Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyCellularComponent	growth cone	AMFR ZFYVE27 COPA COPG2 GRIN1 ZNF804A IQGAP1 TAOK2 PPP1R2B PPP1R2P1 HNRNPR NIN	1.50e-06	245	180	12	GO:0030426
GeneOntologyCellularComponent	site of polarized growth	AMFR ZFYVE27 COPA COPG2 GRIN1 ZNF804A IQGAP1 TAOK2 PPP1R2B PPP1R2P1 HNRNPR NIN	2.10e-06	253	180	12	GO:0030427
GeneOntologyCellularComponent	type III intermediate filament	VIM DES PRPH	1.23e-05	6	180	3	GO:0045098
GeneOntologyCellularComponent	nuclear pore nuclear basket	RGPD1 NUP35 RGPD3 PCID2	1.48e-05	18	180	4	GO:0044615
GeneOntologyCellularComponent	supramolecular fiber	KIF13B VIM EPPK1 TTLL3 CCT3 DNAH10 IQGAP2 DNAH2 JPH2 TUBGCP2 ZNF804A RYR1 IQGAP1 DES INA KIF15 MYOZ1 ANKRD1 SYNE2 CST3 ASPM SPAG17 CSPP1 PRPH NIN	2.82e-05	1179	180	25	GO:0099512
GeneOntologyCellularComponent	SUMO ligase complex	SLF1 SMC6 RGPD1 RGPD3	2.84e-05	21	180	4	GO:0106068
GeneOntologyCellularComponent	supramolecular polymer	KIF13B VIM EPPK1 TTLL3 CCT3 DNAH10 IQGAP2 DNAH2 JPH2 TUBGCP2 ZNF804A RYR1 IQGAP1 DES INA KIF15 MYOZ1 ANKRD1 SYNE2 CST3 ASPM SPAG17 CSPP1 PRPH NIN	3.15e-05	1187	180	25	GO:0099081
GeneOntologyCellularComponent	distal axon	AMFR ZFYVE27 COPA COPG2 GRIN1 ZNF804A IQGAP1 TAOK2 PPP1R2B PPP1R2P1 HNRNPR PRPH NIN	1.06e-04	435	180	13	GO:0150034
GeneOntologyCellularComponent	microtubule organizing center	BICD2 VIM DCAF13 SLF1 LEO1 CCDC18 TRIM43 CC2D1A SFI1 TUBGCP2 UNC119 PPP4R3B TM9SF2 KIF15 ASPM CCDC15 ROCK1 CEP126 CSPP1 NIN	1.34e-04	919	180	20	GO:0005815
GeneOntologyCellularComponent	COPI vesicle coat	COPA COPG1 COPG2	1.69e-04	13	180	3	GO:0030126
GeneOntologyCellularComponent	annulate lamellae	BICD2 RGPD1 RGPD3	2.13e-04	14	180	3	GO:0005642
GeneOntologyCellularComponent	microtubule	KIF13B TTLL3 CCT3 DNAH10 IQGAP2 DNAH2 TUBGCP2 ZNF804A IQGAP1 KIF15 ASPM SPAG17 CSPP1 NIN	2.22e-04	533	180	14	GO:0005874
GeneOntologyCellularComponent	axon	KIF13B VIM DHX36 AMFR ZFYVE27 COPA COPG2 GRIN1 ZNF804A IQGAP1 TAOK2 PPP1R2B IGF1R SCN4A CST3 PPP1R2P1 HNRNPR PRPH NIN	2.57e-04	891	180	19	GO:0030424
GeneOntologyCellularComponent	polymeric cytoskeletal fiber	KIF13B VIM EPPK1 TTLL3 CCT3 DNAH10 IQGAP2 DNAH2 TUBGCP2 ZNF804A IQGAP1 DES INA KIF15 ASPM SPAG17 CSPP1 PRPH NIN	2.87e-04	899	180	19	GO:0099513
GeneOntologyCellularComponent	COPI-coated vesicle membrane	COPA COPG1 COPG2	5.50e-04	19	180	3	GO:0030663
GeneOntologyCellularComponent	sex chromosome	SMC6 PCGF3 USP7 SMARCC1	5.52e-04	44	180	4	GO:0000803
GeneOntologyCellularComponent	nuclear inclusion body	SLF1 RGPD1 RGPD3	6.43e-04	20	180	3	GO:0042405
GeneOntologyCellularComponent	transferase complex	AMFR DCAF13 SLF1 LEO1 POLE2 UBXN8 MED31 SMC6 RGPD1 PCGF3 PAPSS1 GTF2E1 TRMT10C IGF1R PIK3R1 CSNK2A2 RGPD3 BRD1 DNA2	6.66e-04	963	180	19	GO:1990234
GeneOntologyCellularComponent	intracellular protein-containing complex	AMFR DCAF13 LEO1 CCT3 POLE2 UBXN8 MED31 LARS1 USP25 PCGF3 AXIN1 GTF2E1 TRMT10C DROSHA CSNK2A2 BRD1 DNA2 TRAPPC2L NIN	7.45e-04	972	180	19	GO:0140535
GeneOntologyCellularComponent	centrosome	BICD2 DCAF13 SLF1 LEO1 CCDC18 TRIM43 CC2D1A TUBGCP2 UNC119 PPP4R3B KIF15 ASPM CCDC15 CEP126 CSPP1 NIN	1.05e-03	770	180	16	GO:0005813
GeneOntologyCellularComponent	postsynapse	SEMA4B MYO5B SPTB GRIN1 ZNF804A CHRNA5 TAOK2 LIN7B USP6 PPP1R2B IGF1R INA SRGAP3 DROSHA PPP1R2P1 PRKCD MAPK10 EPN1 USP48	1.28e-03	1018	180	19	GO:0098794
GeneOntologyCellularComponent	nuclear protein-containing complex	BICD2 LEO1 POLE2 MED31 RGPD1 PCGF3 HNRNPF NUP35 GTF2E1 LIN37 SSU72 DROSHA CSNK2A2 RGPD3 SYNE2 SNRNP40 SMU1 RBM5 SMARCC1 BRD1 PCID2 HYAL2 HNRNPR	1.74e-03	1377	180	23	GO:0140513
GeneOntologyCellularComponent	nuclear pore	BICD2 RGPD1 NUP35 RGPD3 PCID2	1.82e-03	101	180	5	GO:0005643
GeneOntologyCellularComponent	cytoplasmic periphery of the nuclear pore complex	RGPD1 RGPD3	2.00e-03	8	180	2	GO:1990723
