Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
Domain	NUT	NUTM2A NUTM2G NUTM2F	1.66e-06	5	104	3	IPR024310
Domain	NUT_N	NUTM2A NUTM2G NUTM2F	1.66e-06	5	104	3	IPR024309
Domain	NUT	NUTM2A NUTM2G NUTM2F	1.66e-06	5	104	3	PF12881
Domain	COMP	COMP THBS3	9.18e-05	3	104	2	PF11598
Domain	Thbs/COMP_coiled-coil	COMP THBS3	9.18e-05	3	104	2	IPR024665
Domain	SCAN	ZSCAN4 ZKSCAN2 ZNF496 ZNF500	2.67e-04	56	104	4	SM00431
Domain	TSP_3	COMP THBS3	3.04e-04	5	104	2	PF02412
Domain	TSP3	COMP THBS3	3.04e-04	5	104	2	PS51234
Domain	TSP_CTER	COMP THBS3	3.04e-04	5	104	2	PS51236
Domain	Thrombospondin_3_rpt	COMP THBS3	3.04e-04	5	104	2	IPR017897
Domain	TSP_type-3_rpt	COMP THBS3	3.04e-04	5	104	2	IPR028974
Domain	-	COMP THBS3	3.04e-04	5	104	2	4.10.1080.10
Domain	Thrombospondin_C	COMP THBS3	3.04e-04	5	104	2	IPR008859
Domain	TSP_C	COMP THBS3	3.04e-04	5	104	2	PF05735
Domain	Thrombospondin_3-like_rpt	COMP THBS3	3.04e-04	5	104	2	IPR003367
Domain	SCAN_BOX	ZSCAN4 ZKSCAN2 ZNF496 ZNF500	3.06e-04	58	104	4	PS50804
Domain	SCAN	ZSCAN4 ZKSCAN2 ZNF496 ZNF500	3.06e-04	58	104	4	PF02023
Domain	SCAN_dom	ZSCAN4 ZKSCAN2 ZNF496 ZNF500	3.06e-04	58	104	4	IPR003309
Domain	C2H2_Znf_fam	ZKSCAN2 ZNF496 ZNF641	3.12e-04	24	104	3	IPR027775
Domain	Retrov_capsid_C	ZSCAN4 ZKSCAN2 ZNF496 ZNF500	3.26e-04	59	104	4	IPR008916
Domain	BRK	CHD8 CHD7	4.54e-04	6	104	2	SM00592
Domain	Pectin_lyas_fold	FBXO11 PKHD1	4.54e-04	6	104	2	IPR012334
Domain	PbH1	FBXO11 PKHD1	4.54e-04	6	104	2	SM00710
Domain	BRK_domain	CHD8 CHD7	4.54e-04	6	104	2	IPR006576
Domain	-	FBXO11 PKHD1	4.54e-04	6	104	2	2.160.20.10
Domain	PbH1	FBXO11 PKHD1	4.54e-04	6	104	2	IPR006626
Domain	BRK	CHD8 CHD7	4.54e-04	6	104	2	PF07533
Domain	Pectin_lyase_fold/virulence	FBXO11 PKHD1	8.41e-04	8	104	2	IPR011050
Domain	VitD_rcpt	NR1H2 NR1H4	2.68e-03	14	104	2	IPR000324
Domain	SANT	GON4L ZKSCAN2 CHD7	2.72e-03	50	104	3	SM00717
Domain	SANT/Myb	GON4L ZKSCAN2 CHD7	3.04e-03	52	104	3	IPR001005
Domain	Cadherin_CS	PCDHGC4 CDH22 CELSR3 PCDH11X	3.23e-03	109	104	4	IPR020894
Domain	CADHERIN_1	PCDHGC4 CDH22 CELSR3 PCDH11X	3.67e-03	113	104	4	PS00232
Domain	Cadherin	PCDHGC4 CDH22 CELSR3 PCDH11X	3.67e-03	113	104	4	PF00028
Domain	CADHERIN_2	PCDHGC4 CDH22 CELSR3 PCDH11X	3.79e-03	114	104	4	PS50268
Domain	-	PCDHGC4 CDH22 CELSR3 PCDH11X	3.79e-03	114	104	4	2.60.40.60
Domain	CA	PCDHGC4 CDH22 CELSR3 PCDH11X	3.91e-03	115	104	4	SM00112
Domain	Cadherin-like	PCDHGC4 CDH22 CELSR3 PCDH11X	4.03e-03	116	104	4	IPR015919
Domain	Cadherin	PCDHGC4 CDH22 CELSR3 PCDH11X	4.28e-03	118	104	4	IPR002126
Domain	GAGE	PAGE4 XAGE3	4.94e-03	19	104	2	IPR031320
Domain	GAGE	PAGE4 XAGE3	4.94e-03	19	104	2	SM01379
Pubmed	A dual-activity topoisomerase complex regulates mRNA translation and turnover.	ENGASE EPPK1 SPEG IRAK1 CHD8 SFI1 FASN SLC38A10 CELSR3 MTMR14 KANK3 PKD1 ZNF500 OGDHL BRAT1 HTT PCNT	5.51e-08	1105	108	17	35748872
Pubmed	CTCF-dependent chromatin insulator is linked to epigenetic remodeling.	CHD8 CTCF	9.55e-06	2	108	2	16949368
Pubmed	Silencing of long non-coding RNA H19 downregulates CTCF to protect against atherosclerosis by upregulating PKD1 expression in ApoE knockout mice.	CTCF PKD1	9.55e-06	2	108	2	31757932
Pubmed	CTCF physically links cohesin to chromatin.	STAG1 CTCF	9.55e-06	2	108	2	18550811
Pubmed	Farnesoid X receptor induces GLUT4 expression through FXR response element in the GLUT4 promoter.	SLC2A4 NR1H4	9.55e-06	2	108	2	18769028
Pubmed	CHD8 interacts with CHD7, a protein which is mutated in CHARGE syndrome.	CHD8 CHD7	9.55e-06	2	108	2	20453063
Pubmed	Pathogenicity analysis of novel variations in Chinese Han patients with polycystic kidney disease.	PKD1 PKHD1	9.55e-06	2	108	2	28578020
Pubmed	CTCF and CohesinSA-1 Mark Active Promoters and Boundaries of Repressive Chromatin Domains in Primary Human Erythroid Cells.	STAG1 CTCF	9.55e-06	2	108	2	27219007
Pubmed	Solution structure of the BRK domains from CHD7.	CHD7 CTCF	9.55e-06	2	108	2	17603073
Pubmed	Colorectal carcinomas with CpG island methylator phenotype 1 frequently contain mutations in chromatin regulators.	CHD8 CHD7	9.55e-06	2	108	2	24211491
Pubmed	DNA methylation profiling in human Huntington's disease brain.	CTCF HTT	9.55e-06	2	108	2	26953320
Pubmed	The gene mutated in autosomal recessive polycystic kidney disease encodes a large, receptor-like protein.	PKD1 PKHD1	9.55e-06	2	108	2	11919560
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	STAG1 ARHGEF5 ADNP2 CHD8 CHD7 FBXO38 NFATC2IP ZBTB10 ZBTB11 DDX41	2.07e-05	608	108	10	36089195
Pubmed	Oligodendrocyte precursor survival and differentiation requires chromatin remodeling by Chd7 and Chd8.	CHD8 CHD7	2.86e-05	3	108	2	30108144
Pubmed	Characterization of PKD protein-positive exosome-like vesicles.	PKD1 PKHD1	2.86e-05	3	108	2	19158352
Pubmed	Single-molecule imaging reveals a direct role of CTCF's zinc fingers in SA interaction and cluster-dependent RNA recruitment.	STAG1 CTCF	2.86e-05	3	108	2	38742641
Pubmed	Analysis of the polycystin complex (PCC) in human urinary exosome-like vesicles (ELVs).	PKD1 PKHD1	2.86e-05	3	108	2	32001768
Pubmed	RNF152 Suppresses Fatty Acid Oxidation and Metastasis of Lung Adenocarcinoma by Inhibiting IRAK1-Mediated AKR1B10 Expression.	RNF152 IRAK1	2.86e-05	3	108	2	37717980
Pubmed	Pathological Significance and Prognostic Roles of Thrombospondin-3, 4 and 5 in Bladder Cancer.	COMP THBS3	2.86e-05	3	108	2	33910854
