Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyBiologicalProcessneuronal action potential

NPR2 P2RX1 MTOR SCN8A CACNA1H

3.54e-0663765GO:0019228
GeneOntologyBiologicalProcesspositive regulation of translation

NIBAN1 AGO2 KHDRBS1 MTOR EIF4G2 LIN28A

2.00e-05151766GO:0045727
GeneOntologyBiologicalProcesstransmission of nerve impulse

NPR2 P2RX1 MTOR SCN8A CACNA1H

5.87e-05112765GO:0019226
GeneOntologyCellularComponentINO80-type complex

ACTR8 SRCAP TRRAP

1.42e-0428763GO:0097346
GeneOntologyCellularComponentpresynaptic active zone membrane

STX2 P2RX1 SCN8A CACNA1H

1.88e-0478764GO:0048787
DomainARM-type_fold

AP4E1 NF1 DOCK8 MTOR DOCK9 EIF4G2 UTP20 COPG2 XPO1 TRRAP XPOT

1.20e-073397611IPR016024
DomainARM-like

AP4E1 NF1 DOCK8 MTOR DOCK10 UTP20 COPG2 XPO1 TRRAP XPOT

1.39e-072707610IPR011989
DomainDUF3398

DOCK8 DOCK9 DOCK10

1.28e-066763PF11878
DomainDOCK_C/D_N

DOCK8 DOCK9 DOCK10

1.28e-066763IPR021816
Domain-

AP4E1 NF1 MTOR UTP20 COPG2 XPO1 TRRAP XPOT

3.31e-062227681.25.10.10
DomainDOCK_C

DOCK8 DOCK9 DOCK10

1.04e-0511763IPR010703
DomainDHR-1_domain

DOCK8 DOCK9 DOCK10

1.04e-0511763IPR027007
DomainDHR_2

DOCK8 DOCK9 DOCK10

1.04e-0511763PS51651
DomainDHR_1

DOCK8 DOCK9 DOCK10

1.04e-0511763PS51650
DomainDOCK-C2

DOCK8 DOCK9 DOCK10

1.04e-0511763PF14429
DomainDHR-2

DOCK8 DOCK9 DOCK10

1.04e-0511763IPR027357
DomainDHR-2

DOCK8 DOCK9 DOCK10

1.04e-0511763PF06920
DomainDOCK

DOCK8 DOCK9 DOCK10

1.04e-0511763IPR026791
DomainFIIND_dom

NLRP1 CARD8

1.63e-052762IPR025307
DomainFIIND

NLRP1 CARD8

1.63e-052762PF13553
DomainHEAT_REPEAT

MTOR UTP20 COPG2 XPO1

1.89e-0470764PS50077
DomainFAT

MTOR TRRAP

2.43e-046762PS51189
DomainFATC

MTOR TRRAP

2.43e-046762PS51190
DomainXpo1

XPO1 XPOT

2.43e-046762PF08389
DomainFAT

MTOR TRRAP

2.43e-046762PF02259
DomainPIK-rel_kinase_FAT

MTOR TRRAP

2.43e-046762IPR003151
DomainFATC_dom

MTOR TRRAP

2.43e-046762IPR003152
DomainPIK_FAT

MTOR TRRAP

2.43e-046762IPR014009
DomainExportin-1/Importin-b-like

XPO1 XPOT

2.43e-046762IPR013598
DomainFATC

MTOR TRRAP

2.43e-046762SM01343
DomainCoatomer/calthrin_app_sub_C

AP4E1 COPG2

4.50e-048762IPR009028
DomainClathrin/coatomer_adapt-like_N

AP4E1 COPG2

1.66e-0315762IPR002553
DomainAdaptin_N

AP4E1 COPG2

1.66e-0315762PF01602
DomainIBN_N

XPO1 XPOT

1.66e-0315762PF03810
DomainHEAT

MTOR UTP20 XPO1

1.70e-0358763IPR000357
Domain-

MTOR TRRAP

1.89e-03167621.10.1070.11
DomainIBN_N

XPO1 XPOT

1.89e-0316762SM00913
DomainPI3Kc

MTOR TRRAP

1.89e-0316762SM00146
DomainImportin-beta_N

XPO1 XPOT

2.14e-0317762IPR001494
DomainRUN

RUFY1 RUFY3

2.40e-0318762SM00593
DomainPI3/4_kinase_cat_dom

MTOR TRRAP

2.40e-0318762IPR000403
DomainPI3_PI4_kinase

MTOR TRRAP

2.40e-0318762PF00454
DomainPI3_4_KINASE_3

MTOR TRRAP

2.40e-0318762PS50290
DomainPI3_4_KINASE_1

MTOR TRRAP

2.40e-0318762PS00915
DomainPI3_4_KINASE_2

MTOR TRRAP

2.40e-0318762PS00916
DomainRUN

RUFY1 RUFY3

2.67e-0319762PS50826
DomainRUN

RUFY1 RUFY3

2.67e-0319762PF02759
DomainRun_dom

RUFY1 RUFY3

2.67e-0319762IPR004012
DomainUSP_1

USP53 USP7 USP4

2.91e-0370763PS00972
DomainUCH

USP53 USP7 USP4

3.03e-0371763PF00443
DomainUSP_2

USP53 USP7 USP4

3.03e-0371763PS00973
DomainUSP_3

USP53 USP7 USP4

3.16e-0372763PS50235
DomainUSP_dom

USP53 USP7 USP4

3.16e-0372763IPR028889
DomainPeptidase_C19_UCH

USP53 USP7 USP4

3.16e-0372763IPR001394
DomainTRAF-like

TRAF7 USP7

4.26e-0324762IPR008974
DomainCARD

NLRP1 CARD8

5.77e-0328762PF00619
DomainCARD

NLRP1 CARD8

7.04e-0331762IPR001315
DomainCARD

NLRP1 CARD8

7.95e-0333762PS50209
Pubmed

Defining the membrane proteome of NK cells.