GeneOntologyCellularComponent	spindle pole	SMC6 TUBGCP2 UNC119 KIF15 ASPM CSPP1 NIN	2.04e-03	205	180	7	GO:0000922
GeneOntologyCellularComponent	somatodendritic compartment	CYBB DHX36 AMFR ZFYVE27 COPA MYO5B GRIN1 KCNB2 ZNF804A CHRNA5 TAOK2 PPP1R2B IGF1R CST3 PPP1R2P1 BRD1 MAPK10 HNRNPR PDE11A PRPH NIN	2.10e-03	1228	180	21	GO:0036477
GeneOntologyCellularComponent	Smc5-Smc6 complex	SLF1 SMC6	2.55e-03	9	180	2	GO:0030915
GeneOntologyCellularComponent	junctional membrane complex	JPH2 RYR1	2.55e-03	9	180	2	GO:0030314
GeneOntologyCellularComponent	vesicle coat	COPA COPG1 COPG2 EPN1	2.67e-03	67	180	4	GO:0030120
GeneOntologyCellularComponent	cell body	CYBB VIM DHX36 AMFR COPA CCT3 MYO5B GRIN1 KCNB2 ZNF804A CHRNA5 IGF1R CST3 BRD1 MAPK10 PDE11A PRPH	2.83e-03	929	180	17	GO:0044297
GeneOntologyCellularComponent	COPI-coated vesicle	COPA COPG1 COPG2	2.83e-03	33	180	3	GO:0030137
GeneOntologyCellularComponent	inner dynein arm	DNAH10 DNAH2	3.17e-03	10	180	2	GO:0036156
GeneOntologyCellularComponent	nuclear pore cytoplasmic filaments	RGPD1 RGPD3	3.17e-03	10	180	2	GO:0044614
GeneOntologyCellularComponent	junctional sarcoplasmic reticulum membrane	JPH2 RYR1	3.17e-03	10	180	2	GO:0014701
GeneOntologyCellularComponent	I band	JPH2 RYR1 DES MYOZ1 ANKRD1 SYNE2	3.20e-03	166	180	6	GO:0031674
Domain	Filament_head	VIM DES INA PRPH	2.32e-07	7	171	4	PF04732
Domain	Intermed_filament_DNA-bd	VIM DES INA PRPH	2.32e-07	7	171	4	IPR006821
Domain	Coatomer_g_Cpla	COPG1 COPG2	8.33e-05	2	171	2	IPR032154
Domain	-	COPG1 COPG2	8.33e-05	2	171	2	2.60.40.1480
Domain	COP-gamma_platf	COPG1 COPG2	8.33e-05	2	171	2	PF08752
Domain	Coatomer_g_Cpla	COPG1 COPG2	8.33e-05	2	171	2	PF16381
Domain	Coatomer_gsu_app_Ig-like-sub	COPG1 COPG2	8.33e-05	2	171	2	IPR013040
Domain	PKK	SLK STK10	8.33e-05	2	171	2	IPR022165
Domain	DM14	CC2D1B CC2D1A	8.33e-05	2	171	2	SM00685
Domain	Coatomer_gsu	COPG1 COPG2	8.33e-05	2	171	2	IPR017106
Domain	PKK	SLK STK10	8.33e-05	2	171	2	PF12474
Domain	DM14	CC2D1B CC2D1A	8.33e-05	2	171	2	IPR006608
Domain	RasGAP_C	IQGAP2 IQGAP1	2.49e-04	3	171	2	IPR000593
Domain	RasGAP_C	IQGAP2 IQGAP1	2.49e-04	3	171	2	PF03836
Domain	CH	IQGAP2 SPTB IQGAP1 SYNE2 ASPM	3.22e-04	65	171	5	SM00033
Domain	CH	IQGAP2 SPTB IQGAP1 SYNE2 ASPM	4.54e-04	70	171	5	PF00307
Domain	IQ	IQGAP2 MYO5B IQGAP1 SCN4A ASPM	4.85e-04	71	171	5	PF00612
Domain	-	IQGAP2 SPTB IQGAP1 SYNE2 ASPM	4.85e-04	71	171	5	1.10.418.10
Domain	-	GTF2IRD2B GTF2IRD2	4.94e-04	4	171	2	3.90.1460.10
Domain	Clathrin_a/coatomer_app_sub_C	COPG1 COPG2	4.94e-04	4	171	2	IPR015873
Domain	GTF2I	GTF2IRD2B GTF2IRD2	4.94e-04	4	171	2	PS51139
Domain	GTF2I	GTF2IRD2B GTF2IRD2	4.94e-04	4	171	2	PF02946
Domain	GTF2I	GTF2IRD2B GTF2IRD2	4.94e-04	4	171	2	IPR004212
Domain	-	COPG1 COPG2	4.94e-04	4	171	2	3.30.310.30
Domain	CH	IQGAP2 SPTB IQGAP1 SYNE2 ASPM	5.51e-04	73	171	5	PS50021
Domain	CH-domain	IQGAP2 SPTB IQGAP1 SYNE2 ASPM	6.24e-04	75	171	5	IPR001715
Domain	Ion_trans_dom	TRPC4 KCNB2 RYR1 SCN4A CNGB3 CACNA1I	6.36e-04	114	171	6	IPR005821
Domain	Ion_trans	TRPC4 KCNB2 RYR1 SCN4A CNGB3 CACNA1I	6.36e-04	114	171	6	PF00520
Domain	IQ	IQGAP2 MYO5B IQGAP1 SCN4A ASPM	8.87e-04	81	171	5	SM00015
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	KIF13B VIM CUX2 DCAF13 LEO1 COPA CCT3 VEZF1 IQGAP2 MYO5B MATR3 UBXN8 PABPC4 DNAH2 RGPD1 CC2D1B TRIM43 HNRNPF NUP35 IQGAP1 DES GTF2IRD2B INA FAM186A SNX25 RGPD3 SYNE2 SCN4A ASPM GTF2IRD2 RBM5 SMARCC1 SPAG17 PCID2 HNRNPR PRPH	4.05e-15	1442	181	36	35575683
Pubmed	Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.	VIM LEO1 COPA CCT3 MYO5B ATAD5 MAZ NAGLU CCDC18 KIAA1549 COPG2 NIBAN2 PPP4R3B GTF2E1 TRMT10C KIF15 SSU72 PIK3R1 SYNE2 USP7 ROCK1 CSPP1 FKBP5 NIN	1.38e-09	1049	181	24	27880917
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	VIM DHX36 COPA CCT3 MYO5B PPFIBP2 MATR3 PABPC4 LARS1 COPG2 PAPSS1 HNRNPF AXIN1 IQGAP1 GSTM3 IGF1R PIK3R1 SNRNP40 USP7 SMU1 SMARCC1 FKBP5 PCID2 HNRNPR	3.79e-08	1247	181	24	27684187