Pubmed	Frequent disruption of chromodomain helicase DNA-binding protein 8 (CHD8) and functionally associated chromatin regulators in prostate cancer.	CHD8 CTCF	2.86e-05	3	108	2	25499215
Pubmed	Expression of polycystins and fibrocystin on primary cilia of lung cells.	PKD1 PKHD1	2.86e-05	3	108	2	25367197
Pubmed	The ATP-dependent chromatin remodeling enzymes CHD6, CHD7, and CHD8 exhibit distinct nucleosome binding and remodeling activities.	CHD8 CHD7	2.86e-05	3	108	2	28533432
Pubmed	Autism-linked CHD gene expression patterns during development predict multi-organ disease phenotypes.	CHD8 CHD7	2.86e-05	3	108	2	30277262
Pubmed	Regulation of absorption and ABC1-mediated efflux of cholesterol by RXR heterodimers.	NR1H2 NR1H4	2.86e-05	3	108	2	10968783
Pubmed	Fibrocystin/Polyductin releases a C-terminal fragment that translocates into mitochondria and suppresses cystogenesis.	PKD1 PKHD1	2.86e-05	3	108	2	37845212
Pubmed	Expression of the insulin-responsive glucose transporter GLUT4 in adipocytes is dependent on liver X receptor alpha.	SLC2A4 NR1H2	2.86e-05	3	108	2	12970362
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	PTPN23 FBXO11 GOLM1 CHD7 PABPN1L ZNF496 AKAP12 ZBTB10 FMN2 OGDHL TANGO2 PARPBP PCNT	3.25e-05	1084	108	13	11544199
Pubmed	WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.	EPPK1 NOC2L GON4L CHD8 CHD7 AP2B1 CTCF DDX41	3.32e-05	394	108	8	27248496
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	EPPK1 NOC2L CHD8 CHD7 STAU1 FASN AP2B1 CTCF ZBTB11 PCNT	3.78e-05	653	108	10	22586326
Pubmed	Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.	ZSCAN4 IRAK1 CHD8 CHD7 FASN ZBTB10 ZBTB11 PCNT	5.03e-05	418	108	8	34709266
Pubmed	Chronic activation of liver X receptor induces beta-cell apoptosis through hyperactivation of lipogenesis: liver X receptor-mediated lipotoxicity in pancreatic beta-cells.	FASN NR1H2	5.71e-05	4	108	2	17369526
Pubmed	Identification and characterization of FAM124B as a novel component of a CHD7 and CHD8 containing complex.	CHD8 CHD7	5.71e-05	4	108	2	23285124
Pubmed	The nuclear receptor FXR, but not LXR, up-regulates bile acid transporter expression in non-alcoholic fatty liver disease.	NR1H2 NR1H4	5.71e-05	4	108	2	26019035
Pubmed	Cilia and polycystic kidney disease.	PKD1 PKHD1	5.71e-05	4	108	2	32475690
Pubmed	Loss of oriented cell division does not initiate cyst formation.	PKD1 PKHD1	5.71e-05	4	108	2	19959710
Pubmed	Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.	EPPK1 ARHGEF5 TMEM151B CHD7 FAM186B AP2B1 PLCH2 PCNT	6.13e-05	430	108	8	35044719
Pubmed	Quantitative interaction proteomics of neurodegenerative disease proteins.	EPPK1 CTSA FASN AP2B1 ZBTB10 EIF3B HTT	6.98e-05	323	108	7	25959826
Pubmed	Thrombospondin-3 augments injury-induced cardiomyopathy by intracellular integrin inhibition and sarcolemmal instability.	COMP THBS3	9.50e-05	5	108	2	30622267
Pubmed	A genetic interaction network of five genes for human polycystic kidney and liver diseases defines polycystin-1 as the central determinant of cyst formation.	PKD1 PKHD1	9.50e-05	5	108	2	21685914
Pubmed	Endothelial cells from humans and mice with polycystic kidney disease are characterized by polyploidy and chromosome segregation defects through survivin down-regulation.	PKD1 PCNT	9.50e-05	5	108	2	21041232
Pubmed	A novel mouse model reveals that polycystin-1 deficiency in ependyma and choroid plexus results in dysfunctional cilia and hydrocephalus.	PKD1 PCNT	9.50e-05	5	108	2	19774080
Pubmed	Cohesins localize with CTCF at the KSHV latency control region and at cellular c-myc and H19/Igf2 insulators.	STAG1 CTCF	9.50e-05	5	108	2	18219272
Pubmed	Skeletal abnormalities in mice lacking extracellular matrix proteins, thrombospondin-1, thrombospondin-3, thrombospondin-5, and type IX collagen.	COMP THBS3	9.50e-05	5	108	2	18467703
Pubmed	Isolation of proteins that interact specifically with the retinoid X receptor: two novel orphan receptors.	NR1H2 NR1H4	9.50e-05	5	108	2	7760852
Pubmed	Enhanced tonic GABAA inhibition in typical absence epilepsy.	CACNA1A SLC6A1	9.50e-05	5	108	2	19966779
Pubmed	Loss of polycystin-1 inhibits Bicc1 expression during mouse development.	PKD1 PKHD1	1.42e-04	6	108	2	24594709
Pubmed	CHARGE and Kabuki syndromes: a phenotypic and molecular link.	CHD8 CHD7	1.42e-04	6	108	2	24705355
Pubmed	Genetic interaction studies link autosomal dominant and recessive polycystic kidney disease in a common pathway.	PKD1 PKHD1	1.42e-04	6	108	2	17575307
Pubmed	Expression of (cac)n/(gtg)n simple repetitive sequences in mRNA of human lymphocytes.	CHD8 PBXIP1	1.42e-04	6	108	2	7505766
Pubmed	A high-throughput approach for measuring temporal changes in the interactome.	PDXDC1 OGFR PTPN23 VTA1 SMOC1 CTSA AKAP12 GTF2F1 FASN AP2B1 ZFYVE19 EIF3B BRAT1 HTT	1.68e-04	1455	108	14	22863883
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	STAG1 ADNP2 FBXO11 SLC6A1 CELSR3 GAR1 AP2B1 PKD1 FMN2 NR1H2 ZBTB11 PBXIP1 PCNT	1.79e-04	1285	108	13	35914814
Pubmed	Hnf1b haploinsufficiency differentially affects developmental target genes in a new renal cysts and diabetes mouse model.	PKD1 PKHD1 NR1H4	1.93e-04	36	108	3	33737325
Pubmed	PKD1 phosphorylation-dependent degradation of SNAIL by SCF-FBXO11 regulates epithelial-mesenchymal transition and metastasis.	FBXO11 PKD1	1.99e-04	7	108	2	25203322