TUBGCP6 NIBAN1 AGO2 NF1 KHDRBS1 DOCK8 MTOR GCC2 DOCK9 DHX38 DDX42 EIF4G2 DOCK10 FADS2 APLP2 ABCD1 XPO1 BIRC6 PRPF40A

6.89e-121168771919946888
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

NF1 SBF1 MTOR DHX38 DDX42 USP7 UTP20 COPG2 XPO1 TRRAP BIRC6 PRPF40A XPOT

1.96e-09653771322586326
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

TUBGCP6 NF1 RPS6KA5 ZNF592 EIF4G2 USP7 UNK UTP20 XPO1 PAK1IP1 TRRAP PRPF40A

1.33e-07774771215302935
Pubmed

5-HT(6) receptor recruitment of mTOR as a mechanism for perturbed cognition in schizophrenia.

NF1 MTOR COPG2 XPOT

3.75e-072777423027611
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

NF1 KHDRBS1 MTOR DHX38 DDX42 EIF4G2 USP7 UTP20 FASTKD5 APLP2 IDE XPO1 PAK1IP1 PRPF40A XPOT

4.62e-071425771530948266
Pubmed

Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.

TRAF7 GTF2F2 MTOR GCC2 USP7 FADS2 UNK UTP20 FASTKD5 COPG2 IDE

8.42e-07754771133060197
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

MACC1 GTF2F2 SBF1 ZNF592 RBM33 DHX38 EIF4G2 USP7 LAMB2 UNK UTP20 COPG2 APLP2 PAK1IP1 TRRAP

8.59e-071497771531527615
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

TRAF7 SBF1 ZNF592 MTOR DOCK9 SCN8A USP7 LAMB2 CACNA1H ABCD1 SRCAP TRRAP BIRC6

8.75e-071105771335748872
Pubmed

FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.

GTF2F2 ZNF592 RBM33 DOCK9 USP7 XPO1 TRRAP RUFY1 XPOT

1.58e-0649777936774506
Pubmed

Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.

GTF2F2 ACTR8 KHDRBS1 DDX42 CCDC87 XPO1 SRCAP TRRAP

2.49e-0639077817643375
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

TUBGCP6 USP53 AGO2 SBF1 ZNF592 KLHL42 UNK KCNT1 RUFY3

2.62e-0652977914621295
Pubmed

Identification of an evolutionarily conserved superfamily of DOCK180-related proteins with guanine nucleotide exchange activity.

DOCK8 DOCK9 DOCK10

3.73e-061477312432077
Pubmed

R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.

TUBGCP6 ACTR8 SBF1 DHX38 SRCAP TRRAP XPOT

4.75e-0630077728561026
Pubmed

CARD8 and NLRP1 undergo autoproteolytic processing through a ZU5-like domain.

NLRP1 CARD8

4.84e-06277222087307
Pubmed

Direct participation of Sam68, the 68-kilodalton Src-associated protein in mitosis, in the CRM1-mediated Rev nuclear export pathway.

KHDRBS1 XPO1

4.84e-06277212134041
Pubmed

Novel carfilzomib-based combinations as potential therapeutic strategies for liposarcomas.

FADS2 XPO1

4.84e-06277232851475
Pubmed

Tripping the wire: sensing of viral protease activity by CARD8 and NLRP1 inflammasomes.

NLRP1 CARD8

4.84e-06277237311351
Pubmed

1,25-Dihydroxyvitamin D3 suppresses exportin expression in human promyelocytic leukemia HL-60 cells.

XPO1 XPOT

4.84e-06277216707848
Pubmed

The NLRP1 and CARD8 inflammasomes detect reductive stress.

NLRP1 CARD8

4.84e-06277236649710
Pubmed

Protein folding stress potentiates NLRP1 and CARD8 inflammasome activation.

NLRP1 CARD8

4.84e-06277236649711
Pubmed

Coupling of Slack and NaV1.6 sensitizes Slack to quinidine blockade and guides anti-seizure strategy development.

SCN8A KCNT1

4.84e-06277238289338
Pubmed

Anti-tumor activity of selective inhibitor of nuclear export (SINE) compounds, is enhanced in non-Hodgkin lymphoma through combination with mTOR inhibitor and dexamethasone.

MTOR XPO1

4.84e-06277227693556
Pubmed

Hyperactivation of mTOR critically regulates abnormal osteoclastogenesis in neurofibromatosis Type 1.

NF1 MTOR

4.84e-06277221748792
Pubmed

Structural basis for distinct inflammasome complex assembly by human NLRP1 and CARD8.

NLRP1 CARD8

4.84e-06277233420028
Pubmed

Mechanism of filament formation in UPA-promoted CARD8 and NLRP1 inflammasomes.

NLRP1 CARD8

4.84e-06277233420033
Pubmed

Sam68 functions in nuclear export and translation of HIV-1 RNA.

KHDRBS1 XPO1

4.84e-06277219535902
Pubmed

Genetic variation in inflammasome genes is associated with outcome in bacterial meningitis.

NLRP1 CARD8

4.84e-06277223053059
Pubmed

De novo SCN8A and inherited rare CACNA1H variants associated with severe developmental and epileptic encephalopathy.

SCN8A CACNA1H

4.84e-06277234399820
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

AGO2 NF1 SBF1 DHX38 EIF4G2 USP7 DOCK10 UTP20 XPO1 SRCAP TRRAP BIRC6 XPOT

7.99e-061353771329467282
Pubmed

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.

