nuclear ribonucleoproteins H, H', and F are members of a ubiquitously expressed subfamily of related but distinct proteins encoded by genes mapping to different chromosomes.	HNRNPH1 HNRNPH2	1.49e-05	3	78	2	7499401
Pubmed	The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation.	COL4A2 PPP1R10 XRN2 TRAFD1 DAZAP1 ATXN2 CPSF6 UPF1 HNRNPUL1 QSOX2 FAM83H	1.50e-05	1007	78	11	34597346
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	ZSWIM8 XRN2 SRSF2 DDX42 TNKS1BP1 UPF1 HNRNPUL1 ARID1A SYNCRIP	1.58e-05	653	78	9	22586326
Pubmed	Interaction of antiproliferative protein Tob with the CCR4-NOT deadenylase complex.	TNKS1BP1 HNRNPH1 HNRNPH2	1.62e-05	22	78	3	18377426
Pubmed	The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells.	SRSF2 CPSF6 UPF1 SRSF9 HNRNPH1 SYNCRIP	1.68e-05	239	78	6	26641092
Pubmed	High-throughput analyses of hnRNP H1 dissects its multi-functional aspect.	PTOV1 TRAFD1 DAZAP1 NTN3 DDX42 PKDCC TNKS1BP1 ZSWIM6 SYDE1 HNRNPH1 SYNCRIP	1.71e-05	1021	78	11	26760575
Pubmed	Charting the landscape of tandem BRCT domain-mediated protein interactions.	USP2 SRSF2 ATXN2 CPSF6 PGP HNRNPUL1 ARID1A SRSF9 COL1A2	1.93e-05	670	78	9	22990118
Pubmed	FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.	XRN2 DAZAP1 DDX42 HNRNPUL1 SRSF9 HNRNPH2	2.07e-05	248	78	6	27926873
Pubmed	HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.	PPP1R10 XRN2 CPSF6 DDX42 HNRNPUL1	2.14e-05	148	78	5	32538781
Pubmed	Mammalian SP/KLF transcription factors: bring in the family.	KLF4 SP7 KLF2	2.41e-05	25	78	3	15820306
Pubmed	WW domains provide a platform for the assembly of multiprotein networks.	DAZAP1 CPSF6 HNRNPUL1 ARID1A HNRNPH1	2.59e-05	154	78	5	16055720
Pubmed	Deleting an Nr4a1 Super-Enhancer Subdomain Ablates Ly6Clow Monocytes while Preserving Macrophage Gene Function.	KLF4 KLF2	2.97e-05	4	78	2	27814941
Pubmed	Collagen XXIV, a vertebrate fibrillar collagen with structural features of invertebrate collagens: selective expression in developing cornea and bone.	COL24A1 COL1A2	2.97e-05	4	78	2	12874293
Pubmed	miR-145 and miR-143 regulate odontoblast differentiation through targeting Klf4 and Osx genes in a feedback loop.	KLF4 SP7	2.97e-05	4	78	2	23430263
Pubmed	IMP3, NESP55, TTF-1 and CDX2 serve as an immunohistochemical panel in the distinction among small-cell carcinoma, gastrointestinal carcinoid, and pancreatic endocrine tumor metastasized to the liver.	NKX2-1 GNAS	2.97e-05	4	78	2	22495359
Pubmed	Endothelial cell activation by antiphospholipid antibodies is modulated by Kruppel-like transcription factors.	KLF4 KLF2	2.97e-05	4	78	2	21482710
Pubmed	The role of cell surface proteins gene expression in diagnosis, prognosis, and drug resistance of colorectal cancer: In silico analysis and validation.	QSOX2 COL1A2	2.97e-05	4	78	2	34592197
Pubmed	Thyroid bud morphogenesis requires CDC42- and SHROOM3-dependent apical constriction.	SHROOM3 NKX2-1	2.97e-05	4	78	2	26772200
Pubmed	Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.	XRN2 SRSF2 CPSF6 DDX42 RBM47 SRSF9 HNRNPH1 HNRNPH2 METTL14	3.50e-05	723	78	9	34133714
Pubmed	A census of human transcription factors: function, expression and evolution.	NKX2-1 TBX21 TLX3 SKOR1 KIAA1549 POU3F2 IRX1 KLF4 SP7 KLF2	3.54e-05	908	78	10	19274049
Pubmed	Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.	SRSF2 DAZAP1 ATXN2 CPSF6 UPF1 HNRNPUL1 HNRNPH1 HNRNPH2 SYNCRIP	3.58e-05	725	78	9	27025967
Pubmed	CRISPR activation screen identifies BCL-2 proteins and B3GNT2 as drivers of cancer resistance to T cell-mediated cytotoxicity.	TRAFD1 ATXN2 CPSF6 TNKS1BP1 GNAS HNRNPH1 SYNCRIP	4.37e-05	418	78	7	35338135
Pubmed	HSF1 phosphorylation establishes an active chromatin state via the TRRAP-TIP60 complex and promotes tumorigenesis.	SHROOM3 SRSF2 CPSF6 DACT2 UPF1 PGP SRSF9 HNRNPH1 ZNF687	4.85e-05	754	78	9	35906200
Pubmed	RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity.	SRSF2 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	4.85e-05	425	78	7	21081503
Pubmed	FBXO24 modulates mRNA alternative splicing and MIWI degradation and is required for normal sperm formation and male fertility.	SRSF2 SRSF9	4.94e-05	5	78	2	38470475
Pubmed	A differentially expressed murine RNA encoding a protein with similarities to two types of nucleic acid binding motifs.	SRSF2 SRSF9	4.94e-05	5	78	2	2030943
Pubmed	N-Myc regulates expression of pluripotency genes in neuroblastoma including lif, klf2, klf4, and lin28b.	KLF4 KLF2	4.94e-05	5	78	2	19495417
Pubmed	Vax1 Plays an Indirect Role in the Etiology of Murine Cleft Palate.	NKX2-1 GAS1	4.94e-05	5	78	2	28771384
Interaction	HNRNPUL1 interactions	XRN2 NKX2-1 CPSF6 TLX3 KLHDC7B HNRNPUL1 KLF4 SRSF9 HNRNPH1 HNRNPH2 METTL14 SYNCRIP	8.60e-09	351	77	12	int:HNRNPUL1
Interaction	DAZL interactions	ZSWIM8 DAZAP1 ATXN2 CPSF6 UPF1 HNRNPUL1 RBM47 SYNCRIP	8.19e-08	145	77	8	int:DAZL
Interaction	FUS interactions	PPP1R10 XRN2 SRSF2 NKX2-1 CPSF6 DDX42 UPF1 GNAS HNRNPUL1 ARID1A SRSF9 HNRNPH1 METTL14 PINK1 SYNCRIP	1.47e-07	757	77	15	int:FUS
Interaction	FUBP3 interactions	DAZAP1 ATXN2 CPSF6 UPF1 HNRNPUL1 RBM47 HNRNPH1 PINK1 SYNCRIP SP7	1.91e-07	297	77	10	int:FUBP3
Interaction	MIR29A interactions	CPSF6 UPF1 RBM47 HNRNPH1 HNRNPH2 SYNCRIP	1.01e-06	87	77	6	int:MIR29A
Interaction	RC3H2 interactions	XRN2 SRSF2 ATXN2 CPSF6 KRT82 TNKS1BP1 UPF1 HNRNPUL1 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	1.33e-06	667	77	13	int:RC3H2
Interaction	RBMX interactions	XRN2 SRSF2 NKX2-1 CPSF6 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 METTL14 PINK1	1.37e-06	461	77	11	int:RBMX
Interaction	MIR128-1 interactions	ATXN2 CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.40e-06	92	77	6	int:MIR128-1
Interaction	CELF1 interactions	XRN2 DAZAP1 ATXN2 CPSF6 UPF1 HNRNPUL1 RBM47 HNRNPH1 SYNCRIP	1.51e-06	288	77	9	int:CELF1
Interaction	XRN2 interactions	XRN2 CPSF6 UPF1 ARHGAP39 HNRNPUL1 SRSF9 SYDE1 HNRNPH1 SYNCRIP SP7	1.84e-06	381	77	10	int:XRN2
Interaction	FUBP1 interactions	XRN2 DAZAP1 ATXN2 UPF1 HNRNPUL1 PCDH7 PINK1 SYNCRIP SP7	2.70e-06	309	77	9	int:FUBP1
