Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
Pubmed

Calcium handling precedes cardiac differentiation to initiate the first heartbeat.

SOX1 MESP1 ITPR2

9.48e-071740327725084
Pubmed

Development and tissue origins of the mammalian cranial base.

COL2A1 MESP1

7.73e-06440218680740
Pubmed

Mesoderm-derived PDGFRA+ cells regulate the emergence of hematopoietic stem cells in the dorsal aorta.

SOX1 MESP1

2.70e-05740235902769
Pubmed

Region-specific Etv2 ablation revealed the critical origin of hemogenic capacity from Hox6-positive caudal-lateral primitive mesoderm.

SOX1 MESP1

3.60e-05840223438573
Pubmed

Endothelialization and altered hematopoiesis by persistent Etv2 expression in mice.

SOX1 MESP1

3.60e-05840222659386
Pubmed

Pdgfra regulates multipotent cell differentiation towards chondrocytes via inhibiting Wnt9a/beta-catenin pathway during chondrocranial cartilage development.

COL2A1 MESP1

5.77e-051040232800757
Pubmed

Mesp2: a novel mouse gene expressed in the presegmented mesoderm and essential for segmentation initiation.

MESP1 TCF15

7.05e-05114029242490
Pubmed

Genome-wide analysis of multi-ancestry cohorts identifies new loci influencing intraocular pressure and susceptibility to glaucoma.

RAPSN TMCO1

8.45e-051240225173106
Pubmed

The mouse rib-vertebrae mutation disrupts anterior-posterior somite patterning and genetically interacts with a Delta1 null allele.

MESP1 TCF15

9.98e-051340210906448
Pubmed

The bHLH class protein pMesogenin1 can specify paraxial mesoderm phenotypes.

MESP1 TCF15

1.16e-041440210837126
Pubmed

Hedgehog-FGF signaling axis patterns anterior mesoderm during gastrulation.

MESP1 GLIS1

1.34e-041540232561646
Pubmed

Dysregulated PDGFRα signaling alters coronal suture morphogenesis and leads to craniosynostosis through endochondral ossification.

COL2A1 MESP1

1.53e-041640228947535
Pubmed

Transcription factors Mesp2 and Paraxis have critical roles in axial musculoskeletal formation.

COL2A1 TCF15

1.53e-041640217477400
Pubmed

Calcineurin signaling regulates neural induction through antagonizing the BMP pathway.

SOX1 MESP1

1.95e-041840224698271
Pubmed

The murine winged helix transcription factors, Foxc1 and Foxc2, are both required for cardiovascular development and somitogenesis.

MESP1 TCF15

2.18e-041940211562355
Pubmed

HNF3beta and Lim1 interact in the visceral endoderm to regulate primitive streak formation and anterior-posterior polarity in the mouse embryo.

SOX1 MESP1

2.42e-042040210498685
Pubmed

Ror2 knockout mouse as a model for the developmental pathology of autosomal recessive Robinow syndrome.

COL2A1 TCF15

2.67e-042140214745966
Pubmed

Wnt signaling regulates ion channel expression to promote smooth muscle and cartilage formation in developing mouse trachea.

COL2A1 KCNK3

3.21e-042340237873566
Pubmed

Loss of Neogenin alters branchial arch development and leads to craniofacial skeletal defects.

COL2A1 MESP1

5.50e-043040238404688
Pubmed

LKB1 deletion causes early changes in atrial channel expression and electrophysiology prior to atrial fibrillation.

KCNK3 ITPR2

7.07e-043440226378152
Pubmed

Context-specific function of the LIM homeobox 1 transcription factor in head formation of the mouse embryo.

MESP1 PCDH17

7.49e-043540225977363
Pubmed

Wnt9a signaling is required for joint integrity and regulation of Ihh during chondrogenesis.

COL2A1 FGF20

8.83e-043840216818445
Pubmed

Canonical Wnt signaling regulates smooth muscle precursor development in the mouse ureter.

