Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding

SOX1 HEY2 KLF16 POU3F3 DMRTA1 IRX3 SOX21 NKX2-4 ZIC5 HES5 BHLHE22 INSM1 ZIC2 ZIC3

6.99e-1012443014GO:0000978
GeneOntologyMolecularFunctioncis-regulatory region sequence-specific DNA binding

SOX1 HEY2 KLF16 POU3F3 DMRTA1 IRX3 SOX21 NKX2-4 ZIC5 HES5 BHLHE22 INSM1 ZIC2 ZIC3

9.26e-1012713014GO:0000987
GeneOntologyMolecularFunctionDNA-binding transcription factor activity, RNA polymerase II-specific

SOX1 HEY2 KLF16 POU3F3 DMRTA1 IRX3 SOX21 NKX2-4 ZIC5 HES5 BHLHE22 INSM1 ZIC2 ZIC3

3.64e-0914123014GO:0000981
GeneOntologyMolecularFunctionRNA polymerase II transcription regulatory region sequence-specific DNA binding

SOX1 HEY2 KLF16 POU3F3 DMRTA1 IRX3 SOX21 NKX2-4 ZIC5 HES5 BHLHE22 INSM1 ZIC2 ZIC3

5.55e-0914593014GO:0000977
GeneOntologyMolecularFunctionDNA-binding transcription repressor activity, RNA polymerase II-specific

HEY2 KLF16 IRX3 HES5 INSM1

1.05e-04320305GO:0001227
GeneOntologyMolecularFunctionDNA-binding transcription repressor activity

HEY2 KLF16 IRX3 HES5 INSM1

1.15e-04326305GO:0001217
GeneOntologyMolecularFunctionDNA-binding transcription activator activity, RNA polymerase II-specific

SOX1 IRX3 SOX21 ZIC2 ZIC3

1.36e-03560305GO:0001228
GeneOntologyMolecularFunctionDNA-binding transcription activator activity

SOX1 IRX3 SOX21 ZIC2 ZIC3

1.42e-03566305GO:0001216
GeneOntologyMolecularFunctionprotein dimerization activity

HEY2 POU3F3 TAF4 HES5 BHLHE22 GLUD2

8.11e-031205306GO:0046983
GeneOntologyBiologicalProcessnegative regulation of DNA-templated transcription

SOX1 HEY2 PRDM12 ZNF703 KLF16 POU3F3 IRX3 SOX21 HES5 BHLHE22 INSM1 ZIC2

2.48e-0713993012GO:0045892
GeneOntologyBiologicalProcessnegative regulation of RNA biosynthetic process

SOX1 HEY2 PRDM12 ZNF703 KLF16 POU3F3 IRX3 SOX21 HES5 BHLHE22 INSM1 ZIC2

2.77e-0714133012GO:1902679
GeneOntologyBiologicalProcessregionalization

SOX1 HEY2 IRX3 HES5 WNT1 BHLHE22 ZIC2 ZIC3

2.93e-07478308GO:0003002
GeneOntologyBiologicalProcessloop of Henle development

POU3F3 IRX3 HES5

3.31e-0710303GO:0072070
GeneOntologyBiologicalProcesspattern specification process

SOX1 HEY2 IRX3 HES5 WNT1 BHLHE22 ZIC2 ZIC3

6.05e-07526308GO:0007389
GeneOntologyBiologicalProcesspositive regulation of transcription by RNA polymerase II

SOX1 HEY2 POU3F3 IRX3 TAF4 SOX21 HES5 WNT1 BHLHE22 ZIC2 ZIC3

2.07e-0613903011GO:0045944
GeneOntologyBiologicalProcessbrain development

SOX1 POU3F3 SOX21 ZIC5 HES5 WNT1 BHLHE22 ZIC2 ZIC3

2.35e-06859309GO:0007420
GeneOntologyBiologicalProcessepithelium development

HEY2 ZNF703 POU3F3 IRX3 SOX21 ZIC5 HES5 WNT1 INSM1 ZIC2 ZIC3

3.55e-0614693011GO:0060429
GeneOntologyBiologicalProcesshead development

SOX1 POU3F3 SOX21 ZIC5 HES5 WNT1 BHLHE22 ZIC2 ZIC3

4.08e-06919309GO:0060322
GeneOntologyBiologicalProcessforebrain development

SOX1 POU3F3 ZIC5 HES5 WNT1 BHLHE22 ZIC3

5.12e-06489307GO:0030900
GeneOntologyBiologicalProcessspecification of loop of Henle identity

IRX3 HES5

1.22e-054302GO:0072086
GeneOntologyBiologicalProcessnegative regulation of transcription by RNA polymerase II

SOX1 HEY2 PRDM12 KLF16 POU3F3 IRX3 SOX21 HES5 INSM1

1.23e-051053309GO:0000122
GeneOntologyBiologicalProcessnephron tubule development

POU3F3 IRX3 HES5 WNT1

1.89e-05110304GO:0072080
GeneOntologyBiologicalProcesscentral nervous system segmentation

ZIC2 ZIC3

2.04e-055302GO:0035283
GeneOntologyBiologicalProcessspecification of nephron tubule identity

IRX3 HES5

2.04e-055302GO:0072081
GeneOntologyBiologicalProcessproximal/distal pattern formation involved in nephron development

IRX3 HES5

2.04e-055302GO:0072047
GeneOntologyBiologicalProcessrenal tubule development

POU3F3 IRX3 HES5 WNT1

2.32e-05116304GO:0061326
GeneOntologyBiologicalProcessepithelial tube morphogenesis

IRX3 ZIC5 HES5 WNT1 ZIC2 ZIC3

2.73e-05421306GO:0060562
GeneOntologyBiologicalProcesssegmentation

IRX3 HES5 ZIC2 ZIC3

2.93e-05123304GO:0035282
GeneOntologyBiologicalProcesscentral nervous system development

SOX1 POU3F3 SOX21 ZIC5 HES5 WNT1 BHLHE22 ZIC2 ZIC3

3.41e-051197309GO:0007417
GeneOntologyBiologicalProcessnephron epithelium development

POU3F3 IRX3 HES5 WNT1

3.42e-05128304GO:0072009
GeneOntologyBiologicalProcessear development

HEY2 HES5 WNT1 TTC39C ZIC3

5.22e-05285305GO:0043583
GeneOntologyBiologicalProcesspattern specification involved in kidney development

IRX3 HES5

5.70e-058302GO:0061004
GeneOntologyBiologicalProcessrenal system pattern specification

IRX3 HES5

5.70e-058302GO:0072048
GeneOntologyBiologicalProcessembryonic morphogenesis

IRX3 ZIC5 HES5 WNT1 TTC39C ZIC2 ZIC3

5.82e-05713307GO:0048598
GeneOntologyBiologicalProcesssensory organ development

SOX1 HEY2 HES5 WNT1 TTC39C BHLHE22 ZIC3

6.75e-05730307GO:0007423
GeneOntologyBiologicalProcessstem cell differentiation

SOX21 ZIC5 HES5 ZIC2 ZIC3

7.31e-05306305GO:0048863
GeneOntologyBiologicalProcessembryonic epithelial tube formation

IRX3 ZIC5 HES5 ZIC2

7.97e-05159304GO:0001838
GeneOntologyBiologicalProcesstissue morphogenesis

HEY2 IRX3 ZIC5 HES5 WNT1 ZIC2 ZIC3

8.00e-05750307GO:0048729
GeneOntologyBiologicalProcesskidney epithelium development

POU3F3 IRX3 HES5 WNT1

8.57e-05162304GO:0072073
GeneOntologyBiologicalProcessepithelial tube formation

IRX3 ZIC5 HES5 ZIC2

1.10e-04173304GO:0072175
GeneOntologyBiologicalProcessaxial mesoderm development

ZIC2 ZIC3

1.12e-0411302GO:0048318
GeneOntologyBiologicalProcessnephron development

POU3F3 IRX3 HES5 WNT1

1.13e-04174304GO:0072006
GeneOntologyBiologicalProcesscell fate commitment

SOX1 HEY2 HES5 WNT1 BHLHE22

1.17e-04338305GO:0045165
GeneOntologyBiologicalProcesssensory organ morphogenesis

SOX1 WNT1 TTC39C BHLHE22 ZIC3

1.25e-04343305GO:0090596
GeneOntologyBiologicalProcessregulation of inner ear auditory receptor cell differentiation

HEY2 HES5

1.34e-0412302GO:0045607
GeneOntologyBiologicalProcessregulation of mechanoreceptor differentiation

HEY2 HES5

1.34e-0412302GO:0045631
GeneOntologyBiologicalProcessregulation of inner ear receptor cell differentiation

HEY2 HES5

1.34e-0412302GO:2000980
GeneOntologyBiologicalProcesstube formation

IRX3 ZIC5 HES5 ZIC2

1.49e-04187304GO:0035148
GeneOntologyBiologicalProcessmorphogenesis of embryonic epithelium

IRX3 ZIC5 HES5 ZIC2

1.58e-04190304GO:0016331
GeneOntologyBiologicalProcessmesenchyme development

HEY2 ZNF703 ZIC5 ZIC2 ZIC3

1.83e-04372305GO:0060485
GeneOntologyBiologicalProcessneural plate development

ZIC2 ZIC3

1.84e-0414302GO:0001840
GeneOntologyBiologicalProcessneural tube development

ZIC5 HES5 WNT1 ZIC2

2.00e-04202304GO:0021915
GeneOntologyBiologicalProcessmorphogenesis of an epithelium

IRX3 ZIC5 HES5 WNT1 ZIC2 ZIC3

2.29e-04619306GO:0002009
GeneOntologyBiologicalProcesscentral nervous system neuron differentiation

SOX1 HES5 WNT1 BHLHE22

2.63e-04217304GO:0021953
GeneOntologyBiologicalProcessnephron tubule morphogenesis

IRX3 HES5 WNT1

2.71e-0487303GO:0072078
GeneOntologyBiologicalProcessnephron epithelium morphogenesis

IRX3 HES5 WNT1

2.90e-0489303GO:0072088
GeneOntologyBiologicalProcessneuron fate commitment

SOX1 WNT1 BHLHE22

3.09e-0491303GO:0048663
GeneOntologyBiologicalProcessnephron morphogenesis

IRX3 HES5 WNT1

3.09e-0491303GO:0072028
GeneOntologyBiologicalProcessrenal tubule morphogenesis

IRX3 HES5 WNT1

3.30e-0493303GO:0061333
GeneOntologyBiologicalProcessnegative regulation of neuron differentiation

IRX3 SOX21 HES5

3.40e-0494303GO:0045665
GeneOntologyBiologicalProcessanimal organ morphogenesis

SOX1 HEY2 IRX3 HES5 WNT1 TTC39C BHLHE22 ZIC3

3.47e-041269308GO:0009887
GeneOntologyBiologicalProcessmetanephros development

POU3F3 IRX3 HES5

3.51e-0495303GO:0001656
GeneOntologyBiologicalProcessmetanephric nephron tubule development

POU3F3 HES5

4.22e-0421302GO:0072234
GeneOntologyBiologicalProcessanterior/posterior pattern specification