DDX42 USP7 XPO1 TRRAP PRPF40A XPOT

9.76e-0622077635785414
Pubmed

KSHV episome tethering sites on host chromosomes and regulation of latency-lytic switch by CHD4.

GTF2F2 KHDRBS1 RBM33 DDX42 PRPF40A

1.08e-0513077535545047
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

AGO2 KHDRBS1 RBM33 DHX38 DDX42 EIF4G2 UNK UTP20 FASTKD5 PRPF40A

1.16e-05807771022681889
Pubmed

LCP1 preferentially binds clasped αMβ2 integrin and attenuates leukocyte adhesion under flow.

DHX38 EIF4G2 USP7 USP4 XPO1 TRRAP BIRC6

1.16e-0534477730333137
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

GTF2F2 KHDRBS1 ZNF592 DHX38 DDX42 EIF4G2 USP7 XPO1 PAK1IP1 TRRAP PRPF40A

1.41e-051014771132416067
Pubmed

circFADS2 protects LPS-treated chondrocytes from apoptosis acting as an interceptor of miR-498/mTOR cross-talking.

MTOR FADS2

1.45e-05377231141496
Pubmed

Roles of the DOCK-D family proteins in a mouse model of neuroinflammation.

DOCK9 DOCK10

1.45e-05377232241915
Pubmed

Genetic variation in the inflammasome and atopic dermatitis susceptibility.

NLRP1 CARD8

1.45e-05377223563199
Pubmed

Regulation of Chk1 includes chromatin association and 14-3-3 binding following phosphorylation on Ser-345.

HUS1 XPO1

1.45e-05377212676962
Pubmed

SARS-CoV-2 Nsp6 damages Drosophila heart and mouse cardiomyocytes through MGA/MAX complex-mediated increased glycolysis.

NF1 MTOR GCC2 FASTKD5 COPG2 APLP2 XPO1 BIRC6 XPOT

1.49e-0565777936180527
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

AGO2 SBF1 DHX38 USP7 COPG2 APLP2 IDE XPO1 BIRC6 PLK4 XPOT

1.93e-051049771127880917
Pubmed

Discovery and Characterization of ZUFSP/ZUP1, a Distinct Deubiquitinase Class Important for Genome Stability.

USP53 NF1 MTOR USP7 USP4

1.95e-0514777529576527
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

GTF2F2 ACTR8 KHDRBS1 ZNF592 RBM33 DHX38 TRRAP PRPF40A

2.40e-0553377830554943
Pubmed

Endogenous Cell Type-Specific Disrupted in Schizophrenia 1 Interactomes Reveal Protein Networks Associated With Neurodevelopmental Disorders.

KHDRBS1 DHX38 DDX42 USP7 APLP2

2.59e-0515677529961565
Pubmed

SAM68 interaction with U1A modulates U1 snRNP recruitment and regulates mTor pre-mRNA splicing.

KHDRBS1 MTOR

2.89e-05477230767021
Pubmed

MAF mediates crosstalk between Ras-MAPK and mTOR signaling in NF1.

NF1 MTOR

2.89e-05477224509877
Pubmed

Lin28a protects against cardiac ischaemia/reperfusion injury in diabetic mice through the insulin-PI3K-mTOR pathway.

MTOR LIN28A

2.89e-05477225688987
Pubmed

p53 and NF 1 loss plays distinct but complementary roles in glioma initiation and progression.

NF1 MTOR

2.89e-05477229392777
Pubmed

The Tpr protein regulates export of mRNAs with retained introns that traffic through the Nxf1 pathway.

KHDRBS1 XPO1

2.89e-05477221613532
Pubmed

The circular RNA circBIRC6 participates in the molecular circuitry controlling human pluripotency.

AGO2 BIRC6

2.89e-05477229074849
Pubmed

Differential Dynamics of ATR-Mediated Checkpoint Regulators.

ATRIP HUS1

2.89e-05477220847938
Pubmed

CRM1 mediates nuclear-cytoplasmic shuttling of mature microRNAs.

AGO2 XPO1

2.89e-05477219955415
Pubmed

Whole Genome DNA Methylation Analysis of Obstructive Sleep Apnea: IL1R2, NPR2, AR, SP140 Methylation and Clinical Phenotype.

NPR2 IL1R2

2.89e-05477226888452
Pubmed

Insights into the ubiquitin-proteasome system of human embryonic stem cells.

KHDRBS1 DDX42 XPO1 BIRC6 PRPF40A LIN28A

3.03e-0526977629511261
Pubmed

Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism.

AGO2 NF1 KHDRBS1 DHX38 USP7 FASTKD5 APLP2 XPO1 TRRAP RUFY1 BIRC6 LIN28A

3.36e-051327771232694731
Pubmed

The cell proliferation antigen Ki-67 organises heterochromatin.

NF1 ATRIP CCDC87 DOCK10 UTP20 PAK1IP1 TRRAP

3.56e-0541077726949251
Pubmed

Virus-Host Interactome and Proteomic Survey Reveal Potential Virulence Factors Influencing SARS-CoV-2 Pathogenesis.

GTF2F2 UTP20 XPO1 RUFY1 RUFY3 XPOT

4.18e-0528577632838362
Pubmed

Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.

TRAF7 RBM33 DHX38 USP7 UNK SRCAP RUFY1 RUFY3

4.81e-0558877838580884
Pubmed

Phosphorylation of 4E-BP1 is mediated by the p38/MSK1 pathway in response to UVB irradiation.

RPS6KA5 MTOR

4.82e-05577211777913
Pubmed

Phosphorylation of the novel mTOR substrate Unkempt regulates cellular morphogenesis.

