Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	extracellular matrix structural constituent conferring tensile strength	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	1.33e-09	46	22	5	GO:0030020
GeneOntologyMolecularFunction	extracellular matrix structural constituent	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	1.62e-06	188	22	5	GO:0005201
GeneOntologyMolecularFunction	structural molecule activity	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1 RPS9	3.13e-04	891	22	6	GO:0005198
GeneOntologyMolecularFunction	RNA polymerase II general transcription initiation factor binding	FBL HNRNPU	4.00e-04	27	22	2	GO:0001091
GeneOntologyMolecularFunction	bHLH transcription factor binding	SP1 TWIST1	7.54e-04	37	22	2	GO:0043425
GeneOntologyMolecularFunction	snRNA binding	LSM4 HNRNPU	1.78e-03	57	22	2	GO:0017069
GeneOntologyMolecularFunction	general transcription initiation factor binding	FBL HNRNPU	2.24e-03	64	22	2	GO:0140296
GeneOntologyMolecularFunction	basal RNA polymerase II transcription machinery binding	FBL HNRNPU	2.38e-03	66	22	2	GO:0001099
GeneOntologyMolecularFunction	basal transcription machinery binding	FBL HNRNPU	2.38e-03	66	22	2	GO:0001098
GeneOntologyMolecularFunction	RNA helicase activity	DDX18 DDX42	3.31e-03	78	22	2	GO:0003724
GeneOntologyMolecularFunction	rRNA binding	RRS1 RPS9	3.39e-03	79	22	2	GO:0019843
GeneOntologyMolecularFunction	ATP-dependent activity, acting on RNA	DDX18 DDX42	3.48e-03	80	22	2	GO:0008186
GeneOntologyMolecularFunction	transcription factor binding	FBL SP1 HNRNPU TWIST1	8.53e-03	753	22	4	GO:0008134
GeneOntologyMolecularFunction	transcription coregulator binding	SP1 TWIST1	1.03e-02	140	22	2	GO:0001221
GeneOntologyMolecularFunction	catalytic activity, acting on RNA	FBL DDX18 DDX42	1.04e-02	417	22	3	GO:0140098
GeneOntologyMolecularFunction	histone deacetylase binding	SP1 TWIST1	1.13e-02	147	22	2	GO:0042826
GeneOntologyBiologicalProcess	ribonucleoprotein complex biogenesis	FBL LSM4 RRS1 DDX18 RPS9 DDX42	9.28e-06	515	21	6	GO:0022613
GeneOntologyBiologicalProcess	ossification	COL5A2 FBL SP1 HNRNPU SUN1 TWIST1	1.53e-05	562	21	6	GO:0001503
GeneOntologyBiologicalProcess	collagen fibril organization	COL5A2 COL28A1 COL27A1	6.10e-05	76	21	3	GO:0030199
GeneOntologyBiologicalProcess	ribosomal small subunit biogenesis	FBL RRS1 RPS9	1.73e-04	108	21	3	GO:0042274
GeneOntologyBiologicalProcess	mRNA metabolic process	SP1 LSM4 GTPBP2 HNRNPU HNRNPR DDX42	2.32e-04	917	21	6	GO:0016071
GeneOntologyBiologicalProcess	establishment of chromosome localization	RRS1 HNRNPU SUN1	2.48e-04	122	21	3	GO:0051303
GeneOntologyBiologicalProcess	chromosome localization	RRS1 HNRNPU SUN1	2.99e-04	130	21	3	GO:0050000
GeneOntologyBiologicalProcess	nuclear-transcribed mRNA catabolic process	LSM4 GTPBP2 HNRNPU	3.13e-04	132	21	3	GO:0000956
GeneOntologyBiologicalProcess	maintenance of protein location in nucleus	HNRNPU SUN1	3.16e-04	26	21	2	GO:0051457
GeneOntologyBiologicalProcess	ribosome biogenesis	FBL RRS1 DDX18 RPS9	3.33e-04	336	21	4	GO:0042254
GeneOntologyBiologicalProcess	mRNA splicing, via spliceosome	LSM4 HNRNPU HNRNPR DDX42	4.23e-04	358	21	4	GO:0000398
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	LSM4 HNRNPU HNRNPR DDX42	4.23e-04	358	21	4	GO:0000377
GeneOntologyBiologicalProcess	RNA splicing, via transesterification reactions	LSM4 HNRNPU HNRNPR DDX42	4.41e-04	362	21	4	GO:0000375
GeneOntologyBiologicalProcess	embryonic camera-type eye morphogenesis	SP1 TWIST1	4.81e-04	32	21	2	GO:0048596
GeneOntologyBiologicalProcess	mRNA catabolic process	LSM4 GTPBP2 HNRNPU HNRNPR	4.94e-04	373	21	4	GO:0006402
GeneOntologyBiologicalProcess	RNA processing	FBL LSM4 RRS1 DDX18 HNRNPU HNRNPR DDX42	4.97e-04	1500	21	7	GO:0006396
GeneOntologyBiologicalProcess	extracellular matrix organization	COL5A2 COL28A1 OTOL1 COL27A1	5.14e-04	377	21	4	GO:0030198
GeneOntologyBiologicalProcess	extracellular structure organization	COL5A2 COL28A1 OTOL1 COL27A1	5.19e-04	378	21	4	GO:0043062
GeneOntologyBiologicalProcess	external encapsulating structure organization	COL5A2 COL28A1 OTOL1 COL27A1	5.24e-04	379	21	4	GO:0045229
GeneOntologyBiologicalProcess	embryonic eye morphogenesis	SP1 TWIST1	6.79e-04	38	21	2	GO:0048048
GeneOntologyBiologicalProcess	RNA catabolic process	LSM4 GTPBP2 HNRNPU HNRNPR	8.56e-04	432	21	4	GO:0006401
GeneOntologyBiologicalProcess	embryonic camera-type eye development	SP1 TWIST1	9.52e-04	45	21	2	GO:0031076
GeneOntologyBiologicalProcess	maintenance of protein localization in organelle	HNRNPU SUN1	1.04e-03	47	21	2	GO:0072595
GeneOntologyBiologicalProcess	eye morphogenesis	COL5A2 SP1 TWIST1	1.11e-03	204	21	3	GO:0048592
GeneOntologyBiologicalProcess	nucleic acid catabolic process	LSM4 GTPBP2 HNRNPU HNRNPR	1.12e-03	464	21	4	GO:0141188
GeneOntologyBiologicalProcess	RNA splicing	LSM4 HNRNPU HNRNPR DDX42	1.49e-03	502	21	4	GO:0008380
GeneOntologyBiologicalProcess	rRNA processing	FBL RRS1 DDX18	1.57e-03	230	21	3	GO:0006364
GeneOntologyBiologicalProcess	protein-RNA complex assembly	LSM4 RRS1 DDX42	1.86e-03	244	21	3	GO:0022618
GeneOntologyBiologicalProcess	mitotic metaphase chromosome alignment	RRS1 HNRNPU	1.98e-03	65	21	2	GO:0007080
GeneOntologyBiologicalProcess	protein-RNA complex organization	LSM4 RRS1 DDX42	2.08e-03	254	21	3	GO:0071826
GeneOntologyBiologicalProcess	mRNA processing	LSM4 HNRNPU HNRNPR DDX42	2.10e-03	551	21	4	GO:0006397
GeneOntologyBiologicalProcess	ribosomal large subunit biogenesis	RRS1 DDX18	2.48e-03	73	21	2	GO:0042273
GeneOntologyBiologicalProcess	rRNA metabolic process	FBL RRS1 DDX18	2.61e-03	275	21	3	GO:0016072
GeneOntologyBiologicalProcess	maintenance of protein location in cell	HNRNPU SUN1	2.69e-03	76	21	2	GO:0032507
GeneOntologyCellularComponent	collagen trimer	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	2.93e-08	88	22	5	GO:0005581
GeneOntologyCellularComponent	fibrillar collagen trimer	COL5A2 COL28A1 COL27A1	2.21e-07	12	22	3	GO:0005583
GeneOntologyCellularComponent	banded collagen fibril	COL5A2 COL28A1 COL27A1	2.21e-07	12	22	3	GO:0098643
GeneOntologyCellularComponent	complex of collagen trimers	COL5A2 COL28A1 COL27A1	1.33e-06	21	22	3	GO:0098644
GeneOntologyCellularComponent	collagen type V trimer	COL5A2 COL28A1	6.34e-06	4	22	2	GO:0005588
GeneOntologyCellularComponent	spliceosomal complex	LSM4 HNRNPU HNRNPR DDX42	6.88e-05	215	22	4	GO:0005681
GeneOntologyCellularComponent	ribonucleoprotein complex	FBL LSM4 RRS1 HNRNPU RPS9 HNRNPR DDX42	1.56e-04	1194	22	7	GO:1990904
GeneOntologyCellularComponent	collagen-containing extracellular matrix	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	1.89e-04	530	22	5	GO:0062023
GeneOntologyCellularComponent	preribosome	FBL RRS1 RPS9	2.26e-04	114	22	3	GO:0030684
GeneOntologyCellularComponent	endoplasmic reticulum lumen	COL5A2 COL21A1 COL28A1 COL27A1	3.65e-04	332	22	4	GO:0005788
GeneOntologyCellularComponent	extracellular matrix	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	5.06e-04	656	22	5	GO:0031012
GeneOntologyCellularComponent	external encapsulating structure	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	5.13e-04	658	22	5	GO:0030312
GeneOntologyCellularComponent	nuclear protein-containing complex	LSM4 HNRNPU SUN1 HNRNPR DDX42 BCL9	2.41e-03	1377	22	6	GO:0140513
GeneOntologyCellularComponent	small-subunit processome	FBL RPS9	2.87e-03	76	22	2	GO:0032040
GeneOntologyCellularComponent	Cajal body	FBL DDX42	3.50e-03	84	22	2	GO:0015030
GeneOntologyCellularComponent	catalytic step 2 spliceosome	HNRNPU HNRNPR	4.63e-03	97	22	2	GO:0071013
GeneOntologyCellularComponent	U2-type spliceosomal complex	LSM4 DDX42	4.63e-03	97	22	2	GO:0005684
Domain	Collagen	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	4.29e-08	85	22	5	PF01391
Domain	Collagen	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	4.29e-08	85	22	5	IPR008160
Domain	Fib_collagen_C	COL5A2 COL27A1	7.24e-05	11	22	2	IPR000885
Domain	NC1_FIB	COL5A2 COL27A1	7.24e-05	11	22	2	PS51461
Domain	Fib_collagen_C	COL5A2 COL27A1	7.24e-05	11	22	2	PD002078
Domain	COLFI	COL5A2 COL27A1	7.24e-05	11	22	2	SM00038
Domain	COLFI	COL5A2 COL27A1	7.24e-05	11	22	2	PF01410
Domain	TSPN	COL21A1 COL27A1	3.30e-04	23	22	2	SM00210