COL2A1 TCF15

8.83e-043840222833126
ToppCelldroplet-Lung-18m-Hematologic-myeloid-Basophil/Mast_cell-basophil_l26|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SDSL RAPSN PANK1 COQ8B

1.54e-051684040e99ecd94ab8e5372e30433d7d0aa76b4d54257a
ToppCelldroplet-Lung-18m-Hematologic-myeloid-Basophil/Mast_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SDSL RAPSN PANK1 COQ8B

1.54e-0516840434722e14f28313f2e4644b3c1861ef12958cee9f
ToppCelldroplet-Lung-nan-18m-Myeloid-Basophil|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SDSL RAPSN PANK1 COQ8B

1.58e-05169404f2e20049a17eee533d49bd5f24a51962d123d132
ToppCelldroplet-Lung-nan-18m-Myeloid-basophil|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SDSL RAPSN PANK1 COQ8B

1.58e-051694044c6892551e9dec94fc62b3beab1e6d424639a1e9
ToppCellfacs-Large_Intestine-Proximal-24m-Epithelial-Brush_cell_of_epithelium_proper_of_large_intestine|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 PNPLA6 PTPN18 MN1

1.62e-05170404c638dfde9ce30190abbe0caea1c3eb874af09857
ToppCelldroplet-Marrow-BM_(NON-STC)-30m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SDSL RAPSN PANK1 COQ8B

1.89e-051774049b4c1ca5c6fca9a7a936dad49a04155903ef9c32
ToppCellfacs-Large_Intestine-Proximal-18m-Epithelial-Brush_cell_of_epithelium_proper_of_large_intestine|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PNPLA6 PTPN18 ADCYAP1 ITPR2

1.94e-0517840409a215a0d6e98e4bb920cabda12af08ff4de3c98
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neuron_precursor|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 SOX1 RAPSN PCDH17

2.21e-051844047712f2e1fae5cdde2d4e355b860dc8536b28e4f6
ToppCellfacs-Heart-RA-24m-Mesenchymal-valve_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 LHFPL6 ADRA2B PLA1A

2.25e-05185404c4ef8d9f8b9769e887daac4efd9dc05738b28ae2
ToppCellE12.5-Endothelial-capillary_endothelial_cell|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TCF15 NOX1 PTPN18 PCDH17

2.25e-05185404e005d3c01a908157f780bbc1d53dd2ed814a39d2
ToppCellE12.5-Endothelial-capillary_endothelial_cell-capillary_endothelial_cell|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

TCF15 NOX1 PTPN18 PCDH17

2.25e-051854040bccc424d0466f7f82baa00127c733640a2d50fb
ToppCellfacs-Brain_Non-Myeloid-Striatum_-18m-Mesenchymal-brain_pericyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 LHFPL6 RAPSN MN1

2.25e-0518540498547c1b1828b76da810ed86082182afaaacdb3f
ToppCellfacs-Heart-RA-24m-Mesenchymal-valve_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 LHFPL6 ADRA2B PLA1A

2.25e-0518540410ddf38d908525b4258f9d2da8be4c56ebc08ff4
ToppCellfacs-Brain_Non-Myeloid-Striatum_-18m-Mesenchymal-Pericyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 LHFPL6 RAPSN MN1

2.25e-051854045f5df92b328be396941b5812d00454b5ff927d30
ToppCellTuft|World / Class top

PNPLA6 PTPN18 MN1 ITPR2

2.30e-05186404f4d83f15ab7b49c0920a322cd832413ece7c9948
ToppCellTuft-tuft-2|World / Class top

PNPLA6 PTPN18 MN1 ITPR2

2.35e-051874044ec6eee866619dfe13c84f5d2e812bb380d37139
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-AT_2-AT1-AT2|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MESP1 PLA1A SLC22A31

2.25e-04132403c6bf0b4b9e33b517629faf4559a21d7ba720ee6a
ToppCellE16.5-samps-Mesenchymal-Myofibroblast-Proliferative_Immature_MyoFibroblast|E16.5-samps / Age Group, Lineage, Cell class and subclass