Interaction	SYNCRIP interactions	HABP4 XRN2 ATXN2 CPSF6 DDX42 UPF1 HNRNPUL1 PCDH7 HNRNPH1 HNRNPH2 METTL14 PINK1 SYNCRIP	3.14e-06	721	77	13	int:SYNCRIP
Interaction	SMG7 interactions	ZSWIM8 XRN2 ATXN2 CPSF6 UPF1 HNRNPUL1 ARID1A RBM47 SYNCRIP	3.50e-06	319	77	9	int:SMG7
Interaction	STIP1 interactions	XRN2 SRSF2 ATXN2 PKDCC UPF1 ARHGAP39 PGP HNRNPUL1 PCDH7 SRSF9 HNRNPH1 METTL14 FAM83H PINK1 SYNCRIP	5.16e-06	1006	77	15	int:STIP1
Interaction	MECP2 interactions	PPP1R10 XRN2 SRSF2 NKX2-1 CPSF6 DDX42 TNKS1BP1 UPF1 GPC2 ARHGAP39 HNRNPUL1 ARID1A PDCD7 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	5.56e-06	1287	77	17	int:MECP2
Interaction	SNRPC interactions	PPP1R10 HABP4 CPSF6 DDX42 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	6.60e-06	440	77	10	int:SNRPC
Interaction	ATXN1 interactions	PPP1R10 ZSWIM8 SRSF2 DAZAP1 ATXN2 CPSF6 DDX42 UPF1 GNAS ARID1A SRSF9 HNRNPH1 HNRNPH2 SYNCRIP SP7	7.62e-06	1039	77	15	int:ATXN1
Interaction	NCBP1 interactions	XRN2 ATXN2 CPSF6 UPF1 RBM47 SRSF9 HNRNPH1 METTL14 SYNCRIP	7.93e-06	353	77	9	int:NCBP1
Interaction	MIR29B1 interactions	UPF1 RBM47 HNRNPH1 HNRNPH2 SYNCRIP	8.75e-06	73	77	5	int:MIR29B1
Interaction	COL4A2 interactions	MSR1 COL4A2 COL9A1 COL21A1 COL1A2	1.00e-05	75	77	5	int:COL4A2
Interaction	HNRNPDL interactions	SRSF2 CPSF6 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 METTL14 SYNCRIP	1.01e-05	364	77	9	int:HNRNPDL
Interaction	MIR16-1 interactions	UPF1 RBM47 HNRNPH1 HNRNPH2 SYNCRIP	1.07e-05	76	77	5	int:MIR16-1
Interaction	MIR92A1 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.21e-05	78	77	5	int:MIR92A1
Interaction	RBMS1 interactions	DAZAP1 ATXN2 UPF1 HNRNPUL1 RBM47 HNRNPH1 SYNCRIP	1.43e-05	207	77	7	int:RBMS1
Interaction	ILF2 interactions	XRN2 SRSF2 ATXN2 NKX2-1 CPSF6 UPF1 HNRNPUL1 KLF4 HNRNPH1 METTL14 SYNCRIP	1.43e-05	590	77	11	int:ILF2
Interaction	COL9A1 interactions	COL4A2 COL6A1 COL9A1	1.49e-05	13	77	3	int:COL9A1
Interaction	MIR199A1 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.74e-05	84	77	5	int:MIR199A1
Interaction	MIR17 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.84e-05	85	77	5	int:MIR17
Interaction	MIR18B interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.84e-05	85	77	5	int:MIR18B
Interaction	MIR93 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.84e-05	85	77	5	int:MIR93
Interaction	HNRNPK interactions	PPP1R10 XRN2 SRSF2 DAZAP1 CPSF6 TNKS1BP1 UPF1 PCDH7 HNRNPH1 HNRNPH2 METTL14 PINK1 SYNCRIP	1.91e-05	853	77	13	int:HNRNPK
Interaction	MIR138-2 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	2.18e-05	88	77	5	int:MIR138-2
Interaction	SRSF9 interactions	HABP4 XRN2 SRSF2 CPSF6 HNRNPUL1 SRSF9 METTL14	2.37e-05	224	77	7	int:SRSF9
Interaction	MIR155 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	2.71e-05	92	77	5	int:MIR155
Interaction	HNRNPA2B1 interactions	XRN2 SRSF2 ATXN2 CPSF6 UPF1 PCDH7 SRSF9 HNRNPH1 HNRNPH2 METTL14 PINK1 SYNCRIP	2.72e-05	754	77	12	int:HNRNPA2B1
Interaction	MIR19B2 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	3.01e-05	94	77	5	int:MIR19B2
Interaction	MIRLET7F1 interactions	UPF1 RBM47 HNRNPH1 HNRNPH2 SYNCRIP	3.01e-05	94	77	5	int:MIRLET7F1
Interaction	OBSL1 interactions	PPP1R10 XRN2 SHROOM3 SRSF2 DAZAP1 CPSF6 KRT82 DDX42 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	3.42e-05	902	77	13	int:OBSL1
Interaction	MIRLET7C interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	3.50e-05	97	77	5	int:MIRLET7C
Interaction	MIRLET7F2 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	3.50e-05	97	77	5	int:MIRLET7F2
Interaction	RBM39 interactions	PPP1R10 XRN2 SRSF2 DAZAP1 ATXN2 CPSF6 DDX42 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 PINK1 SYNCRIP	3.55e-05	1042	77	14	int:RBM39
Interaction	CRY1 interactions	USP2 ZSWIM8 HNRNPH1 HNRNPH2 FAM83H SYNCRIP	3.64e-05	162	77	6	int:CRY1
Interaction	MIR128-2 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	3.86e-05	99	77	5	int:MIR128-2
Interaction	MIR19A interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	4.05e-05	100	77	5	int:MIR19A
Interaction	MIRLET7B interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	4.25e-05	101	77	5	int:MIRLET7B
Interaction	MIRLET7D interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	4.25e-05	101	77	5	int:MIRLET7D
Interaction	MIR25 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	4.25e-05	101	77	5	int:MIR25
Interaction	NONO interactions	PPP1R10 HABP4 NKX2-1 CPSF6 DDX42 PCDH7 HNRNPH1 HNRNPH2 METTL14 PINK1	4.42e-05	549	77	10	int:NONO
Interaction	MIR7-1 interactions	ATXN2 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	4.67e-05	103	77	5	int:MIR7-1
Interaction	MIR19B1 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	4.89e-05	104	77	5	int:MIR19B1
Interaction	MIR34A interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	4.89e-05	104	77	5	int:MIR34A
Interaction	RC3H1 interactions	SRSF2 ATXN2 CPSF6 TNKS1BP1 UPF1 HNRNPUL1 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	5.04e-05	677	77	11	int:RC3H1
Interaction	MYCN interactions	HABP4 XRN2 SHROOM3 SRSF2 DAZAP1 ATXN2 CPSF6 EFCC1 UPF1 HNRNPUL1 ARID1A SRSF9 HNRNPH1 HNRNPH2 SYNCRIP SP7	5.13e-05	1373	77	16	int:MYCN
Interaction	FXR1 interactions	HABP4 DAZAP1 ATXN2 CPSF6 KCNN1 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 PINK1	5.18e-05	679	77	11	int:FXR1
Interaction	VHL interactions	COL4A2 COL6A1 COL9A1 TRAFD1 ATXN2 DACT2 ARID1A KLF4 HNRNPH1 HNRNPH2	5.30e-05	561	77	10	int:VHL
Interaction	MIRLET7E interactions	UPF1 RBM47 HNRNPH1 HNRNPH2 SYNCRIP	5.35e-05	106	77	5	int:MIRLET7E
Interaction	PEG10 interactions	ATXN2 UPF1 HNRNPUL1 RBM47 HNRNPH1	5.35e-05	106	77	5	int:PEG10
Interaction	NUPR1 interactions	XRN2 DAZAP1 DDX42 TNKS1BP1 UPF1 GNAS HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	5.46e-05	683	77	11	int:NUPR1
Interaction	HNRNPA1 interactions	XRN2 DAZAP1 ATXN2 CPSF6 UPF1 HNRNPUL1 PCDH7 SRSF9 HNRNPH1 HNRNPH2 METTL14 PINK1 SYNCRIP	5.52e-05	945	77	13	int:HNRNPA1
Interaction	GLUD1 interactions	PPP1R10 NKX2-1 CPSF6 DDX42 ARHGAP39 METTL14 SP7	5.82e-05	258	77	7	int:GLUD1
Interaction	MIRLET7A1 interactions	CPSF6 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	5.85e-05	108	77	5	int:MIRLET7A1