MTOR UNK

4.82e-05577236509146
Pubmed

The deubiquitinase USP10 regulates KLF4 stability and suppresses lung tumorigenesis.

USP7 USP4

4.82e-05577231748695
Pubmed

Monoubiquitylation promotes mitochondrial p53 translocation.

USP7 XPO1

4.82e-05577217268548
Pubmed

Zizimin2: a novel, DOCK180-related Cdc42 guanine nucleotide exchange factor expressed predominantly in lymphocytes.

DOCK9 DOCK10

4.82e-05577215710388
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

NF1 SBF1 ZNF592 DHX38 PAK1IP1 SRCAP TRRAP

5.55e-0544077734244565
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

KHDRBS1 ZNF592 DHX38 DDX42 USP7 FADS2 UTP20 XPO1 PAK1IP1 PRPF40A

6.46e-05989771036424410
Pubmed

Are voltage-dependent ion channels involved in the endothelial cell control of vasomotor tone?

SCN8A CACNA1H

7.22e-05677217513486
Pubmed

CARD6 is a modulator of NF-kappa B activation by Nod1- and Cardiak-mediated pathways.

NLRP1 CARD8

7.22e-05677212775719
Pubmed

The RhoGEF DOCK10 is essential for dendritic spine morphogenesis.

DOCK9 DOCK10

7.22e-05677225851601
Pubmed

Polymorphisms in inflammasome' genes and susceptibility to HIV-1 infection.

NLRP1 CARD8

7.22e-05677222227487
Pubmed

Similar subunit interactions contribute to assembly of clathrin adaptor complexes and COPI complex: analysis using yeast three-hybrid system.

AP4E1 COPG2

7.22e-05677211409905
Pubmed

Cessation of HIV-1 transcription by inhibiting regulatory protein Rev-mediated RNA transport.

KHDRBS1 XPO1

7.22e-05677219149559
Pubmed

eIF4GI links nutrient sensing by mTOR to cell proliferation and inhibition of autophagy.

MTOR EIF4G2

7.22e-05677218426977
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

KHDRBS1 RBM33 MTOR EIF4G2 USP7 COPG2 XPO1 XPOT

8.49e-0563877833239621
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

NIBAN1 NF1 KHDRBS1 DDX42 LAMB2 UTP20 XPO1 SRCAP TRRAP PRPF40A

8.62e-051024771024711643
Pubmed

CTDP1 regulates breast cancer survival and DNA repair through BRCT-specific interactions with FANCI.

NF1 COPG2 TRRAP XPOT

8.63e-0510477431240132
Pubmed

Mouse screen reveals multiple new genes underlying mouse and human hearing loss.

AP4E1 NF1 IL1R2 MTOR DDX42 UNK USP4 ABCD1 IDE TRRAP MGAT4C

8.89e-051242771130973865
Pubmed

Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.

TUBGCP6 AGO2 NF1 RPS6KA5 SCN8A UNK KCNT1

8.95e-0547577731040226
Pubmed

Novel Cul3 binding proteins function to remodel E3 ligase complexes.

KLHL42 NLRP1 PAK1IP1

9.72e-054077325011449
Pubmed

Exome sequencing supports a de novo mutational paradigm for schizophrenia.

MTOR FASTKD5 TRRAP

9.72e-054077321822266
Pubmed

The rapid activation of protein synthesis by growth hormone requires signaling through mTOR.

CSHL1 MTOR

1.01e-04777217284572
Pubmed

SPAG5-AS1 inhibited autophagy and aggravated apoptosis of podocytes via SPAG5/AKT/mTOR pathway.

AGO2 MTOR

1.01e-04777231957155
Pubmed

microRNA-449a reduces growth hormone-stimulated senescent cell burden through PI3K-mTOR signaling.

CSHL1 MTOR

1.01e-04777236976763
Pubmed

Deubiquitylation and stabilization of PTEN by USP13.

USP7 USP4

1.01e-04777224270891
Pubmed

The neurofibromin GAP-related domain rescues endothelial but not neural crest development in Nf1 mice.

NF1 MTOR

1.01e-04777216906226
Pubmed

Energy balance, the PI3K-AKT-mTOR pathway genes, and the risk of bladder cancer.

RPS6KA5 MTOR

1.01e-04777220354165
Pubmed

Neurofibromatosis-1 regulates mTOR-mediated astrocyte growth and glioma formation in a TSC/Rheb-independent manner.

NF1 MTOR

1.01e-04777221896734
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

KHDRBS1 ZNF592 DHX38 DDX42 UTP20 XPO1 PAK1IP1 TRRAP PRPF40A

1.06e-0484777935850772
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

GTF2F2 KHDRBS1 DHX38 DDX42 SRCAP TRRAP

1.12e-0434177632971831
Pubmed

ATR-Chk2 signaling in p53 activation and DNA damage response during cisplatin-induced apoptosis.

ATRIP HUS1

1.34e-04877218162465
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

KHDRBS1 SBF1 DDX42 USP7 APLP2 XPO1 PAK1IP1 SRCAP TRRAP PRPF40A

1.35e-041082771038697112
Pubmed

Transcriptome analysis of mouse stem cells and early embryos.

RBM33 DOCK9 EIF4G2 SRCAP BIRC6 XPOT

1.58e-0436377614691545
Pubmed

KAP1 facilitates reinstatement of heterochromatin after DNA replication.

KHDRBS1 MTOR DHX38 UTP20 COPG2 PAK1IP1 TRRAP BIRC6

1.67e-0470477829955894
Pubmed

LINC00265 promotes colorectal tumorigenesis via ZMIZ2 and USP7-mediated stabilization of β-catenin.