Domain	DEAD_ATP_HELICASE	DDX18 DDX42	6.03e-04	31	22	2	PS00039
Domain	RNA-helicase_DEAD-box_CS	DDX18 DDX42	6.84e-04	33	22	2	IPR000629
Domain	RNA_helicase_DEAD_Q_motif	DDX18 DDX42	8.60e-04	37	22	2	IPR014014
Domain	Q_MOTIF	DDX18 DDX42	8.60e-04	37	22	2	PS51195
Domain	VWA	COL21A1 COL28A1	1.96e-03	56	22	2	PF00092
Domain	ConA-like_dom	COL21A1 COL27A1 HNRNPU	2.08e-03	219	22	3	IPR013320
Domain	Laminin_G	COL21A1 COL27A1	2.10e-03	58	22	2	IPR001791
Domain	DEAD/DEAH_box_helicase_dom	DDX18 DDX42	3.31e-03	73	22	2	IPR011545
Domain	DEAD	DDX18 DDX42	3.31e-03	73	22	2	PF00270
Domain	-	COL21A1 COL28A1	3.40e-03	74	22	2	3.40.50.410
Domain	VWFA	COL21A1 COL28A1	4.15e-03	82	22	2	PS50234
Domain	VWA	COL21A1 COL28A1	4.36e-03	84	22	2	SM00327
Domain	VWF_A	COL21A1 COL28A1	6.00e-03	99	22	2	IPR002035
Domain	Helicase_C	DDX18 DDX42	6.97e-03	107	22	2	PF00271
Domain	HELICc	DDX18 DDX42	6.97e-03	107	22	2	SM00490
Domain	Helicase_C	DDX18 DDX42	7.10e-03	108	22	2	IPR001650
Domain	HELICASE_CTER	DDX18 DDX42	7.22e-03	109	22	2	PS51194
Domain	HELICASE_ATP_BIND_1	DDX18 DDX42	7.22e-03	109	22	2	PS51192
Domain	DEXDc	DDX18 DDX42	7.22e-03	109	22	2	SM00487
Domain	Helicase_ATP-bd	DDX18 DDX42	7.35e-03	110	22	2	IPR014001
Domain	-	GTPBP2 DDX18 HNRNPU DDX42	1.04e-02	746	22	4	3.40.50.300
Domain	P-loop_NTPase	GTPBP2 DDX18 HNRNPU DDX42	1.61e-02	848	22	4	IPR027417
Pathway	REACTOME_COLLAGEN_CHAIN_TRIMERIZATION	COL5A2 COL21A1 COL28A1 COL27A1	1.46e-07	44	16	4	M27812
Pathway	REACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES	COL5A2 COL21A1 COL28A1 COL27A1	8.12e-07	67	16	4	M26999
Pathway	REACTOME_COLLAGEN_FORMATION	COL5A2 COL21A1 COL28A1 COL27A1	2.67e-06	90	16	4	M631
Pathway	REACTOME_METABOLISM_OF_RNA	FBL LSM4 HNRNPU RPS9 HNRNPR DDX42	3.60e-05	612	16	6	MM15547
Pathway	REACTOME_MRNA_SPLICING	LSM4 HNRNPU HNRNPR DDX42	6.38e-05	201	16	4	MM15411
Pathway	REACTOME_MRNA_SPLICING	LSM4 HNRNPU HNRNPR DDX42	7.85e-05	212	16	4	M14033
Pathway	REACTOME_METABOLISM_OF_RNA	FBL LSM4 HNRNPU RPS9 HNRNPR DDX42	9.24e-05	724	16	6	M16843
Pathway	WP_MRNA_PROCESSING	FBL LSM4 HNRNPU RPS9 HNRNPR	1.07e-04	451	16	5	MM15946
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	LSM4 HNRNPU HNRNPR DDX42	2.20e-04	277	16	4	MM15414
Pathway	REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA	LSM4 HNRNPU HNRNPR DDX42	2.39e-04	283	16	4	M13087
Pathway	REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION	COL5A2 COL21A1 COL28A1 COL27A1	2.99e-04	300	16	4	M610
Pathway	KEGG_SPLICEOSOME	LSM4 HNRNPU DDX42	3.67e-04	127	16	3	M2044
Pathway	REACTOME_MET_ACTIVATES_PTK2_SIGNALING	COL5A2 COL27A1	5.16e-04	30	16	2	M27772
Pathway	PID_HIF2PATHWAY	SP1 TWIST1	6.63e-04	34	16	2	M44
Pathway	REACTOME_COLLAGEN_CHAIN_TRIMERIZATION	COL5A2 COL28A1	9.65e-04	41	16	2	MM15538
Pathway	REACTOME_MET_PROMOTES_CELL_MOTILITY	COL5A2 COL27A1	9.65e-04	41	16	2	M27778
Pathway	REACTOME_RRNA_MODIFICATION_IN_THE_NUCLEUS_AND_CYTOSOL	FBL RPS9	2.06e-03	60	16	2	M27613
Pathway	REACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES	COL5A2 COL27A1	2.13e-03	61	16	2	M27103
Pathway	REACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES	COL5A2 COL28A1	2.13e-03	61	16	2	MM14637
Pathway	REACTOME_COLLAGEN_FORMATION	COL5A2 COL28A1	3.28e-03	76	16	2	MM14573
Pathway	REACTOME_SIGNALING_BY_MET	COL5A2 COL27A1	3.54e-03	79	16	2	M27643
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	FAM120C FBL LSM4 RRS1 DDX18 HNRNPU HNRNPR DDX42	1.95e-08	807	22	8	22681889
Pubmed	Nuclear Functions of Nucleolin through Global Proteomics and Interactomic Approaches.	RRS1 DDX18 HNRNPU RPS9 HNRNPR	2.92e-08	145	22	5	27049334
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	FBL RRS1 DDX18 HNRNPU SUN1 RPS9 HNRNPR DDX42	9.33e-08	989	22	8	36424410
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	FBL RRS1 DDX18 HNRNPU SUN1 RPS9 HNRNPR	1.05e-07	652	22	7	31180492
Pubmed	Identifying biological pathways that underlie primordial short stature using network analysis.	FBL RRS1 DDX18 HNRNPU SUN1 RPS9 HNRNPR DDX42	1.22e-07	1024	22	8	24711643
Pubmed	Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.	FBL LSM4 HNRNPU RPS9 HNRNPR DDX42	1.23e-07	390	22	6	17643375
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	FBL LSM4 RRS1 DDX18 HNRNPU RPS9 HNRNPR	1.93e-07	713	22	7	29802200
Pubmed	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	FAM120C FBL RRS1 HNRNPU RPS9 HNRNPR DDX42	1.95e-07	714	22	7	28302793
Pubmed	TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	2.18e-07	430	22	6	38172120
Pubmed	Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.	FBL LSM4 RRS1 DDX18 HNRNPU RPS9 HNRNPR	2.28e-07	731	22	7	29298432
Pubmed	STRIP2 is regulated by the transcription factor Sp1 and promotes lung adenocarcinoma progression via activating the PI3K/AKT/mTOR/MYC signaling pathway.	SP1 STRIP2	3.82e-07	2	22	2	39191354
Pubmed	Disruption of the lamin A and matrin-3 interaction by myopathic LMNA mutations.	FBL DDX18 HNRNPU HNRNPR	3.84e-07	96	22	4	25948554
Pubmed	Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.	FBL LSM4 HNRNPU RPS9 HNRNPR	5.33e-07	260	22	5	36199071
Pubmed	Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR DDX42	6.14e-07	847	22	7	35850772
Pubmed	Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy.	FBL HNRNPU RPS9 HNRNPR	6.39e-07	109	22	4	29511296
Pubmed	Nuclear organization of nucleotide excision repair is mediated by RING1B dependent H2A-ubiquitylation.	FBL DDX18 HNRNPU RPS9	7.13e-07	112	22	4	28416769
Pubmed	A COFRADIC protocol to study protein ubiquitination.	FBL DDX18 HNRNPU HNRNPR	1.46e-06	134	22	4	24816145
Pubmed	Molecular composition of IMP1 ribonucleoprotein granules.	HNRNPU RPS9 HNRNPR	1.55e-06	36	22	3	17289661
Pubmed	The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	1.58e-06	604	22	6	37616343
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	FBL DDX18 HNRNPU RPS9 HNRNPR DDX42	1.59e-06	605	22	6	28977666
Pubmed	HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.	RRS1 HNRNPU HNRNPR DDX42	2.17e-06	148	22	4	32538781
Pubmed	A novel nuclear structure containing the survival of motor neurons protein.	FBL HNRNPU	2.29e-06	4	22	2	8670859
Pubmed	SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	2.52e-06	655	22	6	35819319
Pubmed	Systematic and quantitative assessment of the ubiquitin-modified proteome.	FBL DDX18 HNRNPU HNRNPR	2.81e-06	158	22	4	21906983
Pubmed	Linking nuclear matrix-localized PIAS1 to chromatin SUMOylation via direct binding of histones H3 and H2A.Z.	FBL DDX18 HNRNPU HNRNPR	2.89e-06	159	22	4	34537242
Pubmed	A protein-RNA interaction atlas of the ribosome biogenesis factor AATF.	FBL DDX18 RPS9 HNRNPR	3.11e-06	162	22	4	31363146
Pubmed	A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.	FBL DDX18 HNRNPU HNRNPR	3.11e-06	162	22	4	21890473
Pubmed	GW182 is critical for the stability of GW bodies expressed during the cell cycle and cell proliferation.	FBL LSM4	3.82e-06	5	22	2	15494374
Pubmed	Beads-free protein immunoprecipitation for a mass spectrometry-based interactome and posttranslational modifications analysis.	RRS1 DDX18 HNRNPU RPS9	3.94e-06	172	22	4	26336360
Pubmed	Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.	FBL LSM4 DDX18 HNRNPU HNRNPR DDX42	4.44e-06	723	22	6	34133714
Pubmed	Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level.	FBL DDX18 HNRNPU HNRNPR	4.72e-06	180	22	4	21139048
Pubmed	Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.	FBL DDX18 HNRNPU RPS9 HNRNPR	5.64e-06	421	22	5	34650049
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	5.86e-06	759	22	6	35915203
Pubmed	Proteomic and functional analysis of Argonaute-containing mRNA-protein complexes in human cells.	FBL DDX18 HNRNPU	6.29e-06	57	22	3	17932509
Pubmed	Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.	FBL RRS1 HNRNPU RPS9 HNRNPR	7.06e-06	441	22	5	31239290
Pubmed	Comparative Interactomes of VRK1 and VRK3 with Their Distinct Roles in the Cell Cycle of Liver Cancer.	DDX18 HNRNPU RPS9 HNRNPR	7.89e-06	205	22	4	28927264
Pubmed	Interactomic analysis of REST/NRSF and implications of its functional links with the transcription suppressor TRIM28 during neuronal differentiation.	FBL HNRNPU RPS9 HNRNPR	7.89e-06	205	22	4	27976729
Pubmed	SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response.	FBL DDX18 HNRNPU RPS9 HNRNPR	8.94e-06	463	22	5	34901782