Interaction	YAP1 interactions	PPP1R10 XRN2 SRSF2 CPSF6 POU3F2 TNKS1BP1 UPF1 GNAS HNRNPUL1 ARID1A SH3D21 HNRNPH1 PINK1 SYNCRIP	6.09e-05	1095	77	14	int:YAP1
Interaction	MIR34B interactions	ATXN2 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	6.39e-05	110	77	5	int:MIR34B
Interaction	MAGOH interactions	SRSF2 CPSF6 UPF1 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	6.73e-05	264	77	7	int:MAGOH
Interaction	ALG13 interactions	ATXN2 CPSF6 UPF1 ARID1A RBM47 SYNCRIP	7.18e-05	183	77	6	int:ALG13
Interaction	WWP2 interactions	PPP1R10 XRN2 SRSF2 DAZAP1 ATXN2 CPSF6 UPF1 GNAS HNRNPUL1 ARID1A HNRNPH1 SYNCRIP	7.71e-05	840	77	12	int:WWP2
Interaction	PHB1 interactions	COL6A1 SRSF2 DAZAP1 ATXN2 NKX2-1 CPSF6 UPF1 HNRNPUL1 ARID1A PCDH7 HNRNPH1 HNRNPH2 METTL14 SYNCRIP	7.99e-05	1123	77	14	int:PHB1
Interaction	CUL2 interactions	PTOV1 SRSF2 DAZAP1 HNRNPUL1 ARID1A KLF4 HNRNPH1 HNRNPH2 METTL14 SYNCRIP	8.17e-05	591	77	10	int:CUL2
Interaction	TIA1 interactions	SRSF2 DAZAP1 ATXN2 CPSF6 UPF1 HNRNPH1 SYNCRIP	8.69e-05	275	77	7	int:TIA1
Interaction	AR interactions	USP2 XRN2 DAZAP1 CPSF6 TLX3 DDX42 GNAS HNRNPUL1 ARID1A KLF4 SRSF9 HNRNPH1 HNRNPH2	9.03e-05	992	77	13	int:AR
Interaction	HDLBP interactions	PPP1R10 SRSF2 RBMXL3 DAZAP1 CPSF6 UPF1 GNAS RBM47 SRSF9 METTL14 PINK1 SYNCRIP	9.13e-05	855	77	12	int:HDLBP
Interaction	CDC5L interactions	XRN2 SHROOM3 SRSF2 CPSF6 DDX42 TNKS1BP1 UPF1 GNAS ARID1A SRSF9 HNRNPH1 SYNCRIP	9.13e-05	855	77	12	int:CDC5L
Interaction	PABPN1 interactions	ATXN2 CPSF6 UPF1 HNRNPH1 PINK1 SYNCRIP	9.35e-05	192	77	6	int:PABPN1
Interaction	PAIP2 interactions	ATXN2 UPF1 SRSF9 SYNCRIP	9.89e-05	63	77	4	int:PAIP2
Interaction	PPIE interactions	SRSF2 CPSF6 UPF1 HNRNPUL1 SRSF9 HNRNPH1 SYNCRIP	1.02e-04	282	77	7	int:PPIE
Interaction	EIF5A interactions	PPP1R10 XRN2 CPSF6 DDX42 PCDH7 SRSF9 METTL14	1.04e-04	283	77	7	int:EIF5A
Interaction	HSF1 interactions	XRN2 SRSF2 ATXN2 CPSF6 PGP HNRNPUL1 SRSF9 HNRNPH1 ZNF687 SYNCRIP	1.05e-04	609	77	10	int:HSF1
Interaction	NSRP1 interactions	PPP1R10 ATXN2 CPSF6 DDX42 UPF1 SYNCRIP	1.08e-04	197	77	6	int:NSRP1
Interaction	NXF2 interactions	ATXN2 UPF1 HNRNPUL1 FAM83H	1.12e-04	65	77	4	int:NXF2
Interaction	EIF4A3 interactions	SRSF2 CPSF6 UPF1 HNRNPUL1 SRSF9 HNRNPH1 HNRNPH2 PINK1 SYNCRIP	1.18e-04	499	77	9	int:EIF4A3
Interaction	HNRNPUL2 interactions	ATXN2 CPSF6 UPF1 HNRNPUL1 HNRNPH1 HNRNPH2 SYNCRIP	1.24e-04	291	77	7	int:HNRNPUL2
Interaction	COLGALT2 interactions	MSR1 COL4A2 COL6A1 COL21A1	1.26e-04	67	77	4	int:COLGALT2
Interaction	ECT2 interactions	XRN2 SRSF2 RBMXL3 UPF1 GNAS HNRNPUL1 ARID1A RBM47 SRSF9 HNRNPH2 FAM83H SYNCRIP	1.29e-04	887	77	12	int:ECT2
Interaction	MIR138-1 interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.33e-04	68	77	4	int:MIR138-1
Interaction	HNRNPC interactions	XRN2 CPSF6 ADAM30 UPF1 ARID1A RBM47 HNRNPH1 METTL14 PINK1 SYNCRIP	1.45e-04	634	77	10	int:HNRNPC
Interaction	MIR9-3 interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.49e-04	70	77	4	int:MIR9-3
Interaction	BRD7 interactions	XRN2 SRSF2 CPSF6 TLX3 HNRNPUL1 ARID1A HECA HNRNPH1 SYNCRIP SP7	1.51e-04	637	77	10	int:BRD7
Interaction	ZFR interactions	XRN2 CPSF6 UPF1 KLF4 RBM47 HNRNPH1 SP7	1.52e-04	301	77	7	int:ZFR
Interaction	SNRPB interactions	PPP1R10 CPSF6 DDX42 UPF1 PDCD7 SRSF9 HNRNPH1 METTL14 SYNCRIP	1.54e-04	517	77	9	int:SNRPB
Interaction	MIR140 interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.58e-04	71	77	4	int:MIR140
Interaction	MIR122 interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.58e-04	71	77	4	int:MIR122
Interaction	MIR29B2 interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.58e-04	71	77	4	int:MIR29B2
Interaction	TAF15 interactions	NKX2-1 CPSF6 DDX42 HNRNPUL1 ARID1A SRSF9 HNRNPH1 SYNCRIP	1.64e-04	408	77	8	int:TAF15
Interaction	MIR20A interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.85e-04	74	77	4	int:MIR20A
Interaction	MIR15A interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.95e-04	75	77	4	int:MIR15A
Interaction	ARIH2 interactions	XRN2 SRSF2 DAZAP1 CPSF6 HNRNPUL1 HNRNPH1 SYNCRIP	1.97e-04	314	77	7	int:ARIH2
Interaction	HNRNPR interactions	XRN2 ATXN2 CPSF6 UPF1 SRSF9 HNRNPH1 METTL14 PINK1 SYNCRIP	2.01e-04	536	77	9	int:HNRNPR
Interaction	BGN interactions	COL4A2 COL6A1 COL1A2	2.02e-04	30	77	3	int:BGN
Interaction	MIR7-3 interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	2.05e-04	76	77	4	int:MIR7-3
Interaction	MIR199A2 interactions	UPF1 HNRNPH1 HNRNPH2 SYNCRIP	2.05e-04	76	77	4	int:MIR199A2
Cytoband	8q24.3	ARC ARHGAP39 OPLAH FAM83H	4.31e-05	113	78	4	8q24.3
Cytoband	7q22.1	GPC2 LRRC17 COL1A2	9.66e-04	113	78	3	7q22.1
Cytoband	Ensembl 112 genes in cytogenetic band chr8q24	ARC ARHGAP39 OPLAH FAM83H	3.20e-03	355	78	4	chr8q24
GeneFamily	Collagens	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	3.60e-09	46	52	6	490
GeneFamily	RNA binding motif containing	SRSF2 RBMXL3 DAZAP1 CPSF6 RBM47 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	8.76e-09	213	52	9	725
GeneFamily	Zinc fingers SWIM-type\|Mitogen-activated protein kinase kinase kinases	ZSWIM8 ZSWIM6	2.88e-04	9	52	2	90
GeneFamily	RNA binding motif containing\|Serine and arginine rich splicing factors	SRSF2 SRSF9	5.26e-04	12	52	2	737
GeneFamily	Zinc fingers C2H2-type\|Kruppel like factors	KLF4 KLF2	1.21e-03	18	52	2	624
Coexpression	NABA_COLLAGENS	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	3.68e-09	44	78	6	M3005
Coexpression	NABA_COLLAGENS	COL4A2 COL6A1 COL24A1 COL9A1 COL1A2	1.81e-07	43	78	5	MM17060
Coexpression	NABA_CORE_MATRISOME	COL4A2 COL6A1 COL24A1 COL9A1 COL21A1 NTN3 HAPLN2 COL1A2	1.65e-06	275	78	8	M5884
Coexpression	NABA_CORE_MATRISOME	COL4A2 COL6A1 COL24A1 COL9A1 NTN3 HAPLN2 COL1A2	1.61e-05	270	78	7	MM17057
Coexpression	TABULA_MURIS_SENIS_MAMMARY_GLAND_BASAL_CELL_AGEING	PTOV1 COL6A1 GAS1 ARC KLF4 PINK1 KLF2	4.95e-05	322	78	7	MM3786
Coexpression	CHIARADONNA_NEOPLASTIC_TRANSFORMATION_KRAS_DN	COL4A2 SHROOM3 GAS1 KLF2 COL1A2	6.46e-05	141	78	5	M10381
Coexpression	HE_LIM_SUN_FETAL_LUNG_C1_EARLY_TIP_CELL	COL9A1 KCNN1 GPC2 PGP HNRNPA1L3	7.38e-05	145	78	5	M45693