Pubmed	RNF152 positively regulates TLR/IL-1R signaling by enhancing MyD88 oligomerization.	RNF152 IRAK1	1.99e-04	7	108	2	31930677
Pubmed	The ins and outs of a polyglutamine neurodegenerative disease: spinocerebellar ataxia type 1 (SCA1).	CACNA1A HTT	1.99e-04	7	108	2	10860780
Pubmed	Thrombospondins 1 and 2 are important for afferent synapse formation and function in the inner ear.	COMP THBS3	2.64e-04	8	108	2	24460873
Pubmed	The RNA-binding protein bicaudal C regulates polycystin 2 in the kidney by antagonizing miR-17 activity.	PKD1 PKHD1	2.64e-04	8	108	2	20215348
Pubmed	Multiple renal cysts, urinary concentration defects, and pulmonary emphysematous changes in mice lacking TAZ.	PKD1 PKHD1	3.39e-04	9	108	2	18172001
Pubmed	Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.	EPPK1 STAG1 CHD8 CHD7 SFI1 FASN DDX41 PCNT	4.77e-04	582	108	8	20467437
Pubmed	USP7 Regulates Cytokinesis through FBXO38 and KIF20B.	ADNP2 CHD8 FBXO38 ZBTB10	4.82e-04	116	108	4	30804394
Pubmed	Nell1-deficient mice have reduced expression of extracellular matrix proteins causing cranial and vertebral defects.	COL7A1 COMP ADAMTS5 THBS3 PKD1	5.15e-04	210	108	5	16537572
Pubmed	LIS1 regulates CNS lamination by interacting with mNudE, a central component of the centrosome.	SLA PCNT	5.16e-04	11	108	2	11163258
Pubmed	N6-Methyladenosine on mRNA facilitates a phase-separated nuclear body that suppresses myeloid leukemic differentiation.	ADNP2 ZNF526 SLC38A10 ZFYVE19 TANGO2	5.98e-04	217	108	5	34048709
Pubmed	The RNA binding protein MEX3A promotes tumor progression of breast cancer by post-transcriptional regulation of IGFBP4.	EPPK1 TMEM151B CHD8 FASN EIF3B ALPK2	6.12e-04	332	108	6	37433992
Pubmed	Regulation and binding of pregnane X receptor by nuclear receptor corepressor silencing mediator of retinoid and thyroid hormone receptors (SMRT).	NR1H2 NR1H4	6.18e-04	12	108	2	16219912
Pubmed	The nuclear transcription factor RARalpha associates with neuronal RNA granules and suppresses translation.	AP2B1 EIF3B NR1H4	6.44e-04	54	108	3	18495661
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	BRPF3 ADNP2 IRAK1 ZKSCAN2 CHD8 SIPA1 ZNF526 CTCF ZBTB10 FMN2 DDX41	7.15e-04	1116	108	11	31753913
Pubmed	A protein interaction landscape of breast cancer.	EPPK1 SIPA1 CTSA STAU1 AP2B1 MTMR14 CTCF PBXIP1	8.32e-04	634	108	8	34591612
Pubmed	Global phosphoproteome of HT-29 human colon adenocarcinoma cells.	EPPK1 NOC2L GTF2F1	8.34e-04	59	108	3	16083285
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	VGF CACNA1A CHD8 CHD7 SIPA1 ATF6B AKAP12 AP2B1 CTCF PCNT	8.48e-04	963	108	10	28671696
Pubmed	The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.	PDXDC1 IRAK1 PTPN23 STAU1 FASN AP2B1 EIF3B DDX41	8.66e-04	638	108	8	33239621
Pubmed	Phosphorylation of the RAP74 subunit of TFIIF correlates with Tat-activated transcription of the HIV-1 long terminal repeat.	POLR2F GTF2F1	9.77e-04	15	108	2	10704353
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	NOC2L ADNP2 PTPN23 VTA1 CHD8 CHD7 STAU1 FASN AP2B1 ZBTB10 EIF3B DDX41	1.02e-03	1353	108	12	29467282
Pubmed	The interactome of the prostate-specific protein Anoctamin 7.	FASN GAR1 AP2B1	1.11e-03	65	108	3	32176628
Pubmed	Lgr5-expressing secretory cells form a Wnt inhibitory niche in cartilage critical for chondrocyte identity.	COMP ADAMTS5	1.11e-03	16	108	2	37683603
Pubmed	A systematic, genome-wide, phenotype-driven mutagenesis programme for gene function studies in the mouse.	FBXO11 CHD7	1.11e-03	16	108	2	10932191
Pubmed	Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase.	POLR2F GTF2F1	1.11e-03	16	108	2	9409616
Pubmed	Cohesin regulates tissue-specific expression by stabilizing highly occupied cis-regulatory modules.	STAG1 CTCF	1.11e-03	16	108	2	22780989
Pubmed	ZMYM3 regulates BRCA1 localization at damaged chromatin to promote DNA repair.	ADNP2 GON4L CHD8 CTCF	1.26e-03	150	108	4	28242625
Pubmed	MicroRNA-140 plays dual roles in both cartilage development and homeostasis.	COMP ADAMTS5	1.26e-03	17	108	2	20466812
Pubmed	HIV-1 Tat acts as a processivity factor in vitro in conjunction with cellular elongation factors.	POLR2F GTF2F1	1.26e-03	17	108	2	1559613
Pubmed	The transcription factor hepatocyte nuclear factor-6 controls the development of pancreatic ducts in the mouse.	PKD1 PKHD1	1.26e-03	17	108	2	16472605
Pubmed	Autism risk gene POGZ promotes chromatin accessibility and expression of clustered synaptic genes.	SLC6A1 PCDH11X	1.26e-03	17	108	2	34879283
Pubmed	C/EBPbeta, when expressed from the C/ebpalpha gene locus, can functionally replace C/EBPalpha in liver but not in adipose tissue.	SLC2A4 FASN	1.26e-03	17	108	2	10982846
Pubmed	CA150, a nuclear protein associated with the RNA polymerase II holoenzyme, is involved in Tat-activated human immunodeficiency virus type 1 transcription.	POLR2F GTF2F1	1.42e-03	18	108	2	9315662
Pubmed	Reduction of Nipbl impairs cohesin loading locally and affects transcription but not cohesion-dependent functions in a mouse model of Cornelia de Lange Syndrome.	STAG1 PCDH11X	1.58e-03	19	108	2	23920377
Pubmed	SERBP1 Promotes Stress Granule Clearance by Regulating 26S Proteasome Activity and G3BP1 Ubiquitination and Protects Male Germ Cells from Thermostimuli Damage.	PDXDC1 NOC2L OGFR NUTM2A AKAP12 FASN AP2B1 BRAT1 HTT	1.69e-03	878	108	9	37223481