SOX1 LHFPL6 GLIS1

2.41e-04135403ed0f94d3839eea3b60217c4352159ed481361f13
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_2|Cerebellum / BrainAtlas - Mouse McCarroll V32

ADRA2B TMCO1 PLA1A

2.51e-041374039324b55eac55e0cc1e8e450a4b5374d12e9587a3
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_2-MURAL_Mural.Acta2Rgs5.Kcnj8_(Mural.Acta2Rgs5.Kcnj8)|Cerebellum / BrainAtlas - Mouse McCarroll V32

ADRA2B TMCO1 PLA1A

2.51e-04137403032f8409d0d179e254c8ff632afbda78852a9889
ToppCellCerebellum-Endothelial-MURAL-M1(Rgs5Acta2)-M1_2-MURAL_Mural.Acta2Rgs5.Kcnj8_(Mural.Acta2Rgs5.Kcnj8)-|Cerebellum / BrainAtlas - Mouse McCarroll V32

ADRA2B TMCO1 PLA1A

2.51e-04137403265a4a50e48b13c8b3b0730f818235f71fbd6baa
ToppCellprimary_visual_cortex-Neuronal-GABAergic_neuron-Pvalb-Pvalb_Gabrg1|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

KCNK3 SDSL PCDH17

2.68e-041404032c44e8cc5190226049be7ebc465d685393e701c4
ToppCellcontrol-Myeloid-Monocyte-derived_Macrophage|Myeloid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

PLOD2 MN1 CSTF2T

3.03e-0414640369e9c1ec6eec1151290227902e75e77a4aecc8db
ToppCellmetastatic_Brain-T/NK_cells-Naive_CD8+_T|T/NK_cells / Location, Cell class and cell subclass

COL2A1 ADRA2B GLIS1

3.09e-041474034f7a0c287721befeffabf95b8c5f9ff64149c7c1
ToppCellPND01-03-samps-Mesenchymal-Pericyte|PND01-03-samps / Age Group, Lineage, Cell class and subclass

COL2A1 KCNK3 LHFPL6

3.41e-04152403fc9472bc19f997103da535b035105f01429cb08e
ToppCellileum-BEST4+_Enterocytes|ileum / shred on tissue and cell subclass

RAPSN PLA1A ITPR2

3.54e-04154403608e9c982125e0c2c15b86b1920813845a0db81f
ToppCell5'-GW_trimst-2-SmallIntestine-Epithelial-Tuft-related-Tuft|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

PTPN18 KIF1C ITPR2

4.03e-04161403f5df8c6a340d5026726804b103e32137f363ca40
ToppCellLPS-IL1RA-Epithelial_airway|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MESP1 MAPK15 PLA1A

4.03e-04161403472c354f5ee148b37a5dfb795e83348ecb1643f1
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Astrocytoma|TCGA-Brain / Sample_Type by Project: Shred V9

FGF20 AHNAK KIF1C

4.11e-04162403810881210e015c788814e4fe8d7a24c929cf2621
ToppCellsaliva-Severe-critical_progression_d28-40-Myeloid-Dendritic-conventional_dendritic_cell-DC_c1-CLEC9A|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)

LHFPL6 PLA1A PTPN18

4.33e-0416540360b500eb2c10cccf309b8fb28a9119da22d6889c
ToppCellfacs-Marrow-B-cells-24m-Myeloid-granulocyte_monocyte_progenitor_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LHFPL6 HSD17B14 MOGAT2

4.33e-041654036d315e0734079ad05336cc2c3f24d870c9105bc8
ToppCellfacs-Marrow-B-cells-24m-Myeloid-granulocyte_monocyte_progenitor_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LHFPL6 HSD17B14 MOGAT2

4.33e-0416540384f5597b1bb75f42de9a224196bb8ac198bbe3bf
ToppCellLPS-antiTNF-Epithelial_airway|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MESP1 MAPK15 PLA1A