Coexpression	CHIARADONNA_NEOPLASTIC_TRANSFORMATION_KRAS_DN	COL4A2 SHROOM3 GAS1 KLF2 COL1A2	7.62e-05	146	78	5	MM973
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	MSR1 GALNT17 COL21A1 GAS1 SERTAD4 PCDH7 LRRC17 COL1A2	1.59e-09	190	78	8	7986586b7c82e91c71102cc8c4d7a689ae63ab4d
ToppCell	356C-Fibroblasts-Fibroblast-C_(Myofibroblast)-\|356C / Donor, Lineage, Cell class and subclass (all cells)	COL4A2 COL6A1 COL21A1 GAS1 PKDCC PCDH7 COL1A2	2.70e-08	177	78	7	cdfd2f0ee2f692271b1525e414b0f645cdadb1f6
ToppCell	356C-Fibroblasts-Fibroblast-C_(Myofibroblast)\|356C / Donor, Lineage, Cell class and subclass (all cells)	COL4A2 COL6A1 COL21A1 GAS1 PKDCC PCDH7 COL1A2	2.70e-08	177	78	7	db222faaecbe5600da39277243c4e7e764eb63c9
ToppCell	10x3'2.3-week_12-13-Mesenchymal_fibro-stroma-endosteal_fibroblast\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	COL4A2 COL6A1 COL21A1 GAS1 DACT2 LRRC17 COL1A2	4.24e-08	189	78	7	c392491aabe8a3e90974ab2ea123bbbe5200439d
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	MSR1 GALNT17 COL21A1 GAS1 PCDH7 LRRC17 COL1A2	4.56e-08	191	78	7	fa380a8752de158974b2ae5e741573439719cc0d
ToppCell	Fetal_29-31_weeks-Mesenchymal-matrix_fibroblast_2_cell\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	COL6A1 GALNT17 COL21A1 GAS1 PCDH7 LRRC17 COL1A2	4.72e-08	192	78	7	8d56e360ebc624ca4cd7f0af4f3cc599c244f134
ToppCell	facs-Pancreas-Exocrine-3m-Mesenchymal-pancreatic_stellate_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A2 COL6A1 GALNT17 GAS1 PCDH7 LRRC17 COL1A2	4.72e-08	192	78	7	8937a59f6bbe07f671bdabbd3707dc9c17a14cd9
ToppCell	facs-Pancreas-Exocrine-3m-Mesenchymal\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A2 COL6A1 GALNT17 GAS1 PCDH7 LRRC17 COL1A2	4.72e-08	192	78	7	e4a7f2673f801b008ca67291db2fb2b9fd2955b8
ToppCell	facs-Pancreas-Exocrine-3m-Mesenchymal-pancreatic_stellate_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A2 COL6A1 GALNT17 GAS1 PCDH7 LRRC17 COL1A2	4.72e-08	192	78	7	ac1477433704573f95111eee6263b93668d2845e
ToppCell	Mesenchymal-matrix_fibroblast_2_cell\|World / Lineage, Cell type, age group and donor	COL6A1 GALNT17 COL21A1 GAS1 PCDH7 LRRC17 COL1A2	4.72e-08	192	78	7	a769158c49d2b208c4224d85e7ae68c85cc372ed
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	MSR1 COL6A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	4.89e-08	193	78	7	9f69edc97b868d23998abc98928a2e89a885ef8a
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	MSR1 COL6A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	5.07e-08	194	78	7	71d3c7448b1734de54187f902f65649f9283bd4c
ToppCell	Fetal_29-31_weeks-Mesenchymal-matrix_fibroblast_2_cell-D150\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	COL6A1 GALNT17 COL21A1 GAS1 PCDH7 LRRC17 COL1A2	5.07e-08	194	78	7	439d3f17c1f4736122b330e98add9292c7036a8e
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	MSR1 COL6A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	5.07e-08	194	78	7	8c37bedb23285735ff3828db3889897fada8c95d
ToppCell	10x3'2.3-week_17-19-Mesenchymal_osteo-stroma-osteoblast_precursor\|week_17-19 / cell types per 3 fetal stages;per 3',per 5'	COL6A1 COL21A1 GAS1 PCDH7 LRRC17 SP7 COL1A2	5.25e-08	195	78	7	ec12cfb2fce44cc2de4e198ef5af075e626f0329
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	5.44e-08	196	78	7	1450cb69c5bf469e97c03bf1890f6f7c54165b8a
ToppCell	15-Airway-Mesenchymal-Mesenchyme_SERPINF1-high\|Airway / Age, Tissue, Lineage and Cell class	COL6A1 COL21A1 GAS1 PKDCC KLF4 LRRC17 COL1A2	5.83e-08	198	78	7	3d76393e72eed59b4dd16130ef5dd1d331ba5711
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	5.83e-08	198	78	7	17dc055e2a289496d9c5cdbf3297bdf906dc6d22
ToppCell	Fetal_29-31_weeks-Mesenchymal\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	COL4A2 COL6A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	5.83e-08	198	78	7	21cf4d81386761d09d0f6829c01c198e5524176d
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A2 COL6A1 COL9A1 COL21A1 PCDH7 LRRC17 COL1A2	6.03e-08	199	78	7	36c1deac7ef0f9ebde6b2f7a63f7daa03d8c139a
ToppCell	10x3'2.3-week_12-13-Mesenchymal_fibro-stroma-arteriolar_fibroblast\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	COL4A2 COL6A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	6.25e-08	200	78	7	fee22a6a6c7b93af204b5b56f2c34f1411500e18
ToppCell	10x3'2.3-week_12-13-Mesenchymal_fibro-stroma\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	COL4A2 COL6A1 COL21A1 GAS1 PCDH7 LRRC17 COL1A2	6.25e-08	200	78	7	64d2941689d7ca8af54f9ba21c5aeabf719084ef
ToppCell	10x3'2.3-week_12-13-Mesenchymal_fibro\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	COL4A2 COL6A1 COL21A1 GAS1 PCDH7 LRRC17 COL1A2	6.25e-08	200	78	7	76f3043cb88071256ff661885fe5a82a54f5b733
ToppCell	Children_(3_yrs)-Mesenchymal-chondrocyte\|Children_(3_yrs) / Lineage, Cell type, age group and donor	COL6A1 COL24A1 GALNT17 COL21A1 PCDH7 COL1A2	3.42e-07	157	78	6	f147e24f2ece82e1c54750868954d09b3c461804
ToppCell	PND07-Mesenchymal-Mesenchymal_structural-Fibroblastic-AF2-AF2_prolif\|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	COL6A1 GALNT17 SERTAD4 WDR62 SP7 COL1A2	3.69e-07	159	78	6	7ed659163f45e0c4df4782997c0786900c8186c8
ToppCell	E16.5-samps-Epithelial-Alveolar_epithelial_precursor-Uncommitted_AE_cell\|E16.5-samps / Age Group, Lineage, Cell class and subclass	COL9A1 NKX2-1 DACT2 ARC IRX1 RBM47	5.46e-07	170	78	6	5a64e05c263df915085988d881808221e2c0f2e2
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5\|Hippocampus / BrainAtlas - Mouse McCarroll V32	XRN2 SRSF2 DAZAP1 GPC2 HNRNPH1 SYNCRIP	7.63e-07	180	78	6	44988c34861df359a68376500c42a64fbcc4b431
ToppCell	lymphoid-T_cell-pro-T_cell\|lymphoid / Lineage, cell class and subclass	COL4A2 COL24A1 ZSWIM8 KIAA1549 HNRNPH1	8.23e-07	98	78	5	4da11182885d5f2673e85bd9c5717939b0268427
ToppCell	normal_Lung-Fibroblasts-Myofibroblasts\|normal_Lung / Location, Cell class and cell subclass	COL6A1 COL24A1 COL9A1 PCDH7 LRRC17 COL1A2	8.67e-07	184	78	6	0b336489c10e8c3c957795dd845454f03404382b