Pubmed	The Nuclear SUMO-Targeted Ubiquitin Quality Control Network Regulates the Dynamics of Cytoplasmic Stress Granules.	FBL DDX18 HNRNPR	9.35e-06	65	22	3	32521226
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	FBL SP1 LSM4 DDX18 HNRNPU HNRNPR DDX42	1.01e-05	1294	22	7	30804502
Pubmed	Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.	LSM4 HNRNPU HNRNPR BCL9	1.04e-05	220	22	4	24550385
Pubmed	LINKIN, a new transmembrane protein necessary for cell adhesion.	FBL SP1 HNRNPU RPS9 HNRNPR	1.06e-05	480	22	5	25437307
Pubmed	Identification of a heterogeneous nuclear ribonucleoprotein-recognition region in the HIV Rev protein.	HNRNPU HNRNPR	1.07e-05	8	22	2	19808671
Pubmed	Global analysis of TDP-43 interacting proteins reveals strong association with RNA splicing and translation machinery.	FBL HNRNPU RPS9 HNRNPR	1.10e-05	223	22	4	20020773
Pubmed	Proteomic analysis of α4β1 integrin adhesion complexes reveals α-subunit-dependent protein recruitment.	FBL HNRNPU RPS9 HNRNPR DDX42	1.19e-05	491	22	5	22623428
Pubmed	UBE2O promotes lipid metabolic reprogramming and liver cancer progression by mediating HADHA ubiquitination.	FAM120C FBL LSM4 DDX18 DDX42	1.19e-05	491	22	5	36273042
Pubmed	Fibril treatment changes protein interactions of tau and α-synuclein in human neurons.	LSM4 DDX18 HNRNPU HNRNPR DDX42	1.27e-05	498	22	5	36634849
Pubmed	Dose-dependent Smad1, Smad5 and Smad8 signaling in the early mouse embryo.	SP1 TWIST1	1.37e-05	9	22	2	16765933
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR DDX42	1.89e-05	1425	22	7	30948266
Pubmed	Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.	ZNF608 LSM4 BCL9	1.95e-05	83	22	3	28794006
Pubmed	RNF125 attenuates hepatocellular carcinoma progression by downregulating SRSF1-ERK pathway.	HNRNPU HNRNPR	2.09e-05	11	22	2	37142680
Pubmed	In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.	FBL LSM4 COL28A1 HNRNPU RPS9 HNRNPR	2.37e-05	971	22	6	33306668
Pubmed	Interactome mapping defines BRG1, a component of the SWI/SNF chromatin remodeling complex, as a new partner of the transcriptional regulator CTCF.	FBL HNRNPU RPS9	2.49e-05	90	22	3	30459231
Pubmed	USP53 plays an antitumor role in hepatocellular carcinoma through deubiquitination of cytochrome c.	FBL DDX18 DDX42	2.49e-05	90	22	3	35654790
Pubmed	KAP1 Recruitment of the 7SK snRNP Complex to Promoters Enables Transcription Elongation by RNA Polymerase II.	LSM4 DDX18 HNRNPU HNRNPR	2.72e-05	281	22	4	26725010
Pubmed	Comprehensive Proteomic Analysis of PGC7-Interacting Proteins.	FBL HNRNPU RPS9 HNRNPR	2.95e-05	287	22	4	28712289
Pubmed	Nucleolar localization of DGCR8 and identification of eleven DGCR8-associated proteins.	HNRNPU HNRNPR	2.97e-05	13	22	2	17765891
Pubmed	Systematic Determination of Human Cyclin Dependent Kinase (CDK)-9 Interactome Identifies Novel Functions in RNA Splicing Mediated by the DEAD Box (DDX)-5/17 RNA Helicases.	RRS1 HNRNPU RPS9 HNRNPR	3.29e-05	295	22	4	26209609
Pubmed	Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA sequencing.	ZNF608 HNRNPU	3.46e-05	14	22	2	21873192
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	FBL DDX18 HNRNPU RPS9 HNRNPR	3.49e-05	615	22	5	31048545
Pubmed	CHFR regulates chemoresistance in triple-negative breast cancer through destabilizing ZEB1.	HNRNPU RPS9 HNRNPR	3.52e-05	101	22	3	34462429
Pubmed	ALS/FTD-causing mutation in cyclin F causes the dysregulation of SFPQ.	FBL DDX18 HNRNPU RPS9 HNRNPR	3.74e-05	624	22	5	33729478
Pubmed	Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.	FBL DDX18 HNRNPU RPS9 HNRNPR	3.80e-05	626	22	5	33644029
Pubmed	Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.	FBL DDX18 HNRNPU	3.95e-05	105	22	3	22505724
Pubmed	Interactome analysis of AMP-activated protein kinase (AMPK)-α1 and -β1 in INS-1 pancreatic beta-cells by affinity purification-mass spectrometry.	FBL RPS9 HNRNPR	3.95e-05	105	22	3	24625528
Pubmed	Zbtb7b engages the long noncoding RNA Blnc1 to drive brown and beige fat development and thermogenesis.	HNRNPU HNRNPR	3.99e-05	15	22	2	28784777
Pubmed	Large-scale analysis of the human ubiquitin-related proteome.	FBL DDX18 HNRNPU HNRNPR	4.14e-05	313	22	4	16196087
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	RRS1 DDX18 HNRNPU RPS9 HNRNPR DDX42	4.35e-05	1082	22	6	38697112
Pubmed	A receptor for activated C kinase is part of messenger ribonucleoprotein complexes associated with polyA-mRNAs in neurons.	HNRNPU HNRNPR	5.16e-05	17	22	2	12388589
Pubmed	Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes.	HNRNPU HNRNPR DDX42	5.18e-05	115	22	3	17332742
Pubmed	PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.	FBL RRS1 DDX18 HNRNPU HNRNPR	5.55e-05	678	22	5	30209976
Pubmed	PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.	FBL HNRNPU RPS9 HNRNPR	5.71e-05	340	22	4	24332808
Pubmed	Biochemical and phosphoproteomic analysis of the helix-loop-helix protein E47.	FBL TWIST1 HNRNPR	6.03e-05	121	22	3	22354994
Pubmed	Arginine methylation of SARS-Cov-2 nucleocapsid protein regulates RNA binding, its ability to suppress stress granule formation, and viral replication.	FBL HNRNPU HNRNPR	6.03e-05	121	22	3	34029587
Pubmed	The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.	FBL LSM4 DDX18 HNRNPU RPS9 HNRNPR	6.19e-05	1153	22	6	29845934
Pubmed	Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.	FBL HNRNPU HNRNPR	6.48e-05	124	22	3	23000965
Pubmed	A catalogue of putative HIV-1 protease host cell substrates.	RRS1 DDX18 HNRNPU	6.48e-05	124	22	3	22944692
Pubmed	Proteomic analysis of integrin-associated complexes identifies RCC2 as a dual regulator of Rac1 and Arf6.	FBL DDX18 HNRNPU RPS9 HNRNPR	6.76e-05	707	22	5	19738201
Pubmed	BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.	FBL LSM4 DDX18 HNRNPU HNRNPR	6.95e-05	711	22	5	33022573
Pubmed	The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.	ZNF608 FBL HNRNPU SUN1 HNRNPR DDX42	7.84e-05	1203	22	6	29180619
Pubmed	Global identification of modular cullin-RING ligase substrates.	FBL DDX18 HNRNPU	8.16e-05	134	22	3	21963094
Pubmed	E3 ubiquitin ligase RNF123 targets lamin B1 and lamin-binding proteins.	FAM120C COL28A1 HNRNPU RPS9 HNRNPR	8.18e-05	736	22	5	29676528
Pubmed	Characterization of the Extracellular Matrix of Normal and Diseased Tissues Using Proteomics.	COL5A2 COL21A1 COL28A1	8.34e-05	135	22	3	28675934
Pubmed	Interactome analysis of the human Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (hMTr1) protein.	HNRNPU RPS9 HNRNPR	8.91e-05	138	22	3	30320910
Pubmed	Deubiquitinating enzyme PSMD14 promotes tumor metastasis through stabilizing SNAIL in human esophageal squamous cell carcinoma.	FBL HNRNPU RPS9 HNRNPR	9.05e-05	383	22	4	29331416
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	ZNF608 FBL DDX18 HNRNPU RPS9 HNRNPR	9.56e-05	1247	22	6	27684187
Pubmed	Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	9.99e-05	1257	22	6	36526897
Pubmed	β-dystroglycan is regulated by a balance between WWP1-mediated degradation and protection from WWP1 by dystrophin and utrophin.	FBL HNRNPR	1.05e-04	24	22	2	29635000
Pubmed	The PRMT5/WDR77 complex regulates alternative splicing through ZNF326 in breast cancer.	FBL LSM4 HNRNPR	1.07e-04	147	22	3	28977470
Pubmed	Identification of intracellular proteins associated with the EBV-encoded nuclear antigen 5 using an efficient TAP procedure and FT-ICR mass spectrometry.	HNRNPU RPS9 HNRNPR	1.16e-04	151	22	3	18457437
Pubmed	Human ISG15 conjugation targets both IFN-induced and constitutively expressed proteins functioning in diverse cellular pathways.	FAM120C HNRNPU DDX42	1.19e-04	152	22	3	16009940
Pubmed	Extracellular matrix signatures of human primary metastatic colon cancers and their metastases to liver.	COL5A2 COL21A1 COL28A1	1.21e-04	153	22	3	25037231
Pubmed	Nucleolar proteome dynamics.	FBL RRS1 RPS9 HNRNPR	1.28e-04	419	22	4	15635413
Pubmed	RC3H1 post-transcriptionally regulates A20 mRNA and modulates the activity of the IKK/NF-κB pathway.	FBL HNRNPU HNRNPR	1.28e-04	156	22	3	26170170
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	1.30e-04	1318	22	6	30463901
Pubmed	Interactome Analysis of the Nucleocapsid Protein of SARS-CoV-2 Virus.	FBL RRS1 DDX18	1.35e-04	159	22	3	34578187