HEY2 HES5 WNT1 ZIC3

4.31e-04247304GO:0009952
GeneOntologyBiologicalProcesssegment specification

IRX3 HES5

4.64e-0422302GO:0007379
GeneOntologyBiologicalProcessinner ear development

HEY2 HES5 WNT1 TTC39C

4.71e-04253304GO:0048839
GeneOntologyBiologicalProcessregulation of neuron differentiation

HEY2 IRX3 SOX21 HES5

4.86e-04255304GO:0045664
GeneOntologyBiologicalProcessmetanephric nephron epithelium development

POU3F3 HES5

5.08e-0423302GO:0072243
GeneOntologyBiologicalProcessnephron tubule formation

IRX3 HES5

5.08e-0423302GO:0072079
GeneOntologyBiologicalProcessparaxial mesoderm development

ZIC2 ZIC3

5.53e-0424302GO:0048339
GeneOntologyBiologicalProcesskidney morphogenesis

IRX3 HES5 WNT1

5.54e-04111303GO:0060993
GeneOntologyBiologicalProcessaxis specification

HEY2 WNT1 ZIC3

5.84e-04113303GO:0009798
GeneOntologyBiologicalProcessregulation of Notch signaling pathway

HEY2 HES5 WNT1

5.99e-04114303GO:0008593
GeneOntologyBiologicalProcessforebrain regionalization

WNT1 BHLHE22

6.01e-0425302GO:0021871
GeneOntologyBiologicalProcessmetanephric tubule development

POU3F3 HES5

6.50e-0426302GO:0072170
GeneOntologyBiologicalProcesstube development

HEY2 POU3F3 IRX3 ZIC5 HES5 WNT1 ZIC2 ZIC3

6.78e-041402308GO:0035295
GeneOntologyBiologicalProcessmetanephric epithelium development

POU3F3 HES5

7.55e-0428302GO:0072207
GeneOntologyBiologicalProcessembryo development

HEY2 IRX3 ZIC5 HES5 WNT1 TTC39C ZIC2 ZIC3

7.98e-041437308GO:0009790
GeneOntologyBiologicalProcessmesenchymal cell differentiation

HEY2 ZNF703 ZIC5 ZIC2

8.49e-04296304GO:0048762
GeneOntologyBiologicalProcesstube morphogenesis

HEY2 IRX3 ZIC5 HES5 WNT1 ZIC2 ZIC3

9.49e-041125307GO:0035239
GeneOntologyBiologicalProcesstelencephalon development

POU3F3 HES5 BHLHE22 ZIC3

1.30e-03332304GO:0021537
GeneOntologyBiologicalProcesspositive regulation of cell population proliferation

HEY2 ZNF703 POU3F3 TNFSF9 HES5 WNT1 INSM1

1.32e-031190307GO:0008284
GeneOntologyBiologicalProcessproximal/distal pattern formation

IRX3 HES5

1.32e-0337302GO:0009954
GeneOntologyBiologicalProcessear morphogenesis

WNT1 TTC39C ZIC3

1.43e-03154303GO:0042471
GeneOntologyBiologicalProcessmesoderm development

IRX3 ZIC2 ZIC3

1.51e-03157303GO:0007498
GeneOntologyBiologicalProcesscardiac conduction system development

HEY2 IRX3

1.54e-0340302GO:0003161
GeneOntologyBiologicalProcesschordate embryonic development

HEY2 ZIC5 HES5 WNT1 ZIC2 ZIC3

1.70e-03906306GO:0043009
GeneOntologyBiologicalProcessembryo development ending in birth or egg hatching

HEY2 ZIC5 HES5 WNT1 ZIC2 ZIC3

1.93e-03929306GO:0009792
GeneOntologyBiologicalProcesskidney development

POU3F3 IRX3 HES5 WNT1

1.97e-03372304GO:0001822
GeneOntologyBiologicalProcessrenal system development

POU3F3 IRX3 HES5 WNT1

2.25e-03386304GO:0072001
GeneOntologyBiologicalProcessmRNA transcription by RNA polymerase II

TAF4 ZIC3

2.59e-0352302GO:0042789
GeneOntologyBiologicalProcessforebrain neuron differentiation

SOX1 HES5

2.69e-0353302GO:0021879
GeneOntologyBiologicalProcesspositive regulation of Notch signaling pathway

HES5 WNT1

2.69e-0353302GO:0045747
GeneOntologyCellularComponentchromatin

SOX1 HEY2 KLF16 POU3F3 DMRTA1 IRX3 TAF4 SOX21 NKX2-4 HES5 BHLHE22

3.35e-0614803011GO:0000785
MousePhenoperinatal lethality, complete penetrance

HEY2 PRDM12 POU3F3 ZIC5 WNT1 INSM1 ZIC2

7.52e-05712227MP:0011089
MousePhenoabnormal cerebellum anterior vermis morphology