ToppCell	Mesenchymal-myofibroblast_cell\|World / Lineage, Cell type, age group and donor	COL4A2 COL6A1 COL24A1 GALNT17 EFCC1 COL1A2	1.01e-06	189	78	6	44e37f88137bb249933eb615235b2cf2ae7f3925
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Diff_MatrixFB\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL6A1 GALNT17 COL21A1 GAS1 PCDH7 COL1A2	1.01e-06	189	78	6	a153b83314cf52808f685296cff8c95af3f4983d
ToppCell	LPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB\|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL6A1 GALNT17 COL21A1 GAS1 PCDH7 COL1A2	1.08e-06	191	78	6	b13229bb7f3713a392271aaf5dbae3edd1b9fe5a
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW16-OPC_related-OPC\|GW16 / Sample Type, Dataset, Time_group, and Cell type.	COL9A1 NKX2-1 HAPLN2 ARC IRX1 PCDH7	1.11e-06	192	78	6	5d9bc234f01c73b2531edf8960588d5b6cf260a7
ToppCell	Neuron-Postmitotic-Excitatory_Neuron_-Deep_Layer-27\|World / Primary Cells by Cluster	PTOV1 SRSF2 ARC GPC2 PGP SRSF9	1.11e-06	192	78	6	cf989f26c0ebdc0cd12e1e41958f063e4fa3e468
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Matrix_Fibroblast\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL6A1 GALNT17 COL21A1 GAS1 PCDH7 COL1A2	1.11e-06	192	78	6	dcd924d6eb67d33ee9f5d3e8ab6e1d4283d6b708
ToppCell	Fetal_brain-fetalBrain_Zhong_nature-GW16-OPC_related\|GW16 / Sample Type, Dataset, Time_group, and Cell type.	COL9A1 NKX2-1 HAPLN2 ARC IRX1 PCDH7	1.11e-06	192	78	6	e6d115143ced6a0d9fe7c98acd3f730bac83f66b
ToppCell	droplet-Bladder-nan-3m\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL4A2 PPP1R10 COL6A1 GNAS KLF2 COL1A2	1.15e-06	193	78	6	e55f79bad6888b84b0ad5fccded498b170e3c6dc
ToppCell	Children_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell\|Children_(3_yrs) / Lineage, Cell type, age group and donor	COL6A1 GALNT17 COL21A1 EFCC1 PCDH7 COL1A2	1.15e-06	193	78	6	99525545552b371c86b18b6ea6f4897dc6e9a9ec
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	MSR1 COL24A1 COL21A1 PCDH7 LRRC17 COL1A2	1.18e-06	194	78	6	a3e5a15cf6c1361207f661ee15eb634f77daf1cb
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature3_(17)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 COL21A1 PCDH7 LRRC17 COL1A2	1.22e-06	195	78	6	1cdf5f296029ae424d9dba42e86a6d111e4896e6
ToppCell	15-Trachea-Mesenchymal\|Trachea / Age, Tissue, Lineage and Cell class	COL4A2 COL6A1 GAS1 PKDCC LRRC17 COL1A2	1.25e-06	196	78	6	7e178c76285e61c721c38d7a995ebf89dc428f9f
ToppCell	PCW_07-8.5-Mesenchymal\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 COL21A1 PCDH7 LRRC17 COL1A2	1.25e-06	196	78	6	8e10802f52e5e1853ea4ad34bf9a32a34e6112b5
ToppCell	Mesenchymal_cells-Fibro/Chondro_p.\|World / Lineage and Cell class	COL6A1 GAS1 KIAA1549 KLF4 KLF2 COL1A2	1.25e-06	196	78	6	ddc168849e0e97005a111be004463bb72d433853
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	MSR1 COL6A1 COL24A1 PCDH7 LRRC17 COL1A2	1.25e-06	196	78	6	22538376a95fe3afe8639a216a5497087aa94110
ToppCell	LPS_IL1RA_TNF\|World / Treatment groups by lineage, cell group, cell type	PPP1R10 COL6A1 COL21A1 DACT2 IRX1 COL1A2	1.29e-06	197	78	6	0a6550dce156fc81f15b1e7830d331ca50d87d06
ToppCell	Tracheal-10x5prime-Stromal-Peri/Epineurial_\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	COL6A1 COL24A1 COL21A1 PKDCC WDR62 COL1A2	1.29e-06	197	78	6	2cb1f557ce1400398975de94638126b4522567f3
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature3_(17)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 COL21A1 PCDH7 LRRC17 COL1A2	1.29e-06	197	78	6	31a1852911bda38543916585fda34255fd62a134
ToppCell	PCW_13-14-Mesenchymal\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 COL21A1 PCDH7 LRRC17 COL1A2	1.29e-06	197	78	6	73a2085d2682d636726a5432d572ae2a3fbe1c3f
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL24A1 GALNT17 COL21A1 PCDH7 LRRC17 COL1A2	1.29e-06	197	78	6	0034bae02ee7fcfea520d453ca3c842ab6963b12
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 COL21A1 PCDH7 LRRC17 COL1A2	1.29e-06	197	78	6	11a4c417f035e554431a8f03be13b5eefa3530c0
ToppCell	11.5-Airway-Mesenchymal-Mesenchyme_SERPINF1-high\|Airway / Age, Tissue, Lineage and Cell class	GALNT17 GAS1 SERTAD4 PKDCC KLF4 COL1A2	1.29e-06	197	78	6	9a053a32ff9c3a85ef9a3382453acd619cc48546
ToppCell	10x3'2.3-week_14-16-Mesenchymal_osteo-stroma-osteoblast_precursor\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	COL6A1 GAS1 PCDH7 LRRC17 SP7 COL1A2	1.33e-06	198	78	6	9d61483b0decac2fe90045b3474843360b2c49b3
ToppCell	5'-GW_trimst-1.5-SmallIntestine-Mesenchymal\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A2 COL6A1 COL9A1 COL21A1 LRRC17 COL1A2	1.37e-06	199	78	6	84545ced0c792bc77980a50d65e484eab648d47e
ToppCell	Mesenchymal\|World / Lineage, Cell type, age group and donor	COL4A2 COL6A1 GALNT17 COL21A1 PCDH7 COL1A2	1.37e-06	199	78	6	4bac110c2b3609f6ee5d0e3275da0824a6240270
ToppCell	wk_15-18-Mesenchymal-Fibroblast-Adventitial_fibro\|wk_15-18 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL21A1 GAS1 PKDCC LRRC17 COL1A2	1.37e-06	199	78	6	8de6d7b2067b22cb9b5f01aa56a3803aebc4406d
ToppCell	PCW_10-12-Mesenchymal\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL6A1 COL24A1 COL21A1 PCDH7 LRRC17 COL1A2	1.37e-06	199	78	6	a09292de4c4447b8eee55d401808e43b817321cc
ToppCell	5'-GW_trimst-1.5-SmallIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL6A1 COL24A1 COL9A1 PKDCC LRRC17 COL1A2	1.37e-06	199	78	6	da016849b804fbf80edbfa8f8f56c9df8bbf2d51
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-6m-Neuroepithelial\|6m / Sample Type, Dataset, Time_group, and Cell type.	COL6A1 COL21A1 KLF4 PCDH7 LRRC17 COL1A2	1.41e-06	200	78	6	2cc98abf11f5b58707de45a2282f03d47f00f035
ToppCell	Bronchus_Control_(B.)-Stromal-TX-Fibroblasts-2,_SCARA5\|Bronchus_Control_(B.) / Sample group, Lineage and Cell type	COL4A2 COL6A1 GAS1 PKDCC LRRC17 COL1A2	1.41e-06	200	78	6	2022df85df94ab8cbb4e80e3fe9894c01051c5e0
ToppCell	15-Airway\|15 / Age, Tissue, Lineage and Cell class	COL6A1 COL9A1 COL21A1 GAS1 KLF4 COL1A2	1.41e-06	200	78	6	ba4b8d5becf81351901c2ecac74ffa28e29586f3