4.41e-04166403eb942ed68677e55c46cb039046f45686d4062d7c
ToppCell10x5'-bone_marrow-Hematopoietic_progenitors-Progenitor_MEMP|bone_marrow / Manually curated celltypes from each tissue

TCF15 PLOD2 ADCYAP1

4.41e-041664039788486582cc2c5f28b9ea015e235732f9fefb1e
ToppCellILEUM-non-inflamed-(4)_Mast|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

CAPNS2 KY ADCYAP1

4.49e-04167403de0cb257def6049830af068f8f74829a708b810f
ToppCellILEUM-non-inflamed-(4)_Mast_cells|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

CAPNS2 KY ADCYAP1

4.49e-0416740385b39e05eb6e18e06b47e374d808e479ca65173c
ToppCellE18.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte-Pericyte_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

LHFPL6 PLA1A ITPR2

4.49e-04167403b0eb7a40491dd2432f5282f578ce569df86d21a7
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

LHFPL6 MAPK15 ADCYAP1

4.72e-041704033174ea9cf93892a8b41de10fd4ff6f06bb41502d
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2-Exc_L3-5_RORB_HSPB3|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

LHFPL6 MAPK15 ADCYAP1

4.72e-04170403985c6c9e3c593ed0628a481f06c2c91b2ab5d746
ToppCell3'-GW_trimst-2-LargeIntestine-Epithelial-epithelial_progenitor_cell-Stem_cells|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 NUTM1 NOX1

4.81e-041714033a2fefcb62e9d47ae6b3a946c45d3f2dd32c576c
ToppCell3'-GW_trimst-2-LargeIntestine-Epithelial-epithelial_progenitor_cell|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 NUTM1 NOX1

4.81e-041714033ef44a5e3e8f81424f1e9aa302860b6688a549b8
ToppCellASK440-Epithelial-Transformed_epithelium|ASK440 / Donor, Lineage and Cell class of Lung cells from Dropseq

KCNK3 PLOD2 POLDIP3

4.89e-04172403df3800bcd9777d02900eba0cfc26ab73de8a1d95
ToppCellPND07-28-samps-Myeloid-Macrophage-CD163+_Macrophage|PND07-28-samps / Age Group, Lineage, Cell class and subclass

PAOX RAPSN PTPN18

4.89e-041724039a659442dc41bd2a4361a7e38a7ee37a39781667
ToppCellfacs-Mammary_Gland-Mammary_Gland-18m-Endothelial-nan|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 TCF15 PCDH17

4.97e-041734030b79e2a4fd19d524c24b69a6b524ffc6affdabe5
ToppCellPND28-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

KCNK3 LHFPL6 MOGAT2

4.97e-04173403cbd65dd5b01cc959e3ccbc89330ddd0122296ea3
ToppCellPND28-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte-Pericyte_mature|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

KCNK3 LHFPL6 MOGAT2

4.97e-04173403f9d6e892d66f9b94e4d5beb9f5dec9b606bc868a
ToppCellfacs-Large_Intestine-Distal-24m-Epithelial-Brush_cell_of_epithelium_proper_of_large_intestine|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 PTPN18 MN1

4.97e-04173403f0eb48c1283bdde313bb75f6ffc0d2626922d24b
ToppCellfacs-Mammary_Gland-Mammary_Gland-18m-Endothelial-endothelial_cell|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 TCF15 PCDH17

4.97e-04173403a2c1ef3f4d7e9f68fc77ee7c42a4727bdea5da94
ToppCellfacs-Mammary_Gland-Mammary_Gland-18m-Endothelial|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 TCF15 PCDH17

4.97e-041734034830136f1f1976e00ac9af9062a531ac42533041
ToppCellfacs-Heart-RV-24m-Mesenchymal-valve_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LHFPL6 ADRA2B PLA1A

5.14e-04175403bfac175b79bb7d3d81074a2407c206a7647ee75d
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL2A1 LHFPL6 PLOD2