AGO2 USP7

1.72e-04977231527801
Pubmed

The differential modulation of USP activity by internal regulatory domains, interactors and eight ubiquitin chain types.

USP7 USP4

1.72e-04977222195557
Pubmed

Proteomic analysis reveals GIT1 as a novel mTOR complex component critical for mediating astrocyte survival.

NF1 MTOR

1.72e-04977227340174
Pubmed

Rufy3, a protein specifically expressed in neurons, interacts with actin-bundling protein Fascin to control the growth of axons.

RUFY1 RUFY3

1.72e-04977224720729
Pubmed

Mouse ZAR1-like (XM_359149) colocalizes with mRNA processing components and its dominant-negative mutant caused two-cell-stage embryonic arrest.

AGO2 LIN28A

1.72e-04977220014101
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

TUBGCP6 TRAF7 ACTR8 AGO2 ZNF592 USP7 FASTKD5 SRCAP TRRAP PRPF40A

1.74e-041116771031753913
Pubmed

Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity.

TRAF7 GTF2F2 AGO2 NF1 RPS6KA5 USP7 FASTKD5 TRRAP PLK4

1.82e-0491077936736316
Pubmed

Exportin 4: a mediator of a novel nuclear export pathway in higher eukaryotes.

XPO1 XPOT

2.15e-041077210944119
Pubmed

Tel2 regulates the stability of PI3K-related protein kinases.

MTOR TRRAP

2.15e-041077218160036
InteractionSIRT7 interactions

NF1 SBF1 MTOR DHX38 DDX42 USP7 UTP20 COPG2 XPO1 TRRAP BIRC6 PRPF40A XPOT

3.80e-067447613int:SIRT7
InteractionPOLR1G interactions

GTF2F2 ZNF592 DHX38 USP7 UTP20 FASTKD5 XPO1 SRCAP TRRAP XPOT

1.47e-054897610int:POLR1G
InteractionITGB3 interactions

DHX38 EIF4G2 USP7 XPO1 TRRAP BIRC6

4.42e-05170766int:ITGB3
InteractionSF3B3 interactions

TRAF7 SBF1 DDX42 USP7 UNK SRCAP TRRAP RUFY1 PRPF40A PLK4

4.52e-055587610int:SF3B3
InteractionYY1 interactions

ACTR8 AGO2 ZNF592 MTOR DDX42 USP7 SRCAP TRRAP PRPF40A

5.17e-05454769int:YY1
InteractionYEATS4 interactions

GTF2F2 MTOR XPO1 SRCAP TRRAP PRPF40A

6.47e-05182766int:YEATS4
InteractionHTR6 interactions

NF1 MTOR COPG2 XPOT

6.79e-0558764int:HTR6
InteractionRTL5 interactions

RTL5 USP7

8.38e-054762int:RTL5
InteractionDMAC1 interactions

NF1 MTOR XPO1

8.65e-0523763int:DMAC1
InteractionTNFSF13B interactions

NF1 MTOR XPO1 FAM118A XPOT

8.72e-05119765int:TNFSF13B
InteractionTOP3B interactions

TRAF7 AGO2 SBF1 ZNF592 RBM33 MTOR DOCK9 SCN8A USP7 LAMB2 UNK CACNA1H ABCD1 SRCAP TRRAP BIRC6

9.76e-0514707616int:TOP3B
InteractionRUVBL2 interactions

ACTR8 AGO2 KHDRBS1 MTOR DDX42 CCDC87 USP7 XPO1 SRCAP TRRAP

1.03e-046167610int:RUVBL2
InteractionNPY2R interactions

NT5C1A MTOR FASTKD5 XPO1

1.13e-0466764int:NPY2R
InteractionBSG interactions

DOCK8 MTOR GCC2 USP7 UTP20 FASTKD5 ABCD1 TRRAP RUFY1 XPOT

1.25e-046317610int:BSG
InteractionCTDP1 interactions

GTF2F2 NF1 USP7 COPG2 TRRAP XPOT

1.31e-04207766int:CTDP1
InteractionGPR85 interactions

USP7 UNK

1.39e-045762int:GPR85
InteractionDOCK10 interactions

DOCK9 USP7 DOCK10

1.58e-0428763int:DOCK10
InteractionNPPB interactions

NPR2 APLP2 TRRAP

1.58e-0428763int:NPPB
InteractionTELO2 interactions

ATRIP MTOR XPO1 TRRAP RUFY1

1.58e-04135765int:TELO2
InteractionVSIG1 interactions

NF1 HUS1 UTP20 RUFY1

1.58e-0472764int:VSIG1
InteractionLPIN3 interactions

NF1 USP7 XPO1 BIRC6

1.67e-0473764int:LPIN3
InteractionRNF126 interactions

MTOR EIF4G2 USP7 KLHL42 XPOT

1.75e-04138765int:RNF126
InteractionLGALS7 interactions

DOCK8 USP7 APLP2 USP4 XPO1

1.81e-04139765int:LGALS7
InteractionNUP98 interactions

USP53 USP7 UNK XPO1 RUFY1 XPOT

1.83e-04220766int:NUP98
InteractionSPDL1 interactions

EIF4G2 FADS2 LAMB2 USP4 XPO1 TRRAP KCNAB3

1.85e-04315767int:SPDL1
InteractionFBXO22 interactions

GTF2F2 ZNF592 RBM33 DOCK9 USP7 XPO1 TRRAP RUFY1 XPOT

1.92e-04540769int:FBXO22
GeneFamilyExportins

XPO1 XPOT

1.89e-047552547
GeneFamilyUbiquitin specific peptidases

USP53 USP7 USP4

6.59e-0456553366
GeneFamilyGuanylate cyclase receptors|DENN/MADD domain containing