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-6m-Neuroepithelial-Proteoglycan-expressing_cell\|6m / Sample Type, Dataset, Time_group, and Cell type.	COL6A1 COL21A1 KLF4 PCDH7 LRRC17 COL1A2	1.41e-06	200	78	6	0f7431f670f3a175377cefae3479403a881bb8fb
ToppCell	3'-GW_trimst-1-SmallIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_2_(ZEB2+)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL6A1 COL9A1 COL21A1 PKDCC LRRC17 COL1A2	1.41e-06	200	78	6	ac8a5d71acd4d401995babd233f0d3738e8ad2a5
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_2-Sox4\|Hippocampus / BrainAtlas - Mouse McCarroll V32	XRN2 SRSF2 GPC2 HNRNPH1 SYNCRIP	4.14e-06	136	78	5	0185486c39700dd2f72d79be6d283494dd8379c9
ToppCell	Hippocampus-Macroglia-POLYDENDROCYTE-P5-P5_2\|Hippocampus / BrainAtlas - Mouse McCarroll V32	XRN2 SRSF2 GPC2 HNRNPH1 SYNCRIP	4.14e-06	136	78	5	3e13dc0634f3b05e9f9e6c3193f843f62e603b78
ToppCell	renal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Collecting_tubule_epithelial_cell-kidney_connecting_tubule_epithelial_cell-Connecting_Tubule_Cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	SHROOM3 KLHDC7B SKOR1 GPC2 OPLAH	7.36e-06	153	78	5	79c4f4ccdc8249c8461075c73491bc3b2d13344a
ToppCell	saliva-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD8_c01-LEF1\|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)	GALNT17 TCF19 TBX21 KIAA1549 PDCD7	8.87e-06	159	78	5	2233fee5dcdb6c7dee5b1bd8efbc07d86b339927
ToppCell	normal_Lung-Fibroblasts-Myofibroblasts\|Fibroblasts / Location, Cell class and cell subclass	COL24A1 COL9A1 PCDH7 LRRC17 COL1A2	1.03e-05	164	78	5	9b4a6007abae992db871d9f6f731d5af724de30d
ToppCell	facs-Lung-3m-Mesenchymal-fibroblast-mesothelial_cell\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	COL24A1 SERTAD4 PKDCC PCDH7 SP7	1.13e-05	167	78	5	743df5908c1ceb43b34b240d9f9649f30f4142fa
ToppCell	facs-Lung-3m-Mesenchymal-fibroblast-mesothelial_cell-mesothelial_cell\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	COL24A1 SERTAD4 PKDCC PCDH7 SP7	1.13e-05	167	78	5	1adb566f98af0109c8cc6e36033b89651e2c75e7
ToppCell	10x_5'_v1-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia/MHC-Z\|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	COL6A1 ARC TNKS1BP1 WDR62 COL1A2	1.23e-05	170	78	5	dfef8f79960979335b86b4730f224239b40735d5
ToppCell	10x_5'_v1-Neoplastic-Differentiated-like-MES-like-MES-like_hypoxia/MHC\|10x_5'_v1 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	COL6A1 ARC TNKS1BP1 WDR62 COL1A2	1.23e-05	170	78	5	fb6098137d010175978596bc382e9ecba9c3891e
ToppCell	3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.1\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	USP2 COL24A1 SHROOM3 TRH ARHGAP39	1.26e-05	171	78	5	1854a777d9eb9d3fc3ed3632332a6f89ce8131da
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell_of_renal_cortex-lymphatic_endothelial_cell_of_renal_cortex\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	EFCC1 KLF4 HNRNPH2 SHISA8 KLF2	1.41e-05	175	78	5	9a96a946db731ba24c9be34bedebf1f4a1372b9e
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Endothelial-lymphatic_endothelial_cell\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	EFCC1 KLF4 HNRNPH2 SHISA8 KLF2	1.41e-05	175	78	5	54c1f080195ad8392a095e83b56a4b54073d4c0d
ToppCell	renal_cortex_nuclei-CKD+DKD_normotensive-Endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell_of_renal_cortex\|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group	EFCC1 KLF4 HNRNPH2 SHISA8 KLF2	1.41e-05	175	78	5	2b51406a2c2daa13ab4ed283ede038cd11d9e641
ToppCell	Primary_Motor_Cortex_(M1)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L1-3_VIP_ZNF322P1\|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	COL9A1 COL21A1 DACT2 KLHDC7B SHISA8	1.53e-05	178	78	5	2a36475c260088f69f3b8c282d910e5eaa5c5c2d
ToppCell	Pericytes-Donor_05\|World / lung cells shred on cell class, cell subclass, sample id	COL4A2 COL6A1 GAS1 LRRC17 COL1A2	1.53e-05	178	78	5	a2448d868da2abe48c394c51264aad03e866dfec
ToppCell	LPS-IL1RA-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL24A1 COL9A1 GALNT17 PCDH7 COL1A2	1.57e-05	179	78	5	02c90d8306016365ed811f0c63cfb3ac7b85464c
ToppCell	5'-Adult-SmallIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A2 COL6A1 COL24A1 PCDH7 COL1A2	1.62e-05	180	78	5	f2f6e83127a4a415e65c76a35efa8175fbd5b5d9
ToppCell	390C-Fibroblasts-Fibroblast-G\|390C / Donor, Lineage, Cell class and subclass (all cells)	COL6A1 COL21A1 SYDE1 LRRC17 COL1A2	1.62e-05	180	78	5	137fc14859c89e1ecd98bee388bb58c04b835847
ToppCell	facs-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l17\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	COL6A1 GALNT17 GAS1 SERTAD4 COL1A2	1.62e-05	180	78	5	39ae8586efd91536e9ac6408d26de7e6d6237c41
ToppCell	Control-Fibroblasts-Airway_smooth_muscle\|Control / group, cell type (main and fine annotations)	COL4A2 COL6A1 GALNT17 PCDH7 COL1A2	1.62e-05	180	78	5	d0de12749ef0f51f0931c6e7b9b99966bdbc3ec1
ToppCell	390C-Fibroblasts-Fibroblast-G-\|390C / Donor, Lineage, Cell class and subclass (all cells)	COL6A1 COL21A1 SYDE1 LRRC17 COL1A2	1.62e-05	180	78	5	cd6790de050151fedfa2c5ea6ad58b72665414b2
ToppCell	facs-Pancreas-Exocrine-18m-Mesenchymal\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A1 GAS1 PCDH7 LRRC17 COL1A2	1.66e-05	181	78	5	269b39ac65790061d54eab47a8eeb024403f0348
ToppCell	facs-Pancreas-Exocrine-18m-Mesenchymal-pancreatic_stellate_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A1 GAS1 PCDH7 LRRC17 COL1A2	1.66e-05	181	78	5	cd4f744b6b64ba6c22ec07afd1d3058a2546909d
ToppCell	facs-Pancreas-Exocrine-18m-Mesenchymal-pancreatic_stellate_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A1 GAS1 PCDH7 LRRC17 COL1A2	1.66e-05	181	78	5	c8395ae872aa80b3ae1ab7c53e57b3ca15aeb0e2
ToppCell	Control-Epithelial_alveolar-AT_1-AT1-AT2\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SHROOM3 NKX2-1 DACT2 IRX1 RBM47	1.70e-05	182	78	5	a95956ce4adccb34cc0c47ebfa1878ce4617904e
ToppCell	P15-Mesenchymal-mesenchymal_fibroblast-mesenchymal_alveolar_niche_cell\|P15 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	COL6A1 GALNT17 GAS1 LRRC17 COL1A2	1.70e-05	182	78	5	e9fcae9d03a6faf85b91882c5da699037bc61aeb