5.14e-041754038b498eea1ec1c1f27b171025c3d08adf3687bafc
ToppCellE16.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_vascular-Pericyte-Pericyte_G2M|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

KCNK3 LHFPL6 ADRA2B

5.14e-04175403fa16c6ba08dc0cc22e8cf049db0577811d080df6
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte-Chondrocyte_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL2A1 LHFPL6 PLOD2

5.14e-04175403a5db428b078938627e61b7e944c1e0c1d61ac2da
ToppCellfacs-Heart-RV-24m-Mesenchymal-valve_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LHFPL6 ADRA2B PLA1A

5.14e-04175403c94fb35bbac95123201ca87ca835aecaefc0c490
ToppCell(0)_Normal/No_Treatment-(3)_LEPR+_perivascular_cells|World / Stress and Cell class

LHFPL6 PLOD2 AHNAK

5.23e-04176403ce2c32b5ce0da848eb4da35ce4d215cdf74d9113
ToppCell3'_v3-lymph-node_spleen-Hematopoietic_progenitors-HSC-MPP|lymph-node_spleen / Manually curated celltypes from each tissue

TCF15 PLOD2 PCDH17

5.23e-0417640332ed5623b8809b9f1aaf7a42dff9807d9376e9c2
ToppCellfacs-GAT-Fat-3m-Lymphocytic-CD4-positive,_alpha-beta_T_cell|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KY PTPN18 ITPR2

5.23e-04176403acd05ca8952710feedbfe377b1330f3c2406d044
ToppCellfacs-Aorta|facs / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL2A1 TCF15 PCDH17

5.23e-041764030b3491451be02c18a16cdb875645be47eb867a7f
ToppCelldroplet-Lung-3m-Mesenchymal-myofibroblast-pericyte_cell-pericyte|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCNK3 LHFPL6 MOGAT2

5.23e-04176403e2b59a904c5c8f9c88e1e63788e9b6485f22edd0
ToppCelldroplet-Marrow-BM-30m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RAPSN GLIS1 COQ8B

5.23e-041764038e4600efeea095a92178cfd26d7c58db7dfc0c80
ToppCelldroplet-Lung-3m-Mesenchymal-myofibroblast-pericyte_cell|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCNK3 LHFPL6 MOGAT2

5.23e-04176403f931192e3cc65414e2245354f443473696cc7ce8
ToppCellPrimary_Motor_Cortex_(M1)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L2-5_VIP_TOX2|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX1 TCF15 MN1

5.31e-0417740385e270b4a0b0da77ffe5987a099e827c02a4adf3
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-Glia_3_(BCAN+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 RAPSN PCDH17

5.31e-04177403d05497d2c80a66ec6a4e1733fea3a5534877a6a7
ToppCellwk_08-11-Epithelial-PNS-FGFBP2+_Neural_progenitor|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

KY RAPSN PCDH17

5.31e-0417740315a5c96ea840376e54933ebe7a8334a11d9ce411
ToppCellE12.5-Mesenchymal-myocytic_cell-vascular_associated_smooth_muscle_cell|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

LHFPL6 TCF15 MN1

5.31e-041774035cdf413f82376a95467322b16d10b0d1e7557e2d
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neuron_precursor-Neuroblast|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 RAPSN PCDH17

5.31e-041774036f3b254e56e722cc23495b49e99a4abce0243cb3
ToppCell3'-GW_trimst-2-LargeIntestine-Neuronal-Glial_immature-Differentiating_glia|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 RAPSN PCDH17

5.31e-041774030417460bdb012bc43d7254377fa53d79cdab3f34
ToppCellASK440-Epithelial-Transformed_epithelium|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

KCNK3 PLOD2 POLDIP3

5.40e-0417840386f1741636ed3e85bb4a65f84949b718fc38c290
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_2|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

LHFPL6 MAPK15 ADCYAP1

5.40e-041784030e1bedf991189d0ef9b40dac9281bdf4739333a1
ToppCell3'-Adult-LargeIntestine-Epithelial-Tuft-related-Tuft|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 PTPN18 ITPR2