WNT1 ZIC3

8.46e-059222MP:0000867
MousePhenoabnormal cerebellum anterior lobe morphology

WNT1 ZIC3

1.06e-0410222MP:0009960
MousePhenoabsent cerebellum

WNT1 ZIC3

1.29e-0411222MP:0000850
MousePhenoabnormal cerebral cortex morphology

POU3F3 ZIC5 BHLHE22 ZIC2 ZIC3

1.31e-04328225MP:0000788
MousePhenoneonatal lethality, complete penetrance

HEY2 PRDM12 POU3F3 ZIC5 WNT1 INSM1

1.34e-04534226MP:0011087
MousePhenoabnormal forebrain morphology

SOX1 POU3F3 ZIC5 WNT1 BHLHE22 INSM1 ZIC2 ZIC3

1.41e-041072228MP:0000783
MousePhenoabnormal telencephalon morphology

SOX1 POU3F3 ZIC5 WNT1 BHLHE22 ZIC2 ZIC3

1.72e-04812227MP:0000787
MousePhenoperinatal lethality

HEY2 PRDM12 POU3F3 ATP6AP1 ZIC5 WNT1 INSM1 ZIC2

2.03e-041130228MP:0002081
MousePhenoabnormal cerebral hemisphere morphology

POU3F3 ZIC5 WNT1 BHLHE22 ZIC2 ZIC3

2.50e-04599226MP:0008540
MousePhenoabnormal limbic system morphology

SOX1 POU3F3 ZIC5 ZIC2 ZIC3

2.54e-04378225MP:0004166
MousePhenoabnormal brain ventricular system morphology

ATP6AP1 SOX21 ZIC5 WNT1 ZIC2

3.04e-04393225MP:0002200
MousePhenoabnormal rhombomere morphology

WNT1 ZIC2

3.17e-0417222MP:0000933
MousePhenoatrial septal defect

HEY2 ZIC2 ZIC3

3.40e-0488223MP:0010403
MousePhenoabnormal neuromere morphology

WNT1 ZIC2

3.56e-0418222MP:0003208
MousePhenoabnormal basal ganglion morphology

SOX1 ZIC5 ZIC3

5.88e-04106223MP:0006007
MousePhenoabnormal neuron number

PRDM12 HES5 BHLHE22 INSM1 ZIC2

6.01e-04456225MP:0008946
MousePhenoabnormal interatrial septum morphology

HEY2 ZIC2 ZIC3

6.04e-04107223MP:0000282
MousePhenoabnormal QRS complex

PRDM12 KLF16 IRX3

6.21e-04108223MP:0003898
MousePhenoanencephaly

ZIC2 ZIC3

6.39e-0424222MP:0001890
MousePhenoright pulmonary isomerism

ZIC2 ZIC3

6.94e-0425222MP:0000531
MousePhenosmall premaxilla

ZIC5 ZIC3

6.94e-0425222MP:0004870
MousePhenoabnormal neural plate morphology

ZIC2 ZIC3

7.51e-0426222MP:0005657
MousePhenoabnormal left lung morphology

ZIC2 ZIC3

8.72e-0428222MP:0009569
MousePhenoright-sided isomerism

ZIC2 ZIC3

1.00e-0330222MP:0000508
MousePhenoright-sided stomach

ZIC2 ZIC3

1.07e-0331222MP:0010808
MousePhenodelayed neural tube closure

ZIC2 ZIC3

1.07e-0331222MP:0002621
MousePhenoabnormal glossopharyngeal ganglion morphology

PRDM12 ZIC5

1.14e-0332222MP:0001096
MousePhenoneonatal lethality

HEY2 PRDM12 POU3F3 ZIC5 WNT1 INSM1

1.16e-03799226MP:0002058
MousePhenoabnormal stomach position or orientation

ZIC2 ZIC3

1.44e-0336222MP:0010807
MousePhenoabnormal cerebellum vermis morphology

WNT1 ZIC3

1.52e-0337222MP:0000864
MousePhenoabnormal premaxilla morphology

ZIC5 ZIC3

1.69e-0339222MP:0002820
MousePhenoabnormal zygomatic bone morphology

POU3F3 ZIC3

1.87e-0341222MP:0005270
DomainSOXp

SOX1 SOX21

2.32e-055292PF12336
DomainSOX_fam

SOX1 SOX21

2.32e-055292IPR022097
Domain-

PRDM12 ZNF703 KLF16 ZIC5 INSM1 ZIC2 ZIC3

6.31e-056792973.30.160.60
DomainZnf_C2H2/integrase_DNA-bd

PRDM12 ZNF703 KLF16 ZIC5 INSM1 ZIC2 ZIC3

7.24e-05694297IPR013087
DomainORANGE

HEY2 HES5

8.32e-059292SM00511
DomainZINC_FINGER_C2H2_2

PRDM12 ZNF703 KLF16 ZIC5 INSM1 ZIC2 ZIC3

1.45e-04775297PS50157
DomainZINC_FINGER_C2H2_1

PRDM12 ZNF703 KLF16 ZIC5 INSM1 ZIC2 ZIC3

1.47e-04777297PS00028
DomainHairy_orange

HEY2 HES5

1.52e-0412292PF07527
DomainOrange_dom

HEY2 HES5

1.52e-0412292IPR003650
DomainZnf_C2H2-like

PRDM12 ZNF703 KLF16 ZIC5 INSM1 ZIC2 ZIC3

1.71e-04796297IPR015880
DomainORANGE

HEY2 HES5

1.80e-0413292PS51054
DomainZnf_C2H2

PRDM12 ZNF703 KLF16 ZIC5 INSM1 ZIC2 ZIC3

1.83e-04805297IPR007087
DomainZnF_C2H2

PRDM12 ZNF703 KLF16 ZIC5 INSM1 ZIC2 ZIC3

1.87e-04808297SM00355
Domainzf-C2H2

PRDM12 KLF16 ZIC5 INSM1 ZIC2 ZIC3

5.84e-04693296PF00096
Domain-

HEY2 HES5 BHLHE22

6.33e-041092934.10.280.10
DomainHLH

HEY2 HES5 BHLHE22

6.67e-04111293PF00010
DomainHLH

HEY2 HES5 BHLHE22

7.58e-04116293SM00353
DomainBHLH

HEY2 HES5 BHLHE22

7.77e-04117293PS50888
DomainbHLH_dom

HEY2 HES5 BHLHE22

7.97e-04118293IPR011598
DomainHomeobox_CS

POU3F3 IRX3 NKX2-4

2.93e-03186293IPR017970
DomainHMG_box

SOX1 SOX21

3.05e-0353292PF00505
DomainHMG

SOX1 SOX21

3.17e-0354292SM00398
DomainHMG_BOX_2

SOX1 SOX21

3.17e-0354292PS50118
Domain-

SOX1 SOX21

3.29e-03552921.10.30.10
DomainHMG_box_dom

SOX1 SOX21

4.56e-0365292IPR009071
DomainHomeobox

POU3F3 IRX3 NKX2-4

5.58e-03234293PF00046
DomainHOMEOBOX_1

POU3F3 IRX3 NKX2-4

5.71e-03236293PS00027
DomainHOX

POU3F3 IRX3 NKX2-4

5.78e-03237293SM00389
DomainHomeobox_dom

POU3F3 IRX3 NKX2-4

5.91e-03239293IPR001356
DomainHOMEOBOX_2

POU3F3 IRX3 NKX2-4

5.91e-03239293PS50071
Domain-

POU3F3 IRX3 NKX2-4

9.40e-032832931.10.10.60
DomainHomeodomain-like

POU3F3 IRX3 NKX2-4

1.44e-02332293IPR009057
PathwayWP_NEURAL_CREST_DIFFERENTIATION

HEY2 ZIC5 HES5 WNT1

7.54e-0697194MM15926
PathwayWP_NEURAL_CREST_DIFFERENTIATION

HEY2 ZIC5 HES5 WNT1

8.86e-06101194M39448
PathwayWP_MESODERMAL_COMMITMENT_PATHWAY

SOX21 ZIC5 ZIC2 ZIC3

4.55e-05153194M39546
PathwayREACTOME_FORMATION_OF_THE_ANTERIOR_NEURAL_PLATE

SOX1 ZIC2

9.40e-0511192M48031
PathwayBIOCARTA_HES_PATHWAY

HEY2 WNT1

1.13e-0412192MM1562
PathwayBIOCARTA_HES_PATHWAY

HEY2 WNT1

1.13e-0412192M22042
PathwayKEGG_MEDICUS_VARIANT_NOTCH_OVEREXPRESSION_TO_NOTCH_SIGNALING_PATHWAY

HEY2 HES5

2.04e-0416192M47424
PathwayREACTOME_NOTCH4_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION

HEY2 HES5

3.22e-0420192M27881
PathwayREACTOME_NOTCH3_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION

HEY2 HES5

5.07e-0425192M27880
PathwayWP_ENDODERM_DIFFERENTIATION

SOX21 ZIC5 ZIC3

8.79e-04143193M39591
PathwayWP_BREAST_CANCER_PATHWAY

HEY2 HES5 WNT1

1.09e-03154193M39739
PathwayREACTOME_DEVELOPMENTAL_BIOLOGY

SOX1 HEY2 POU3F3 WNT1 INSM1 ZIC2 ZIC3

1.84e-031432197M509
PathwayREACTOME_NOTCH1_INTRACELLULAR_DOMAIN_REGULATES_TRANSCRIPTION

HEY2 HES5

1.87e-0348192M611
PathwayREACTOME_SIGNALING_BY_NOTCH3

HEY2 HES5

1.95e-0349192M618
PathwayKEGG_HEDGEHOG_SIGNALING_PATHWAY

WNT1 ZIC2

2.54e-0356192M1053
PathwayREACTOME_SIGNALING_BY_NOTCH1_PEST_DOMAIN_MUTANTS_IN_CANCER

HEY2 HES5

2.72e-0358192M29616
PathwayWP_NOTCH_SIGNALING_WP61

HEY2 HES5

3.00e-0361192M39540
Pubmed

A census of human transcription factors: function, expression and evolution.

SOX1 HEY2 PRDM12 KLF16 POU3F3 DMRTA1 IRX3 SOX21 NKX2-4 HES5 BHLHE22 INSM1 ZIC2

1.91e-13908301319274049
Pubmed

SUMOylation Potentiates ZIC Protein Activity to Influence Murine Neural Crest Cell Specification.

ZIC5 ZIC2 ZIC3

2.32e-09430334638777
Pubmed

Transcriptional regulatory networks in epiblast cells and during anterior neural plate development as modeled in epiblast stem cells.

SOX1 POU3F3 ZIC2 ZIC3

6.63e-092630422992956
Pubmed

Impact of cytosine methylation on DNA binding specificities of human transcription factors.

HEY2 KLF16 DMRTA1 IRX3 ZIC5 HES5 BHLHE22 ZIC3

1.47e-0854430828473536
Pubmed

The expression of the mouse Zic1, Zic2, and Zic3 gene suggests an essential role for Zic genes in body pattern formation.

WNT1 ZIC2 ZIC3

3.23e-0883039070329
Pubmed

Spatiotemporal expression of Zic genes during vertebrate inner ear development.

ZIC5 ZIC2 ZIC3

6.92e-081030323606270
Pubmed

Mouse Zic5 deficiency results in neural tube defects and hypoplasia of cephalic neural crest derivatives.

ZIC5 ZIC2 ZIC3

6.92e-081030315136147
Pubmed

CD spectra show the relational style between Zic-, Gli-, Glis-zinc finger protein and DNA.

ZIC5 ZIC2 ZIC3

6.92e-081030318298960
Pubmed

Lack of association between ZIC2 and ZIC3 genes and the risk of neural tube defects (NTDs) in Hispanic populations.

ZIC2 ZIC3

7.19e-07230212522805
Pubmed

Description of the smallest critical region for Dandy-Walker malformation in chromosome 13 in a girl with a cryptic deletion related to t(6;13)(q23;q32).

ZIC5 ZIC2

7.19e-07230220683983
Pubmed

ZIC2 and ZIC3 promote SWI/SNF recruitment to safeguard progression towards human primed pluripotency.

ZIC2 ZIC3

7.19e-07230239358345
Pubmed

Zic1 and Zic3 regulate medial forebrain development through expansion of neuronal progenitors.

HES5 ZIC2 ZIC3

1.32e-062530317507568
Pubmed

Expression of ZIC family genes in meningiomas and other brain tumors.

ZIC5 ZIC2

2.16e-06330220199689
Pubmed

The role of Zic family zinc finger transcription factors in the proliferation and differentiation of retinal progenitor cells.

ZIC2 ZIC3

2.16e-06330222024047
Pubmed

Genetic variants in ZIC1, ZIC2, and ZIC3 are not major risk factors for neural tube defects in humans.

ZIC2 ZIC3

2.16e-06330214679585
Pubmed

Overlapping and distinct expression domains of Zic2 and Zic3 during mouse gastrulation.

ZIC2 ZIC3

2.16e-06330215261827
Pubmed

The mouse zic gene family. Homologues of the Drosophila pair-rule gene odd-paired.

ZIC2 ZIC3

2.16e-0633028557628
Pubmed

Identification of signaling pathways that specify a subset of migrating enteric neural crest cells at the wavefront in mouse embryos.

HEY2 WNT1 INSM1

2.31e-063030338636517
Pubmed

SOX1 links the function of neural patterning and Notch signalling in the ventral spinal cord during the neuron-glial fate switch.

SOX1 SOX21 HES5

2.56e-063130319723505
Pubmed

Zic4, a zinc-finger transcription factor, is expressed in the developing mouse nervous system.

ZIC2 ZIC3

4.31e-06430215895369
Pubmed

An Evolutionarily Conserved Mesodermal Enhancer in Vertebrate Zic3.

ZIC2 ZIC3

4.31e-06430230297839
Pubmed

Molecular properties of Zic proteins as transcriptional regulators and their relationship to GLI proteins.

ZIC2 ZIC3

4.31e-06430211053430
Pubmed

The basic helix-loop-helix genes Hesr1/Hey1 and Hesr2/Hey2 regulate maintenance of neural precursor cells in the brain.

HEY2 HES5

4.31e-06430212947105
Pubmed

A novel zinc finger protein, zic, is involved in neurogenesis, especially in the cell lineage of cerebellar granule cells.

ZIC2 ZIC3

4.31e-0643027931345
Pubmed

Transcriptional network orchestrating regional patterning of cortical progenitors.

POU3F3 ZIC5 HES5

5.18e-063930334921112
Pubmed

HNF1B controls proximal-intermediate nephron segment identity in vertebrates by regulating Notch signalling components and Irx1/2.

POU3F3 IRX3 HES5

5.60e-064030323362348
Pubmed

Myogenic repressor I-mfa interferes with the function of Zic family proteins.

ZIC2 ZIC3

7.18e-06530215207726
Pubmed

Apoptosis is involved in maintaining the character of the midbrain and the diencephalon roof plate after neural tube closure.

SOX1 WNT1

7.18e-06530232979334
Pubmed

A Zic2-regulated switch in a noncanonical Wnt/βcatenin pathway is essential for the formation of bilateral circuits.

WNT1 ZIC2

1.08e-05630233188033
Pubmed

HeyL promotes neuronal differentiation of neural progenitor cells.

HEY2 HES5

1.08e-05630221259317
Pubmed

Helt, a novel basic-helix-loop-helix transcriptional repressor expressed in the developing central nervous system.

HEY2 HES5

1.08e-05630214764602
Pubmed

Molecular properties of Zic4 and Zic5 proteins: functional diversity within Zic family.

ZIC5 ZIC2

1.08e-05630215465018
Pubmed

Physical and functional interactions between Zic and Gli proteins.

ZIC2 ZIC3

1.08e-05630211238441
Pubmed

Genome-wide meta-analysis of myopia and hyperopia provides evidence for replication of 11 loci.

ZIC5 ZIC2

1.51e-05730225233373
Pubmed

Zic2 patterns binocular vision by specifying the uncrossed retinal projection.

ZIC2 ZIC3

1.51e-05730213678579
Pubmed

The prepattern transcription factor Irx3 directs nephron segment identity.

POU3F3 IRX3

1.51e-05730217875669
Pubmed

Mesp1 controls the chromatin and enhancer landscapes essential for spatiotemporal patterning of early cardiovascular progenitors.

ZIC2 ZIC3

1.51e-05730235817961
Pubmed

Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia.

ZIC5 HES5 INSM1

1.64e-055730335377797
Pubmed

A Novel and Multivalent Role of Pax6 in Cerebellar Development.

IRX3 INSM1

2.01e-05830227581449
Pubmed

Anteriorization of neural fate by inhibitor of beta-catenin and T cell factor (ICAT), a negative regulator of Wnt signaling.

SOX1 IRX3

2.01e-05830215148409
Pubmed

Specification of embryonic stem cell-derived tissues into eye fields by Wnt signaling using rostral diencephalic tissue-inducing culture.

SOX1 IRX3

2.58e-05930227151576
Pubmed

Inhibition of mouse GPM6A expression leads to decreased differentiation of neurons derived from mouse embryonic stem cells.

SOX1 WNT1

2.58e-05930218522499
Pubmed

A genomic atlas of mouse hypothalamic development.

HES5 INSM1 ZIC2 ZIC3

2.85e-0520530420436479
Pubmed

Hesr1 and Hesr2 may act as early effectors of Notch signaling in the developing cochlea.

HEY2 HES5

3.22e-051030218291358
Pubmed

Single-Cell Lineage Tracing Reveals that Oriented Cell Division Contributes to Trabecular Morphogenesis and Regional Specification.