Pubmed	Cyclin F-mediated degradation of ribonucleotide reductase M2 controls genome integrity and DNA repair.	FBXO11 NR1H4	1.75e-03	20	108	2	22632967
Pubmed	Glomerulocystic kidney disease in mice with a targeted inactivation of Wwtr1.	PKD1 PKHD1	1.75e-03	20	108	2	17251353
Pubmed	The cell proliferation antigen Ki-67 organises heterochromatin.	IRAK1 CHD8 CHD7 STAU1 CTCF EIF3B	1.80e-03	410	108	6	26949251
Pubmed	Regulation of the protocadherin Celsr3 gene and its role in globus pallidus development and connectivity.	CELSR3 CTCF	1.93e-03	21	108	2	25113559
Pubmed	Loss of Zeb2 in mesenchyme-derived nephrons causes primary glomerulocystic disease.	PKD1 PKHD1	1.93e-03	21	108	2	27591083
Pubmed	Proteomic analysis of SRm160-containing complexes reveals a conserved association with cohesin.	EPPK1 OGFR GTF2F1 EIF3B	1.99e-03	170	108	4	16159877
Pubmed	Large exons encoding multiple ectodomains are a characteristic feature of protocadherin genes.	PCDHGC4 CELSR3 PCDH11X	2.01e-03	80	108	3	10716726
Pubmed	Large-scale concatenation cDNA sequencing.	VTA1 CDH22 AJAP1 MTMR14 KANK3 ZNF500 PCDH11X	2.01e-03	568	108	7	9110174
Pubmed	Genetic variability of the fatty acid synthase pathway is not associated with prostate cancer risk in the European Prospective Investigation on Cancer (EPIC).	SLC2A4 FASN	2.12e-03	22	108	2	20965718
Pubmed	Nuclear receptors in Leydig cell gene expression and function.	NR1H2 NR1H4	2.12e-03	22	108	2	20375256
Pubmed	E3 ubiquitin ligase RNF123 targets lamin B1 and lamin-binding proteins.	BRME1 FAM186B QRICH2 SLC38A10 PKD1 PKHD1 FMN2 ZBTB11	2.13e-03	736	108	8	29676528
Pubmed	A "double adaptor" method for improved shotgun library construction.	VTA1 CDH22 AJAP1 MTMR14 KANK3 ZNF500 PCDH11X	2.14e-03	574	108	7	8619474
Pubmed	The Repeat Expansion Diseases: The dark side of DNA repair.	CACNA1A HTT	2.32e-03	23	108	2	26002199
Cytoband	20q13.1	CTSA STAU1 CDH22	1.54e-06	10	109	3	20q13.1
GeneFamily	Zinc fingers C2H2-type\|ZF class homeoboxes and pseudogenes	ZSCAN4 ADNP2 ZKSCAN2 ZNF496 ZNF526 CTCF ZNF641 ZNF500 ZBTB10 ZBTB11	2.93e-04	718	67	10	28
GeneFamily	GATA zinc finger domain containing\|Myb/SANT domain containing	GON4L ZKSCAN2 CHD7	9.98e-04	53	67	3	532
Coexpression	GSE9650_EFFECTOR_VS_EXHAUSTED_CD8_TCELL_UP	GDAP2 GOLM1 CTSA ITGB7 ZFYVE19 EIF3B DDX41	1.86e-05	200	107	7	M5833
Coexpression	GSE7460_TREG_VS_TCONV_ACT_WITH_TGFB_DN	ENGASE OGFR CHD7 CTSA ZNF526 FASN MTMR14	1.86e-05	200	107	7	M5693
ToppCell	droplet-Lung-LUNG-1m-Mesenchymal-bronchial_smooth_muscle_cell\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ARHGEF5 SPEG FAM161B ADAMTS5 SMOC1 SLC2A4 THBS3	4.29e-07	189	109	7	4dc32b463546bbe7250dddd281b92ad17ec22da1
ToppCell	droplet-Lung-LUNG-1m-Mesenchymal-Airway_Smooth_Muscle\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ARHGEF5 SPEG FAM161B ADAMTS5 SMOC1 SLC2A4 THBS3	4.29e-07	189	109	7	0d06bf0d7191d13a1c4f30a7881e7ea1093bfd6f
ToppCell	facs-Mammary_Gland-Mammary_Gland-21m-Mesenchymal\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CADM3 ADAMTS5 ITGB7 AKAP12 THBS3 NR1H4	3.78e-06	169	109	6	bb43abad2c049b7f4d307737347290e01b3339a3
ToppCell	facs-Mammary_Gland-Mammary_Gland-21m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CADM3 ADAMTS5 ITGB7 AKAP12 THBS3 NR1H4	3.78e-06	169	109	6	5f18e3f40a5b1b167903f37516ec8181e889c7c5
ToppCell	droplet-Kidney-nan-18m-Epithelial-Pecam____kidney_capillary_endothelial_cell\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	VGF CACNA1A PCDHGC4 SPEG ADAMTS5 PABPN1L	3.78e-06	169	109	6	87116c33c5ca8cb1862e103e5607b1df4d264569
ToppCell	facs-Mammary_Gland-Mammary_Gland-21m-Mesenchymal-stromal_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CADM3 ADAMTS5 ITGB7 AKAP12 THBS3 NR1H4	3.78e-06	169	109	6	8bfa2d3bb541d02f55d7c95b8fd156c8403befca
ToppCell	10x_3'_v2v3-Non-neoplastic-Vascular-Mural_cell-Pericyte-B\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	COL7A1 RNF152 TMEM151B SLC2A4 SLC6A1 KANK3	4.04e-06	171	109	6	a4a2c5dc995589fbe3d4ca6ee1df888807e4ae34
ToppCell	Adult-Endothelial-endothelial_cell_of_lymph_vessel-D122\|Adult / Lineage, Cell type, age group and donor	RNF152 SMOC1 AKAP12 CDH22 PTPRB KANK3	4.32e-06	173	109	6	dba09ba9748871e38a16449d500ae4d7b405c42f
ToppCell	COVID-19-kidney-Epi_(Mes)\|COVID-19 / Disease (COVID-19 only), tissue and cell type	CADM3 TMEM151B PKHD1 FMN2 NR1H4 ALPK2	5.09e-06	178	109	6	544379f5a6145429762258d426b876bb36c112f5
ToppCell	Children_(3_yrs)-Endothelial-endothelial_cell_of_lymph_vessel\|Children_(3_yrs) / Lineage, Cell type, age group and donor	RNF152 SMOC1 AKAP12 CDH22 PTPRB KANK3	6.96e-06	188	109	6	c2805232618a7b6f844d34e37ad458a9923dbfe1
ToppCell	Parenchymal-NucSeq-Endothelial-Endothelia_lymphatic\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	RNF152 SMOC1 AKAP12 CDH22 PTPRB KANK3	9.36e-06	198	109	6	9ab0db78394e730f6866b2db80047149024ad5f6
ToppCell	Parenchymal-NucSeq-Endothelial-Endothelia_lymphatic-Endothelia_Lymphatic\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	RNF152 SMOC1 AKAP12 CDH22 PTPRB KANK3	9.36e-06	198	109	6	e47d0e2c6353315c85d7007742bb16b0f05795ed