ToppCell	Control-Epithelial_alveolar-AT_2-AT2\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SHROOM3 NKX2-1 DACT2 IRX1 RBM47	1.70e-05	182	78	5	e97681a4102f3095d5d9e90ad70f1dc46e90983a
ToppCell	LPS_only-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL24A1 COL9A1 GALNT17 PCDH7 COL1A2	1.75e-05	183	78	5	12daaea821e49bc94a01e2496331e92a80d27339
ToppCell	5'-Adult-LargeIntestine-Mesenchymal-myocytic-myofibroblast\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL4A2 COL6A1 PCDH7 LRRC17 COL1A2	1.75e-05	183	78	5	af8d86f15a549064530d94bd47081daf59d58ecd
ToppCell	P07-Mesenchymal-mesenchymal_fibroblast-mesenchymal_alveolar_niche_cell\|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	COL6A1 GALNT17 GAS1 LRRC17 COL1A2	1.80e-05	184	78	5	01257e5c12e38b849fd3d9496c43ded666249ba5
ToppCell	Control-Epithelial_alveolar-AT_2\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SHROOM3 NKX2-1 DACT2 IRX1 RBM47	1.80e-05	184	78	5	51e129b3fcc2df083eda05a3afe3717218b1e52b
ToppCell	droplet-Lung-nan-3m-Mesenchymal-fibroblast_of_lung\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A1 SHROOM3 GAS1 EFCC1 COL1A2	1.80e-05	184	78	5	89ac32e374a4379e4a6c6ea7603b1378b77c147f
ToppCell	droplet-Marrow-nan-3m\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	PPP1R10 XRN2 HNRNPUL1 KLF4 KLF2	1.80e-05	184	78	5	1154a5ad7b8512272b7476f949ddac350910bfb7
ToppCell	droplet-Lung-nan-3m-Mesenchymal-Alveolar_Fibroblast\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL6A1 SHROOM3 GAS1 EFCC1 COL1A2	1.80e-05	184	78	5	4df6027fa635996c1eddb920f88a5265772df1cd
ToppCell	LPS-antiTNF-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL24A1 COL9A1 GALNT17 PCDH7 COL1A2	1.84e-05	185	78	5	6712512100ccef456d2e2bd201d0987986c92ac9
ToppCell	droplet-Lung-21m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l17\|21m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	COL6A1 GAS1 SERTAD4 KCNN1 COL1A2	1.84e-05	185	78	5	1b990e3089772be2b38c6d7ea0d1bf22461ae3ea
ToppCell	Control-Epithelial_alveolar-AT_2-AT2_Progenitor\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	SHROOM3 NKX2-1 DACT2 IRX1 RBM47	1.84e-05	185	78	5	8ca1374501eca01d8468130b74d50abfd4329fbe
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro2_(5)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	MSR1 GALNT17 COL21A1 SERTAD4 COL1A2	1.84e-05	185	78	5	9f19f04fc4d97dfc2dd78cde77b515f1cb5d51ec
Computational	RNA splicing.	SRSF2 HNRNPUL1 SRSF9 HNRNPH1	1.64e-04	65	46	4	MODULE_183
Drug	GK-101	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.35e-07	36	77	5	CID000161853
Drug	Madecassol	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	4.77e-07	46	77	5	CID000108062
Drug	d-indobufen	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	7.30e-07	50	77	5	CID000044562
Drug	ridogrel	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	8.90e-07	52	77	5	CID005362391
Drug	NSC49633	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	9.80e-07	53	77	5	CID000023340
Drug	AC1LAKND	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	2.16e-06	62	77	5	CID000470146
Drug	poly(G	PPP1R10 XRN2 SRSF2 CPSF6 HNRNPUL1 HNRNPH1	2.45e-06	114	77	6	CID000439502
Drug	BAPN	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	4.24e-06	71	77	5	CID000001647
Drug	malotilate	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	4.24e-06	71	77	5	CID000004006
Drug	AC1NMZ1B	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	5.56e-06	75	77	5	CID005034185
Drug	strontium ranelate	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	6.34e-06	77	77	5	CID006918182
Drug	halofuginone lactate	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.03e-05	85	77	5	CID000062891
Drug	4-hydroxyproline	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.44e-05	91	77	5	CID000000825
Drug	L-lysyl-L-lysyl-L-lysine	COL6A1 COL24A1 COL9A1 COL21A1 GPC2 COL1A2	1.85e-05	162	77	6	CID000072363
Drug	S-2-pentyl-4-pentynoic hydroxamic acid	USP2 SHROOM3 TRAFD1 SRSF2 TCF19 TRH KCNN1 ARC ARID1A QSOX2 WDR62 SYNCRIP	2.22e-05	834	77	12	ctd:C513635
Drug	ticlopidine	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	2.62e-05	103	77	5	CID000005472
Drug	AC1NRA5C	SRSF2 DDX42 SRSF9 HNRNPH1 HNRNPH2 SYNCRIP	2.77e-05	174	77	6	CID005287709
Drug	hyaluronan	COL6A1 COL24A1 HABP4 COL9A1 COL21A1 GPC2 COL1A2	3.06e-05	263	77	7	CID000024759
Drug	hydroxylysine	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	3.44e-05	109	77	5	CID000001029
Drug	AC1L1C2F	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	3.60e-05	110	77	5	CID000001711
Drug	PPACK	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	4.09e-05	113	77	5	CID003036757
Drug	AC1L9732	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	4.27e-05	114	77	5	CID000439300
Drug	Mepenzolate bromide [76-90-4]; Up 200; 9.6uM; PC3; HT_HG-U133A	COL6A1 ZSWIM8 PGP SH3D21 SYDE1 LRRC17	4.39e-05	189	77	6	4304_UP
Drug	Tranilast sodium	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	4.45e-05	115	77	5	CID000005527
Drug	SC-560; Down 200; 10uM; MCF7; HT_HG-U133A	KCNN1 ARC PGP HNRNPH1 LRRC17 KLF2	5.23e-05	195	77	6	6870_DN
Drug	Ethacrynic acid [58-54-8]; Up 200; 13.2uM; MCF7; HT_HG-U133A	COL21A1 NTN3 TLX3 ADAM30 POU3F2 COL1A2	5.23e-05	195	77	6	3181_UP
Drug	Ofloxacin [82419-36-1]; Down 200; 11uM; PC3; HT_HG-U133A	COL4A2 COL6A1 ATXN2 ARC KLF4 SYDE1	5.38e-05	196	77	6	3673_DN
Drug	Althiazide [5588-16-9]; Up 200; 10.4uM; MCF7; HT_HG-U133A	MSR1 COL6A1 TLX3 PCDH7 SH3D21 TMEM40	5.53e-05	197	77	6	6089_UP
Drug	Alfaxalone [23930-19-0]; Up 200; 12uM; MCF7; HT_HG-U133A	MSR1 USP2 COL6A1 ARC GNAS WDR62	5.53e-05	197	77	6	6514_UP
Drug	Phthalylsulfathiazole [85-73-4]; Up 200; 10uM; HL60; HT_HG-U133A	MSR1 USP2 COL6A1 NTN3 TBX21 COL1A2	5.69e-05	198	77	6	3033_UP
Drug	Selara	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	6.63e-05	125	77	5	CID000150310
Drug	2-imidazolidone-4-carboxylic acid	TRH OPLAH	6.74e-05	4	77	2	CID000089477
Drug	2-(ethylsulfonyl)ethanol	SRSF2 DAZAP1 DDX42 UPF1 SRSF9 HNRNPH1	7.88e-05	210	77	6	CID000010549
Drug	DMSe	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	8.58e-05	132	77	5	CID000020796