5.49e-04179403906555ce2ca264a0215b120c7ff7c9b411de6a34
ToppCelldroplet-Lung-18m-Mesenchymal-myofibroblast-pericyte_cell-pericyte|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCNK3 LHFPL6 HSD17B14

5.49e-04179403fa03ec3cc0132f977b4cb28e7b23789732375183
ToppCelldroplet-Lung-18m-Mesenchymal-myofibroblast-pericyte_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCNK3 LHFPL6 HSD17B14

5.49e-04179403f5bb4d3a27d56698473219970e764084096cc582
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-ENCC/glia_Progenitor|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 RAPSN PANK1

5.58e-04180403c72f15763ba707189e29c85db533557f01c7fdb1
ToppCellsystemic_lupus_erythematosus-treated-Hematopoietic-progenitor_cell|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

PLOD2 PANK1 PCDH17

5.58e-041804032694f5deaed551c53e74d8a9fbd41d3734bb9f37
ToppCellsystemic_lupus_erythematosus-treated-Hematopoietic-progenitor_cell-female|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

PLOD2 PANK1 PCDH17

5.58e-04180403ef0de602fc8ccfd32a06978ac0100afe0ce1beeb
ToppCelldroplet-Kidney-KIDNEY-1m-Epithelial-Pecam____fenestrated_capillary_endothelial|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 LHFPL6 TCF15

5.58e-0418040379c5725f02e038d0187f4a1e1591f2492538aa57
ToppCelldroplet-Marrow-nan-21m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SDSL RAPSN COQ8B

5.58e-0418040341e8155cc7b3dac9d496e4077845ca6af1591a5c
ToppCell3'_v3-bone_marrow-Hematopoietic_Erythro-Mega-Erythrocytic-Meg|bone_marrow / Manually curated celltypes from each tissue

COL2A1 LHFPL6 PLOD2

5.58e-0418040344ba37bead1ac39bce4d3eef00961063c50ced0d
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_PAX6|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

KCNK3 MN1 SLC22A31

5.67e-041814038fd64404e57c22c204d835fc5626f73554257b19
ToppCelldroplet-Marrow-nan-18m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SDSL RAPSN COQ8B

5.67e-04181403382337427be3c11ecd03e9fa2c2e831a9674c6a7
ToppCelldroplet-Heart-nan-3m-Endothelial-coronary_vascular_endothelial_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TCF15 PCDH17 ITPR2

5.67e-0418140392d44892bb15771f0ab5fe61879b204b0acbd9b3
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-cycling_ENCC/glia|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 SOX1 PCDH17

5.67e-04181403f2ebeb4941510c4b6e50f2379c574d1778d6ced1
ToppCell5'-GW_trimst-2-SmallIntestine-Neuronal-Glial_immature-ENCC/glia_Progenitor|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

RAPSN MESP1 PCDH17

5.76e-04182403d6740bca2b974122b8451989365a94a81140afd1
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

LHFPL6 MAPK15 ADCYAP1

5.76e-0418240314a117c5e50db31ee1b2cf4df4d133451fd6d55f
ToppCellfacs-Lung-Endomucin-24m-Mesenchymal-pericyte_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 PAOX SLC30A6

5.76e-04182403be9c312a44868d4ee266a64d066feb8c5bce5687
ToppCelldroplet-Heart-nan-3m-Endothelial-endothelial_cell_of_coronary_artery|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TCF15 PCDH17 ITPR2

5.76e-0418240381279877b920b5a1bc991a07d3031d6458700fe3
ToppCellfacs-Lung-Endomucin-24m-Mesenchymal-Pericyte|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KCNK3 PAOX SLC30A6

5.76e-0418240374dbb706bcaa0f8c922bf3b0424bce5bb27167fa
ToppCellLPS-antiTNF-Epithelial_alveolar-AT_2-AT2|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SDSL PLA1A SLC22A31

5.76e-041824031e2149b222a3e9f64841aed45288a6f29394e7b0
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL2A1 RAPSN PCDH17