HEY2 IRX3

3.22e-051030227052172
Pubmed

Quantitative single-cell live imaging links HES5 dynamics with cell-state and fate in murine neurogenesis.

SOX1 HES5

3.22e-051030231249377
Pubmed

A role for Zic1 and Zic2 in Myf5 regulation and somite myogenesis.

ZIC2 ZIC3

3.22e-051030221211521
Pubmed

SoxC Transcription Factors Promote Contralateral Retinal Ganglion Cell Differentiation and Axon Guidance in the Mouse Visual System.

HES5 ZIC2

3.22e-051030228215559
Pubmed

Transcription factor Hes1 modulates osteoarthritis development in cooperation with calcium/calmodulin-dependent protein kinase 2.

HEY2 HES5

3.22e-051030225733872
Pubmed

Normal development in mice over-expressing the intracellular domain of DLL1 argues against reverse signaling by DLL1 in vivo.

HEY2 HES5

3.22e-051030224167636
Pubmed

Characterization of Opr deficiency in mouse brain: subtle defects in dorsomedial telencephalon and medioventral forebrain.

ZIC5 ZIC2

3.22e-051030215736266
Pubmed

Wnt1 Role in the Development of the Habenula and the Fasciculus Retroflexus.

SOX1 WNT1

3.22e-051030234722541
Pubmed

Identification of Embryonic Neural Plate Border Stem Cells and Their Generation by Direct Reprogramming from Adult Human Blood Cells.

SOX1 IRX3

3.22e-051030230581079
Pubmed

Fibroblast growth factor 8 organizes the neocortical area map and regulates sensory map topography.

ZIC2 ZIC3

3.94e-051130222623663
Pubmed

Hey2 functions in parallel with Hes1 and Hes5 for mammalian auditory sensory organ development.

HEY2 HES5

3.94e-051130218302773
Pubmed

Integrative genomic analyses on HES/HEY family: Notch-independent HES1, HES3 transcription in undifferentiated ES cells, and Notch-dependent HES1, HES5, HEY1, HEY2, HEYL transcription in fetal tissues, adult tissues, or cancer.

HEY2 HES5

3.94e-051130217611704
Pubmed

Effects of varying Notch1 signal strength on embryogenesis and vasculogenesis in compound mutant heterozygotes.

HEY2 HES5

3.94e-051130220346184
Pubmed

Isolation and genetic mapping of two novel members of the murine Wnt gene family, Wnt11 and Wnt12, and the mapping of Wnt5a and Wnt7a.

WNT1 GLUD2

4.72e-05123027896292
Pubmed

Clonal and molecular analysis of the prospective anterior neural boundary in the mouse embryo.

SOX1 IRX3

4.72e-051230222186731
Pubmed

Two Notch ligands, Dll1 and Jag1, are differently restricted in their range of action to control neurogenesis in the mammalian spinal cord.

HES5 BHLHE22

5.58e-051330221124801
Pubmed

Twenty pairs of sox: extent, homology, and nomenclature of the mouse and human sox transcription factor gene families.

SOX1 SOX21

5.58e-051330212194848
Pubmed

Progenitor cell diversity in the developing mouse neocortex.

POU3F3 HES5

5.58e-051330233649223
Pubmed

In vivo overactivation of the Notch signaling pathway in the developing cochlear epithelium.

HEY2 HES5

5.58e-051330226209882
Pubmed

Notch signaling is a novel regulator of visceral smooth muscle cell differentiation in the murine ureter.

HEY2 HES5 INSM1

5.65e-058630335103284
Pubmed

Insights into olfactory ensheathing cell development from a laser-microdissection and transcriptome-profiling approach.

HEY2 POU3F3 HES5

6.47e-059030332857879
Pubmed

Fbxw7-dependent degradation of Notch is required for control of "stemness" and neuronal-glial differentiation in neural stem cells.

HEY2 HES5

6.50e-051430221349854
Pubmed

Proneural bHLH and Brn proteins coregulate a neurogenic program through cooperative binding to a conserved DNA motif.

POU3F3 INSM1

6.50e-051430217141158
Pubmed

Developmental diversification of cortical inhibitory interneurons.

SOX21 HES5 INSM1

6.68e-059130329513653
Pubmed

NOTCH1 is required for regeneration of Clara cells during repair of airway injury.

HEY2 HES5

7.50e-051530222331706
Pubmed

The disintegrin/metalloproteinase Adam10 is essential for epidermal integrity and Notch-mediated signaling.

HEY2 HES5

7.50e-051530221205794
Pubmed

Insulinoma-associated 1 has a panneurogenic role and promotes the generation and expansion of basal progenitors in the developing mouse neocortex.

POU3F3 INSM1

7.50e-051530218940587
Pubmed

Mouse Fbw7/Sel-10/Cdc4 is required for notch degradation during vascular development.

HEY2 HES5

7.50e-051530214672936
Pubmed

Anterior neural plate regionalization in cripto null mutant mouse embryos in the absence of node and primitive streak.

IRX3 WNT1

7.50e-051530214651936
Pubmed

Phylogenetic and expression analysis of the basic helix-loop-helix transcription factor gene family: genomic approach to cellular differentiation.

HEY2 HES5 BHLHE22

8.33e-059830318557763
Pubmed

Mind bomb1 is a ubiquitin ligase essential for mouse embryonic development and Notch signaling.

HEY2 HES5

8.57e-051630216061358
Pubmed

Replacement of related POU transcription factors leads to severe defects in mouse forebrain development.

POU3F3 WNT1

8.57e-051630219527706
Pubmed

Genetic ablation reveals that the roof plate is essential for dorsal interneuron specification.

WNT1 ZIC2

8.57e-051630210693795
Pubmed

New semidominant mutations that affect mouse development.

ZIC2 ZIC3

8.57e-051630215384171
Pubmed

Mastermind-like 1 (MamL1) and mastermind-like 3 (MamL3) are essential for Notch signaling in vivo.

HEY2 HES5

8.57e-051630222069191
Pubmed

Persistent and high levels of Hes1 expression regulate boundary formation in the developing central nervous system.

HES5 WNT1

8.57e-051630216728479
Pubmed

Cooperative functions of Hes/Hey genes in auditory hair cell and supporting cell development.

HEY2 HES5

8.57e-051630221300049
Pubmed

A genome-wide screen for spatially restricted expression patterns identifies transcription factors that regulate glial development.

IRX3 SOX21 HES5

9.39e-0510230319741146
Pubmed

DNA sequence and analysis of human chromosome 18.

TMEM200C TTC39C

9.70e-051730216177791
Pubmed

Spatio-temporal expression of Sox genes in murine palatogenesis.

SOX1 SOX21

9.70e-051730227241892
Pubmed

Gamma-secretase activation of notch signaling regulates the balance of proximal and distal fates in progenitor cells of the developing lung.

HEY2 HES5

9.70e-051730218694942
Pubmed

Nuclear factor one B regulates neural stem cell differentiation and axonal projection of corticofugal neurons.

HES5 BHLHE22

9.70e-051730223749646
Pubmed

Segmental expression of Notch and Hairy genes in nephrogenesis.

HEY2 HES5

9.70e-051730215821257
Pubmed

Sox21 promotes hippocampal adult neurogenesis via the transcriptional repression of the Hes5 gene.

SOX21 HES5

9.70e-051730222956844
Pubmed

Zic2 and Zic3 synergistically control neurulation and segmentation of paraxial mesoderm in mouse embryo.

ZIC2 ZIC3

1.09e-041830217490632
Pubmed

Lunatic fringe null female mice are infertile due to defects in meiotic maturation.

HEY2 HES5

1.09e-041830215659488
Pubmed

Expression of Sox genes in tooth development.

SOX1 SOX21

1.09e-041830226864488
Pubmed

Analyses with double knockouts of the Bmpr1a and Bmpr1b genes demonstrate that BMP signaling is involved in the formation of precerebellar mossy fiber nuclei derived from the rhombic lip.

WNT1 ZIC2

1.09e-041830231869353
Pubmed

Presenilin enhancer 2 is crucial for the transition of apical progenitors into neurons but into not basal progenitors in the developing hippocampus.

HEY2 HES5

1.22e-041930235575074
Pubmed

PLZF regulates fibroblast growth factor responsiveness and maintenance of neural progenitors.

IRX3 BHLHE22

1.22e-041930224115909
Pubmed

Minimization of exogenous signals in ES cell culture induces rostral hypothalamic differentiation.

SOX1 IRX3

1.22e-041930218697938
Pubmed

Proteolysis of methylated SOX2 protein is regulated by L3MBTL3 and CRL4DCAF5 ubiquitin ligase.

SOX1 SOX21

1.22e-041930230442713
Pubmed

Fgf15 regulates thalamic development by controlling the expression of proneural genes.

HES5 WNT1

1.22e-041930226311466
Pubmed

The Wnt/beta-catenin pathway modulates vascular remodeling and specification by upregulating Dll4/Notch signaling.

HEY2 WNT1

1.22e-041930220627076
Pubmed

SOX2 is a dose-dependent regulator of retinal neural progenitor competence.

SOX1 HES5

1.22e-041930216651659
Pubmed

Identification of early-responsive genes correlated to valproic acid-induced neural tube defects in mice.

ZIC5 ZIC2

1.22e-041930215799026
CytobandEnsembl 112 genes in cytogenetic band chr13q32

SOX21 ZIC5 ZIC2

3.45e-0596303chr13q32
CytobandEnsembl 112 genes in cytogenetic band chr20p11

NKX2-4 INSM1

4.51e-03153302chr20p11
GeneFamilySRY-boxes

SOX1 SOX21

1.77e-0419192757
GeneFamilyBasic helix-loop-helix proteins

HEY2 HES5 BHLHE22

1.98e-04110193420
GeneFamilyZinc fingers C2H2-type|ZF class homeoboxes and pseudogenes

PRDM12 KLF16 ZIC5 ZIC2 ZIC3

7.12e-0471819528
GeneFamilyAnkyrin repeat domain containing

ANKRD34A ASPG

2.63e-02242192403
CoexpressionDAWSON_METHYLATED_IN_LYMPHOMA_TCL1

SOX1 IRX3 BHLHE22 ZIC3

6.07e-0759304M1238
CoexpressionDAWSON_METHYLATED_IN_LYMPHOMA_TCL1

SOX1 IRX3 BHLHE22 ZIC3

6.07e-0759304MM528
CoexpressionSHEPARD_CRASH_AND_BURN_MUTANT_DN

POU3F3 SOX21 HES5 INSM1 ZIC2

2.40e-06191305M2148
CoexpressionBENPORATH_SUZ12_TARGETS

SOX1 PRDM12 ZNF703 IRX3 SOX21 WNT1 BHLHE22 INSM1

1.55e-051035308M9898
CoexpressionMEISSNER_BRAIN_HCP_WITH_H3K4ME3_AND_H3K27ME3

SOX1 IRX3 SOX21 ZIC5 WNT1 BHLHE22 ZIC2 ZIC3

2.03e-051074308M1941
CoexpressionE2F3_UP.V1_UP

HEY2 ZNF703 KLF16 ZIC2

6.33e-05190304M2706
CoexpressionGSE2706_LPS_VS_R848_AND_LPS_8H_STIM_DC_DN

IRX3 DEPDC7 TNFSF9 BHLHE22

7.14e-05196304M4728
CoexpressionGSE41176_WT_VS_TAK1_KO_ANTI_IGM_STIM_BCELL_3H_UP

ZNF703 TNFSF9 ZIC5 INSM1

7.42e-05198304M9938
CoexpressionSHEPARD_BMYB_MORPHOLINO_DN

POU3F3 SOX21 HES5 BHLHE22

8.02e-05202304M11840
CoexpressionSHEPARD_BMYB_TARGETS

POU3F3 SOX21 HES5

8.99e-0576303M15973
CoexpressionBENPORATH_EED_TARGETS

SOX1 PRDM12 IRX3 SOX21 WNT1 BHLHE22 ZIC2

1.55e-041059307M7617
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_100

IRX3 SOX21 ZIC5 HES5 WNT1 ZIC2 ZIC3

6.70e-1198307Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_100
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_100