Drug	pirfenidone	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.06e-04	138	77	5	CID000040632
Drug	DL-penicillamine	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.10e-04	139	77	5	CID000004727
Drug	PCR 4099	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.10e-04	139	77	5	CID000002806
Drug	AC1Q6PCP	COL6A1 COL24A1 COL9A1 COL21A1 GNAS COL1A2	1.30e-04	230	77	6	CID000005267
Drug	candesartan cilexetil	COL6A1 COL24A1 COL9A1 COL21A1 COL1A2	1.34e-04	145	77	5	CID000002540
Drug	ethyl protocatechuate	SP7 KLF2	1.68e-04	6	77	2	ctd:C018063
Drug	AC1L1AUZ	SRSF2 UPF1 HNRNPH1 HNRNPH2 SYNCRIP	1.94e-04	157	77	5	CID000001160
Drug	prostacyclin sodium salt	COL6A1 COL24A1 COL9A1 COL21A1 SP7 COL1A2	2.04e-04	250	77	6	CID000000159
Disease	cortical surface area measurement	COL24A1 SHROOM3 ATXN2 CPSF6 GAS1 TLX3 PKDCC ARHGAP39 HNRNPA1L3 PCDH7 HNRNPH1 SP7	1.40e-04	1345	75	12	EFO_0010736
Disease	creatinine measurement	COL4A2 SHROOM3 TRH GNAS ARID1A KLF4 RBM47 QSOX2 OPLAH SHISA8	2.07e-04	995	75	10	EFO_0004518
Disease	Neuroblastoma	GNAS ARID1A PINK1	2.36e-04	47	75	3	C0027819
Disease	Osteogenesis imperfecta type IV (disorder)	SP7 COL1A2	2.83e-04	10	75	2	C0268363
Disease	biological sex	XRN2 GALNT17 ATXN2 ARHGAP39 PCDH7	3.05e-04	230	75	5	PATO_0000047
Disease	complement C1q tumor necrosis factor-related protein 5 measurement	MSR1 USP2	3.45e-04	11	75	2	EFO_0801494
Disease	comparative body size at age 10, self-reported	COL21A1 TLX3 ZSWIM6 GNAS HNRNPA1L3 PCDH7	7.06e-04	420	75	6	EFO_0009819
Disease	uric acid measurement	USP2 SHROOM3 TRAFD1 DAZAP1 GNAS ARID1A QSOX2	9.18e-04	610	75	7	EFO_0004761
Disease	Tachyarrhythmia	TRH GNAS	9.50e-04	18	75	2	C0080203
Disease	Tachycardia	TRH GNAS	9.50e-04	18	75	2	C0039231
Disease	total blood protein measurement	COL4A2 ZSWIM8 ATXN2 PKDCC RBM47 KLF2	9.97e-04	449	75	6	EFO_0004536
Disease	white matter hyperintensity measurement	COL4A2 ZSWIM6 ARID1A HNRNPA1L3 PCDH7	1.04e-03	302	75	5	EFO_0005665
Disease	Lung diseases	NKX2-1 IRX1 KLF2	1.05e-03	78	75	3	C0024115
Disease	Osteogenesis imperfecta	SP7 COL1A2	1.30e-03	21	75	2	cv:C0029434
Disease	thyroid stimulating hormone measurement	ATXN2 DACT2 POU3F2 GNAS RBM47	1.41e-03	323	75	5	EFO_0004748
Disease	Parkinson disease	ATXN2 PINK1	1.42e-03	22	75	2	cv:C0030567
Disease	serum urea measurement	COL4A2 SHROOM3 GNAS RBM47	1.56e-03	195	75	4	EFO_0009795
Disease	Intrahepatic Cholangiocarcinoma	GNAS ARID1A	1.70e-03	24	75	2	C0345905
Disease	Extrahepatic Cholangiocarcinoma	GNAS ARID1A	1.70e-03	24	75	2	C3805278
Disease	Cholangiocarcinoma	GNAS ARID1A	1.99e-03	26	75	2	C0206698
Disease	cortical thickness	COL4A2 SHROOM3 ATXN2 COL21A1 CPSF6 TLX3 PKDCC HNRNPA1L3 PCDH7	2.02e-03	1113	75	9	EFO_0004840
Disease	retinal vasculature measurement	COL4A2 USP2 XRN2 ATXN2 SERTAD4 HNRNPA1L3	2.04e-03	517	75	6	EFO_0010554
Disease	eye measurement	SRSF2 ATXN2	2.15e-03	27	75	2	EFO_0004731

Protein segments in the cluster

Peptide	Gene	Start	Entry
RTSGGLHAYPGPRGG	ARC	6	Q7LC44
GGPRGRPGYDGCNGT	COL4A2	126	P08572
PGQKGSRGLDGYQGP	COL4A2	316	P08572
SRGLDGYQGPDGPRG	COL4A2	321	P08572
QAIGGYGPPPAGRGA	DAZAP1	241	Q96EP5
GYFGTRAGPRLPRGA	EFCC1	151	Q9HA90
GQRGAGPGNSAYTPR	ARIH2OS	211	Q8N7S6
GPGNSAYTPRRSQGG	ARIH2OS	216	Q8N7S6
GGGLGAPLAAYRQGQ	NKX2-1	31	P43699
SGPHGGGGQYFAKPR	HNRNPA1L3	241	A0A2R8Y4L2
AGNRAPGPRGSYLGG	RBM47	386	A0AV96
PGPRGSYLGGYSAGR	RBM47	391	A0AV96
GPGAGGAARLYRAGE	QSOX2	46	Q6ZRP7
AGGGYQAGSPQRSPG	ARHGAP39	336	Q9C0H5
GNLPHRGLQGPGLGY	KIAA1549	1896	Q9HCM3
GPNGGMGDPYSRAAG	ARID1A	1251	O14497
GTGGGLLYGRESAPP	KLF4	166	O43474
TNGLHARGYGPLGGR	HAPLN2	86	Q9GZV7
GGRGRPGIRSYGPRD	HAPLN2	216	Q9GZV7
GAAAYGARSPGGSPG	HECA	256	Q9UBI9
TGAGRGRYLPPVVGG	GPC2	431	Q8N158
GGGRRGSNPVKRYAP	LRRC17	36	Q8N6Y2
FRGGRGGAHRGGFPP	METTL14	441	Q9HCE5
RRSGRGGGGAAPGPY	ATXN2	36	Q99700
YNGSVGRPLGSGPGA	KCNN1	6	Q92952
LNIGGGGLGYRERPG	DDX42	651	Q86XP3
GGLGYRERPGLGSEN	DDX42	656	Q86XP3
FGNLPRPGRGARGGT	HABP4	361	Q5JVS0
GRGAAPPRGRAGYSQ	SYNCRIP	511	O60506
PPRGRAGYSQRGGPG	SYNCRIP	516	O60506
AGYSQRGGPGSARGV	SYNCRIP	521	O60506
DRPGAGRGYNSIGRG	HNRNPH2	211	P55795
SRGGGGAGAFYPVPP	PDCD7	71	Q8N8D1
FTGKPGRAYGLGRPG	PINK1	21	Q9BXM7
GRAYGLGRPGPAAGC	PINK1	26	Q9BXM7
RRAGAADSAPYPGGG	PCDH7	196	O60245
LRRLGFGGPAGPGAS	PGP	81	A6NDG6
AASGGRGDLPYGPGR	GAS1	301	P54826
RGDLPYGPGRRSSGG	GAS1	306	P54826
YAVSKGPCRPGGGRG	KRT82	31	Q9NSB4
DRPGAGRGYNSIGRG	HNRNPH1	211	P31943
IGFPGSRGLPGYAGR	MSR1	311	P21757
SRGLPGYAGRPGNSG	MSR1	316	P21757
RAPYRSGAGGPLGGR	PTOV1	6	Q86YD1
PGRRYLLLGGGPGAA	NTN3	521	O00634
PGYFGQANGPAAGRG	UPF1	1006	Q92900
YGGSIDSGPPGLLRG	ADAM30	666	Q9UKF2
GERGYPGNIGPVGAA	COL1A2	946	P08123
RGAGRGGPQQQGYMP	DACT2	396	Q5SW24
AFPQGGRGRGRFPGA	CPSF6	196	Q16630
GYPGNRGAPGINGTK	COL6A1	526	P12109
RGAPGINGTKGYPGL	COL6A1	531	P12109
GSPGIQGARGLPGYK	COL21A1	491	Q96P44
QGARGLPGYKGEPGR	COL21A1	496	Q96P44
YGGRGKGGLPATLSP	GALNT17	91	Q6IS24
LYQGGRSGLPRGPRG	KLHDC7B	291	Q96G42
GDPGPASYGRNGRDG	COL9A1	861	P20849
YKGPARDPGGGAGAI	FAM83H	741	Q6ZRV2
GGGGGFQRYENRGPP	HNRNPUL1	621	Q9BUJ2
AAGPGGTRSPRAGYL	SYDE1	216	Q6ZW31
GGPGGGAGVRSYPVI	SKOR1	361	P84550
SAREAYGAGPARGPG	SKOR1	611	P84550
ARGPGPGAGSGGYVS	SKOR1	621	P84550
SRRGPPPRRYGGGGY	SRSF2	101	Q01130
FPRTYGGRGGWPRGG	SRSF9	86	Q13242
EVQRYSRGGPGPGAG	PKDCC	66	Q504Y2
PNGGFQSGGSYHPGR	SH3D21	191	A4FU49
PGPSGRYGASGRSEG	TRAFD1	531	O14545
GPGAYGGERPGVLAA	IRX1	16	P78414
FRPYGLHGGEPGARG	OPLAH	1201	O14841
PGAFSGARPGLGGYS	GNAS	141	Q5JWF2
GRGTQEGYPGGRPTC	SHROOM3	681	Q8TF72
PQLPGLYGSAGRGSR	SHISA8	371	B8ZZ34
RGAGPPLAGSHYRGI	SERTAD4	51	Q9NUC0
AEPPGGMQQGAGGYR	POU3F2	21	P20265
GNIGSPGYPGRQGLA	COL24A1	591	Q17RW2
GGGRGGDLYTFHPPA	TCF19	11	Q9Y242
GVVGAGGPGPRYELR	XKR7	41	Q5GH72
YQGRSPNAYGGGRGL	RBMXL3	916	Q8N7X1
AKPPRGASTGGSGGY	SP7	246	Q8TDD2
YGLGGASPRGDPGLG	TNKS1BP1	756	Q9C0C2
GGYPPRRDDRGGRQG	XRN2	916	Q9H0D6
RRSLGAGYPHGNGSP	TMEM40	86	Q8WWA1
ASYLGGPPGGRPGAT	TLX3	41	O43711
RGGSQPRAGTGYASP	WDR62	1131	O43379
GGYNGRGWGSPGRPK	ZSWIM8	1121	A7E2V4
GGYSSACRPGPRAGG	ZSWIM6	36	Q9HCJ5
RALGGPCGPQGAYGQ	TRH	191	P20396
RGGPGSGGHGPLRYR	ZNF687	1101	Q8N1G0
RPLGSGLSGGSGFPY	USP2	101	O75604
GPYHRGRGGRGGNEP	PPP1R10	701	Q96QC0
DERRGGGSLGSPYPG	TBX21	46	Q9UL17
GGGYGCAPGLTRGPR	KLF2	131	Q9Y5W3