Pubmed	Systematic analysis of human protein complexes identifies chromosome segregation proteins.	BICD2 COPA CCT3 COPG1 MATR3 PABPC4 SMC6 RGPD1 NIBAN2 TUBGCP2 PAPSS1 HNRNPF STRIP1 IQGAP1 LIN37 RGPD3 RECQL4 ASPM SNRNP40 CCDC15 SMARCC1 NKAP HNRNPR	4.05e-08	1155	181	23	20360068
Pubmed	Large-scale mapping of human protein-protein interactions by mass spectrometry.	DHX36 AMFR EPPK1 IQGAP2 COPG1 MATR3 PABPC4 LARS1 COPG2 STRIP1 AXIN1 IQGAP1 GSTM3 PPP4R3B IGF1R PIK3R1 CSNK2A2 ASPM SNRNP40 USP7 SMARCC1 SH3BP5L PCID2 HNRNPR	6.52e-08	1284	181	24	17353931
Pubmed	Defining the human deubiquitinating enzyme interaction landscape.	BICD2 KIF13B SLK COPA COPG1 MAZ USP25 NIBAN2 TUBGCP2 STRIP1 IQGAP1 USP6 TRMT10C SSU72 CSNK2A2 SNRNP40 USP7 SMU1 USP48 FKBP5 NIN	7.42e-08	1005	181	21	19615732
Pubmed	Nestin mRNA expression correlates with the central nervous system progenitor cell state in many, but not all, regions of developing central nervous system.	VIM DES INA PRPH	8.76e-08	9	181	4	7720210
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	VIM DHX36 SLK DCAF13 COPA CCT3 DNAH10 COPG1 MATR3 PABPC4 SMC6 LARS1 HNRNPF NUP35 IQGAP1 TRMT10C TM9SF2 CSNK2A2 SNRNP40 USP7 SMU1 RBM5 SMARCC1 PRKCD HNRNPR	1.13e-07	1425	181	25	30948266
Pubmed	The protein interaction landscape of the human CMGC kinase group.	MAZ PABPC4 MED31 NSRP1 HNRNPF AXIN1 IQGAP1 GTF2E1 DROSHA CSNK2A2 SNRNP40 USP7 ROCK1 NKAP MAPK10 FKBP5 HNRNPR	1.58e-07	695	181	17	23602568
Pubmed	Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.	KIF13B VIM SLK CCT3 IQGAP2 MATR3 TRPC4 RGPD1 GRIN1 STRIP1 IQGAP1 TAOK2 INA KIF15 SRGAP3 CSNK2A2 RGPD3 SYNE2 SMARCC1 ROCK1	1.71e-07	963	181	20	28671696
Pubmed	KAP1 facilitates reinstatement of heterochromatin after DNA replication.	KIF13B DCAF13 EPPK1 COPA CCT3 IQGAP2 COPG1 LARS1 COPG2 HNRNPF NUP35 IQGAP1 SSU72 RGPD3 SMU1 SMARCC1 FKBP5	1.90e-07	704	181	17	29955894
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	DHX36 DCAF13 EPPK1 COPA CCT3 COPG1 PABPC4 COPG2 HNRNPF IQGAP1 INA CSNK2A2 SYNE2 USP7 SMU1 SMARCC1	3.65e-07	653	181	16	22586326
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	VIM DHX36 SLK EPPK1 LEO1 COPA CCT3 COPG1 MATR3 PABPC4 LARS1 CC2D1A HNRNPF IQGAP1 GSTM3 GTF2E1 TRMT10C CSNK2A2 SYNE2 SNRNP40 USP7 SMU1 SMARCC1 HNRNPR	3.82e-07	1415	181	24	28515276
Pubmed	Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms.	AMFR COPG1 MYO5B HS6ST2 PABPC4 NAGLU USP25 COPG2 HMOX1 TUBGCP2 COMMD3 TM9SF2 CSNK2A2 USP7 FASTKD3 DNA2 NIN	4.93e-07	754	181	17	33060197
Pubmed	Genome-wide CRISPR screens identify novel regulators of wild-type and mutant p53 stability.	BICD2 KIF13B LEO1 TUBGCP2 BLK PPP4R3B KIF15 DROSHA ASPM USP7 ROCK1 SH3BP5L FKBP5 HNRNPR NIN	5.19e-07	588	181	15	38580884
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	DHX36 DCAF13 COPA IQGAP2 ATAD5 MATR3 PABPC4 SMC6 LARS1 HNRNPF IQGAP1 DROSHA ASPM SNRNP40 NKAP PCID2 HNRNPR	5.40e-07	759	181	17	35915203
Pubmed	Cloning and characterization of human phosphatase inhibitor-2 (IPP-2) sequences.	PPP1R2B PPP1R2C PPP1R2P1	5.52e-07	4	181	3	7949733
Pubmed	Interactions between epiplakin and intermediate filaments.	VIM EPPK1 DES	5.52e-07	4	181	3	16923132
Pubmed	Type III Intermediate Filaments Desmin, Glial Fibrillary Acidic Protein (GFAP), Vimentin, and Peripherin.	VIM DES PRPH	5.52e-07	4	181	3	29196434
Pubmed	Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1.	VIM COPA MATR3 PABPC4 LARS1 COPG2 HNRNPF IQGAP1 INA HNRNPR	6.08e-07	241	181	10	23125841
Pubmed	Transcription factor Foxp3 and its protein partners form a complex regulatory network.	DHX36 ZNF148 VEZF1 ATAD5 RGPD1 COPG2 TUBGCP2 IQGAP1 GTF2E1 RGPD3 RBM5 SMARCC1	6.26e-07	370	181	12	22922362