Pubmed	Multiple myeloma-associated chromosomal translocation activates orphan snoRNA ACA11 to suppress oxidative stress.	DDX18 HNRNPU HNRNPR	1.35e-04	159	22	3	22751105
Pubmed	Integrative analysis of the ubiquitin proteome isolated using Tandem Ubiquitin Binding Entities (TUBEs).	FBL DDX18	1.43e-04	28	22	2	22178446
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	1.50e-04	1353	22	6	29467282
Pubmed	Identification of novel transcription-regulating genes expressed during murine molar development.	LSM4 HNRNPR	1.53e-04	29	22	2	22639370
Interaction	CUL7 interactions	FBL RRS1 GTPBP2 COL27A1 DDX18 HNRNPU RPS9 HNRNPR DDX42	1.17e-07	845	22	9	int:CUL7
Interaction	OBSL1 interactions	FBL RRS1 DDX18 HNRNPU SUN1 RPS9 TWIST1 HNRNPR DDX42	2.04e-07	902	22	9	int:OBSL1
Interaction	RPS19 interactions	FBL SP1 RRS1 DDX18 HNRNPU RPS9 HNRNPR DDX42	2.11e-07	639	22	8	int:RPS19
Interaction	SNU13 interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	4.68e-07	285	22	6	int:SNU13
Interaction	MYCN interactions	FAM120C FBL SP1 LSM4 RRS1 GTPBP2 DDX18 HNRNPU RPS9 HNRNPR	6.32e-07	1373	22	10	int:MYCN
Interaction	RRP15 interactions	FBL RRS1 DDX18 HNRNPU RPS9	6.37e-07	157	22	5	int:RRP15
Interaction	EBNA1BP2 interactions	FBL RRS1 DDX18 HNRNPU RPS9 TWIST1	9.90e-07	324	22	6	int:EBNA1BP2
Interaction	DDX18 interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	1.18e-06	334	22	6	int:DDX18
Interaction	ALG13 interactions	ZNF608 FAM120C FBL HNRNPR BCL9	1.36e-06	183	22	5	int:ALG13
Interaction	RRS1 interactions	FBL RRS1 DDX18 HNRNPU RPS9 TWIST1	1.43e-06	345	22	6	int:RRS1
Interaction	ZC3H18 interactions	FBL SP1 LSM4 RRS1 DDX18 HNRNPU RPS9 HNRNPR	2.31e-06	877	22	8	int:ZC3H18
Interaction	AATF interactions	FBL SP1 DDX18 HNRNPU RPS9 HNRNPR	2.35e-06	376	22	6	int:AATF
Interaction	FBL interactions	FAM120C FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	3.51e-06	639	22	7	int:FBL
Interaction	PRC1 interactions	FAM120C FBL RRS1 DDX18 HNRNPU SUN1 RPS9 HNRNPR	5.01e-06	973	22	8	int:PRC1
Interaction	GLYR1 interactions	FBL RRS1 DDX18 HNRNPU RPS9	5.02e-06	239	22	5	int:GLYR1
Interaction	SNRNP70 interactions	FBL LSM4 RRS1 GTPBP2 DDX18 HNRNPU RPS9 HNRNPR	5.44e-06	984	22	8	int:SNRNP70
Interaction	PRPF40A interactions	RRS1 DDX18 HNRNPU RPS9 HNRNPR DDX42	6.27e-06	446	22	6	int:PRPF40A
Interaction	SMN2 interactions	FBL LSM4 HNRNPU HNRNPR	6.57e-06	114	22	4	int:SMN2
Interaction	LSM14A interactions	FAM120C FBL LSM4 HNRNPU HNRNPR	7.57e-06	260	22	5	int:LSM14A
Interaction	SYNCRIP interactions	FAM120C FBL LSM4 HNRNPU RPS9 HNRNPR DDX42	7.77e-06	721	22	7	int:SYNCRIP
Interaction	HNRNPU interactions	FAM120C FBL RRS1 GTPBP2 DDX18 HNRNPU RPS9 HNRNPR	7.90e-06	1035	22	8	int:HNRNPU
Interaction	RBM39 interactions	FAM120C FBL LSM4 RRS1 HNRNPU RPS9 HNRNPR DDX42	8.30e-06	1042	22	8	int:RBM39
Interaction	MTF1 interactions	FBL DDX18 HNRNPU RPS9	8.88e-06	123	22	4	int:MTF1
Interaction	DDX23 interactions	LSM4 RRS1 DDX18 HNRNPU HNRNPR DDX42	9.55e-06	480	22	6	int:DDX23
Interaction	REST interactions	FBL SP1 HNRNPU RPS9 HNRNPR	9.76e-06	274	22	5	int:REST
Interaction	CIT interactions	FBL LSM4 RRS1 DDX18 HNRNPU SUN1 RPS9 HNRNPR DDX42	1.06e-05	1450	22	9	int:CIT
Interaction	CHD3 interactions	FBL DDX18 HNRNPU RPS9 TWIST1 HNRNPR DDX42	1.07e-05	757	22	7	int:CHD3
Interaction	WDR5 interactions	ZNF608 FBL SP1 LSM4 DDX18 HNRNPU TWIST1 HNRNPR	1.24e-05	1101	22	8	int:WDR5
Interaction	BTRC interactions	FBL SP1 LSM4 HNRNPU RPS9 TWIST1 HNRNPR	1.24e-05	775	22	7	int:BTRC
Interaction	BMP4 interactions	FBL DDX18 HNRNPU RPS9	1.32e-05	136	22	4	int:BMP4
Interaction	RPS9 interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	1.42e-05	515	22	6	int:RPS9
Interaction	NCL interactions	FBL SP1 RRS1 DDX18 HNRNPU RPS9 HNRNPR	1.51e-05	798	22	7	int:NCL
Interaction	BRIX1 interactions	FBL RRS1 DDX18 HNRNPU RPS9	1.51e-05	300	22	5	int:BRIX1
Interaction	DDX56 interactions	FBL RRS1 DDX18 RPS9 DDX42	1.61e-05	304	22	5	int:DDX56
Interaction	DOT1L interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR DDX42	1.62e-05	807	22	7	int:DOT1L
Interaction	MRPS31 interactions	FBL RRS1 HNRNPU RPS9 HNRNPR	1.77e-05	310	22	5	int:MRPS31
Interaction	HNRNPR interactions	FBL LSM4 DDX18 HNRNPU RPS9 HNRNPR	1.79e-05	536	22	6	int:HNRNPR
Interaction	RRP1B interactions	FBL RRS1 DDX18 HNRNPU TWIST1	1.88e-05	314	22	5	int:RRP1B
Interaction	SF3B1 interactions	LSM4 RRS1 DDX18 HNRNPU HNRNPR DDX42	2.55e-05	571	22	6	int:SF3B1
Interaction	MPHOSPH10 interactions	FBL RRS1 DDX18 RPS9	3.48e-05	174	22	4	int:MPHOSPH10
Interaction	RPL32 interactions	FBL LSM4 RRS1 HNRNPU RPS9	3.72e-05	362	22	5	int:RPL32
Interaction	MECP2 interactions	FBL SP1 RRS1 DDX18 HNRNPU RPS9 HNRNPR DDX42	3.86e-05	1287	22	8	int:MECP2
Interaction	GNL3 interactions	FBL SP1 RRS1 DDX18 HNRNPU	4.03e-05	368	22	5	int:GNL3
Interaction	PML interactions	ZNF608 SP1 RRS1 HNRNPU RPS9 HNRNPR DDX42	4.12e-05	933	22	7	int:PML
Interaction	NIP7 interactions	FBL RRS1 DDX18 HNRNPU	4.23e-05	183	22	4	int:NIP7
Interaction	CHD4 interactions	FBL DDX18 HNRNPU RPS9 TWIST1 HNRNPR DDX42	4.27e-05	938	22	7	int:CHD4
Interaction	MIDN interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	4.28e-05	626	22	6	int:MIDN
Interaction	LYAR interactions	FBL RRS1 DDX18 HNRNPU RPS9	4.30e-05	373	22	5	int:LYAR
Interaction	KRR1 interactions	FBL RRS1 DDX18 HNRNPU RPS9	4.63e-05	379	22	5	int:KRR1
Interaction	NFIA interactions	ZNF608 RRS1 HNRNPU BCL9	4.70e-05	188	22	4	int:NFIA
Interaction	SNRNP40 interactions	ZNF608 FBL LSM4 RRS1 DDX18 BCL9	4.71e-05	637	22	6	int:SNRNP40
Interaction	GNL2 interactions	FBL DDX18 HNRNPU RPS9 TWIST1	5.06e-05	386	22	5	int:GNL2
Interaction	MYOD1 interactions	ZNF608 SP1 TWIST1 BCL9	5.32e-05	194	22	4	int:MYOD1
Interaction	RPS2 interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	5.60e-05	657	22	6	int:RPS2
Interaction	PHIP interactions	ZNF608 FAM120C FBL TWIST1	5.64e-05	197	22	4	int:PHIP
Interaction	NSRP1 interactions	HNRNPU RPS9 HNRNPR DDX42	5.64e-05	197	22	4	int:NSRP1
Interaction	RPL9 interactions	FBL RRS1 DDX18 HNRNPU RPS9	5.85e-05	398	22	5	int:RPL9
Interaction	RC3H2 interactions	FAM120C FBL RRS1 DDX18 HNRNPU HNRNPR	6.09e-05	667	22	6	int:RC3H2
Interaction	AR interactions	ZNF608 SP1 HNRNPU RPS9 HNRNPR DDX42 BCL9	6.09e-05	992	22	7	int:AR
Interaction	TRIM66 interactions	ZNF608 FAM120C FBL GTPBP2	6.59e-05	205	22	4	int:TRIM66
Interaction	RC3H1 interactions	FAM120C FBL RRS1 DDX18 HNRNPU HNRNPR	6.62e-05	677	22	6	int:RC3H1
Interaction	RNF113A interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	7.47e-05	692	22	6	int:RNF113A
Interaction	RNF4 interactions	ZNF608 FBL SP1 DDX18 HNRNPU SUN1 HNRNPR DDX42	7.48e-05	1412	22	8	int:RNF4
Interaction	MEN1 interactions	ZNF608 FAM120C FBL RRS1 DDX18 HNRNPR DDX42	7.69e-05	1029	22	7	int:MEN1
Interaction	FTSJ3 interactions	FBL RRS1 HNRNPU RPS9 TWIST1	7.71e-05	422	22	5	int:FTSJ3
Interaction	KIF23 interactions	FBL RRS1 DDX18 HNRNPU RPS9 TWIST1 HNRNPR	7.78e-05	1031	22	7	int:KIF23
Interaction	SOX2 interactions	ZNF608 FBL LSM4 DDX18 HNRNPU TWIST1 HNRNPR BCL9	7.87e-05	1422	22	8	int:SOX2
Interaction	SRP9 interactions	DDX18 HNRNPU RPS9 HNRNPR DDX42	8.16e-05	427	22	5	int:SRP9
Interaction	EED interactions	FBL RRS1 DDX18 HNRNPU SUN1 RPS9 HNRNPR DDX42	8.81e-05	1445	22	8	int:EED
Interaction	RBM19 interactions	FBL RRS1 RPS9 TWIST1	8.82e-05	221	22	4	int:RBM19
Interaction	PIN4 interactions	FBL HNRNPU DDX42	9.12e-05	81	22	3	int:PIN4
Interaction	ERG interactions	ZNF608 FBL HNRNPU BCL9	9.13e-05	223	22	4	int:ERG
Interaction	DDX21 interactions	FBL RRS1 DDX18 HNRNPU RPS9 HNRNPR	9.16e-05	718	22	6	int:DDX21
Interaction	PABPC4 interactions	FAM120C FBL HNRNPU RPS9 HNRNPR	9.60e-05	442	22	5	int:PABPC4
Interaction	GTPBP4 interactions	FBL RRS1 DDX18 HNRNPU TWIST1	9.70e-05	443	22	5	int:GTPBP4
Interaction	RPL18A interactions	FBL RRS1 DDX18 HNRNPU RPS9	1.01e-04	447	22	5	int:RPL18A
Interaction	UTP14A interactions	FBL DDX18 HNRNPU TWIST1	1.03e-04	230	22	4	int:UTP14A
Interaction	TRIM31 interactions	FBL DDX18 HNRNPU RPS9 HNRNPR	1.09e-04	454	22	5	int:TRIM31
Interaction	RPS7 interactions	FBL RRS1 DDX18 HNRNPU RPS9	1.23e-04	466	22	5	int:RPS7
Interaction	DGCR8 interactions	RRS1 DDX18 HNRNPU HNRNPR	1.25e-04	242	22	4	int:DGCR8