NPR2 SBF1

2.61e-0325552504
GeneFamilyWD repeat domain containing|Caspase recruitment domain containing|Apoptosome

NLRP1 CARD8

3.74e-0330552959
GeneFamilyZinc fingers FYVE-type|Pleckstrin homology domain containing|Rho guanine nucleotide exchange factors

RUFY1 RUFY3

3.99e-033155281
ToppCellCV-Moderate-7|Moderate / Virus stimulation, Condition and Cluster

DOCK8 DOCK10 XPO1 BIRC6 TMEM200A

1.73e-05185775a6c9203ce6c2892a4a369c9bcfb85720f01cbb3f
ToppCellfacs-Large_Intestine-Proximal-24m-Epithelial-enteroendocrine_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GBP4 RTL5 SCN8A CACNA1H TMEM200A

1.73e-051857752a8104f610fa5ce618f8105521616722462a0d42
ToppCellCV-Moderate-7|CV / Virus stimulation, Condition and Cluster

DOCK8 DOCK10 XPO1 BIRC6 TMEM200A

1.78e-051867758571956890fc9894d766ba294a28e376b4aba428
ToppCell367C-Lymphocytic-NK_cells-NK_cell_B1|NK_cells / Donor, Lineage, Cell class and subclass (all cells)

TRAF7 LAMB2 UTP20 FASTKD5 XPOT

1.97e-051907752434b8ad2976eab7d9147012c28454ab29670709
ToppCell367C-Lymphocytic-NK_cells-NK_cell_B1|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

TRAF7 LAMB2 UTP20 FASTKD5 XPOT

2.02e-0519177539ef8e1d7cc3ebb11717e8a55501515e3b72b177
ToppCellChildren_(3_yrs)-Immune-monocyte|Children_(3_yrs) / Lineage, Cell type, age group and donor

P2RX1 DOCK8 IL1R2 DOCK10 NLRP1

2.28e-05196775cacd69be72e6167814f7adea7c5fa114f3103bbb
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Monocytic|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

NIBAN1 DOCK8 IL1R2 DOCK10 NLRP1

2.28e-05196775291c59b609985167c98a40d4e2caeea2fad74941
ToppCellBL|World / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

NIBAN1 GBP4 DOCK8 IL1R2 CARD8

2.34e-051977751acf0191fa0a25cd20bfd9ea7bf727a1555986a1
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Monocytic-Monocyte-derived_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

NIBAN1 DOCK8 IL1R2 DOCK10 NLRP1

2.34e-05197775826cc6baafab13e7ef5cfcf28cd79d0fbf3af38d
DrugArgentine

STX2 NIBAN1 LAMB2 NLRP1 PRPF40A

8.55e-0833775CID000442941
DrugAntipyrine [60-80-0]; Down 200; 21.2uM; MCF7; HT_HG-U133A

NPR2 NF1 RPS6KA5 FADS2 ABCD1 SRCAP PLK4

5.03e-061997771489_DN
DrugHomochlorcyclizine dihydrochloride [1982-36-1]; Up 200; 10.4uM; MCF7; HT_HG-U133A

STX2 NF1 RPS6KA5 EIF4G2 CACNA1H SRCAP

4.66e-051917767417_UP
Drug3-Acetylcoumarin [3949-36-8]; Down 200; 21.2uM; MCF7; HT_HG-U133A

STX2 NPR2 HUS1 APLP2 CARD8 RUFY3

4.80e-051927763382_DN
DrugReserpinic acid hydrochloride; Up 200; 9.2uM; MCF7; HT_HG-U133A

AP4E1 NF1 SBF1 ZNF592 EIF4G2 SRCAP

5.23e-051957767323_UP
DrugAminopurine, 6-benzyl [1214-39-7]; Down 200; 17.8uM; PC3; HT_HG-U133A

NPR2 NF1 KHDRBS1 HUS1 EIF4G2 DOCK10

5.38e-051967763726_DN
DrugDizocilpine maleate [77086-22-7]; Down 200; 11.8uM; MCF7; HT_HG-U133A

STX2 NF1 EIF4G2 CACNA1H PLK4 CERS4

5.38e-051967762232_DN
DrugTimolol maleate salt [26921-17-5]; Down 200; 9.2uM; PC3; HT_HG-U133A

AP4E1 NF1 DOCK9 EIF4G2 SRCAP PLK4

5.38e-051967764685_DN
DrugMethacycline hydrochloride [3963-95-9]; Up 200; 8.4uM; MCF7; HT_HG-U133A

STX2 AP4E1 B3GNT4 NF1 SBF1 CACNA1H

5.38e-051967767321_UP
Drug2-propylpentanoic acid; Down 200; 50uM; PC3; HT_HG-U133A

STX2 ACTR8 SBF1 EIF4G2 USP7 PLK4

5.38e-051967764446_DN
DrugHeptaminol hydrochloride [543-15-7]; Up 200; 22uM; MCF7; HT_HG-U133A

AP4E1 B3GNT4 ACTR8 NF1 SRCAP KCNAB3

5.53e-051977766015_UP
DrugChloroquine diphosphate [50-63-5]; Up 200; 7.8uM; MCF7; HT_HG-U133A

KHDRBS1 IL1R2 SCN8A DOCK10 CACNA1H SRCAP

5.53e-051977762869_UP
DrugHydroflumethiazide [135-09-1]; Down 200; 12uM; MCF7; HT_HG-U133A

TGFB3 NF1 RPS6KA5 MTOR CARD8 RUFY3

5.53e-051977767019_DN
DrugCorynanthine hydrochloride [66634-44-4]; Up 200; 10.2uM; MCF7; HT_HG-U133A