Pubmed	A high-throughput approach for measuring temporal changes in the interactome.	VIM SLK LEO1 COPA CCT3 COPG1 PABPC4 LARS1 USP25 CC2D1B NIBAN2 PAPSS1 HNRNPF IQGAP1 PPP4R3B GTF2E1 KIF15 CSNK2A2 USP7 ROCK1 EPN1 USP48 FKBP5 HNRNPR	6.28e-07	1455	181	24	22863883
Pubmed	Kelch Domain of Gigaxonin Interacts with Intermediate Filament Proteins Affected in Giant Axonal Neuropathy.	VIM CCT3 DNAH10 SPTB PABPC4 HNRNPF INA SYNE2 PRPH	6.57e-07	187	181	9	26460568
Pubmed	Immunoaffinity profiling of tyrosine phosphorylation in cancer cells.	BICD2 VIM COPA PABPC4 CC2D1A TUBGCP2 CFAP298 HNRNPF IQGAP1 PIK3R1 PCID2	1.30e-06	327	181	11	15592455
Pubmed	Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.	VIM CCT3 MATR3 PABPC4 LARS1 TUSC1 HNRNPF INA CSNK2A2 SMU1 RBM5 ROCK1 HNRNPR PRPH	1.32e-06	551	181	14	34728620
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	VIM DHX36 DCAF13 ZNF148 COPA CCT3 COPG1 MATR3 PABPC4 LARS1 COPG2 HNRNPF GSTM3 PPP4R3B TRMT10C CSNK2A2 SNRNP40 SMARCC1 NKAP FKBP5 PCID2 HNRNPR	1.58e-06	1318	181	22	30463901
Pubmed	PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.	DHX36 COPA MATR3 PABPC4 HNRNPF IQGAP1 CSNK2A2 SNRNP40 USP7 DNA2 HNRNPR	1.90e-06	340	181	11	24332808
Pubmed	HSF1 phosphorylation establishes an active chromatin state via the TRRAP-TIP60 complex and promotes tumorigenesis.	PPP1R21 EPPK1 COPA COPG1 SMC6 LARS1 DNAH2 CASP10 CC2D1A INA SSU72 SYNE2 SNRNP40 USP7 SMARCC1 PCID2	2.37e-06	754	181	16	35906200
Pubmed	Fibril treatment changes protein interactions of tau and α-synuclein in human neurons.	VIM COPA IQGAP2 LARS1 HNRNPF STRIP1 GSTM3 INA SRGAP3 SYNE2 SNRNP40 HNRNPR PRPH	2.37e-06	498	181	13	36634849
Pubmed	Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.	VIM EPPK1 COPA CCT3 COPG1 COPG2 SFI1 NIBAN2 TUBGCP2 HNRNPF IQGAP1 SNRNP40 USP48 HNRNPR	2.49e-06	582	181	14	20467437
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	VIM SLK EPPK1 COPA CCT3 IQGAP2 COPG1 MATR3 PABPC4 LARS1 COPG2 HNRNPF COMMD3 IQGAP1 INA TPP1 CSNK2A2 USP7 FKBP5 HNRNPR	2.62e-06	1149	181	20	35446349
Pubmed	A probability-based approach for high-throughput protein phosphorylation analysis and site localization.	BICD2 VIM ZNF148 LEO1 COPA CC2D1A NIBAN2 NSRP1 STRIP1 NUP35 IQGAP1 PPP4R3B STK10	2.65e-06	503	181	13	16964243
Pubmed	The HIV-1 Tat protein recruits a ubiquitin ligase to reorganize the 7SK snRNP for transcriptional activation.	VIM DHX36 SLF1 LEO1 COPA CCT3 MATR3 PABPC4 LARS1 COPG2 HNRNPF BLK GTF2IRD2B TRMT10C CSNK2A2 GTF2IRD2 SMARCC1 FKBP5 HNRNPR PRPH	2.76e-06	1153	181	20	29845934
Pubmed	Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.	DCAF13 ZNF148 ATAD5 POLE2 UBXN8 CCDC18 KIAA1549 CC2D1A NIBAN2 NSRP1 GSTM3 TRMT10C PIK3R1 SYNE2 ASPM SNRNP40 SMU1 CDK5RAP1 DNA2 USP48 CSPP1 FKBP5 NIN	3.22e-06	1487	181	23	33957083
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	BICD2 ZNF148 LEO1 COPA MATR3 NIBAN2 HNRNPF STRIP1 IQGAP1 STK10 CSNK2A2 USP7 SMARCC1 PRKCD NKAP FKBP5	3.30e-06	774	181	16	15302935
Pubmed	Gene essentiality and synthetic lethality in haploid human cells.	COPA CCT3 COPG1 LARS1 CFAP298 IQGAP1 TM9SF2 SMARCC1 TRAPPC2L	3.50e-06	229	181	9	26472760
Pubmed	USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.	VIM SDK2 MATR3 FAM186A SNX25 ASPM USP7 SMARCC1 HNRNPR	4.17e-06	234	181	9	36243803
Pubmed	PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.	ZNF148 CCT3 VEZF1 PABPC4 LARS1 CC2D1A TUBGCP2 IQGAP1 PPP4R3B STK10 LIN37 CSNK2A2 SNRNP40 SMU1 RBM5 SMARCC1 BIN2 FKBP5 HNRNPR	5.48e-06	1103	181	19	34189442
Pubmed	Human transcription factor protein interaction networks.	DHX36 SLK SLF1 ZNF148 COPA CCT3 DNAH10 VEZF1 ATAD5 MATR3 MAZ PABPC4 LARS1 RGPD1 CC2D1A PCGF3 LIN37 CSNK2A2 SYNE2 USP7 SMARCC1 HNRNPR	5.78e-06	1429	181	22	35140242