SOX21 ZIC5 HES5 WNT1 ZIC2 ZIC3

5.08e-09100306Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_100
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500

POU3F3 DMRTA1 IRX3 SOX21 ZIC5 HES5 INSM1 ZIC2 ZIC3

1.84e-08498309Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Ectoderm_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_1000

SOX1 PRDM12 DMRTA1 SOX21 HES5 WNT1 TMEM200C INSM1 ZIC2 ZIC3 SKIDA1

5.22e-089913011PCBC_ECTO_fibroblast_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Ectoderm_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_500

DMRTA1 HES5 WNT1 TMEM200C INSM1 ZIC2 ZIC3 SKIDA1

2.71e-07487308PCBC_ECTO_blastocyst_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Ectoderm_top-relative-expression-ranked_500

SOX1 DMRTA1 SOX21 HES5 WNT1 TMEM200C INSM1 SKIDA1

3.07e-07495308PCBC_ECTO_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Ectoderm_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_500

SOX1 DMRTA1 SOX21 HES5 WNT1 TMEM200C INSM1 SKIDA1

3.17e-07497308PCBC_ECTO_fibroblast_500
CoexpressionAtlasEctoderm Differentiated Cells-method_mRNA_vs_Ectoderm Differentiated Cells-method_NA-Confounder_removed-fold2.0_adjp0.05

SOX1 DMRTA1 SOX21 HES5

1.05e-0655304PCBC_ratio_ECTO_from-mRNA_vs_ECTO_from-ESC_cfr-2X-p05
CoexpressionAtlasEctoderm Differentiated Cells-reprogram_OSKM-L_vs_Ectoderm Differentiated Cells-reprogram_NA-Confounder_removed-fold2.0_adjp0.05

SOX1 DMRTA1 SOX21 HES5

1.05e-0655304PCBC_ratio_ECTO_from-OSKM-L_vs_ECTO_from-ESC_cfr-2X-p05
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_2500_k-means-cluster#3

SOX1 PRDM12 DMRTA1 IRX3 HES5 WNT1 BHLHE22 INSM1 SKIDA1

1.66e-06848309ratio_ECTO_vs_SC_2500_K3
CoexpressionAtlascerebral cortex

SOX1 ANKRD34A POU3F3 SOX21 ZIC5 HES5 WNT1 TMEM200C BHLHE22 ZIC2 ZIC3

2.03e-0614283011cerebral cortex
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_500

POU3F3 DMRTA1 SOX21 HES5 INSM1 ZIC2 ZIC3

4.46e-06493307Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_500
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_500

ZNF703 DMRTA1 IRX3 HES5 WNT1 INSM1 SKIDA1

4.59e-06495307PCBC_ratio_ECTO_vs_SC_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_top-relative-expression-ranked_500

SOX1 POU3F3 HES5 WNT1 TMEM200C INSM1 ZIC3

4.65e-06496307PCBC_EB_500
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_500

IRX3 SOX21 ZIC5 HES5 WNT1 ZIC2 ZIC3

4.65e-06496307Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_500
CoexpressionAtlasEB amniotic fluid MSC_vs_EB blastocyst-Confounder_removed-fold2.0_adjp0.05

ZNF703 POU3F3 DMRTA1 ZIC5 HES5 INSM1 ZIC2 ZIC3

5.45e-06727308PCBC_ratio_EB amniotic fluid MSC_vs_EB blastocyst_cfr-2X-p05
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000

POU3F3 DMRTA1 IRX3 SOX21 ZIC5 HES5 INSM1 ZIC2 ZIC3

5.87e-06989309Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Ectoderm_top-relative-expression-ranked_1000

SOX1 DMRTA1 SOX21 ZIC5 HES5 WNT1 TMEM200C INSM1 SKIDA1

5.92e-06990309PCBC_ECTO_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_100

POU3F3 SOX21 HES5 ZIC3

1.11e-0599304Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_100
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_100

POU3F3 DMRTA1 SOX21 HES5

1.16e-05100304Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_100
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_100

DMRTA1 SOX21 ZIC2 ZIC3

1.16e-05100304Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_100
CoexpressionAtlasDevelopingGonad_e11.5_ovary + mesonephros_emap-3226_k-means-cluster#3_top-relative-expression-ranked_1000

POU3F3 HES5 INSM1 ZIC3

1.68e-05110304gudmap_developingGonad_e11.5_ovary + mesonephros_k3_1000
CoexpressionAtlasDevelopingGonad_e11.5_testes_emap-3226_k-means-cluster#5_top-relative-expression-ranked_500

POU3F3 INSM1 ZIC3

3.96e-0547303gudmap_developingGonad_e11.5_testes_k5_500
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_500_k-means-cluster#1

DMRTA1 HES5 WNT1 INSM1 SKIDA1

4.11e-05279305ratio_ECTO_vs_SC_500_K1
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_1000_k-means-cluster#3

PRDM12 DMRTA1 HES5 WNT1 INSM1 SKIDA1

4.36e-05471306ratio_ECTO_vs_SC_1000_K3
CoexpressionAtlasECTO blastocyst_vs_ECTO UCB CD34+Z-Confounder_removed-fold2.0_adjp0.05

ZNF703 IRX3 ZIC5 WNT1 ZIC2

4.48e-05284305PCBC_ratio_ECTO blastocyst_vs_ECTO UCB CD34+Z_cfr-2X-p05
CoexpressionAtlasFacebaseRNAseq_e10.5_Medial Nasal Eminence_top-relative-expression-ranked_500_k-means-cluster#2

POU3F3 HES5 INSM1

4.49e-0549303Facebase_RNAseq_e10.5_Medial Nasal Eminence_500_K2
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Ectoderm_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_1000

DMRTA1 HES5 WNT1 TMEM200C INSM1 ZIC2 ZIC3 SKIDA1

4.59e-05976308PCBC_ECTO_blastocyst_1000
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_1000

PRDM12 ZNF703 DMRTA1 IRX3 HES5 WNT1 INSM1 SKIDA1

4.93e-05986308PCBC_ratio_ECTO_vs_SC_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Non-Floor Plate Neural Epithelium_top-relative-expression-ranked_500_k-means-cluster#2

SOX21 ZIC5 HES5 ZIC3

4.98e-05145304Facebase_RNAseq_e8.5_Non-Floor Plate Neural Epithelium_500_K2
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_1000

POU3F3 IRX3 SOX21 ZIC5 HES5 WNT1 ZIC2 ZIC3

5.11e-05991308Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Non-Floor Plate Neural Epithelium_top-relative-expression-ranked_500

DMRTA1 SOX21 ZIC5 HES5 ZIC2 ZIC3

5.37e-05489306Facebase_RNAseq_e8.5_Non-Floor Plate Neural Epithelium_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_500

SOX1 POU3F3 WNT1 TMEM200C INSM1 ZIC3

5.81e-05496306PCBC_EB_blastocyst_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_500

SOX21 ZIC5 HES5 WNT1 ZIC2 ZIC3

5.81e-05496306Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_500
CoexpressionAtlasEctoderm Differentiated Cells_vs_Endoderm Differentiated Cells-Confounder_removed-fold2.0_adjp0.05

SOX1 ZNF703 DMRTA1 IRX3 SOX21 HES5 WNT1 SKIDA1

9.07e-051075308PCBC_ratio_ECTO_vs_DE_cfr-2X-p05
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_2500_k-means-cluster#3

ANKRD34A PRDM12 ZNF703 POU3F3 HES5 WNT1 BHLHE22 INSM1

1.03e-041094308ratio_EB_vs_SC_2500_K3
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_500_k-means-cluster#2

ZIC5 HES5 ZIC3

1.36e-0471303Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_500_K2
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_1000_k-means-cluster#3

ZIC5 WNT1 ZIC2

1.42e-0472303Facebase_RNAseq_e8.5_Paraxial Mesoderm_1000_K3
CoexpressionAtlasAravindRamakr_StemCell-LF_top-relative-expression-ranked_2500_k-means-cluster#5

DMRTA1 SOX21 ZIC5 TMEM200C ZIC2 ZIC3 SKIDA1 CCNP

1.47e-041152308Arv_SC-LF_2500_K5
CoexpressionAtlasDevelopingGonad_e11.5_ovary + mesonephros_emap-3226_k-means-cluster#2_top-relative-expression-ranked_100

INSM1 ZIC3

1.49e-0413302gudmap_developingGonad_e11.5_ovary + mesonephros_k2_100
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#2

ZIC5 HES5 ZIC3

1.87e-0479303Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K2
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#5

TAF4 ZIC5 HES5 ZIC3

1.90e-04205304Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K5
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#2

TAF4 SOX21 ZIC5 HES5 ZIC3

2.11e-04395305Facebase_RNAseq_e8.5_Floor Plate_2500_K2
CoexpressionAtlasDevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#4_top-relative-expression-ranked_200

INSM1 ZIC3

2.29e-0416302gudmap_developingGonad_e12.5_ovary_k4_200
CoexpressionAtlasDevelopingGonad_e11.5_testes_emap-3226_k-means-cluster#1_top-relative-expression-ranked_1000

POU3F3 INSM1 ZIC3

2.66e-0489303gudmap_developingGonad_e11.5_testes_k1_1000
CoexpressionAtlasDevelopingGonad_e11.5_testes and mesonephros_emap-3226_k-means-cluster#2_top-relative-expression-ranked_1000

POU3F3 INSM1 ZIC3

2.75e-0490303gudmap_developingGonad_e11.5_testes and mesonephros_k2_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#4

POU3F3 DMRTA1 SOX21 INSM1

2.99e-04231304Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K4
CoexpressionAtlasEctoderm Differentiated Cells_vs_Mesoderm Day 5-Confounder_removed-fold2.0_adjp0.05

SOX1 ZNF703 DMRTA1 SOX21 HES5 WNT1 SKIDA1

3.22e-04967307PCBC_ratio_ECTO_vs_MESO-5_cfr-2X-p05
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Mesoderm_top-relative-expression-ranked_1000

DMRTA1 ZIC5 TMEM200C BHLHE22 ZIC2 ZIC3 SKIDA1

3.37e-04974307PCBC_MESO-5_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_100