ToppCell	Fetal_29-31_weeks-Epithelial-lung_neuroendocrine_cell_(PNEC)-D062\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	VGF CACNA1A SMOC1 ZNF526 CELSR3	2.62e-05	142	109	5	819e983688d126d89a71abc03d72525cc759a347
ToppCell	PBMC-Mild-cDC_7\|Mild / Compartment, Disease Groups and Clusters	CACNA1A FRMPD2 TNFRSF10D SMOC1 NUTM2E	2.62e-05	142	109	5	58f66f35646f281e64d634e6c26adbd1d4e6c830
ToppCell	Endothelial-B-Donor_01\|World / lung cells shred on cell class, cell subclass, sample id	RNF152 ADAMTS5 AKAP12 CDH22 KANK3	5.36e-05	165	109	5	b6893882472aeb0d18e26f47eaec9d53688afcde
ToppCell	facs-Marrow-Granulocytes-18m-Lymphocytic-naive_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL7A1 AKAP12 ZBTB10 FMN2 ALPK2	5.68e-05	167	109	5	528493896aebe7d03d4b6ad2341b12927859e2e4
ToppCell	facs-Marrow-Granulocytes-18m-Lymphocytic-naive_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL7A1 AKAP12 ZBTB10 FMN2 ALPK2	5.68e-05	167	109	5	a82e85caf79395baa48380786d9df32a86dfd1ce
ToppCell	Endothelial-B-Donor_05\|World / lung cells shred on cell class, cell subclass, sample id	ADAMTS5 SMOC1 AKAP12 CDH22 KANK3	5.84e-05	168	109	5	4977c3837fbb1f36c89fddd5764e37290ac25ad8
ToppCell	Endothelial-B-Donor_02\|World / lung cells shred on cell class, cell subclass, sample id	ADAMTS5 SMOC1 AKAP12 CDH22 KANK3	6.01e-05	169	109	5	8889c9e8af1ab0b093d57b69abd80b59b3461be9
ToppCell	Endothelial-B-Donor_08\|World / lung cells shred on cell class, cell subclass, sample id	RNF152 ADAMTS5 AKAP12 CDH22 KANK3	6.35e-05	171	109	5	07ff7059071da83da1d8f266a586573920d75b58
ToppCell	Endothelial-B-IPF_04\|World / lung cells shred on cell class, cell subclass, sample id	RNF152 ADAMTS5 SMOC1 AKAP12 KANK3	6.53e-05	172	109	5	d4e98ff9c7cbc95457e1d71fa60f151a2f178dae
ToppCell	Endothelial-B-Donor_06\|World / lung cells shred on cell class, cell subclass, sample id	RNF152 ADAMTS5 AKAP12 PTPRB KANK3	6.53e-05	172	109	5	8a527dff06d841a86c7eb04a1dd9630787294da4
ToppCell	droplet-Kidney-KIDNEY-30m-Epithelial-Epcam____podocyte-3\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL7A1 PABPN1L PLCH2 PCDH11X FMN2	6.89e-05	174	109	5	76310c0af1d7df6a4de3816838b2ac2892f68746
ToppCell	5'-Adult-LargeIntestine-Epithelial-neuro-epithelial-EC_cells_(TAC1+)\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	VGF CACNA1A SMOC1 CDH22 FMN2	7.08e-05	175	109	5	182e45f5c02214d6b9f317ff5dc43af8b42de978
ToppCell	Control-Neuronal_cells-Neuronal_cells\|Control / group, cell type (main and fine annotations)	SMOC1 AKAP12 CDH22 PTPRB KANK3	7.28e-05	176	109	5	98c07d26ba0dc0fe15ca0ea81f633d4591782bd1
ToppCell	Control-Neuronal_cells\|Control / group, cell type (main and fine annotations)	SMOC1 AKAP12 CDH22 PTPRB KANK3	7.28e-05	176	109	5	c29d09ecf0eb17f767d78af4b7f2e7725c967ff8
ToppCell	cellseq2-Mesenchymal-Myocytic-Myocytic_1-Pericyte\|cellseq2 / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	COL7A1 RNF152 ADAMTS5 SLC2A4 SLC6A1	7.47e-05	177	109	5	68263456a3c93cd195b321b309ff59e156d732fe
ToppCell	cellseq2-Mesenchymal-Myocytic-Myocytic_1\|cellseq2 / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	COL7A1 RNF152 ADAMTS5 SLC2A4 SLC6A1	7.47e-05	177	109	5	e415e448c37adc102d766235e9953dec32c021f1
ToppCell	Ciliated_cells-B-Donor_06\|World / lung cells shred on cell class, cell subclass, sample id	CFAP73 ZSCAN4 FRMPD2 C2orf81 FMN2	8.09e-05	180	109	5	bdea5ec6b60fc8c7cce4d71db5da74ac8675e211
ToppCell	droplet-Lung-3m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l25\|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CADM3 SGMS2 ADAMTS5 THBS3 NR1H4	8.09e-05	180	109	5	c4068fe47408cfd899131a85fa4b7e5908926f94
ToppCell	facs-Marrow-T_cells-18m-Lymphocytic-pre_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AKAP12 SLC6A1 ZNF641 KCTD3 PKHD1	8.75e-05	183	109	5	bc24145855bf4d027a8058bf92bc796c10f241bb
ToppCell	facs-Marrow-T_cells-18m-Lymphocytic-precursor_B_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AKAP12 SLC6A1 ZNF641 KCTD3 PKHD1	8.75e-05	183	109	5	4c325ee6da070513097a11445ec95b0415ffd8a2
ToppCell	Control-Neu_4\|World / 5 Neutrophil clusters in COVID-19 patients	CACNA1A GON4L SLC2A4 HTT PCNT	8.97e-05	184	109	5	ce7f044956613118ee2e9fb6af2455c3166cb414
ToppCell	droplet-Mammary_Gland-nan-21m-Endothelial-nan\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AKAP12 PTPRB CLIC5 KANK3 FES	9.20e-05	185	109	5	62cfcb0e2a9e6718e6b200dfbb1a81eaead229b5
ToppCell	COVID-19-Neuronal_cells-Neuronal_cells\|COVID-19 / group, cell type (main and fine annotations)	SMOC1 AKAP12 CDH22 PTPRB KANK3	9.20e-05	185	109	5	4a095829992b39856a73bdfac03ee68b9aa0d3b8
ToppCell	COVID-19-Neuronal_cells\|COVID-19 / group, cell type (main and fine annotations)	SMOC1 AKAP12 CDH22 PTPRB KANK3	9.20e-05	185	109	5	36ce23893915f5c380cca39b2c33a516edf31c3a
ToppCell	droplet-Bladder-nan-24m-Endothelial-nan\|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	BRME1 SLC2A4 PTPRB CLIC5 KANK3	9.20e-05	185	109	5	90caab8d9361a541c5d5121c97c3f1cdffeeae4a
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Neuronal-interneuron\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CACNA1A CADM3 CHD7 KCNC3 PLCH2	9.44e-05	186	109	5	d1d01ce46e62944aa9864eda47e8401b5f0d2bdc
ToppCell	COPD-Stromal-Pericyte\|World / Disease state, Lineage and Cell class	RNF152 PABPN1L SLC2A4 AKAP12 SLC6A1	9.44e-05	186	109	5	8adfd2d1fda4e8aecc95192ea627bf7ed5214b8d