Pubmed	KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.	VIM DHX36 SLK COPA CCT3 IQGAP2 MYO5B MATR3 SPTB PABPC4 LARS1 KIAA1549 GRIN1 HNRNPF STRIP1 IQGAP1 INA SRGAP3 CSNK2A2 USP7 SMU1 HNRNPR	5.91e-06	1431	181	22	37142655
Pubmed	SARS-CoV-2 nucleocapsid protein binds host mRNAs and attenuates stress granules to impair host stress response.	VIM EPPK1 COPA CCT3 MATR3 PABPC4 LARS1 HNRNPF COMMD3 TRMT10C SMU1 HNRNPR	6.30e-06	463	181	12	34901782
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	ZNF148 ATAD5 MAZ KIAA1549 TUBGCP2 NSRP1 DROSHA PIK3R1 CSNK2A2 ASPM USP7 SMARCC1 NKAP BRD1 DNA2 IQCM PCID2 SP140 NIN	6.47e-06	1116	181	19	31753913
Pubmed	A protein-interaction network of interferon-stimulated genes extends the innate immune system landscape.	AMFR COPA CCT3 IQGAP2 COPG1 MAZ PABPC4 LARS1 COPG2 TUBGCP2 COMMD3 IQGAP1 TRMT10C CSNK2A2 SYNE2 SNRNP40 USP7 SMU1 EPN1 TRAPPC2L FKBP5 HNRNPR	6.52e-06	1440	181	22	30833792
Pubmed	Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.	LEO1 COPA CCT3 ATAD5 MATR3 SMC6 PAPSS1 IQGAP1 PPP4R3B GTF2E1 SSU72 CSNK2A2 SNRNP40 USP7 SMU1 SMARCC1 USP48 FKBP5	6.53e-06	1014	181	18	32416067
Pubmed	The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.	VIM COPA CCT3 COPG1 LARS1 COPG2 TUBGCP2 HNRNPF IQGAP1 SNRNP40 USP7 SMU1 SMARCC1 HNRNPR	7.11e-06	638	181	14	33239621
Pubmed	Novel isotypic gamma/zeta subunits reveal three coatomer complexes in mammals.	COPA COPG1 COPG2	7.62e-06	8	181	3	14729954
Pubmed	In vivo assembly of coatomer, the COP-I coat precursor.	COPA COPG1 COPG2	7.62e-06	8	181	3	8940050
Pubmed	A multi-factor trafficking site on the spliceosome remodeling enzyme BRR2 recruits C9ORF78 to regulate alternative splicing.	AMFR LEO1 COPA IQGAP2 COPG1 MATR3 COPG2 TUBGCP2 IQGAP1 TRMT10C SNRNP40 SMARCC1 PCID2	8.41e-06	560	181	13	35241646
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	VIM DHX36 DCAF13 COPA CCT3 COPG1 MATR3 LARS1 HNRNPF COMMD3 IQGAP1 TPP1 RECQL4 ASPM SNRNP40 USP7 SMU1 SMARCC1 PRKCD PCID2 HNRNPR	8.47e-06	1353	181	21	29467282
Pubmed	Proteomic analysis and identification of cellular interactors of the giant ubiquitin ligase HERC2.	BICD2 COPA COPG1 COPG2 SELENOO ASPM NIN	8.81e-06	139	181	7	25476789
Pubmed	Comparative proximity biotinylation implicates the small GTPase RAB18 in sterol mobilization and biosynthesis.	BICD2 VIM SLK COPG1 COPG2 CC2D1A NIBAN2 NUP35 PPP1R2B BCAP29 RGPD3 SYNE2 PCID2	9.77e-06	568	181	13	37774976
Pubmed	C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.	VIM DHX36 COPA CCT3 IQGAP2 COPG1 MATR3 PABPC4 LARS1 RGPD1 HNRNPF TPP1 RGPD3 SNRNP40 USP7 NKAP DNA2 FKBP5 PCID2 HNRNPR	9.85e-06	1257	181	20	37317656
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	SLK LEO1 COPA CCT3 MATR3 PABPC4 LARS1 DNAH2 ZNF804A AXIN1 PPP4R3B TRMT10C BCAP29 SNRNP40 SMARCC1 ROCK1	1.02e-05	847	181	16	35235311
Pubmed	Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.	VIM DHX36 MATR3 HNRNPF IQGAP1 PIK3R1 RECQL4 USP7 SMARCC1 DNA2 HNRNPR PRPH	1.02e-05	486	181	12	30940648
Pubmed	Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.	EPPK1 COPA CCT3 COPG1 LARS1 NIBAN2 IQGAP1 USP7 USP48 HNRNPR	1.05e-05	332	181	10	32786267
Pubmed	Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.	VIM LEO1 COPA CCT3 IQGAP2 COPG1 MATR3 LARS1 RGPD1 COPG2 IQGAP1 CSNK2A2 RGPD3 NKAP	1.13e-05	665	181	14	30457570
Pubmed	FKBP5 regulates trophoblast-macrophage crosstalk in recurrent spontaneous abortion through PI3K/AKT and NF-κB signaling pathways.	VIM PIK3R1 FKBP5	1.14e-05	9	181	3	37827456
Pubmed	A single binding site for dilysine retrieval motifs and p23 within the gamma subunit of coatomer.	COPA COPG1 COPG2	1.14e-05	9	181	3	9751720
Pubmed	COP I domains required for coatomer integrity, and novel interactions with ARF and ARF-GAP.	COPA COPG1 COPG2	1.14e-05	9	181	3	10921873
Pubmed	The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.	PCNX3 VEZF1 ATAD5 MAZ PABPC4 COPG2 STRIP1 NUP35 IQGAP1 TAOK2 GSTM3 TRMT10C DROSHA TPP1 CSNK2A2 RGPD3 USP7 SMU1 RBM5 NKAP EPN1 PCID2	1.19e-05	1497	181	22	31527615