ZIC5 WNT1 ZIC2

3.43e-0497303Facebase_RNAseq_e8.5_Paraxial Mesoderm_100
CoexpressionAtlasFacebaseRNAseq_e8.5_Non-Floor Plate Neural Epithelium_top-relative-expression-ranked_100

SOX21 ZIC2 ZIC3

3.54e-0498303Facebase_RNAseq_e8.5_Non-Floor Plate Neural Epithelium_100
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000

POU3F3 DMRTA1 SOX21 HES5 INSM1 ZIC2 ZIC3

3.56e-04983307Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000
CoexpressionAtlasDevelopingGonad_e11.5_testes_emap-3226_k-means-cluster#4_top-relative-expression-ranked_200

INSM1 ZIC3

3.61e-0420302gudmap_developingGonad_e11.5_testes_k4_200
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_induced-Ectoderm_top-relative-expression-ranked_100

DMRTA1 HES5 WNT1

3.64e-0499303PCBC_ECTO_100
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_100

ZNF703 HES5 WNT1

3.75e-04100303PCBC_ratio_ECTO_vs_SC_100
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_1000

SOX1 POU3F3 HES5 WNT1 TMEM200C INSM1 ZIC3

3.76e-04992307PCBC_EB_blastocyst_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_top-relative-expression-ranked_1000

SOX1 POU3F3 HES5 WNT1 TMEM200C INSM1 ZIC3

3.81e-04994307PCBC_EB_1000
CoexpressionAtlasFacebaseRNAseq_e8.5_Non-Floor Plate Neural Epithelium_top-relative-expression-ranked_1000_k-means-cluster#2

SOX21 ZIC5 HES5 ZIC3

3.92e-04248304Facebase_RNAseq_e8.5_Non-Floor Plate Neural Epithelium_1000_K2
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_500

POU3F3 SOX21 HES5 INSM1 ZIC3

5.26e-04482305Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_500
CoexpressionAtlasDevelopingGonad_e11.5_ovary + mesonephros_emap-3226_k-means-cluster#4_top-relative-expression-ranked_200

INSM1 ZIC3

5.67e-0425302gudmap_developingGonad_e11.5_ovary + mesonephros_k4_200
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_inducedDefinitiveEndoderm_fromFibroblast-derived-iPSC_top-relative-expression-ranked_500

DMRTA1 TMEM200C BHLHE22 ZIC2 ZIC3

5.78e-04492305PCBC_DE_fibroblast_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_500

POU3F3 WNT1 TMEM200C INSM1 ZIC3

6.05e-04497305PCBC_EB_fibroblast_500
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500

ZNF703 POU3F3 HES5 WNT1 INSM1

6.10e-04498305PCBC_ratio_EB_vs_SC_500
CoexpressionAtlase9.5_OticVesic_top-relative-expression-ranked_500_3

HES5 WNT1

6.14e-0426302Facebase_ST1_e9.5_OticVesic_500_3
CoexpressionAtlasFacebaseRNAseq_e10.5_Medial Nasal Eminence_top-relative-expression-ranked_1000_k-means-cluster#5

POU3F3 HES5 INSM1

7.03e-04124303Facebase_RNAseq_e10.5_Medial Nasal Eminence_1000_K5
CoexpressionAtlasEctoderm Differentiated Cells_vs_Pluripotent Stem Cells-Confounder_removed-fold2.0_adjp0.05

SOX1 ZNF703 DMRTA1 IRX3 SOX21 HES5 WNT1 SKIDA1

7.52e-041466308PCBC_ratio_ECTO_vs_SC_cfr-2X-p05
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_1000_k-means-cluster#1

ZIC5 HES5 ZIC3

7.54e-04127303Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_1000_K1
CoexpressionAtlasDevelopingGonad_e14.5_ ovary_emap-6699_k-means-cluster#3_top-relative-expression-ranked_200

DMRTA1 IRX3

8.75e-0431302gudmap_developingGonad_e14.5_ ovary_200_k3
CoexpressionAtlasECTO fibroblast_vs_ECTO blastocyst-Confounder_removed-fold2.0_adjp0.05

SOX21 HES5

9.32e-0432302PCBC_ratio_ECTO fibroblast_vs_ECTO blastocyst_cfr-2X-p05
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5

POU3F3 DMRTA1 IRX3 SOX21 PROSER3 INSM1

9.36e-04831306Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_500_k-means-cluster#4

POU3F3 SOX21 INSM1

9.39e-04137303Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_500_K4
CoexpressionAtlasECTO blastocyst_vs_ECTO bone marrow-Confounder_removed-fold2.0_adjp0.05

IRX3 WNT1 TMEM200C

1.06e-03143303PCBC_ratio_ECTO blastocyst_vs_ECTO bone marrow_cfr-2X-p05
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

POU3F3 DMRTA1 SOX21 INSM1

1.12e-03328304Facebase_RNAseq_e10.5_Neural Epithelium Overlying Lateral Eminence_1000_K2
CoexpressionAtlase9.5_NeuroEpith_OverFaceMesench_top-relative-expression-ranked_500

IRX3 SOX21 HES5 WNT1

1.30e-03342304Facebase_ST1_e9.5_NeuroEpith_OverFaceMesench_500
CoexpressionAtlasEB blastocyst_vs_EB bone marrow-Confounder_removed-fold2.0_adjp0.05

ZIC5 WNT1 ZIC2 ZIC3

1.34e-03345304PCBC_ratio_EB blastocyst_vs_EB bone marrow_cfr-2X-p05
CoexpressionAtlasDevelopingKidney_e15.5_stage III -IV renal corpusc_emap-27945_k-means-cluster#5_top-relative-expression-ranked_500

POU3F3 HES5

1.46e-0340302gudmap_developingKidney_e15.5_stage III -IV renal corpusc_500_k5
CoexpressionAtlasDevelopingKidney_e12.5_renal vesicle_emap-27679_top-relative-expression-ranked_200

POU3F3 IRX3 HES5

1.49e-03161303gudmap_developingKidney_e12.5_renal vesicle_200
CoexpressionAtlasDevelopingKidney_e15.5_S-shaped body_emap-27855_top-relative-expression-ranked_200

POU3F3 IRX3 HES5

1.52e-03162303gudmap_developingKidney_e15.5_S-shaped body_200
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_500_k-means-cluster#2

WNT1 ZIC2

1.53e-0341302Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_500_K2
CoexpressionAtlase10.5_NeuroEpith_LateralEmin_top-relative-expression-ranked_500

SOX21 DEPDC7 HES5 INSM1

1.54e-03358304Facebase_ST1_e10.5_NeuroEpith_LateralEmin_500
CoexpressionAtlasDevelopingKidney_e15.5_S-shaped body_emap-27855_k-means-cluster#4_top-relative-expression-ranked_200

IRX3 HES5

1.60e-0342302gudmap_developingKidney_e15.5_S-shaped body_200_k4
CoexpressionAtlase10.5_NeuroEpith_LateralEmin_top-relative-expression-ranked_250

DEPDC7 HES5 INSM1

1.84e-03173303Facebase_ST1_e10.5_NeuroEpith_LateralEmin_250
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#1

ZIC5 HES5 ZIC3

1.96e-03177303Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K1
CoexpressionAtlasFacebaseRNAseq_e8.5_Paraxial Mesoderm_top-relative-expression-ranked_500_k-means-cluster#1

WNT1 ZIC2

2.01e-0347302Facebase_RNAseq_e8.5_Paraxial Mesoderm_500_K1
CoexpressionAtlasFacebaseRNAseq_e8.5_Non-Floor Plate Neural Epithelium_top-relative-expression-ranked_1000

DMRTA1 SOX21 ZIC5 HES5 ZIC2 ZIC3

2.14e-03976306Facebase_RNAseq_e8.5_Non-Floor Plate Neural Epithelium_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_inducedDefinitiveEndoderm_fromFibroblast-derived-iPSC_top-relative-expression-ranked_1000

DMRTA1 TMEM200C BHLHE22 ZIC2 ZIC3 SKIDA1

2.15e-03977306PCBC_DE_fibroblast_1000
CoexpressionAtlasECTO amniotic fluid MSC_vs_ECTO blastocyst-Confounder_removed-fold2.0_adjp0.05

SOX1 DMRTA1 SOX21

2.15e-03183303PCBC_ratio_ECTO amniotic fluid MSC_vs_ECTO blastocyst_cfr-2X-p05
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_inducedDefinitiveEndoderm_fromBlastocyst-derived-iPSC_top-relative-expression-ranked_1000

DMRTA1 TMEM200C BHLHE22 ZIC2 ZIC3 CCNP

2.19e-03981306PCBC_DE_blastocyst_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_1000

POU3F3 HES5 WNT1 TMEM200C INSM1 ZIC3

2.25e-03986306PCBC_EB_fibroblast_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Central Eminence_top-relative-expression-ranked_1000

SOX21 ZIC5 HES5 WNT1 ZIC2 ZIC3

2.25e-03986306Facebase_RNAseq_e10.5_Neural Epithelium Overlying Central Eminence_1000
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_1000

ZNF703 POU3F3 IRX3 HES5 WNT1 INSM1

2.34e-03994306PCBC_ratio_EB_vs_SC_1000
CoexpressionAtlasAravindRamakr_StemCell-LF_top-relative-expression-ranked_1000_k-means-cluster#3

ZIC5 TMEM200C ZIC2 ZIC3 CCNP

2.36e-03675305Arv_SC-LF_1000_K3
CoexpressionAtlasECTO blastocyst_vs_ECTO cord blood-Confounder_removed-fold2.0_adjp0.05

IRX3 HES5 WNT1

2.36e-03189303PCBC_ratio_ECTO blastocyst_vs_ECTO cord blood_cfr-2X-p05
CoexpressionAtlasDevelopingKidney_e12.5_renal vesicle_emap-27679_k-means-cluster#2_top-relative-expression-ranked_200

IRX3 HES5

2.45e-0352302gudmap_developingKidney_e12.5_renal vesicle_200_k2
CoexpressionAtlasDevelopingGonad_e12.5_ovary_emap-28876_top-relative-expression-ranked_500

DMRTA1 IRX3 INSM1 ZIC3

2.50e-03409304gudmap_developingGonad_e12.5_ovary_500
CoexpressionAtlase10.5_NeuroEpith_CentrlOverEmin_top-relative-expression-ranked_500

SOX21 DEPDC7 HES5 WNT1

2.52e-03410304Facebase_ST1_e10.5_NeuroEpith_CentrlOverEmin_500
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_1000_k-means-cluster#5

POU3F3 HES5 WNT1 INSM1

2.66e-03416304ratio_EB_vs_SC_1000_K5
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_1000_k-means-cluster#5

POU3F3 IRX3 SOX21

2.93e-03204303Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_1000_K5
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_500_k-means-cluster#3

POU3F3 WNT1 INSM1

2.93e-03204303ratio_EB_vs_SC_500_K3
CoexpressionAtlasMesoderm Day 30-method_NA_vs_Mesoderm Day 30-method_episomal-Confounder_removed-fold2.0_adjp0.05

HES5 ZIC2 ZIC3

3.05e-03207303PCBC_ratio_MESO-30_from-ESC_vs_MESO-30_from-episomal_cfr-2X-p05
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neuron_precursor|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX1 POU3F3 SOX21 INSM1 ZIC3