ToppCell	TCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1\|TCGA-Pancreas / Sample_Type by Project: Shred V9	STAG1 FBXO38 CRACD CLIC5 CTCF	9.44e-05	186	109	5	03db813598b67b1e08f759758a1c2023396921fa
ToppCell	droplet-Lung-18m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l39\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	ABRA SPEG ADAMTS5 SMOC1 SLC2A4	9.68e-05	187	109	5	218c9b4f28499389c43005d9626af2ac01066027
ToppCell	facs-Brain_Non-Myeloid-Cerebellum_-18m-Neuronal-interneuron\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CACNA1A CADM3 CHD7 KCNC3 PLCH2	9.68e-05	187	109	5	1b2fdbfb1ce3f19795dfc4b1da5a94f4b057ec41
ToppCell	droplet-Lung-1m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l17\|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CADM3 ADAMTS5 SMOC1 RTN2 PCDH11X	9.68e-05	187	109	5	ed7ab4cf4629d96dad5c74d536fc428d0a8d4eb9
ToppCell	droplet-Lung-18m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	ABRA SPEG ADAMTS5 SMOC1 SLC2A4	9.68e-05	187	109	5	c7ac4b328efc2ebb72f71154661914193ff402ca
ToppCell	3'-Broncho-tracheal-Epithelial-Neuro-endocrine/ionocytic\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	VGF CACNA1A GOLM1 SMOC1 CDH22	9.93e-05	188	109	5	1f912ea015f50570e848259d948a0ba682d64bb4
ToppCell	facs-Brain_Non-Myeloid-Cerebellum-24m-Neuronal-neuron\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CACNA1A CADM3 TMEM151B KCNC3 ALPK2	9.93e-05	188	109	5	1efbc99bcd6542e5d9fa91edb7c4295167914786
ToppCell	TCGA-Bone_and_Soft_Tissue-Primary_Tumor-Sarcoma-Undifferentiated_Pleomorphic_Sarcoma\|TCGA-Bone_and_Soft_Tissue / Sample_Type by Project: Shred V9	NOC2L IRAK1 CTSA GAR1 EIF3B	9.93e-05	188	109	5	3df5a5b645403914c4d0506e2d93f8a8a98e3fa6
ToppCell	droplet-Limb_Muscle-nan-3m-Mesenchymal-unknown\|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ABRA SPEG SLC2A4 PLCH2 PCDH11X	9.93e-05	188	109	5	d534ed9870405a3c1075962308f72b460aed17bf
ToppCell	Children_(3_yrs)-Endothelial-endothelial_cell_of_lymph_vessel-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	SMOC1 AKAP12 CDH22 PTPRB KANK3	9.93e-05	188	109	5	aeecbc057dc823f8fcea8a98f18d213bacc7f4db
ToppCell	Children_(3_yrs)-Endothelial-endothelial_cell_of_lymph_vessel-D032\|Children_(3_yrs) / Lineage, Cell type, age group and donor	SMOC1 AKAP12 CDH22 PTPRB KANK3	1.04e-04	190	109	5	6e6ce6dd549d1c38cfef5b3f8be06ab01ce344b7
ToppCell	Adult-Endothelial-endothelial_cell_of_lymph_vessel\|Adult / Lineage, Cell type, age group and donor	RNF152 SMOC1 AKAP12 PTPRB KANK3	1.04e-04	190	109	5	91bf3b7e9148589757436a53a4f58e0ebfe54400
ToppCell	PND03-Endothelial-Endothelial_blood-vessel-Macrovascular_EC-VEC-VEC_mature\|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	GOLM1 ADAMTS5 PTPRB AJAP1 KANK3	1.07e-04	191	109	5	fcdf3a747038e346a467eae8b7c293592658b53f
ToppCell	Mid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L1-3_VIP_GGH\|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	VGF CHD7 SMOC1 SLC6A1 CRACD	1.07e-04	191	109	5	06760c3bb40e4f66879a5f5e09c9abfce4ebbba3
ToppCell	3'-GW_trimst-1-LargeIntestine-Neuronal-neurons_B-Branch_B1_(eMN)\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CADM3 ZSCAN4 TMEM151B CHD7 CELSR3	1.10e-04	192	109	5	d8f5df2c2a50e567f24ebecc8033ac97ba89d9c5
ToppCell	droplet-Mammary_Gland-nan-18m-Endothelial-endothelial_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COMP AKAP12 PTPRB CLIC5 KANK3	1.10e-04	192	109	5	945153c41dde6e90d103206955e1707b54eb0665
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	VGF CHD7 SMOC1 SLC6A1 CRACD	1.10e-04	192	109	5	025fac36b862f9ca7f96fb4a1946c44ba7cbc382
ToppCell	droplet-Mammary_Gland-nan-18m-Endothelial\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COMP AKAP12 PTPRB CLIC5 KANK3	1.10e-04	192	109	5	6ab50579c63f31ca2cd41063a99b129f11c07510
ToppCell	human_hepatoblastoma-Endothelial_cells\|human_hepatoblastoma / Sample and Cell Type and Tumor Cluster (all cells)	ADAMTS5 TNFRSF10D AKAP12 PTPRB KANK3	1.10e-04	192	109	5	e09f609fed033a25baacaf4a07bbbae1076da366
ToppCell	Mid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2\|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	VGF CHD7 SMOC1 SLC6A1 CRACD	1.10e-04	192	109	5	6a252e298f8a454623fa9c1c893a7a45a886d694
ToppCell	3'-GW_trimst-1-LargeIntestine-Neuronal-neurons_B\|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	CADM3 ZSCAN4 TMEM151B CHD7 CELSR3	1.12e-04	193	109	5	9661ea0ee7273928c7de2a9f49e853595fa77699
ToppCell	COPD-Endothelial-Lymphatic\|World / Disease state, Lineage and Cell class	RNF152 SMOC1 AKAP12 PTPRB KANK3	1.12e-04	193	109	5	25bdc557055b5bce6a21f8696b48e991c696b979
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_SST-Inh_L3-5_SST_MAFB\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	COL7A1 RNF152 SLC6A1 CRACD PCDH11X	1.12e-04	193	109	5	c7e9e6e4bf5e07c9cbdf1aa7c8828f4b2500e3ff
ToppCell	primary_auditory_cortex_(A1C)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_SST-Inh_L4-6_SST_MTHFD2P6\|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	VGF RNF152 SLC6A1 CRACD PCDH11X	1.12e-04	193	109	5	2c15186d15545804cc262da9137ab825609d4b2c
ToppCell	nucseq-Endothelial-Endothelial_Lymphatic-LEC\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	RNF152 SMOC1 AKAP12 PTPRB KANK3	1.15e-04	194	109	5	f772a9f9ef8635aeaeb8b022dbb94e9672b36ead