Pubmed	Homologous Transcription Factors DUX4 and DUX4c Associate with Cytoplasmic Proteins during Muscle Differentiation.	VIM DHX36 COPA CCT3 PABPC4 LARS1 HNRNPF IQGAP1 DES	1.36e-05	271	181	9	26816005
Pubmed	In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.	VIM COPA CCT3 MATR3 MAZ PABPC4 COPG2 HMOX1 HNRNPF TRMT10C ASPM SNRNP40 USP7 SMU1 SMARCC1 FKBP5 HNRNPR	1.43e-05	971	181	17	33306668
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	VIM DHX36 COPA VEZF1 MATR3 MAZ NSRP1 HNRNPF TRMT10C INA DROSHA SNRNP40 USP7 SMU1 RBM5 SMARCC1 HNRNPR PRPH	1.56e-05	1082	181	18	38697112
Pubmed	TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.	VIM DCAF13 CCT3 MATR3 PABPC4 HNRNPF IQGAP1 SNRNP40 SMU1 SMARCC1 HNRNPR	1.74e-05	430	181	11	38172120
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	VIM DHX36 DCAF13 COPA CCT3 MATR3 MAZ NSRP1 HNRNPF IQGAP1 TRMT10C CSNK2A2 ANKRD1 USP7 RBM5 SMARCC1 HNRNPR	1.80e-05	989	181	17	36424410
Pubmed	Histone-binding of DPF2 mediates its repressive role in myeloid differentiation.	DHX36 DCAF13 MAZ PABPC4 NSRP1 INA SMARCC1 HNRNPR PRPH	1.91e-05	283	181	9	28533407
Pubmed	Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.	DHX36 MATR3 PABPC4 HNRNPF DROSHA CSNK2A2 SMARCC1 HNRNPR	2.16e-05	220	181	8	24550385
Pubmed	TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.	MATR3 HNRNPF USP7 SMU1 SMARCC1 USP48 FKBP5 HNRNPR	2.16e-05	220	181	8	35785414
Pubmed	Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.	VIM EPPK1 COPA CCT3 COPG1 MATR3 LARS1 COPG2 NIBAN2 HNRNPF RYR1 IQGAP1 GSTM3 USP7 SPAG17	2.35e-05	807	181	15	30575818
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	DHX36 SDK2 MATR3 LARS1 KIAA1549 SFI1 IQGAP1 TAOK2 PPP4R3B CEP126 DNA2 NIN	2.36e-05	529	181	12	14621295
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	DHX36 COPA MATR3 MAZ PABPC4 HNRNPF IQGAP1 TRMT10C CSNK2A2 SNRNP40 SMU1 CDK5RAP1 NKAP HNRNPR	2.44e-05	713	181	14	29802200
Pubmed	Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.	VIM DHX36 CCT3 MATR3 PABPC4 NSRP1 HNRNPF DES INA DROSHA SNRNP40 SMU1 HNRNPR PRPH	2.48e-05	714	181	14	28302793
Pubmed	Male-Specific cAMP Signaling in the Hippocampus Controls Spatial Memory Deficits in a Mouse Model of Autism and Intellectual Disability.	CC2D1B CC2D1A	2.69e-05	2	181	2	30732858
Pubmed	Gene and protein expressions of vimentin and desmin during embryonic development of the mylohyoid muscle.	VIM DES	2.69e-05	2	181	2	22476899
Pubmed	Balance between activities of Rho kinase and type 1 protein phosphatase modulates turnover of phosphorylation and dynamics of desmin/vimentin filaments.	DES ROCK1	2.69e-05	2	181	2	10574968
Pubmed	The deubiquitinase USP7 regulates oxidative stress through stabilization of HO-1.	HMOX1 USP7	2.69e-05	2	181	2	35821281
Pubmed	Interaction of surfactant protein A with the intermediate filaments desmin and vimentin.	VIM DES	2.69e-05	2	181	2	18407667
Pubmed	The Freud-1/CC2D1A family: transcriptional regulators implicated in mental retardation.	CC2D1B CC2D1A	2.69e-05	2	181	2	17394259
Pubmed	Transgenic mice carrying chimeric or mutated type III intermediate filament (IF) genes.	VIM DES	2.69e-05	2	181	2	9117989
Pubmed	Formation of cytoskeletal elements during mouse embryogenesis. Intermediate filaments of the cytokeratin type and desmosomes in preimplantation embryos.	VIM DES	2.69e-05	2	181	2	6161051
Pubmed	IGF-I: a mitogen also involved in differentiation processes in mammalian cells.	IGF1R PIK3R1	2.69e-05	2	181	2	8697095
Pubmed	Differential expression of IQGAP1/2 in Hepatocellular carcinoma and its relationship with clinical outcomes.	IQGAP2 IQGAP1	2.69e-05	2	181	2	24998570