Interaction	RPL4 interactions	FBL RRS1 GTPBP2 DDX18 HNRNPU RPS9	1.29e-04	764	22	6	int:RPL4
Interaction	SF3A1 interactions	SP1 LSM4 HNRNPU HNRNPR DDX42	1.29e-04	471	22	5	int:SF3A1
Interaction	SOX10 interactions	ZNF608 SP1 BCL9	1.33e-04	92	22	3	int:SOX10
Interaction	RSL1D1 interactions	FBL RRS1 DDX18 HNRNPU RPS9	1.40e-04	479	22	5	int:RSL1D1
Interaction	SYK interactions	SP1 RRS1 DDX18 HNRNPU	1.44e-04	251	22	4	int:SYK
Interaction	PUM3 interactions	FBL RRS1 DDX18 HNRNPU	1.51e-04	254	22	4	int:PUM3
Interaction	RPL10A interactions	FBL RRS1 DDX18 HNRNPU RPS9	1.56e-04	490	22	5	int:RPL10A
Interaction	SPOP interactions	FBL HNRNPU TWIST1 HNRNPR DDX42	1.57e-04	491	22	5	int:SPOP
Interaction	RPL7 interactions	FBL RRS1 HNRNPU RPS9 HNRNPR	1.57e-04	491	22	5	int:RPL7
Interaction	REXO4 interactions	FBL RRS1 DDX18 HNRNPU	1.67e-04	261	22	4	int:REXO4
Interaction	EIF4A3 interactions	FBL RRS1 HNRNPU RPS9 HNRNPR	1.69e-04	499	22	5	int:EIF4A3
Interaction	NPM3 interactions	RRS1 DDX18 HNRNPU RPS9	1.70e-04	262	22	4	int:NPM3
Interaction	DHX15 interactions	FBL DDX18 HNRNPU HNRNPR DDX42	1.74e-04	502	22	5	int:DHX15
Interaction	RPL36 interactions	RRS1 DDX18 HNRNPU RPS9 DDX42	1.78e-04	504	22	5	int:RPL36
Interaction	H1-1 interactions	RRS1 COL27A1 DDX18 HNRNPU RPS9	1.83e-04	507	22	5	int:H1-1
Interaction	RPL18 interactions	FBL RRS1 DDX18 HNRNPU RPS9	1.91e-04	512	22	5	int:RPL18
Interaction	PRMT8 interactions	FBL HNRNPU HNRNPR	1.91e-04	104	22	3	int:PRMT8
Interaction	EPRS1 interactions	ZNF608 HNRNPU RPS9 HNRNPR DDX42	1.93e-04	513	22	5	int:EPRS1
Interaction	SF3A2 interactions	LSM4 HNRNPU HNRNPR DDX42	1.99e-04	273	22	4	int:SF3A2
Interaction	NPM1 interactions	FBL SP1 RRS1 DDX18 HNRNPU RPS9 HNRNPR	2.02e-04	1201	22	7	int:NPM1
Cytoband	Ensembl 112 genes in cytogenetic band chr7p21	COL28A1 TWIST1	8.37e-04	89	22	2	chr7p21
GeneFamily	Collagens	COL5A2 COL21A1 COL28A1 COL27A1	2.58e-08	46	13	4	490
GeneFamily	DEAD-box helicases	DDX18 DDX42	4.04e-04	42	13	2	499
Coexpression	NABA_COLLAGENS	COL5A2 COL21A1 COL28A1 COL27A1	4.94e-08	44	22	4	M3005
Coexpression	CAIRO_HEPATOBLASTOMA_CLASSES_UP	FBL LSM4 RRS1 DDX18 RPS9 HNRNPR DDX42	4.60e-07	612	22	7	M4772
Coexpression	NABA_CORE_MATRISOME	COL5A2 COL21A1 COL28A1 OTOL1 COL27A1	2.79e-06	275	22	5	M5884
Coexpression	BUSSLINGER_DUODENAL_DIFFERENTIATING_STEM_CELLS	FBL LSM4 HNRNPU RPS9 HNRNPR	4.62e-06	305	22	5	M40025
Coexpression	NABA_COLLAGENS	COL5A2 COL28A1 COL27A1	6.20e-06	43	22	3	MM17060
Coexpression	HALLMARK_MYC_TARGETS_V1	FBL DDX18 HNRNPU HNRNPR	2.16e-05	200	22	4	M5926
Coexpression	NABA_CORE_MATRISOME	COL5A2 COL28A1 OTOL1 COL27A1	6.96e-05	270	22	4	MM17057
Coexpression	HOSHIDA_LIVER_CANCER_SUBCLASS_S2	FBL DDX18 HNRNPU	1.19e-04	115	22	3	M7995
Coexpression	KIM_WT1_TARGETS_8HR_DN	LSM4 RPS9 HNRNPR	1.56e-04	126	22	3	M9948
Coexpression	FAN_OVARY_CL1_GPRC5A_TNFRS12A_HIGH_SELECTABLE_FOLLICLE_STROMAL_CELL	FBL RRS1 HNRNPU RPS9	2.59e-04	380	22	4	M41703
Coexpression	HU_FETAL_RETINA_FIBROBLAST	COL5A2 COL21A1 COL27A1 TWIST1	2.72e-04	385	22	4	M39264
ToppCell	15-Trachea-Mesenchymal-Mesenchyme_RSPO2+\|Trachea / Age, Tissue, Lineage and Cell class	ZNF608 COL21A1 COL27A1 NALF1	1.50e-06	174	22	4	fa0681e91724b9a51ee28b214ea5aa14e62ba1a3
ToppCell	3'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_1-Subpleural_fibroblasts-Subpleural_fibroblasts_L.2.1.5.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A2 COL27A1 TWIST1 NALF1	2.35e-06	195	22	4	0866aaf053762d1a021fcbccff058526078a99da
ToppCell	Fetal_29-31_weeks\|World / Lineage, Cell type, age group and donor	COL5A2 COL21A1 COL27A1 NALF1	2.55e-06	199	22	4	5b9d355795dd03a22f0961dfd143425c367a4654
ToppCell	10x_3'_v2v3-Neoplastic-Differentiated-like-AC-like-AC-like_Prolif-F\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	COL5A2 LSM4 COL28A1 HNRNPU	2.55e-06	199	22	4	89d7622c4ae146900d963ac68c6bf011e8674665
ToppCell	Anterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_D_(IT_RORB_THEMIS_LINC00507)_3-Exc_L3-5_LINC00507_SLN\|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types	COL5A2 COL21A1 TWIST1	6.71e-05	162	22	3	b59a0081e285cdf33de56e8b523fe0e446a198f1
ToppCell	TCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma-Serous_Cystadenocarcinoma-5\|TCGA-Ovary / Sample_Type by Project: Shred V9	ZNF608 SP1 HNRNPU	7.21e-05	166	22	3	32d2eaf8a5d03881bf74d680825af2d5110b082d
ToppCell	tumor_Lung-Myeloid_cells-Undetermined\|Myeloid_cells / Location, Cell class and cell subclass	COL28A1 COL27A1 STRIP2	8.15e-05	173	22	3	934550c0290fb1058f353d97dba92757aeb2075e
ToppCell	356C-Myeloid-Macrophage-FABP4+_Macrophage_3\|Myeloid / Donor, Lineage, Cell class and subclass (all cells)	COL5A2 COL27A1 TWIST1	8.72e-05	177	22	3	3d955ea938a1d2fb1b6d68d4997fd454bd632dfc
ToppCell	Children_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell-D046\|Children_(3_yrs) / Lineage, Cell type, age group and donor	COL5A2 COL21A1 NALF1	9.32e-05	181	22	3	9ede19228ba5c0668a9c06c915510b95585216ef
ToppCell	E12.5-Mesenchymal-developing_mesenchymal_cell-mesenchymal_myogenic_precursor_(Axin2+)\|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	FBL RRS1 DDX18	9.63e-05	183	22	3	523896bd1a93bdda81a009768baa3a1bdbd108b8
ToppCell	5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A2 COL27A1 TWIST1	9.63e-05	183	22	3	6d98973098c6d20c5305bce6a83a549a7d8dbfba
ToppCell	5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A2 COL27A1 TWIST1	9.63e-05	183	22	3	803376f5260de83c48d4f7301278d078a32b3e6e
ToppCell	5'-Airway_Nasal-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A2 COL27A1 TWIST1	9.63e-05	183	22	3	cc7f5a17b40e8d901885174922e5fa8877643071
ToppCell	Children_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_2/Club-like_(AT2/Club-like)-D139\|Children_(3_yrs) / Lineage, Cell type, age group and donor	ZNF608 COL28A1 NALF1	9.79e-05	184	22	3	102105ae1a5ef6d42a43f6d9b00f12ed0690ddb7
ToppCell	normal_Lung-Fibroblasts-Myofibroblasts\|normal_Lung / Location, Cell class and cell subclass	COL5A2 COL27A1 TWIST1	9.79e-05	184	22	3	0b336489c10e8c3c957795dd845454f03404382b
ToppCell	5'-Adult-LargeIntestine-Neuronal-Glial_mature\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL5A2 COL21A1 COL28A1	9.94e-05	185	22	3	f607b6ee579562e2f92103fa5c7053df0170a229
ToppCell	moderate-Lymphoid-NK\|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	COL5A2 COL27A1 TWIST1	9.94e-05	185	22	3	4979a787acbc9b4ca8defe91cc79b674e51af1bf
ToppCell	5'-Adult-LargeIntestine-Neuronal\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL5A2 COL21A1 COL28A1	9.94e-05	185	22	3	317f2c854f00aa5957319b818c85eeed7d72ec7f
ToppCell	5'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_2-Peribronchial_fibroblasts-Peribronchial_fibroblasts_L.2.1.3.1\|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	COL5A2 COL27A1 TWIST1	9.94e-05	185	22	3	87c416d14ca6255bee39b16e7571553e36ee3069
ToppCell	5'-Adult-LargeIntestine-Neuronal-Glial_mature-Adult_Glia\|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL5A2 COL21A1 COL28A1	9.94e-05	185	22	3	7bb8fdfe04f85d25056380ec58222366de323a21
ToppCell	kidney_cells-Adult_normal_reference-Mesenchymal-glomerular_mesenchymal_cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A2 COL21A1 TWIST1	1.03e-04	187	22	3	ac8e092b37e042975e2ee057d3f7c6821e58e8b5
ToppCell	kidney_cells-Adult_normal_reference-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell-mesangial_typical\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A2 COL21A1 TWIST1	1.03e-04	187	22	3	d591a3c216997663ab77710fed0d230ffc37e41a
ToppCell	Adult-Mesenchymal-matrix_fibroblast_1_cell-D175\|Adult / Lineage, Cell type, age group and donor	COL5A2 COL21A1 COL27A1	1.03e-04	187	22	3	e15d2967aac248da3517bc2c7d1beaa1d5a0aa7f
ToppCell	kidney_cells-Adult_normal_reference-Mesenchymal-glomerular_mesenchymal_cell-Mesangial_Cell\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A2 COL21A1 TWIST1	1.03e-04	187	22	3	d1dc8c9a2c2cd10c640257161a75e7730ec5bb41
ToppCell	TCGA-Thryoid-Primary_Tumor-Thyroid_Papillary_Carcinoma-Classical-5\|TCGA-Thryoid / Sample_Type by Project: Shred V9	FBL LSM4 RPS9	1.09e-04	191	22	3	f2fe8fe316e449f452075aa37d5e31917221a335