1.42e-071843057712f2e1fae5cdde2d4e355b860dc8536b28e4f6
ToppCellfacs-Brain_Non-Myeloid-Cortex-24m-Macroglial-astrocyte|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF703 ASPG HES5 TMEM200C

5.73e-06176304ac3dc44755280e36c0947b6de3cd639dc17de8b6
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neuron_precursor-Neuroblast|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

POU3F3 SOX21 INSM1 ZIC3

5.86e-061773046f3b254e56e722cc23495b49e99a4abce0243cb3
ToppCelldroplet-Heart-4Chambers-21m-Mesenchymal-nan|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HEY2 TMEM200C RSBN1L BHLHE22

6.12e-06179304b44e2d53b82c3c141bfc6539054b19708200a0d9
ToppCellPCW_07-8.5-Epithelial-Epithelial_neuroendo-epi_neuroendocrine2[NE2]_(12)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

SOX1 SOX21 INSM1 ZIC2

7.13e-06186304c7983281a290201567b398e9ea6baddb96c692bb
ToppCellfacs-Trachea-18m-Mesenchymal-fibroblast-fibroblast_of_trachea-|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SOX1 ZIC5 ZIC2 SKIDA1

7.13e-06186304bdc87e4631a8ea73e262e541aa84a28f24c94b00
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ZNF703 POU3F3 IRX3 CCNP

7.28e-061873049225caf66e06ebe57e90d677122acb6498607f36
ToppCellPrimary_Visual_cortex_(V1C)-Non-neuronal-Macroglial-Astro|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX21 ZIC5 HES5 ZIC2

7.75e-0619030478cc6c28b31de041c24175a98f47da256ecc15a2
ToppCellPrimary_Visual_cortex_(V1C)-Non-neuronal-Macroglial-Astro-Astrocyte|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX21 ZIC5 HES5 ZIC2

7.75e-06190304e67d9400467b438592690b23d681e6c2fb8f09fd
ToppCellSkin-Mesangial|Skin / Skin and Kidney Cells in Lupus Nephritis Patients.

SOX1 HEY2 ZIC5 WNT1

9.30e-06199304bcb78838a91cc7828680fb413fbacdb091c5fac0
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW10-Macroglial|GW10 / Sample Type, Dataset, Time_group, and Cell type.

SOX1 HEY2 SOX21 HES5

9.49e-06200304ef222dc4a205d670172dae74990bdb952ac92e5b
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW10-Macroglial-Astrocyte|GW10 / Sample Type, Dataset, Time_group, and Cell type.

SOX1 HEY2 SOX21 HES5

9.49e-0620030498a994692440cb4f505b050276f0c8022c814a21
ToppCellTCGA-Endometrium-Primary_Tumor-Endometrial_Adenocarcinoma-Mixed_Serous_and_Endometrioid-1|TCGA-Endometrium / Sample_Type by Project: Shred V9

SOX1 SOX21 ZIC3

6.28e-05115303c724e8b1fddcefdaa8d247aaff68c986538068f7
ToppCellThalamus|World / BrainAtlas - Mouse McCarroll V32

ZIC5 ZIC2 ZIC3

6.44e-051163035ddfb2dd5459ff6d7ae38163a38eae64fda283b7
ToppCellfrontal_cortex-Non-neuronal-oligodendrocyte-Oligo-OPC_Pdgfra_Grm5|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

DMRTA1 SOX21 NKX2-4

9.67e-0513330363d2f096ae47d9b587acc6c5fbd346e5e58842b8
ToppCellTCGA-Bone_and_Soft_Tissue-Primary_Tumor-Sarcoma-Monophasic_Synovial_Sarcoma|TCGA-Bone_and_Soft_Tissue / Sample_Type by Project: Shred V9

ZIC5 HES5 ZIC2

1.06e-04137303576ca865b8e8e59d23aa35cb9dafee0cf7d38e6a
ToppCellprimary_visual_cortex-Neuronal-glutamatergic_neuron-L5_PT|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

ZNF703 DEPDC7 BHLHE22

1.13e-041403037cc891d676555609add6fc7880735d948a2ad801
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_3|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ZNF703 IRX3 CCNP

1.25e-041453038da10bc6611976e1ec85e09f04a2dc5bf6555c9e
ToppCellCerebellum|World / BrainAtlas - Mouse McCarroll V32

ZIC5 ZIC2 ZIC3

1.30e-04147303dd730224e39571ca2c35042e242a908a02ee377d
ToppCellControl-Epithelial-PNEC|World / Disease state, Lineage and Cell class

SOX1 ZIC5 INSM1

1.35e-0414930302b47193621d23a50378d7905d7f85aaab686cfb
ToppCellE18.5-samps-Mesenchymal-Pericyte-pericyte_D|E18.5-samps / Age Group, Lineage, Cell class and subclass

HEY2 POU3F3 DEPDC7

1.35e-04149303dcf68eb25733b5db2893728fe4dca5c7267eb58c
ToppCellControl-Epithelial-PNEC|Control / Disease state, Lineage and Cell class

SOX1 ZIC5 INSM1

1.38e-04150303d6bbbe9d06a84c3de2a2e200ed512c8e8745f987
ToppCellTCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Mucinous_Colon_Adenocarcinoma-2|TCGA-Colorectal / Sample_Type by Project: Shred V9

TNFSF9 ZIC5 CCNP

1.58e-0415730367641089eeb1a502e01fb6ea35c3d19e21a5789e
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Degenerative_Cortical_Thick_Ascending_Limb_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

IRX3 ATP6AP1 SKIDA1

1.70e-041613036582dc295b6f66de95a00b70fa55a8e69a3e4c8f
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-3.5_mon-Neuronal-Cajal-Retzius|3.5_mon / Sample Type, Dataset, Time_group, and Cell type.

DMRTA1 ZIC2 ZIC3

1.76e-04163303c1484e4de8b10e2f5fb14a7c02b2a015ffe0305e
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Radial_glial-RGCs_early_2|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

HEY2 DMRTA1 ZIC2

1.83e-04165303e460e03992781073cd836a655f15dda3157cea55
ToppCellPND07-Epithelial-Epithelial_Airway-Basal-Basal-Basal_prolif|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SOX21 DEPDC7 TNFSF9

1.89e-0416730329d271643f3a1718b53db77b7d093ec94225a824
ToppCellnucseq-Epithelial-Epithelial_Neuro-Secretory-PNEC|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

SOX1 ZIC5 INSM1

2.03e-04171303f4321133190a3df9d31f5d4021a464d3840145f1
ToppCellnucseq-Epithelial-Epithelial_Neuro-Secretory-PNEC-PNEC|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

SOX1 ZIC5 INSM1

2.03e-04171303ed4fb6c84579d99df33de5f8f928c3cd2f3d3d72
ToppCellnucseq-Epithelial-Epithelial_Neuro-Secretory|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

SOX1 ZIC5 INSM1

2.07e-04172303d0cdedd734406988a9a93d7300c7b1a8b4b45c38
ToppCell367C-Epithelial_cells-Epithelial-G_(Club-Clara_cells)|367C / Donor, Lineage, Cell class and subclass (all cells)

DMRTA1 IRX3 SOX21

2.10e-04173303d8e965ff7e9b758876ec1521c1ccedd739e8d673
ToppCell367C-Epithelial_cells-Epithelial-G_(Club-Clara_cells)-|367C / Donor, Lineage, Cell class and subclass (all cells)

DMRTA1 IRX3 SOX21

2.10e-04173303c2d973356c40e0284fd3bd7733a164b141c66008
ToppCellTCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Colon_Adenocarcinoma-2|TCGA-Colorectal / Sample_Type by Project: Shred V9

TNFSF9 ZIC5 ZIC2

2.21e-041763031870860a9ebe7a655c4ea8898427e1097ee23113
ToppCellE12.5-Mesenchymal-myocytic_cell-vascular_associated_smooth_muscle_cell|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

HEY2 HES5 WNT1

2.25e-041773035cdf413f82376a95467322b16d10b0d1e7557e2d
ToppCell10x5'v1-week_12-13-Mesenchymal_osteo-stroma-osteochondral_precursor|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

HEY2 IRX3 WNT1

2.32e-0417930398c0c5c8034ae8a4b3ceea7fd1d0386ee5f89d09
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Neuronal-ventral_progenitors_and_neurons_2|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

POU3F3 HES5 INSM1

2.32e-04179303d95367d689732ab2653e8d70d8d8e5eb15ae6eef
ToppCellfacs-Heart-RA-3m-Mesenchymal-smooth_muscle_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ANKRD34A HEY2 BHLHE22

2.40e-04181303429df38438d5a7ff490c9ede34b69e2970c7ded2
ToppCellfacs-Heart-RA-3m-Mesenchymal-smooth_muscle_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ANKRD34A HEY2 BHLHE22

2.40e-04181303395cf5aa2d89b05328ab516b8c89401020b6d830
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-cycling_ENCC/glia|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX1 POU3F3 INSM1

2.40e-04181303f2ebeb4941510c4b6e50f2379c574d1778d6ced1
ToppCellAnterior_Cingulate_gyrus_(CgG)-Non-neuronal-Mesenchymal-Mes-Pericyte-Peri_L1-6_MUSTN1|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF703 ZIC5 ZIC2

2.44e-04182303406abe0e2958c73ff0f8bfbf7e6183dd6a53db0f
ToppCellPCW_05-06-Epithelial-Epithelial_neuroendo-epi_neuroendocrine2[NE2]_(12)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

SOX1 SOX21 INSM1

2.44e-04182303dc29e8735c3562ce32322351d28f7d9709208ebf
ToppCellAnterior_Cingulate_gyrus_(CgG)-Non-neuronal-Mesenchymal-Mes-Pericyte|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF703 ZIC5 ZIC2

2.44e-04182303a71054800e7696ae39b03b11aac2991fb5d54fad
ToppCellCerebellum-Macroglia|Cerebellum / BrainAtlas - Mouse McCarroll V32

SOX1 SOX21 DEPDC7

2.52e-0418430391b047a01d2cad231308279ca37fa699630f7864
ToppCellwk_15-18-Epithelial-Proximal_epithelial-intermediate_neuroendocrine|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

SOX1 INSM1 ZIC2

2.52e-041843039e5f98f9113e5e38bdadba6d9d2c346177fb35fe
ToppCellP03-Epithelial-epithelial_progenitor_cell-epithelial_unknown_3|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

SOX21 TMEM200C INSM1

2.52e-041843038880ff36c243cc60a524d74934d000aef26a70ac
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

POU3F3 IRX3 CCNP

2.56e-041853036da9a06e1514d5d5f47359a14637f02539846096
ToppCell5'-GW_trimst-2-SmallIntestine-Endothelial-lymphatic_endothelial-LEC5_(CLDN11+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

IRX3 ZIC5 ZIC2

2.56e-04185303241ea1e178fffef9e7df971de739e794332d5173
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell-Ascending_Thin_Limb_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