5.76e-04182403ecb5624c9074cc6449fad961df54c926c2681d54
ToppCellLPS_only-Epithelial_alveolar-AT_2-AT2|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SDSL PLA1A SLC22A31

5.76e-04182403d1a1feef318062f25493355d7beee8e5fb0e4206
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-AT_1-AT1-AT2|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SDSL PLA1A SLC22A31

5.85e-0418340306ac66726ec53db810ebb90ec69cfdb903da53f6
ToppCellwk_15-18-Epithelial-PNS-Early_Schwann|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

COL2A1 RAPSN PCDH17

5.85e-041834037e8366ec8117d36cec67f77dcb0e9a6032d87fcb
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-AT_2-AT2|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SDSL PLA1A SLC22A31

5.85e-041834035f2db95d44b7de68779de098892892af540fd431
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_4-Exc_L4-5_RORB_RPL31P31|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SDSL LHFPL6 PLOD2

5.85e-041834033ebe334ad570e3525341badb558f369c61daf3d3
ToppCellCOVID-19-kidney-Mito-rich_EC|kidney / Disease (COVID-19 only), tissue and cell type

LHFPL6 MN1 PCDH17

5.85e-041834033c4153479fc4ab2d073d92cee120480015555914
ToppCelldroplet-Lung-30m-Mesenchymal-myofibroblast-pericyte_cell-pericyte|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCNK3 LHFPL6 MOGAT2

5.95e-041844037128a2be291544d3df3ed6c80f21ddda8437dcba
ToppCelldroplet-Lung-30m-Mesenchymal-myofibroblast-pericyte_cell|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCNK3 LHFPL6 MOGAT2

5.95e-04184403d14238f7b0b55a4c8d7040bea854bd221a66ac30
ToppCellLPS-IL1RA-Epithelial_alveolar-AT_2-AT2|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SDSL PLA1A SLC22A31

5.95e-04184403157a3d00165bb4a8c52c3e63ae57d9cf57500be7
ToppCelldroplet-Lung-30m-Mesenchymal-myofibroblast|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KCNK3 LHFPL6 MOGAT2

5.95e-0418440355dde9c4eebac2a33788c1ff1d8fe312d150fad4
ToppCellFetal_29-31_weeks-Mesenchymal-chondrocyte-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL2A1 KY GLIS1

6.04e-041854038ed10ba581849c9c4ac4397226be2b62b4b3b900
DrugMuramic acid, N-acetyl [10597-89-4]; Up 200; 13.6uM; PC3; HT_HG-U133A

COL2A1 PAOX CSTF2T AHNAK KIF1C ITPR2

1.13e-061964064582_UP
Diseaseacisoga measurement

PAOX KIF1C

3.56e-057392EFO_0800068
Diseaselevel of Phosphatidylcholine (16:0_20:5) in blood serum

RAPSN AHNAK

6.09e-059392OBA_2045077
Diseaselevel of Phosphatidylcholine (18:0_20:5) in blood serum

RAPSN AHNAK

6.09e-059392OBA_2045095
Diseasemetabolite measurement, diet measurement

RAPSN MOGAT2 AHNAK

1.15e-0471393EFO_0004725, EFO_0008111
Diseasephosphatidylcholine 40:7 measurement

RAPSN MOGAT2

1.32e-0413392EFO_0021477
DiseaseN-acetyl-isoputreanine measurement

PAOX KIF1C

1.32e-0413392EFO_0800107
Diseaselevel of Phosphatidylcholine (18:1_20:2) in blood serum

RAPSN MOGAT2

1.53e-0414392OBA_2045102
Diseasegestational age, birth measurement

COL2A1 RAPSN

3.52e-0421392EFO_0005112, EFO_0006921
Diseaselevel of Phosphatidylcholine (16:0_20:4) in blood serum

RAPSN AHNAK

3.52e-0421392OBA_2045076
Diseaselevel of Phosphatidylcholine (17:0_20:4) in blood serum