ToppCell	10x5'v1-week_14-16-Mesenchymal_fibro-stroma-arteriolar_fibroblast\|week_14-16 / cell types per 3 fetal stages;per 3',per 5'	COL5A2 COL27A1 TWIST1	1.09e-04	191	22	3	5271198116343c07202649889057e5774d7fdde3
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A2 COL21A1 COL27A1	1.11e-04	192	22	3	9093a9e94a25682d109a7f6edc256a25a61103a0
ToppCell	renal_medulla_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast-\|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group	COL5A2 COL21A1 COL27A1	1.11e-04	192	22	3	9ed5d49621ec1aa01716dc369bba1450b5f015f5
ToppCell	Mesenchymal-matrix_fibroblast_1_cell\|World / Lineage, Cell type, age group and donor	COL5A2 COL21A1 NALF1	1.13e-04	193	22	3	acad568621ed677031797b8c2e34dafea798d681
ToppCell	droplet-Fat-Scat-18m-Mesenchymal\|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL5A2 COL27A1 TWIST1	1.13e-04	193	22	3	8dc6db335678f3a5cfd36026ad811fed8d9cb4bc
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.13e-04	193	22	3	9f69edc97b868d23998abc98928a2e89a885ef8a
ToppCell	droplet-Fat-Scat-18m-Mesenchymal-Cd34+\|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL5A2 COL27A1 TWIST1	1.13e-04	193	22	3	316ebdf15f75d88c348f909b643fcd315364ca84
ToppCell	droplet-Fat-Scat-18m-Mesenchymal-mesenchymal_stem_cell_of_adipose\|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation	COL5A2 COL27A1 TWIST1	1.13e-04	193	22	3	1afdd3f7d703f4204a2cbfe40e135ac7b09213f7
ToppCell	Fetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	COL5A2 COL21A1 NALF1	1.14e-04	194	22	3	011e14d9ed1393275f892060e7708ffadcd0767f
ToppCell	Brain_organoid-organoid_Kanton_Nature-Organoid-2M-Mesenchymal\|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.14e-04	194	22	3	638b9fdce64ed00243b5303800ec66207d5fd640
ToppCell	Brain_organoid-organoid_Kanton_Nature-Organoid-2M-Mesenchymal-choroid_plexus/mesenchymal-like_cells\|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.14e-04	194	22	3	e9868c22934b6c0ac35e3e8270ec0b671bc6582a
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.14e-04	194	22	3	a3e5a15cf6c1361207f661ee15eb634f77daf1cb
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_fibroblastic\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	COL5A2 RPS9 TWIST1	1.14e-04	194	22	3	85e00861c5068a27d0cf0ae677f420c8245baa9a
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro1_(4)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.14e-04	194	22	3	71d3c7448b1734de54187f902f65649f9283bd4c
ToppCell	18-Distal-Mesenchymal-Mesenchyme_SERPINF1-high\|Distal / Age, Tissue, Lineage and Cell class	COL5A2 COL21A1 TWIST1	1.16e-04	195	22	3	f86737bff21d81673238813df61a15cfe88d0b15
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature3_(17)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.16e-04	195	22	3	1cdf5f296029ae424d9dba42e86a6d111e4896e6
ToppCell	3'-GW_trimst-1.5-SmallIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)\|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	ZNF608 COL27A1 SUN1	1.18e-04	196	22	3	85507488f83d8f71b3ee2ad5e5aa0b6ad6193873
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.18e-04	196	22	3	1450cb69c5bf469e97c03bf1890f6f7c54165b8a
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.20e-04	197	22	3	0034bae02ee7fcfea520d453ca3c842ab6963b12
ToppCell	5'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)\|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL5A2 COL28A1 COL27A1	1.20e-04	197	22	3	236a40eb6c08e1d179cf0fb5450b032975c5f6b6
ToppCell	PCW_13-14-Mesenchymal\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.20e-04	197	22	3	73a2085d2682d636726a5432d572ae2a3fbe1c3f
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature3_(17)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.20e-04	197	22	3	31a1852911bda38543916585fda34255fd62a134
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature1_(0)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.20e-04	197	22	3	11a4c417f035e554431a8f03be13b5eefa3530c0
ToppCell	10x_3'_v3\|World / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	HNRNPU RPS9 HNRNPR	1.22e-04	198	22	3	aabb8e9b162ae4cb26ea860c99decdbb51e379e1
ToppCell	PCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_immature2_(2)\|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung	COL21A1 RPS9 NALF1	1.22e-04	198	22	3	89e25687b614525548279e5fa293c66f5c4abec3
ToppCell	367C-Fibroblasts-Fibroblast-B_(Myofibroblast)-\|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)	COL5A2 COL27A1 TWIST1	1.22e-04	198	22	3	c55608633f66e3d434c5d81324efb07c5120d2c2
ToppCell	5'-GW_trimst-2\|5' / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL5A2 COL21A1 RPS9	1.22e-04	198	22	3	677816ea6d1706d99b7757d43b6b375276b25639
ToppCell	11.5-Airway-Mesenchymal\|Airway / Age, Tissue, Lineage and Cell class	COL5A2 COL21A1 RPS9	1.22e-04	198	22	3	fe08709d043d927988b1bb262c766b0b572fc927
ToppCell	PSB\|World / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	ZNF608 COL21A1 COL28A1	1.22e-04	198	22	3	4e6b0d1abc55d7a0d89bd7ecf0f13dc5bed66626
ToppCell	367C-Fibroblasts-Fibroblast-B_(Myofibroblast)\|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)	COL5A2 COL27A1 TWIST1	1.22e-04	198	22	3	3e5459038fc6ed95f529eb4d1dc5113e16c19012
ToppCell	11.5-Distal-Mesenchymal\|Distal / Age, Tissue, Lineage and Cell class	COL5A2 COL21A1 RPS9	1.22e-04	198	22	3	5c606d881f151404287d9b43c9490e9bb486ef54
ToppCell	10x_3'_v2v3-Neoplastic-Differentiated-like-AC-like-AC-like-F\|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	COL5A2 COL28A1 HNRNPU	1.22e-04	198	22	3	81c4c5377d0901ee9594424f08b0e4101686c850
ToppCell	3'-Pediatric_IBD-SmallIntestine-Mesenchymal-fibroblastic-Stromal_4_(MMP1+)\|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract	COL5A2 COL27A1 TWIST1	1.22e-04	198	22	3	229588189825b1080181db9515185677b742c668
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_fibroblastic\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.22e-04	198	22	3	17dc055e2a289496d9c5cdbf3297bdf906dc6d22
ToppCell	Control_saline-Mesenchymal_fibroblastic-Fibroblasts-Activated_MatrixFB\|Control_saline / Treatment groups by lineage, cell group, cell type	COL5A2 COL21A1 COL27A1	1.22e-04	198	22	3	0c4d2c68a42f8a9e964e2dd28092fe75f5216834
ToppCell	Fetal_29-31_weeks-Mesenchymal\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	COL5A2 COL21A1 NALF1	1.22e-04	198	22	3	21cf4d81386761d09d0f6829c01c198e5524176d
ToppCell	distal-mesenchymal-Mesothelial-1\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	COL5A2 TWIST1 NALF1	1.22e-04	198	22	3	431bf719ee5cce4c9e8b6b405819b67e98fad3ca
ToppCell	11.5-Airway-Mesenchymal-Mesenchyme_RSPO2+\|Airway / Age, Tissue, Lineage and Cell class	COL5A2 RPS9 NALF1	1.22e-04	198	22	3	23783572c22c24d9fb8e14dc1f3852d2094157df
ToppCell	distal-mesenchymal-Mesothelial\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	COL5A2 TWIST1 NALF1	1.22e-04	198	22	3	52e3cb45472dd6db31ae533e9ea0c3b550f11496
ToppCell	Transplant_Alveoli_and_parenchyma-Mesenchymal-Mesothelium\|Mesenchymal / Tissue, Lineage and Cell class of Lung Cells from 10X	COL27A1 TWIST1 NALF1	1.23e-04	199	22	3	6cfefd81e8a1a883fb4279ac4ab0b298ed2a0817
ToppCell	Enterocyte_Progenitors\|World / shred on cell type and cluster	FBL DDX18 RPS9	1.23e-04	199	22	3	776bcc887927dea9ebd76ec4338ce2225c319c2c
ToppCell	PCW_10-12-Mesenchymal\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	COL5A2 COL21A1 NALF1	1.23e-04	199	22	3	a09292de4c4447b8eee55d401808e43b817321cc
ToppCell	megakaryocytic-CD34+_Megakaryoblast\|megakaryocytic / Lineage and Cell class	FBL DDX18 HNRNPR	1.23e-04	199	22	3	99a65887d3c8a2cde26693dd74404b101bba9d58
ToppCell	Mesenchymal\|World / Lineage, Cell type, age group and donor	COL5A2 COL21A1 NALF1	1.23e-04	199	22	3	4bac110c2b3609f6ee5d0e3275da0824a6240270
ToppCell	Bronchial-NucSeq-Stromal-Fibroblastic-Fibro_perichondrial\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	COL5A2 COL27A1 TWIST1	1.23e-04	199	22	3	abd6117f8a3d7e798d8471c16d97b34aaf50fc9c
ToppCell	HSPCs\|World / Lineage and Cell class	FBL RRS1 HNRNPU	1.23e-04	199	22	3	df1ffc416c6946f1ba182f242a50ee41a571d565
ToppCell	CV-Moderate-2\|CV / Virus stimulation, Condition and Cluster	FBL LSM4 RRS1	1.23e-04	199	22	3	2d98424a5247e87f98095c11fb945289092a9d75