HUS1 ZNF592 IL1R2 SCN8A CACNA1H ABCD1

5.53e-051977762786_UP
DrugDiflorasone Diacetate [33564-31-7]; Up 200; 8uM; PC3; HT_HG-U133A

NPR2 NF1 NLRP1 FAM118A SRCAP PLK4

5.53e-051977764077_UP
DrugSC 19220; Down 200; 10uM; PC3; HT_HG-U133A

NPR2 SBF1 HUS1 RPS6KA5 ABCD1 SRCAP

5.69e-051987767095_DN
DrugOrnidazole [16773-42-5]; Down 200; 18.2uM; MCF7; HT_HG-U133A

AP4E1 FADS2 CACNA1H SRCAP PLK4 RUFY3

5.69e-051987762272_DN
DrugTriflusal [322-79-2]; Up 200; 16.2uM; MCF7; HT_HG-U133A

TGFB3 B3GNT4 NF1 SBF1 HUS1 USP7

5.69e-051987767451_UP
DrugReserpinic acid hydrochloride; Up 200; 9.2uM; PC3; HT_HG-U133A

NF1 CCDC87 NLRP1 PLK4 CERS4 RUFY3

5.69e-051987766603_UP
DrugMethotrimeprazine maleat salt [7104-38-3]; Down 200; 9uM; PC3; HT_HG-U133A

AP4E1 NF1 SBF1 EIF4G2 NLRP1 SRCAP

5.85e-051997763701_DN
DrugPHA-00745360 [351320-33-7]; Down 200; 10uM; MCF7; HT_HG-U133A

AP4E1 B3GNT4 NF1 SBF1 SRCAP RUFY3

6.02e-052007763907_DN
DrugNSC226080

NT5C1A NIBAN1 AGO2 NF1 RPS6KA5 MTOR EIF4G2 USP7 XPO1 PRPF40A XPOT

6.19e-057827711CID000005040
Drugmagnesium oxide

RPS6KA5 C2 KIR3DL1

6.27e-0523773CID000014792
Drugnitroglycerin

NPR2 IL1R2 UTP20 NLRP1 ABCD1 BIRC6

7.09e-05206776CID000004510
Drug28 N

STX2 NPR2 NLRP1

7.15e-0524773CID000004551
DiseaseMicrocephaly and chorioretinopathy

TUBGCP6 PLK4

1.86e-053742cv:CN263236
DiseaseAutosomal recessive chorioretinopathy-microcephaly syndrome

TUBGCP6 PLK4

1.86e-053742cv:C3502492
DiseaseMicrocephaly with Chorioretinopathy, Autosomal Recessive

TUBGCP6 PLK4

1.86e-053742C3502492
Diseasesphingomyeline C18:1 measurement

FADS2 CERS4

6.17e-055742EFO_0801320
DiseaseSphingomyelin (d18:1/20:1, d18:2/20:0) measurement

FADS2 CERS4

9.25e-056742EFO_0022110
DiseaseSphingomyelin (d18:1/18:1, d18:2/18:0) measurement

FADS2 CERS4

9.25e-056742EFO_0022108
Diseaselevel of Sphingomyelin (d36:2) in blood serum

FADS2 CERS4

1.29e-047742OBA_2045177
Diseaseasthma, type 2 diabetes mellitus

FADS2 IDE

1.72e-048742MONDO_0004979, MONDO_0005148
DiseaseN-acetylputrescine measurement

TUBGCP6 EIF4G2

4.03e-0412742EFO_0800127
Diseaselevel of Phosphatidylinositol (16:0_18:1) in blood serum

USP7 FADS2

4.03e-0412742OBA_2045152
DiseaseProfound Mental Retardation

AP4E1 NF1 DOCK8 SCN8A

4.20e-04139744C0020796
DiseaseMental Retardation, Psychosocial

AP4E1 NF1 DOCK8 SCN8A

4.20e-04139744C0025363
DiseaseMental deficiency

AP4E1 NF1 DOCK8 SCN8A

4.20e-04139744C0917816
Diseasecolon cancer (is_marker_for)