RAPSN AHNAK

5.42e-0426392OBA_2045087
Diseasephosphatidylcholine 38:4 measurement

RAPSN ITPR2

6.30e-0428392EFO_0010386
Diseaselevel of Sterol ester (27:1/20:4) in blood serum

RAPSN AHNAK

7.73e-0431392OBA_2045198
Diseaselevel of Phosphatidylcholine (18:0_20:4) in blood serum

RAPSN AHNAK

7.73e-0431392OBA_2045094
Diseasemetabolite measurement

PAOX RAPSN TMCO1 HSD17B14 ITPR2

8.17e-04560395EFO_0004725
DiseaseMitral valve prolapse

MN1 GLIS1

1.04e-0336392HP_0001634

Protein segments in the cluster

PeptideGeneStartEntry
GGAQTGGLGFNLRIG

PTPN18

431

Q99952
GGVKGGQIGLQAPGL

AHNAK

5626

Q09666
GQVLLGRGVGAIGGQ

ADRA2B

341

P18089
LAGQRGIVGLPGQRG

COL2A1

976

P02458
QLQCRVLGGGGTGGG

PCDH17

386

O14917
GLPGTRAGAQLGGQV

RAPSN

111

Q13702
NQGLRNGGGVGDVLR

ITPR2

2491

Q14571
LGLGIHGIGGIVRGQ

NOX1

216

Q9Y5S8
GNTIALVLGGGGARG

PNPLA6

976

Q8IY17
RALLTRNGQAGGGGG

KCNK3

261

O14649
ALQGAQGGARALLGG

MAPK15

506

Q8TD08
LQRGGGFQGVGNGVR

KY

41

Q8NBH2
QLRLQGLQGSGGRGG

KIF1C

946

O43896
AGGIQFLGGLLIGAG

LHFPL6

121

Q9Y693
RGGDGINSIGGGQKV

PLOD2

76

O00469
LGLQKGQQTGGRGVL

NUTM1

656

Q86Y26
VGIRFEGPLVQQGGG

PCF11

991

O94913
GGGNLLGIIVGGAQE

MOGAT2

176

Q3SYC2
QSLVARGVGGSLGGG

ADCYAP1

106

P18509
GGQRREGGGRNIGGI

CAPNS2

26

Q96L46
EGGGRNIGGIVGGIV

CAPNS2

31

Q96L46
GGLLRGTGGQLGQTV

COQ8B

6

Q96D53
GGGRGIGAGIVRAFV

HSD17B14

16

Q9BPX1
AGIQGVSIQGGGIQG

CSTF2T

531

Q9H0L4
VSIQGGGIQGGGIQG

CSTF2T

536

Q9H0L4
GLGLGLAGRVVAGRQ

GLIS1

181

Q8NBF1
GAGLGLVLGAGFLGQ

SLC22A31

456

A6NKX4
IRQTVNRGGGGFGAG

PURB

146

Q96QR8
GVGGVRSRVGIQQGL

POLDIP3

26

Q9BY77
VLQAGAVGPARGGQG

PANK1

61

Q8TE04
VLVVGGGIAGLGAAQ

PAOX

16

Q6QHF9
LGGLGQLQSPGAGVG

MN1

706

Q10571
GNGIVGAQGPLGAGI

PDHA2

161

P29803
EVGGFLGGLEGLGQQ

FGF20

6

Q9NP95
AVRVGLLLGGGGVYG

TMCO1

11

Q9UM00
EGQGQGRGLGLVSAV

MESP1

181

Q9BRJ9
GVGVGVGAAAVGQRL

SOX1

156

O00570
LAVGGGGLLAGVVAG

SDSL

171

Q96GA7
VGGMVGQLFGGQLGQ

PLA1A

171

Q53H76
GGGGAGPVVVVRQRQ

TCF15

61

Q12870
INVGLRGLVAGGIIG

TIMMDC1

181

Q9NPL8
QGLGVPGIGATQGLR

SLC30A6

426

Q6NXT4