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-6m-Neuroepithelial\|6m / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.25e-04	200	22	3	2cc98abf11f5b58707de45a2282f03d47f00f035
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-2m-Neuroepithelial-Proteoglycan-expressing_cell\|2m / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.25e-04	200	22	3	eed2bafddcd041ef5fcc4d1d31edb8be4d83ce01
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-1_mon-Radial_glial-RG\|1_mon / Sample Type, Dataset, Time_group, and Cell type.	FBL LSM4 RPS9	1.25e-04	200	22	3	b3775715b66aee18cff469bf3dbe9c305671c6d6
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-2m-Neuroepithelial\|2m / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.25e-04	200	22	3	3da9441c0f1e242f0d195de47ecd4c24dfdca232
ToppCell	Neuronal-Inhibitory-iA-iA_1(SST_PAX6)-NMBR-\|Neuronal / cells hierarchy compared to all cells using T-Statistic	ZNF608 COL5A2 COL21A1	1.25e-04	200	22	3	d416a7be1a4e6232fb58a9687774da24821f1fdd
ToppCell	Brain_organoid-organoid_Paulsen_bioRxiv-1_mon-Radial_glial\|1_mon / Sample Type, Dataset, Time_group, and Cell type.	FBL LSM4 RPS9	1.25e-04	200	22	3	9069e8d3bcc5f44baa00f2abb6cffd87586c3eab
ToppCell	Neuronal-Inhibitory-iA-iA_1(SST_PAX6)-NMBR\|Neuronal / cells hierarchy compared to all cells using T-Statistic	ZNF608 COL5A2 COL21A1	1.25e-04	200	22	3	862db57d043bdf3cb059fbfc8b29bc1eafdf64ec
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-3m-Neuroepithelial-Proteoglycan-expressing_cell\|3m / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.25e-04	200	22	3	94ef227b2162ba77af33b8cc8aaa4a7e3bdf79a7
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-3m-Neuroepithelial\|3m / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.25e-04	200	22	3	429028c3112d279b26abf3296e01b1884b4b7fcb
ToppCell	Transplant_Alveoli_and_parenchyma-Mesenchymal-Mesothelium\|Transplant_Alveoli_and_parenchyma / Tissue, Lineage and Cell class of Lung Cells from 10X	COL5A2 TWIST1 NALF1	1.25e-04	200	22	3	c082bc21ec7c5323439d108ea8aea510e1113c3f
ToppCell	Brain_organoid-organoid_Tanaka_cellReport-6m-Neuroepithelial-Proteoglycan-expressing_cell\|6m / Sample Type, Dataset, Time_group, and Cell type.	COL5A2 COL21A1 TWIST1	1.25e-04	200	22	3	0f7431f670f3a175377cefae3479403a881bb8fb
ToppCell	Neuronal-Inhibitory-iA-iA_1(SST_PAX6)-NMBR--L1\|Neuronal / cells hierarchy compared to all cells using T-Statistic	ZNF608 COL5A2 COL21A1	1.25e-04	200	22	3	a91345f268f13170c27309333603eb82400c9947
ToppCell	frontal_cortex-Neuronal-GABAergic_neuron-Sncg-Sncg_Gpr50\|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	COL5A2 STRIP2	1.12e-03	101	22	2	6523c314166dcf66c3ed13c02ca4b886b068e5b8
ToppCell	Endothelial-Endothelial-A\|Endothelial / shred on cell class and cell subclass (v4)	RRS1 RPS9	1.63e-03	122	22	2	65849d1296934d5765afd006cbb6739383b9f49f
ToppCell	Control-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	COL21A1 COL27A1	1.71e-03	125	22	2	b162a5bfbb8ac5e65e13578fef9de442a9e4fd8b
ToppCell	RV-14._Fibroblast_III\|World / Chamber and Cluster_Paper	FBL COL28A1	1.96e-03	134	22	2	8c4046ba1f85172915a112499e492c3efe8474c2
ToppCell	LPS-antiTNF-Myeloid-Monocytes,_Macrophages-T-cells\|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	STRIP2 NALF1	2.01e-03	136	22	2	186be8e1595608004b8216892cb9c7a7f31fbb4d
ToppCell	Enterocyte-C_02\|Enterocyte / shred on cell type and cluster	FBL DDX18	2.01e-03	136	22	2	daf11618c65e8fa2d77001b5c277d534cc012a4b
ToppCell	facs-Pancreas-Exocrine-18m-Epithelial-nan\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ZNF608 STRIP2	2.04e-03	137	22	2	e9b88ad86b75454a8292a94879c5b665adc42744
ToppCell	10x3'2.3-week_12-13-Myeloid_DC-DC-DC_precursor\|week_12-13 / cell types per 3 fetal stages;per 3',per 5'	FBL RRS1	2.07e-03	138	22	2	096c0c8ed396a27d29cca94e2e15099b64129c57
ToppCell	droplet-Large_Intestine-COLON_-_"PROM_Tm"-30m-Epithelial-Lgr5+_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RPS9 BCL9	2.10e-03	139	22	2	c300f953ff9c5e820ff16bcd9942d279b37b79db
ToppCell	droplet-Large_Intestine-COLON_-_"PROM_Tm"-30m-Epithelial-intestinal_crypt_stem_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RPS9 BCL9	2.10e-03	139	22	2	95b19d7459d9b54162cf01d278462245d34802d5
ToppCell	RV-14._Fibroblast_III\|RV / Chamber and Cluster_Paper	FBL COL28A1	2.13e-03	140	22	2	b4fee8eb6bf855b364b00bda3f78e49d851bbca0
ToppCell	Globus_pallidus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_3\|Globus_pallidus / BrainAtlas - Mouse McCarroll V32	COL28A1 TWIST1	2.22e-03	143	22	2	9bfb3674c8f011b9cf928b522777b8d54478db8d
ToppCell	367C-Myeloid-Macrophage-SPP1+_Macrophage_2\|Myeloid / Donor, Lineage, Cell class and subclass (all cells)	HNRNPU STRIP2	2.25e-03	144	22	2	3ba7f8bd6d1c551048403c94693d63e60f7cbbb7
ToppCell	367C-Myeloid-Macrophage-SPP1+_Macrophage_2\|Macrophage / Donor, Lineage, Cell class and subclass (all cells)	HNRNPU STRIP2	2.25e-03	144	22	2	38ff324366ad5be626e3657c1e33277fc36ddd4c
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD8_c01-LEF1\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	COL5A2 RPS9	2.25e-03	144	22	2	ea174487f8ade90deb33b964a7f7e65062606565
ToppCell	RV-05._Cytoplasmic_Cardiomyocyte_I\|RV / Chamber and Cluster_Paper	FBL RPS9	2.32e-03	146	22	2	25c61342a8acc3a7681365a7710598e07e72990e
Computational	Neighborhood of KPNB1	FBL DDX18 HNRNPU HNRNPR	1.34e-06	73	13	4	GNF2_KPNB1
Computational	Neighborhood of HDAC1	FBL DDX18 HNRNPU HNRNPR	6.91e-06	110	13	4	GNF2_HDAC1
Computational	Neighborhood of APEX1	FBL HNRNPU HNRNPR	1.63e-04	92	13	3	GNF2_APEX1
Computational	Neighborhood of BUB3	FBL LSM4 HNRNPU HNRNPR	2.57e-04	277	13	4	MORF_BUB3
Computational	Neighborhood of DAP3	FBL HNRNPU HNRNPR	3.49e-04	119	13	3	GNF2_DAP3
Computational	Neighborhood of RAD23A	FBL LSM4 HNRNPU HNRNPR	6.12e-04	348	13	4	MORF_RAD23A
Computational	Neighborhood of RFC4	DDX18 HNRNPU HNRNPR	7.01e-04	151	13	3	MORF_RFC4
Computational	Neighborhood of TDG	HNRNPU HNRNPR	7.86e-04	35	13	2	GNF2_TDG
Computational	Neighborhood of ELAC2	DDX18 HNRNPR	1.36e-03	46	13	2	GNF2_ELAC2
Computational	Neighborhood of PRKDC	DDX18 HNRNPU HNRNPR	1.39e-03	191	13	3	MORF_PRKDC
Computational	Neighborhood of DENR	HNRNPU HNRNPR	1.67e-03	51	13	2	GNF2_DENR
Computational	Neighborhood of DEK	HNRNPU HNRNPR	2.15e-03	58	13	2	GNF2_DEK
Computational	Neighborhood of SMC1L1	HNRNPU HNRNPR	2.45e-03	62	13	2	MORF_SMC1L1
Computational	Neighborhood of DDX5	DDX18 HNRNPU	2.69e-03	65	13	2	GCM_DDX5
Computational	RNA splicing.	HNRNPU HNRNPR	2.69e-03	65	13	2	MODULE_183
Computational	Neighborhood of TERF1	HNRNPU HNRNPR	2.86e-03	67	13	2	MORF_TERF1
Computational	Neighborhood of EIF3S2	FBL LSM4 HNRNPR	2.86e-03	246	13	3	MORF_EIF3S2
Computational	Neighborhood of CBFB	DDX18 HNRNPU	3.11e-03	70	13	2	GCM_CBFB
Computational	Neighborhood of RBBP6	FBL DDX18	3.11e-03	70	13	2	GNF2_RBBP6
Computational	Neighborhood of NPM1	FBL HNRNPR	3.29e-03	72	13	2	GNF2_NPM1
Computational	Neighborhood of DEK	FBL HNRNPU HNRNPR	3.49e-03	264	13	3	MORF_DEK
Computational	Genes in the cancer module 331.	SP1 HNRNPU	3.57e-03	75	13	2	MODULE_331
Computational	Neighborhood of SOD1	FBL LSM4 HNRNPU	4.04e-03	278	13	3	MORF_SOD1
Computational	Neighborhood of HDAC2	DDX18 HNRNPU HNRNPR	4.12e-03	280	13	3	MORF_HDAC2
Computational	Neighborhood of RRM1	HNRNPU HNRNPR	6.50e-03	102	13	2	MORF_RRM1
Computational	Neighborhood of PTPN11	LSM4 HNRNPR	7.26e-03	108	13	2	MORF_PTPN11
Drug	NSC-14083	FAM120C FBL LSM4 HNRNPR DDX42	1.48e-06	210	22	5	CID000005297
Drug	Nafronyl oxalate [3200-06-4]; Up 200; 8.4uM; MCF7; HT_HG-U133A	COL5A2 LSM4 HNRNPR BCL9	3.38e-05	195	22	4	5287_UP
Drug	Pirenperone [ 75444-65-4]; Up 200; 10.2uM; HL60; HT_HG-U133A	COL5A2 SP1 HNRNPU SUN1	3.52e-05	197	22	4	2455_UP
Drug	Iobenguane sulfate; Up 200; 10.8uM; MCF7; HT_HG-U133A	COL21A1 GTPBP2 NALF1 BCL9	3.59e-05	198	22	4	2878_UP
Drug	strontium ranelate	COL21A1 RRS1 COL27A1	5.47e-05	77	22	3	CID006918182
Drug	AC1L2HAX	SP1 TWIST1	5.85e-05	12	22	2	CID000020942
Drug	Stallimycin	SP1 HNRNPU TWIST1	6.13e-05	80	22	3	CID000003115
Drug	cyclooctane	FBL TWIST1	1.20e-04	17	22	2	CID000009266
Drug	ticlopidine	COL21A1 RRS1 COL27A1	1.30e-04	103	22	3	CID000005472