TGFB3 NF1 PLK4

4.45e-0459743DOID:219 (is_marker_for)
DiseaseIntellectual Disability

AP4E1 NF1 DOCK8 MTOR SCN8A TRRAP

9.08e-04447746C3714756
Diseaselevel of Sphingomyelin (d38:2) in blood serum

FADS2 CERS4

1.03e-0319742OBA_2045179
DiseaseSeckel syndrome

ATRIP PLK4

1.39e-0322742C0265202
DiseasePrimary microcephaly

TUBGCP6 PLK4

1.39e-0322742C0431350
DiseaseNeurodevelopmental Disorders

DOCK8 SCN8A SRCAP

1.67e-0393743C1535926
Diseasecholesteryl ester 14:0 measurement

FADS2 CARD8

2.09e-0327742EFO_0010340
DiseaseNeurotoxicity Syndromes

P2RX1 MTOR

2.41e-0329742C0235032
DiseaseEncephalopathy, Toxic

P2RX1 MTOR

2.41e-0329742C0149504
DiseaseToxic Encephalitis

P2RX1 MTOR

2.41e-0329742C0154659
DiseaseChild Development Disorders, Specific

DOCK8 KCNT1

2.41e-0329742C0085997
DiseaseChild Development Deviations

DOCK8 KCNT1

2.41e-0329742C0085996

Protein segments in the cluster

PeptideGeneStartEntry
HSFKKQHICSDFEVM

nan

56

Q0VG73
FKEQVIHHFVAVILM

CERS4

206

Q9HA82
VCFNKLFSMLQVHHV

BIRC6

2641

Q9NR09
IRPHIFFDDQMFHVA

NT5C1A

321

Q9BXI3
GLMFHKAQEFLQHRI

ACTR8

541

Q9H981
FKEAMLQAHRAHQLA

CSHL1

36

Q14406
FELKHMRDVQFNHLT

NPR2

566

P20594
TDFLHVIFQMHEEEV

CCDC87

606

Q9NVE4
EHMVQHFKTQIFGDR

AGO2

76

Q9UKV8
MRQHAFELKHLHENV

AP4E1

586

Q9UPM8
ALAFQQKFHRHMIDL

RBM33

1146

Q96EV2
EMFQVFEDVQRCHFK

ABCD1

421

P33897
FFHKERMEVCENHQH

APLP2

151

Q06481
IFHKDPDVNMLHVFV

FADS2

226

O95864
AMVQDITQKFAHHII

MGAT4C

151

Q9UBM8
LMNFKSFVEELNSHH

LEXM

261

Q3ZCV2
DTKALHQVFEHMLDV

C2

441

P06681
AKHALENMINDFHRA

KCNT1

226

Q5JUK3
AHFGFDEQLMHQIRK

DDX42

256

Q86XP3
SDIMFEHFFLHKEGI

KIR3DL1

146

P43629
HVDTSLFQMAHFKEE

NLRP1

1176

Q9C000
HTEMKEESDIVFHFQ

CLC

41

Q05315
QLDLEAEFHFTHLIM

LAMB2

136

P55268
VFMEHSFKDENHEFQ

GBP4

381

Q96PP9
LQLFKHEMQHFVKVI

TUBGCP6

1666

Q96RT7
EVFHDQLHTFLVMEL

RPS6KA5

486

O75582
EHALMLFGKDFHLIQ

MIER3

291

Q7Z3K6
MQKFLHDHVDLQVSA

EIF4G2

816

P78344
VHQVHLQFPMEFEFS

SBF1

1491

O95248
RIFKDFMHVLEHECQ

PRPF40A

791

O75400
ENEDHFFKHQADMLL

FAM118A

266

Q9NWS6
LVNIVKMFRFTHVDH

FASTKD5

356

Q7L8L6
TDFEMHHNINRFVFE

DOCK10

1966

Q96BY6
FFELLVKSMAQHVHN

DOCK8

986

Q8NF50
FHVDLNHFSVRQMLA

DOCK9

416

Q9BZ29
AHFMLKGDDDVFVHV

B3GNT4

211

Q9C0J1
PSHVLFDHDKFVQMA

FRMPD2

646

Q68DX3
EMDAQHIKDEFFHER

GCC2

366

Q8IWJ2
FLVAHFKNEGMVLEH

CARD8

266

Q9Y2G2
RCIKHMFTNHIVFQF

COPG2

646

Q9UBF2
VHQQFLFSLVEHREM

MACC1

466

Q6ZN28
EHREMHLFDFCVQVE

MACC1

476

Q6ZN28
AHLNMDLHVFIEVFG

KHDRBS1

221

Q07666
HVEDIILHMFQYIQK

IDE

386

P14735
LFMMHCVEVLHQFDQ

ATRIP

736

Q8WXE1
ITHKMFDHVVLVFIF

CACNA1H

1291

O95180
DHLTLMQKVEVFEHA

MTOR

2276

P42345
AEHHLFQREKVEMQL

KCNAB3

256

O43448
VEEVNAAHMKTCLFH

P2RX1

206

P51575
FLMQLETFIADHEVH

RTL5

166

Q5HYW3
LQQFFVVMEHCLKHG

RUFY3

101

Q7L099
QHVLDMLFSAFEKHQ

GTF2F2

181

P13984
LEAFHFDHKTLEEQM

UTP20

1681

O75691
VVVRFFEQHLHSDKM

TMEM200A

111

Q86VY9
HMEIPHFFCEINQVV

OR7A10

171

O76100
QQFFVVMEHCLKHGL

RUFY1

146

Q96T51
VNNKMVHFDLLHEDV

HUS1

256

O60921
FLMPHVFQSHREFKE

SRCAP

791

Q6ZRS2
KPFSENEARHFMHQI

PLK4

106

O00444
TREDLHMDFKCVVHN

IL1R2

316

P27930
VVVEKDHFMDDFFHQ

STX2

21

P32856
LHHFIEVFNVMAVRS

LINC02915

166

Q8N8G6
AECFENMLERIHFHI

USP53

121

Q70EK8
VNKLFEFMHETHDGV

XPO1

566

O14980
HRFHKIFQMDEGLNH

USP4

541

Q13107
FIFADHTNMIHVENV

NIBAN1

526

Q9BZQ8
CEMVFNKKRHIQQHF

ZNF592

866

Q92610
DRFHEMHVALAQKDQ

TRAF7

296

Q6Q0C0
EFMTRHQVHEKEEFK

NF1

1571

P21359
HAFMQAHFKQREADE

SCN8A

1016

Q9UQD0
DFEEDNAAKVHLMVH

DHX38

396

Q92620
NRVKDMFSFEIPEHH

PAK1IP1

246

Q9NWT1
FFSERADLFMHQKIH

ZNF664

11

Q8N3J9
HVKFFCFQVLEHQVK

XPOT

51

O43592
RAHLEQVDKAVFHMQ

UNK

751

Q9C0B0
NEMLVTVAHFHKEVF

USP7

986

Q93009
HDRAAFAMVTHVKQE

TRRAP

2531

Q9Y4A5
HKFDMIQGLAEHNEL

TGFB3

106

P10600
QEACLRFMVVHFHEV

KLHL42

146

Q9P2K6
RFMVVHFHEVLCKPQ

KLHL42

151

Q9P2K6
DVFVHQSKLHMEGFR

LIN28A

71

Q9H9Z2