Pubmed	Desmin is essential for the tensile strength and integrity of myofibrils but not for myogenic commitment, differentiation, and fusion of skeletal muscle.	VIM DES	2.69e-05	2	181	2	9314534
Pubmed	The Drosophila Notch inhibitor and tumor suppressor gene lethal (2) giant discs encodes a conserved regulator of endosomal trafficking.	CC2D1B CC2D1A	2.69e-05	2	181	2	17084358
Pubmed	IQGAP1 and IQGAP2 are reciprocally altered in hepatocellular carcinoma.	IQGAP2 IQGAP1	2.69e-05	2	181	2	20977743
Pubmed	A comparative immunohistochemical analysis of small round cell tumors of childhood: utility of peripherin and alpha-internexin as markers for neuroblastomas.	INA PRPH	2.69e-05	2	181	2	18528283
Pubmed	Phylogenetic relationships of the seven coat protein subunits of the coatomer complex, and comparative sequence analysis of murine xenin and proxenin.	COPA COPG2	2.69e-05	2	181	2	11530856
Pubmed	Unravelling of Hidden Secrets: The Tumour Suppressor Lethal (2) Giant Discs (Lgd)/CC2D1, Notch Signalling and Cancer.	CC2D1B CC2D1A	2.69e-05	2	181	2	33034024
Pubmed	Development of hepatocellular carcinoma in Iqgap2-deficient mice is IQGAP1 dependent.	IQGAP2 IQGAP1	2.69e-05	2	181	2	18180285
Pubmed	Loss of desmin triggers mechanosensitivity and up-regulation of Ankrd1 expression through Akt-NF-κB signaling pathway in smooth muscle cells.	DES ANKRD1	2.69e-05	2	181	2	22085644
Pubmed	Loss of the Intellectual Disability and Autism Gene Cc2d1a and Its Homolog Cc2d1b Differentially Affect Spatial Memory, Anxiety, and Hyperactivity.	CC2D1B CC2D1A	2.69e-05	2	181	2	29552027
Pubmed	Phosphorylation of vimentin by Rho-associated kinase at a unique amino-terminal site that is specifically phosphorylated during cytokinesis.	VIM ROCK1	2.69e-05	2	181	2	9565595
Pubmed	Comparison of TFII-I gene family members deleted in Williams-Beuren syndrome.	GTF2IRD2B GTF2IRD2	2.69e-05	2	181	2	15388857
Pubmed	Rho kinase regulates the survival and transformation of cells bearing oncogenic forms of KIT, FLT3, and BCR-ABL.	PIK3R1 ROCK1	2.69e-05	2	181	2	21907926
Pubmed	Interaction of p85 subunit of PI 3-kinase with insulin and IGF-1 receptors analysed by using the two-hybrid system.	IGF1R PIK3R1	2.69e-05	2	181	2	7589433
Pubmed	Paracrine Hedgehog signaling in stomach and intestine: new roles for hedgehog in gastrointestinal patterning.	VIM DES PRPH	2.95e-05	12	181	3	19445942
Pubmed	A protein interaction landscape of breast cancer.	DCAF13 EPPK1 ZNF148 MYO5B PABPC4 GSTM3 PIK3R1 CSNK2A2 USP7 SMU1 SMARCC1 FKBP5 HNRNPR	3.08e-05	634	181	13	34591612
Pubmed	Competitive binding of E3 ligases TRIM26 and WWP2 controls SOX2 in glioblastoma.	CCT3 PCNX3 PPFIBP2 SPTB LARS1 JPH2 HMOX1 HNRNPF RYR1 IQGAP1 USP7 RBM5 PRKCD NIN	3.25e-05	732	181	14	34732716
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	VIM COPA VEZF1 IQGAP2 COPG1 MATR3 MAZ PABPC4 MED31 CC2D1A IQGAP1 TAOK2 TRMT10C DROSHA CSNK2A2 SNRNP40 SMU1 RBM5 SMARCC1 NKAP	3.39e-05	1371	181	20	36244648
Pubmed	Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.	CCT3 MATR3 PABPC4 RGPD1 GTF2E1 CSNK2A2 SMARCC1 ROCK1 FKBP5 HNRNPR	4.14e-05	390	181	10	17643375
Interaction	PPP1CA interactions	PPP1R21 KIF13B SLK LEO1 MATR3 PABPC4 SFI1 NSRP1 HNRNPF AXIN1 IQGAP1 DES PPP1R2B INA RECQL4 PPP1R2C ASPM SNRNP40 PRKCD CEP126	3.10e-06	696	176	20	int:PPP1CA
Interaction	TRIM28 interactions	KIF13B VIM AMFR ZNF136 SLK DCAF13 EPPK1 COPA CCT3 VEZF1 IQGAP2 COPG1 MATR3 PABPC4 LARS1 COPG2 HNRNPF ZNF441 NUP35 IQGAP1 PPP4R3B SSU72 CSNK2A2 RGPD3 RECQL4 SMU1 SMARCC1 ZNF624 USP48 FKBP5 HNRNPR	4.15e-06	1474	176	31	int:TRIM28
Interaction	CIT interactions	VIM DHX36 ZNF136 DCAF13 EPPK1 COPA CCT3 MATR3 SPTB PABPC4 GRIN1 HNRNPF IQGAP1 DES TRMT10C OR4C15 INA RGPD3 SYNE2 SNRNP40 SMU1 RBM5 SMARCC1 CACNA1I SPAG17 CSPP1 PCID2 HNRNPR PRPH NIN	8.39e-06	1450	176	30	int:CIT