Drug	chromomycin A3	SP1 RRS1 HNRNPU	1.30e-04	103	22	3	CID000656673
Drug	351A	COL21A1 COL27A1	1.68e-04	20	22	2	CID000122144
Drug	DMSe	FBL COL21A1 COL27A1	2.71e-04	132	22	3	CID000020796
Drug	deamino-NAD	FBL BCL9	3.08e-04	27	22	2	CID000004480
Drug	PCR 4099	COL21A1 RRS1 COL27A1	3.15e-04	139	22	3	CID000002806
Drug	[(2R,3R,4R,5S,6R)-2-[[[(2R,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-hydroxyphosphoryl]oxy-5-hydroxy-6-(hydroxymethyl)-3-[(2-tritioacetyl)amino]oxan-4-yl] (3R)-3-hydroxydecanoate	FBL RPS9	3.32e-04	28	22	2	CID011650719
Drug	isodesmosine	COL21A1 COL27A1	4.62e-04	33	22	2	CID000013811
Drug	Sirius red	COL21A1 COL27A1	5.20e-04	35	22	2	CID005486818
Drug	GK-101	COL21A1 COL27A1	5.50e-04	36	22	2	CID000161853
Drug	AC1NRA5C	HNRNPU HNRNPR DDX42	6.07e-04	174	22	3	CID005287709
Drug	AC1MRIIV	COL21A1 COL27A1	6.46e-04	39	22	2	CID003518584
Drug	cytosine	SP1 RRS1 TWIST1 HNRNPR	7.70e-04	441	22	4	CID000000597
Drug	retinoic acid; Down 200; 1uM; MCF7; HT_HG-U133A	SP1 SUN1 BCL9	7.72e-04	189	22	3	5208_DN
Drug	PD123177	COL21A1 COL27A1	7.86e-04	43	22	2	CID000114899
Drug	Midodrine hydrochloride [3092-17-9]; Down 200; 13.8uM; MCF7; HT_HG-U133A	COL5A2 NALF1 BCL9	7.96e-04	191	22	3	2250_DN
Drug	Mycophenolic acid [24280-93-1]; Down 200; 12.4uM; MCF7; HT_HG-U133A	GTPBP2 HNRNPU RPS9	7.96e-04	191	22	3	2857_DN
Drug	Sulfamethoxazole [723-46-6]; Down 200; 15.8uM; MCF7; HT_HG-U133A	SP1 SUN1 NALF1	8.20e-04	193	22	3	4690_DN
Drug	Metanephrine hydrochloride DL [881-95-8]; Down 200; 17.2uM; HL60; HG-U133A	LSM4 HNRNPU HNRNPR	8.20e-04	193	22	3	2015_DN
Drug	NC-4	COL21A1 COL27A1	8.23e-04	44	22	2	CID006420119
Drug	Scoulerine [6451-73-6]; Down 200; 12.2uM; MCF7; HT_HG-U133A	SP1 HNRNPU BCL9	8.32e-04	194	22	3	2891_DN
Drug	Griseofulvin [126-07-8]; Down 200; 11.2uM; MCF7; HT_HG-U133A	SP1 HNRNPU BCL9	8.32e-04	194	22	3	2293_DN
Drug	Fluorometholone [426-13-1]; Up 200; 10.6uM; MCF7; HT_HG-U133A	SP1 HNRNPU SUN1	8.45e-04	195	22	3	6247_UP
Drug	Diltiazem hydrochloride [33286-22-5]; Down 200; 8.8uM; MCF7; HT_HG-U133A	SP1 GTPBP2 RPS9	8.45e-04	195	22	3	1532_DN
Drug	Metoprolol-(+,-) (+)-tartrate salt [56392-17-7]; Down 200; 5.8uM; PC3; HT_HG-U133A	HNRNPU SUN1 NALF1	8.45e-04	195	22	3	4508_DN
Drug	Dantrolene sodium salt [14663-23-1]; Down 200; 11.8uM; MCF7; HT_HG-U133A	HNRNPU SUN1 BCL9	8.58e-04	196	22	3	2329_DN
Drug	Ritodrine hydrochloride [23239-51-2]; Down 200; 12.4uM; MCF7; HT_HG-U133A	SP1 GTPBP2 BCL9	8.58e-04	196	22	3	5680_DN
Drug	Mefloquine hydrochloride [51773-92-3]; Down 200; 9.6uM; MCF7; HT_HG-U133A	SP1 SUN1 BCL9	8.58e-04	196	22	3	2210_DN
Drug	Pregnenolone [145-13-1]; Down 200; 12.6uM; MCF7; HT_HG-U133A	FAM120C RPS9 BCL9	8.58e-04	196	22	3	4802_DN
Drug	Cyproterone acetate [427-51-0]; Up 200; 9.6uM; MCF7; HT_HG-U133A	COL5A2 FAM120C COL21A1	8.58e-04	196	22	3	3545_UP
Drug	monastrol; Down 200; 20uM; MCF7; HG-U133A	DDX18 HNRNPU DDX42	8.58e-04	196	22	3	614_DN
Drug	Demeclocycline hydrochloride [64-73-3]; Down 200; 8uM; MCF7; HT_HG-U133A	FAM120C HNRNPU SUN1	8.58e-04	196	22	3	4728_DN
Drug	Oxprenolol hydrochloride [6452-73-9]; Up 200; 13.2uM; MCF7; HT_HG-U133A	COL5A2 NALF1 BCL9	8.58e-04	196	22	3	7225_UP
Drug	DO 897/99; Down 200; 8.2uM; MCF7; HT_HG-U133A	GTPBP2 SUN1 BCL9	8.70e-04	197	22	3	7462_DN
Drug	Articaine hydrochloride [23964-57-0]; Down 200; 12.4uM; MCF7; HT_HG-U133A	RPS9 NALF1 BCL9	8.70e-04	197	22	3	6517_DN
Drug	rosiglitazone; Down 200; 10uM; MCF7; HT_HG-U133A_EA	SP1 GTPBP2 SUN1	8.70e-04	197	22	3	1071_DN
Drug	Phenindione [83-12-5]; Down 200; 18uM; MCF7; HT_HG-U133A	HNRNPU SUN1 BCL9	8.70e-04	197	22	3	2868_DN
Drug	Betonicine [515-25-3]; Down 200; 25.2uM; MCF7; HT_HG-U133A	HNRNPU SUN1 RPS9	8.70e-04	197	22	3	6063_DN
Drug	aspirin, USP; Down 200; 100uM; MCF7; HT_HG-U133A	FAM120C HNRNPU RPS9	8.70e-04	197	22	3	5564_DN
Drug	LY 294002; Down 200; 0.1uM; MCF7; HT_HG-U133A	HNRNPU RPS9 BCL9	8.70e-04	197	22	3	5576_DN
Drug	Fludrocortisone acetate [514-36-3]; Up 200; 9.4uM; MCF7; HT_HG-U133A	FAM120C SUN1 NALF1	8.70e-04	197	22	3	2328_UP
Drug	Probucol [23288-49-5]; Down 200; 7.8uM; PC3; HT_HG-U133A	FAM120C HNRNPU SUN1	8.70e-04	197	22	3	4666_DN
Drug	16-phenyl tetranor Prostaglandin E2; Up 200; 10uM; MCF7; HT_HG-U133A	COL5A2 FAM120C RPS9	8.70e-04	197	22	3	7505_UP
Drug	Althiazide [5588-16-9]; Up 200; 10.4uM; MCF7; HT_HG-U133A	FAM120C COL21A1 NALF1	8.70e-04	197	22	3	6829_UP
Drug	Metoclopramide monohydrochloride [7232-21-5]; Down 200; 11.8uM; MCF7; HT_HG-U133A	COL5A2 FAM120C GTPBP2	8.83e-04	198	22	3	4750_DN
Drug	(S)-(-)-Atenolol [93379-54-5]; Up 200; 15uM; HL60; HT_HG-U133A	COL5A2 SUN1 NALF1	8.83e-04	198	22	3	3067_UP
Drug	5155877; Down 200; 10uM; PC3; HT_HG-U133A	COL5A2 GTPBP2 TWIST1	8.83e-04	198	22	3	6569_DN
Drug	Pentetic acid [67-43-6]; Down 200; 10.2uM; PC3; HT_HG-U133A	FAM120C SP1 SUN1	8.83e-04	198	22	3	4669_DN
Drug	Tropine [120-29-6]; Down 200; 28.4uM; PC3; HT_HG-U133A	SP1 SUN1 NALF1	8.83e-04	198	22	3	5790_DN
Drug	Roxarsone [121-19-7]; Down 200; 15.2uM; MCF7; HT_HG-U133A	SP1 GTPBP2 HNRNPU	8.83e-04	198	22	3	3511_DN
Drug	Roxarsone [121-19-7]; Up 200; 15.2uM; MCF7; HT_HG-U133A	FAM120C SP1 HNRNPU	8.83e-04	198	22	3	5470_UP
Drug	Practolol [6673-35-4]; Down 200; 15uM; MCF7; HT_HG-U133A	SP1 RPS9 NALF1	8.96e-04	199	22	3	5664_DN
Drug	Cefalonium [5575-21-3]; Up 200; 8.8uM; HL60; HT_HG-U133A	COL5A2 SP1 NALF1	8.96e-04	199	22	3	2921_UP
Drug	Dioxybenzone [131-53-3]; Up 200; 16.4uM; HL60; HT_HG-U133A	FAM120C SUN1 NALF1	8.96e-04	199	22	3	3101_UP
Drug	Metaraminol bitartrate [33402-03-8]; Up 200; 8.6uM; MCF7; HT_HG-U133A	FAM120C SUN1 NALF1	8.96e-04	199	22	3	2298_UP
Drug	Trazodone hydrochloride [25332-39-2]; Down 200; 9.8uM; MCF7; HT_HG-U133A	GTPBP2 SUN1 RPS9	8.96e-04	199	22	3	7452_DN
Drug	Antazoline hydrochloride [2508-72-7]; Up 200; 13.2uM; MCF7; HT_HG-U133A	SP1 HNRNPU SUN1	8.96e-04	199	22	3	6775_UP
Drug	Homosalate [118-56-9]; Down 200; 15.2uM; MCF7; HT_HG-U133A	COL5A2 FAM120C GTPBP2	8.96e-04	199	22	3	3879_DN
Drug	Madecassol	COL21A1 COL27A1	8.99e-04	46	22	2	CID000108062
Drug	wortmannin from Penicillium funiculosum; Down 200; 0.01uM; MCF7; HT_HG-U133A	FAM120C SP1 HNRNPU	9.09e-04	200	22	3	5603_DN
Drug	Isocorydine (+) [475-67-2]; Down 200; 11.8uM; PC3; HT_HG-U133A	FAM120C SUN1 NALF1	9.09e-04	200	22	3	4505_DN
Disease	social communication impairment	OTOL1 COL27A1	2.60e-04	32	22	2	EFO_0005427
Disease	triglyceride measurement, response to diuretic	LSM4 DDX18	2.93e-04	34	22	2	EFO_0004530, GO_0036270
Disease	cortical thickness	COL5A2 COL21A1 SP1 GTPBP2 NALF1	1.17e-03	1113	22	5	EFO_0004840
Disease	Parkinson disease	ZNF608 COL5A2 SP1	1.68e-03	321	22	3	MONDO_0005180
Disease	colorectal cancer, hormone replacement therapy	LSM4 NALF1	1.95e-03	88	22	2	EFO_0003961, MONDO_0005575
Disease	Psychotic Disorders	SP1 BCL9	2.56e-03	101	22	2	C0033975
Disease	Intellectual Disability	GTPBP2 HNRNPU HNRNPR	4.29e-03	447	22	3	C3714756
Disease	Global developmental delay	GTPBP2 HNRNPR	4.39e-03	133	22	2	C0557874
Disease	cognitive decline measurement	OTOL1 COL27A1 NALF1	5.42e-03	486	22	3	EFO_0007710
Disease	eosinophilic esophagitis	OTOL1 GTPBP2	6.52e-03	163	22	2	EFO_0004232
Disease	reading and spelling ability	OTOL1 NALF1	6.75e-03	166	22	2	EFO_0005301
Disease	Malignant neoplasm of breast	FBL DDX18 RPS9 HNRNPR	7.56e-03	1074	22	4	C0006142
Disease	Neoplasm Invasiveness	SP1 TWIST1	8.23e-03	184	22	2	C0027626

Protein segments in the cluster

Peptide	Gene	Start	Entry
GKKKNGRNRGGKANN	GTPBP2	41	Q9BX10
GKGKKLNIGGGGLGY	DDX42	646	Q86XP3
GRGRGGKRGNQSGKN	FBL	71	P22087
GQQQAGGKKKAEGGG	HNRNPU	206	Q00839
NKNKSGKNQFNRGGG	HNRNPU	691	Q00839
GGNVGGKRKADGYNQ	HNRNPR	566	O43390
NSNEGKQKKRGGGGG	DDX18	626	Q9NVP1
GDEGKKGSKGNQGQR	COL28A1	551	Q2UY09
GSMGLKNGAGNGAKG	BCL9	81	O00512
KNGAGNGAKGKGKRE	BCL9	86	O00512
GKGHGKEQTGRGSKG	FAM120C	991	Q9NX05
KKGDKGNQGEKGIQG	COL21A1	696	Q96P44
GGGNTNFGRGRKGQK	COL5A2	101	P05997
KGRTGAKGAKGYQGQ	COL27A1	1251	Q8IZC6
GGLQQQKQQKGRGMG	LSM4	91	Q9Y4Z0
KGNIGLGGVKGQKGS	OTOL1	181	A6NHN0
KNAKKGQGGAGAGDD	RPS9	176	P46781
GNGNGGGKGKQAAPK	STRIP2	16	Q9ULQ0
KIEKGVGGNNGGNGN	SP1	16	P08047
GGKRKGGLGGKMNSG	RRS1	331	Q15050
GLQNKNRGGANGKGR	ZNF608	456	Q9ULD9
GDLKGGNKAAIQGNG	SUN1	156	O94901
QGKRGKKSAGCGGGG	TWIST1	71	Q15672
GGGKGNRGKDDRGKA	NALF1	141	B1AL88