ToppCell	10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_OPC\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	POLR2F GOLM1 CHD7 SMOC1 AJAP1	1.15e-04	194	109	5	920955e775617d6156c5ee8b90d2cecd01a70e12
ToppCell	nucseq-Endothelial-Endothelial_Lymphatic-LEC-LEC\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	RNF152 SMOC1 AKAP12 PTPRB KANK3	1.15e-04	194	109	5	3b73f2d305a7566f7ab567e5f18c82cd3d80e32c
ToppCell	Bronchial-NucSeq-Epithelial-Epi_airway_neuro-secretory\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	CDH22 CELSR3 KCNC3 FMN2 OGDHL	1.15e-04	194	109	5	2dcc3b99dbedaf8a6916891c85091ddb79d7ee31
ToppCell	nucseq-Endothelial-Endothelial_Lymphatic\|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2	RNF152 SMOC1 AKAP12 PTPRB KANK3	1.15e-04	194	109	5	5d2b3ed5374e2ab10c1c7eb3a03139fc95036a48
ToppCell	droplet-Mammary_Gland-nan-18m-Endothelial-endothelial_cell\|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COMP AKAP12 PTPRB CLIC5 KANK3	1.18e-04	195	109	5	4db30b3bc65c25626f828cd4f867f20c71809898
ToppCell	10x_3'_v2v3-Neoplastic-Stem-like-NPC-like\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	POLR2F GOLM1 CHD7 SMOC1 AJAP1	1.21e-04	196	109	5	fe2dd3a93fe22da93e24a400e154a68757985fc8
ToppCell	distal-3-Epithelial-Ionocyte\|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	EPPK1 RNF152 SMOC1 CDH22 FMN2	1.21e-04	196	109	5	6ed146481dd04fb271eadc47d68eb3ae38986db6
ToppCell	Bronchial-NucSeq-Epithelial-Epi_submucosal-gland-Myoepithelial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL7A1 SMOC1 CDH22 AJAP1 PLCH2	1.21e-04	196	109	5	a58bdf9de05d13d84211e09a933679d485bf8ab4
ToppCell	distal-Endothelial-Lymphatic-1\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	ZSCAN4 SMOC1 AKAP12 CDH22 KANK3	1.21e-04	196	109	5	b0f23dc802a2c2a56a08d398a464ea78b58ade4c
ToppCell	Bronchial-NucSeq-Stromal-Peri/Epineurial_-NAF_epineurial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	FAM161B AKAP12 SLC6A1 FMN2 ALPK2	1.24e-04	197	109	5	dfeb4a0eb4dfba90f4a3e6ba31e0ab0e4aba5849
ToppCell	Tracheal-NucSeq-Endothelial-Endothelia_vascular-VE_capillary\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	TNFRSF10D AKAP12 PTPRB CLIC5 KANK3	1.24e-04	197	109	5	31bec97c3952c48031bd66a5dad16a70a61519c3
ToppCell	Bronchial-NucSeq-Endothelial-Endothelia_lymphatic-Endothelia_Lymphatic\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	SMOC1 AKAP12 CDH22 PTPRB KANK3	1.27e-04	198	109	5	b3a020522e064bb61949d38e442f24026e339364
ToppCell	Bronchial-NucSeq-Endothelial-Endothelia_lymphatic\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	SMOC1 AKAP12 CDH22 PTPRB KANK3	1.27e-04	198	109	5	fc4b7c3ad52bc5c8b40fa04a156bfbb58afa2872
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1--L1-3\|Neuronal / cells hierarchy compared to all cells using T-Statistic	CACNA1A COL7A1 RNF152 SLC6A1 CRACD	1.33e-04	200	109	5	f3c710f0fc8a7bfb5371d1aff6e3d8f266953153
ToppCell	Parenchyma_Control_(B.)-Stromal-TX-Mesothelial-2\|Parenchyma_Control_(B.) / Sample group, Lineage and Cell type	CADM3 ADAMTS5 AKAP12 XAGE3 FMN2	1.33e-04	200	109	5	b33901d91b3af5c0cf310eede30ce03af90c9783
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1-\|Neuronal / cells hierarchy compared to all cells using T-Statistic	CACNA1A COL7A1 RNF152 SLC6A1 CRACD	1.33e-04	200	109	5	70a06fd7fb8de2c8ec3e3182e4476ced049daeae
ToppCell	Neuronal-Inhibitory-iA-iA_3(VIP)-VIP_3\|Neuronal / cells hierarchy compared to all cells using T-Statistic	VGF CHD7 SMOC1 SLC6A1 CRACD	1.33e-04	200	109	5	7e51715525fdb001b7042b2bfcb9de81ecb5e4ee
ToppCell	LPS_anti-TNF-Epithelial_alveolar-AT_1\|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type	SGMS2 CHD7 CLIC5 PKHD1 OGDHL	1.33e-04	200	109	5	8683445ad5b70748c4a1f12eb77d47623085147e
ToppCell	Lung_Parenchyma-Control-Mesenchymal-Mesenchymal-Mesothelial-2\|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)	CADM3 ADAMTS5 AKAP12 XAGE3 FMN2	1.33e-04	200	109	5	23bc13983f6bdf95e63109b8bc14c4921ca85c3a
ToppCell	Fetal_brain-organoid_Tanaka_cellReport-GW16-Neuronal-Intermediate\|GW16 / Sample Type, Dataset, Time_group, and Cell type.	FASN CDH22 PLCH2 KCTD3 FMN2	1.33e-04	200	109	5	a3fcd901cb281920f1bafdfd676399a6dc37355e
ToppCell	Neuronal-Inhibitory-iB-iB_4(SST)-CALB1\|Neuronal / cells hierarchy compared to all cells using T-Statistic	CACNA1A COL7A1 RNF152 SLC6A1 CRACD	1.33e-04	200	109	5	1639982d9d994918f7912d12d9d7cfcbc9da4145
ToppCell	Lung_Parenchyma-Control-Mesenchymal-Mesenchymal-Mesothelial-2-\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	CADM3 ADAMTS5 AKAP12 XAGE3 FMN2	1.33e-04	200	109	5	d276062545ecc428a28b12a74f06f3c6bbcff4a3
ToppCell	Neuronal-Inhibitory-iA-iA_3(VIP)\|Neuronal / cells hierarchy compared to all cells using T-Statistic	VGF CHD7 SMOC1 SLC6A1 CRACD	1.33e-04	200	109	5	75649534a98bc738fca62d071de0978dc61eb24f
Drug	S(-)-terguride hydrogen maleate [37686-85-4]; Down 200; 8.8uM; PC3; HT_HG-U133A	CADM3 COMP OGFR GON4L CHD7 CELSR3 GAR1 NFATC2IP NR1H4	4.26e-07	199	107	9	4633_DN
Disease	Intellectual Disability	STAG1 GON4L PTPN23 CHD8 ZNF526 FASN CTCF ZBTB11 HTT	3.48e-05	447	106	9	C3714756
Disease	Mental Retardation, Psychosocial	STAG1 GON4L CHD8 ZNF526 FASN	1.49e-04	139	106	5	C0025363