POU3F3 IRX3 CCNP

2.56e-041853034a188e2566a75d1b4f3c879a8c241c277c4b451c
ToppCellPrimary_Visual_cortex_(V1C)-Non-neuronal-Macroglial-Astro-Astrocyte-Astro_L1-6_FGFR3_ETNPPL|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX21 HES5 ZIC2

2.60e-0418630373cf266aeecd3cc15e8cb6094588a393bca8fbe6
ToppCellMid-temporal_gyrus_(MTG)-Non-neuronal-Macroglial-Astro-Astrocyte-Astro_L1_FGFR3_MT1G|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

DMRTA1 IRX3 ZIC5

2.60e-0418630341e03be964044dae690d566bd078dab3d8045eba
ToppCellfacs-Mammary_Gland-Mammary_Gland-21m|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF703 KLF16 IRX3

2.60e-04186303bd1185592aedebccd1007dbf2dd2f549fcdf9f42
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-ENCC/glia_Progenitor|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

POU3F3 HES5 INSM1

2.60e-0418630376535681667c8afb884fa72b6edfee9e1e46335b
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-neuron_precursor-cycling_neuroblast|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX1 POU3F3 INSM1

2.68e-0418830333afe31b1093d317dc38c324197c6e91bf6c39d3
ToppCell10x3'2.3-week_12-13-Mesenchymal_osteo-stroma-osteochondral_precursor|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

HEY2 POU3F3 IRX3

2.68e-04188303ed92cddf47defea2f904d36c7ae05ffa323349a9
ToppCellfacs-Mammary_Gland-Mammary_Gland-21m-Epithelial|Mammary_Gland / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ZNF703 KLF16 IRX3

2.72e-04189303965e0e388251e7318f8b463816dc96ccb4658677
ToppCell21-Trachea-Epithelial-Epithelial|Trachea / Age, Tissue, Lineage and Cell class

SOX1 POU3F3 ZIC2

2.90e-041933039a8bb44a37f3202e3123a6680bd5545dc91a6d40
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ZNF703 IRX3 CCNP

2.90e-041933030f2167eef8203a5659c8c72e4e77646003d64797
ToppCell5'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX1 POU3F3 INSM1

2.90e-04193303cdc44bf6f5436eb8a2d4720fe011dcb85ccecf87
ToppCell10x_3'_v2v3-Neoplastic-Differentiated-like-AC-like-AC-like-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

SOX1 POU3F3 SOX21

2.94e-0419430368d15917ae222cba0ad9e716d29eebb6c5f00f69
ToppCellBrain_organoid-organoid_Velasco_nature-3_mon-IPC_like-IPCs/Immature_PNs|3_mon / Sample Type, Dataset, Time_group, and Cell type.

DMRTA1 HES5 INSM1

2.99e-041953035e36a881fe2646f5a95d07d7b9265e6ada38730c
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-PFC|World / Primary Cells by Cluster

ZNF703 POU3F3 BHLHE22

3.08e-041973032c3b0072f8e1e09c77a85c6fc3133d1796932fb2
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell-Degenerative_Ascending_Thin_Limb_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

POU3F3 IRX3 CCNP

3.08e-041973035a71e859ebe734fc70a056807b07d99fa867c687
ToppCellNeuron-Postmitotic-Excitatory_Neuron_-PFC-29|World / Primary Cells by Cluster

ZNF703 POU3F3 BHLHE22

3.08e-04197303c5bc0e7eb85642b270efc2ba92b13a736af22052
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Degenerative_Cortical_Thick_Ascending_Limb_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

POU3F3 IRX3 ATP6AP1

3.08e-0419730338ddbfb6f6146fb9c27b2dade843a9a103e7991e
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-Glial_immature|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

POU3F3 HES5 INSM1

3.12e-04198303c8272ac4d90f2367f538f66db40de911ad73ea7f
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-1_mon-IPC_like-IPCs|1_mon / Sample Type, Dataset, Time_group, and Cell type.

DMRTA1 HES5 INSM1

3.12e-04198303b3488e916fff9a4ff62eb897d3783c93296dbd65
ToppCellBrain_organoid-organoid_Velasco_nature-3_mon-Neuronal-Immature_CPNs|3_mon / Sample Type, Dataset, Time_group, and Cell type.

POU3F3 BHLHE22 INSM1

3.12e-0419830332d58379a89be19b6b1a494bf033416546771c19
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-1_mon-IPC_like|1_mon / Sample Type, Dataset, Time_group, and Cell type.

DMRTA1 HES5 INSM1

3.12e-041983036d99901d4df24eb3c5cca80afd9a81eb7ee8fcf1
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-4M-Radial_glial-RGCs_3|Organoid-4M / Sample Type, Dataset, Time_group, and Cell type.

SOX21 HES5 ZIC2

3.17e-0419930379d87e2b0adeff2d33c3b699afe7211fddc4f285
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

POU3F3 IRX3 CCNP

3.17e-041993032e7f517c0444b4f29ff11c26ab32e9cc0f7e99ef
ToppCell3'-GW_trimst-1-LargeIntestine-Neuronal-Glial_immature-ENCC/glia_Progenitor|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

POU3F3 HES5 INSM1

3.17e-041993038d13a9ea87f685b5a34b84c4571db6be753cf2d9
ToppCellKidney-Keratinocytes|Kidney / Skin and Kidney Cells in Lupus Nephritis Patients.

IRX3 SOX21 ASPG

3.22e-0420030341d83faa9f45ee7ea2ab19be8ecc6d2c5ac7fe5d
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW23-Neuronal-Cortical_neuron|GW23 / Sample Type, Dataset, Time_group, and Cell type.

ZNF703 POU3F3 BHLHE22

3.22e-042003037bba2ff09349c8db3d1ccf53520b12cbf7b0abac
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-Neuronal-Neuron|3m / Sample Type, Dataset, Time_group, and Cell type.

POU3F3 DMRTA1 INSM1

3.22e-042003033d134ae3c48ff4d1849db4fbe44ff73fb6c8c779
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW16|fetalBrain_Zhong_nature / Sample Type, Dataset, Time_group, and Cell type.

ZNF703 POU3F3 INSM1

3.22e-04200303fd6b4ff4330db11c03f1eb4e06b43a162326f744
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-OPC_related-Oligodendrocyte/OPC|3m / Sample Type, Dataset, Time_group, and Cell type.

DMRTA1 HES5 INSM1

3.22e-042003037557ea33c3d080d0fa4ca0c2703279932d01e6d0
ToppCellLPS_anti-TNF-Hematopoietic_Myeloid-Dendritic_cells-pDC|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

DEPDC7 TTC39C INSM1

3.22e-042003036a34e07e6d77fe3fdd9ff44c4b1e46a023f6d6a2
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW16|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.

ZNF703 POU3F3 INSM1

3.22e-042003038795920911ee75c09a97cc948c14ad7301b27796
ToppCellBrain_organoid-organoid_Tanaka_cellReport-3m-OPC_related|3m / Sample Type, Dataset, Time_group, and Cell type.

DMRTA1 HES5 INSM1

3.22e-042003033dcaeb9f1e387784c299bfe0da1516598f82edf5
ToppCellBrain_organoid-organoid_Tanaka_cellReport-1m-OPC_related-Oligodendrocyte/OPC|1m / Sample Type, Dataset, Time_group, and Cell type.

BHLHE22 INSM1 ZIC3

3.22e-0420030380cec67b7557465320a847ba959a8a13f7c51566
ToppCellBrain_organoid-organoid_Tanaka_cellReport-1m-OPC_related|1m / Sample Type, Dataset, Time_group, and Cell type.

BHLHE22 INSM1 ZIC3

3.22e-042003038dafb90b418f91a0fb56c97db06233d3eca358dc
DiseaseAcrania

ZIC5 ZIC2

3.72e-0428302C0702169
DiseaseExencephaly

ZIC5 ZIC2

3.72e-0428302C0266453
DiseaseNeurenteric Cyst

ZIC5 ZIC2

3.72e-0428302C0027806
DiseaseTethered Cord Syndrome

ZIC5 ZIC2

3.72e-0428302C0080218
DiseaseDiastematomyelia

ZIC5 ZIC2

3.72e-0428302C0011999
DiseaseSpinal Cord Myelodysplasia

ZIC5 ZIC2

3.72e-0428302C0344479
DiseaseIniencephaly

ZIC5 ZIC2

3.72e-0428302C0152234
DiseaseCraniorachischisis

ZIC5 ZIC2

3.99e-0429302C0152426
DiseaseNeural Tube Defects

ZIC5 ZIC2

4.27e-0430302C0027794
Diseasecataract

DMRTA1 PROSER3

9.04e-03141302MONDO_0005129
DiseaseCraniofacial Abnormalities

ZIC5 ZIC3

1.10e-02156302C0376634

Protein segments in the cluster

PeptideGeneStartEntry
LPSSAAAAAAAAALH

BHLHE22

321

Q8NFJ8
AAAAAAAALHPALGA

BHLHE22

326

Q8NFJ8
EKAAALNLSALHSPA

DEPDC7

6

Q96QD5
AAAALSLAHRLLDGA

CCNP

251

Q9H8S5
AAVASLLLAHGADPS

ANKRD34A

91

Q69YU3
AAAAAATAAAHSFPL

HEY2

266

Q9UBP5
DAAKSLGPLHAAAAA

NKX2-4

171

Q9H2Z4
GAAAAPHLLAASILA

KLF16

71

Q9BXK1
LRNALVPSLACAAAH

ASPG

396

Q86U10
HAHAPALAAAAAAAA

PRDM12

341

Q9H4Q4
PSLFLRAAAAAAAAA

DMRTA1

51

Q5VZB9
LPHAAAAAAAAAAAA

POU3F3

101

P20264
PAALGSAANHSAALL

GLUD2

16

P49448
RAHAALAAALACAPG

INSM1

61

Q01101
SALQLSPAAAAAAAH

IRX3

381

P78415
SPAAAAAAAHRLVSA

IRX3

386

P78415
HLLLPAAAAAASANA

RSBN1L

141

Q6PCB5
SAALLNSHHAAAPAV

TAF4

201

O00268
LANPEKAAAAAAAAA

SOX21

131

Q9Y651
HSLRAKDLAAAAAAA

TMEM200C

211

A6NKL6
SLLCSKHPAAAAAAA

SKIDA1

216

Q1XH10
KHPAAAAAAAAAAAA

SKIDA1

221

Q1XH10
ADHAPSEALLAQAAL

PROSER3

386

Q2NL68
PAAAAAAAAQSRLHS

SOX1

356

O00570
AKATAAAAAAHQPAC

HES5

146

Q5TA89
AAAAAAAAAAFKLSP

ZIC3

46

O60481
AAAAAFKLSPAAAHD

ZIC3

51

O60481
AAAAAAAAASCHLHL

ZNF703

506

Q9H7S9
LPVFLSLAAAAAAAA

ATP6AP1

26

Q15904
SLLAALHAAQHFPNL

UNQ9370/PRO34162

66

Q6UXP9
HLQPLRSAAGAAALA

TNFSF9

166

P41273
LLALAALPAALAANS

WNT1

16

P04628
AAAAAPLQDAELALA

TTC39C

21

Q8N584
AAAAAAALGPHAAHV

ZIC2

91

O95409
EAPAAAARAAALVAH

ZIC5

116

Q96T25