Disease	Profound Mental Retardation	STAG1 GON4L CHD8 ZNF526 FASN	1.49e-04	139	106	5	C0020796
Disease	Mental deficiency	STAG1 GON4L CHD8 ZNF526 FASN	1.49e-04	139	106	5	C0917816
Disease	cancer antigen 15.3 measurement	GON4L THBS3	2.65e-04	7	106	2	EFO_0010585
Disease	CHARGE syndrome (implicated_via_orthology)	CHD8 CHD7	2.65e-04	7	106	2	DOID:0050834 (implicated_via_orthology)
Disease	Hepatomegaly	ADAMTS5 NR1H2 NR1H4	9.78e-04	54	106	3	C0019209
Disease	isoleucine measurement	VTA1 SFI1 SLC2A4	1.09e-03	56	106	3	EFO_0009793
Disease	Autosomal Recessive Centronuclear Myopathy	SPEG MTMR14	1.30e-03	15	106	2	C3645536
Disease	autosomal recessive polycystic kidney disease (implicated_via_orthology)	PKD1 PKHD1	1.48e-03	16	106	2	DOID:0110861 (implicated_via_orthology)
Disease	mean arterial pressure	SMOC1 SIPA1 SLC2A4 THBS3 PKHD1 FES ZBTB10	2.19e-03	499	106	7	EFO_0006340
Disease	osteoarthritis (biomarker_via_orthology)	ADAMTS5 TNFRSF10D	2.57e-03	21	106	2	DOID:8398 (biomarker_via_orthology)
Disease	colorectal carcinoma (is_implicated_in)	AKAP12 PTPRB	2.82e-03	22	106	2	DOID:0080199 (is_implicated_in)
Disease	breast cancer, COVID-19	GON4L THBS3	2.82e-03	22	106	2	MONDO_0007254, MONDO_0100096

Protein segments in the cluster

Peptide	Gene	Start	Entry
QQDLGRQDPPLAEDI	CACNA1A	1051	O00555
IVDENSNLLPPGEEG	ACSM6	401	Q6P461
PPGVQQQAEEEEGTA	PABPN1L	106	A6NDY0
RAGEQAQPPGDQEPE	BRAT1	756	Q6PJG6
LPQDSGQRVEEVPGD	C1orf167	66	Q5SNV9
GEQNIPRVLNEDELP	CHD8	476	Q9HCK8
EAAEERAEPGQQQPA	EIF3B	11	P55884
VPAQGEAPGEQARDE	EIF3B	101	P55884
EQPQVIPSQGDLLGD	AP2B1	616	P63010
ANGEVETLEQGELPP	CTCF	171	P49711
GPQHEEKQDRDGNIP	ALPK2	716	Q86TB3
GPEDVLQPVQRAEAE	AKAP12	1061	Q02952
RQGEEVQERAEPPGH	ADAMTS5	46	Q9UNA0
QGEELPPEELQESQG	ARHGEF5	206	Q12774
LVPNPGQEDADRDGV	COMP	486	P49747
NNGEVTQPPRILGEA	AJAP1	261	Q9UKB5
ELPAGPQGDAAVLEQ	BRPF3	801	Q9ULD4
QESPRREPEQLGEDV	FAM186B	541	Q8IYM0
ELHGEPTRIQEDPNG	CADM3	171	Q8N126
QGQPPTLDIEDTEGQ	CFAP73	266	A6NFT4
GDPQAIQERLIPGQQ	CHD7	486	Q9P2D1
LQEAHPGEPQEDRGI	CLIC5	91	Q9NZA1
GAEDQRHGEEQPPIL	ADNP2	986	Q6IQ32
QPRGAEPEAQDVDPR	ZFYVE19	396	Q96K21
QPGADQIDVVQPGAD	QRICH2	526	Q9H0J4
DGENILCDNRNEPPQ	PARPBP	516	Q9NWS1
EVEAGNGIPELPQLV	PTPN23	1411	Q9H3S7
EQVAGPLGQNLEVEP	NR1H4	41	Q96RI1
PTDNQDIEPGQEREG	PAGE4	36	O60829
IGNAEGEPVVPERQI	GDAP2	241	Q9NXN4
NPDGNLQERAQVDPL	PTPRB	1121	P23467
NQPPQELGLGELLEE	MTMR14	21	Q8NCE2
QQIGSEDGEPPQQRV	SLC2A4	6	P14672
EDGEPPQQRVTGTLV	SLC2A4	11	P14672
EEQEGGVPQRERPEV	FAM43B	276	Q6ZT52
IPEDGAAARAPEQVQ	OGDHL	871	Q9ULD0
GDEDEEPQSPRIQNI	PDXDC1	71	Q6P996
GDEDEEPQSPRIQNI	PDXDC2P	71	Q6P474
IRDPEQGLEGSLEQP	FAM161B	611	Q96MY7
QQLDLEIGEAAPPGQ	PCDHGC4	136	Q9Y5F7
PAAVDPDVGINGVQN	PCDH11X	161	Q9BZA7
RGDEDDIPLGPQSNV	DDX41	71	Q9UJV9
EQLQRGPNQPVESDE	IRAK1	576	P51617
PGELQQLAQGPEDEL	NOC2L	726	Q9Y3T9
GPRDSQQAPLDGEVE	PCNT	1516	O95613
LEEPRGQQEVLQDQP	ITGB7	96	P26010
GEAAPDQDEIQRLPG	CTSA	26	P10619
PVDVDEEQAGPSGLQ	FBXO38	571	Q6PIJ6
GQPQDEDEEATGILP	HTT	596	P42858
REIADDPLQEPGAQQ	BRME1	486	Q0VDD7
PLPQERNNVGERDDD	FBXO11	66	Q86XK2
APELLQGQSEDEQPD	FRMPD2	86	Q68DX3
RQELLEEEGEGQEPP	CRACD	266	Q6ZU35
EEGRQALEPLPQGIQ	GON4L	1296	Q3T8J9
EPEAEAEPQQVAQGR	KANK3	531	Q6NY19
VPPQGLELADREGQD	C2orf81	491	A6NN90
QPEGGQEQSRVLGPE	COL7A1	901	Q02388
PPSGLLEVQEDAQVG	CDH22	396	Q9UJ99
PEAGTQEEQEDQEPR	ENGASE	26	Q8NFI3
VNEEPQRDRLPQEPG	GOLM1	261	Q8NBJ4
EGPERDQLVIPDGQE	GOLM1	316	Q8NBJ4
LVVEASDQGQEPGPR	CELSR3	511	Q9NYQ7
GPEGNLNQIVTEPDA	FAM104B	61	Q5XKR9
ERGGPEVQQVPAGER	FASN	476	P49327
QRLGEEPEEEAQGPD	FMN2	376	Q9NZ56
EEAQLDRPGQGIAVP	SLC38A10	476	Q9HBR0
EPEQGEVGKRPGQAQ	SLC38A10	551	Q9HBR0
ERAVPENGNLGPIQA	KCTD3	681	Q9Y597
ELQPGGPVQDAENLL	PKD1	531	P98161
EPQDAGPLERSQGDE	OGFR	351	Q9NZT2
EEGEPLEPGELQLNE	FES	286	P07332
AAGQGAERDVPVPQQ	NUTM2A	651	Q8IVF1
AAGQGAERDVPDPQE	NUTM2E	651	B1AL46
GQEAAREVPDPQQRV	NUTM2F	531	A1L443
GQEAAREVPDPQQRV	NUTM2G	516	Q5VZR2
RLQEDPEGTENPLGV	SLA	206	Q13239
GQDQGPPERVVLLGE	GAR1	61	Q9NY12
EEPQEPNRLETGEAG	RTN2	171	O75298
APQQEEGPKGVDEQS	GTF2F1	291	P35269
LNREEPGPEDQEVEQ	SFI1	1186	A8K8P3
DIVRPENGPEQPQAG	SLC6A1	576	P30531
EPQDEGELFQGVDPR	VGF	66	O15240
PLQGGAPQEAVEEEQ	RNF152	141	Q8N8N0
AADEGPAREEQRPIQ	TMEM151B	36	Q8IW70
DRPNVQEPGRVEALQ	NR1H2	381	P55055
EEAEEAPGARPQLQD	EPPK1	2576	P58107
IEEAEEAPGARPQLQ	EPPK1	3111	P58107
IEEAEEAPGARPQLQ	EPPK1	4176	P58107
GAPDPVQDEVQGVTL	SIPA1	786	Q96FS4
EGQENVEILPSGERP	POLR2F	31	P61218
PERLPQDGDNVTVEN	PKHD1	1936	P08F94
LVQPSDGEVGNELPV	PKHD1	3746	P08F94
DGEVGNELPVQPQLV	PKHD1	3751	P08F94
RPAEPVEEENKNGNG	SGMS2	26	Q8NHU3
KPPQGQEQQGQEDEV	NFATC2IP	236	Q8NCF5
GVLEPGQPENDIDRI	ABRA	136	Q8N0Z2
GFSEQEPVQGVEPLQ	ATF6B	441	Q99941
PEEPQRLLEQAEAEG	TNFRSF10D	311	Q9UBN6
EEAQQNPREGIVIPE	SMOC1	236	Q9H4F8
EEGPEGPQRIVLQGD	TEX13D	456	A0A0J9YY54
EGPEGPQRIVLQGDN	TEX13D	581	A0A0J9YY54
LPEAEQNGEVGRQPE	ZBTB11	371	O95625
QDGLREQLQAPVPPD	PBXIP1	246	Q96AQ6
EPGEGPQQEVRRRDQ	SPEG	581	Q15772
QNEPLPERLEVNGRE	STAU1	161	O95793
TPQAGPVGIEEDNDI	VTA1	161	Q9NP79
QRLQGLGRQGPPEEE	PLCH2	1361	O75038
PQQNGEGEPVTLFEV	STAG1	76	Q8WVM7
VPNPLQTDRDEDGVG	THBS3	581	P49746
IIQEENGPRPEEGGV	ZSCAN4	221	Q8NAM6
AQPDLSQGEENEPRV	ZNF496	266	Q96IT1
SQGEENEPRVPELQD	ZNF496	271	Q96IT1
PSRQERGGIEVEPQE	ZKSCAN2	601	Q63HK3
TQNVGLEPELVPGAE	ZNF526	91	Q8TF50
QPPNGRGADEEVELE	ZBTB10	56	Q96DT7
PAPGQEREEDQGAAE	XAGE3	46	Q8WTP9
RDAPLENEGPGIQLE	ZNF500	246	O60304
EAQLPDPAIEDQGGE	TANGO2	201	Q6ICL3
GAEPQVERGSQEERP	ZNF641	36	Q96N77
EEVIEINRADPRPNG	KCNC3	651	Q14003