Interaction	HTT interactions	VIM AMFR EPPK1 CCT3 MYO5B MATR3 SPTB PABPC4 MED31 USP25 JPH2 GRIN1 COMMD3 AXIN1 IGF1R INA SRGAP3 SSU72 PIK3R1 CSNK2A2 PRKCD ROCK1 CEP126	9.19e-06	949	176	23	int:HTT
Interaction	KIF23 interactions	KIF13B VIM DHX36 EPPK1 COPA MYO5B MATR3 PABPC4 LARS1 COPG2 HNRNPF IQGAP1 GSTM3 DES TRMT10C DROSHA PIK3R1 CSNK2A2 ASPM USP7 HNRNPR NLRP13 PRPH NIN	1.13e-05	1031	176	24	int:KIF23
Interaction	RAD18 interactions	SLF1 LEO1 COPG1 SMC6 LARS1 SRGAP3 CSNK2A2 RECQL4 SNRNP40 USP7 SMU1 RBM5 SMARCC1 NKAP PCID2	1.22e-05	457	176	15	int:RAD18
Interaction	KRT72 interactions	VIM EPPK1 RYR1 DES INA PRPH	1.25e-05	59	176	6	int:KRT72
Interaction	GAN interactions	VIM CCT3 DNAH10 SPTB PABPC4 HNRNPF DES INA SYNE2 CSPP1 PRPH	1.45e-05	253	176	11	int:GAN
Interaction	CDC5L interactions	VIM SLK EPPK1 COPA CCT3 COPG1 MATR3 COPG2 SFI1 NIBAN2 TUBGCP2 HNRNPF IQGAP1 TRMT10C CSNK2A2 RECQL4 SNRNP40 USP7 SMU1 RBM5 HNRNPR	1.91e-05	855	176	21	int:CDC5L
Interaction	INA interactions	VIM GRIN1 IQGAP1 DES INA RECQL4 CCDC183 PRPH NIN	2.19e-05	173	176	9	int:INA
Interaction	VIM interactions	BICD2 VIM EPPK1 ZNF148 PPFIBP2 LARS1 CC2D1A HNRNPF IQGAP1 BLK DES INA KIF15 RECQL4 USP7 ROCK1 CEP126 BRD1 USP48 PRPH	2.55e-05	804	176	20	int:VIM
Interaction	SNW1 interactions	CCDC125 BICD2 VIM EPPK1 COPA CCT3 COPG1 MATR3 COPG2 NIBAN2 TUBGCP2 HNRNPF IQGAP1 GSTM3 STK10 SNRNP40 USP48 HNRNPR NIN	3.05e-05	747	176	19	int:SNW1
Interaction	YWHAG interactions	KIF13B VIM SLK RIPOR2 PPFIBP2 MATR3 MAZ PABPC4 CCDC18 IQGAP1 TAOK2 UNC119 IGF1R INA KIF15 PIK3R1 CSNK2A2 SYNE2 DENND2C RECQL4 PRKCD SH3BP5L NKAP BRD1 USP48 CSPP1	3.23e-05	1248	176	26	int:YWHAG
Interaction	DDX5 interactions	DHX36 CCT3 MATR3 PABPC4 HNRNPF NUP35 IQGAP1 GSTM3 DROSHA RECQL4 SNRNP40 USP7 SMU1 MAPK10 USP48 HNRNPR	4.03e-05	568	176	16	int:DDX5
Interaction	IRS1 interactions	VIM NIBAN2 IGF1R PIK3R1 CSNK2A2 USP7 PRKCD ROCK1	4.16e-05	145	176	8	int:IRS1
Interaction	MIR15A interactions	DHX36 MATR3 LARS1 HNRNPF TRMT10C HNRNPR	4.98e-05	75	176	6	int:MIR15A
Interaction	PDLIM3 interactions	BICD2 VIM RYR1 PRPH	5.21e-05	24	176	4	int:PDLIM3
Interaction	SNCA interactions	BICD2 VIM COPA IQGAP2 LARS1 HNRNPF STRIP1 GSTM3 INA SRGAP3 CSNK2A2 SYNE2 SNRNP40 USP7 SMU1 PRKCD HNRNPR PRPH	5.79e-05	716	176	18	int:SNCA
Interaction	PRMT1 interactions	VIM ZNF148 CCT3 MATR3 PABPC4 MED31 LARS1 CC2D1B TUSC1 HNRNPF AXIN1 INA CSNK2A2 RECQL4 SNRNP40 USP7 SMU1 RBM5 ROCK1 HNRNPR PRPH	6.37e-05	929	176	21	int:PRMT1
Interaction	CUL4B interactions	VIM AMFR DCAF13 MATR3 PABPC4 USP25 HNRNPF KIF15 CSNK2A2 RECQL4 SNRNP40 USP7 SMU1 SMARCC1 DNA2 USP48 HNRNPR PRPH	7.16e-05	728	176	18	int:CUL4B
Interaction	BRCA1 interactions	SDK2 SLF1 ZNF148 COPA CCT3 COPG1 MATR3 PABPC4 SMC6 LARS1 HNRNPF IQGAP1 GSTM3 DES GTF2E1 MYOZ1 PIK3R1 TPP1 RECQL4 SNRNP40 USP7 SMARCC1 BRD1 USP48 HNRNPR	8.86e-05	1249	176	25	int:BRCA1
Interaction	HSF1 interactions	COPA COPG1 MATR3 PABPC4 SMC6 LARS1 CC2D1A NSRP1 TRMT10C SSU72 SYNE2 SNRNP40 USP7 FKBP5 PCID2 HNRNPR	9.14e-05	609	176	16	int:HSF1
Interaction	DSP interactions	VIM DCAF13 PABPC4 LARS1 CASP10 HNRNPF RYR1 TAOK2 GSTM3 DES USP7 SMU1 PRPH	9.19e-05	423	176	13	int:DSP
Interaction	ECT2 interactions	VIM DHX36 EPPK1 COPA MYO5B MATR3 SPTB PABPC4 COPG2 NSRP1 HNRNPF IQGAP1 DES INA ASPM SNRNP40 USP7 DIO3 HNRNPR PRPH	9.96e-05	887	176	20	int:ECT2
Interaction	DUX4 interactions	VIM DHX36 COPA CCT3 PABPC4 LARS1 HNRNPF IQGAP1 DES	1.14e-04	214	176	9	int:DUX4
Interaction	SPTAN1 interactions	VIM DHX36 SPTB GRIN1 STRIP1 IQGAP1 DES PXDNL SYNE2 USP7 SMARCC1 USP48 FKBP5 HNRNPR	1.21e-04	496	176	14	int:SPTAN1
Interaction	CARM1 interactions	HNRNPF AXIN1 DES PXDNL DROSHA RECQL4 SCN4A SMARCC1 RORA SH3BP5L TRAPPC2L	1.40e-04	325	176	11	int:CARM1
Interaction	HEXIM1 interactions	VIM DHX36 COPA CCT3 MATR3 PABPC4 LARS1 COPG2 HNRNPF BLK GTF2IRD2B TRMT10C CSNK2A2 RECQL4 GTF2IRD2 SNRNP40 SMARCC1 SH3BP5L HNRNPR PRPH	1.47e-04	913	176	20	int:HEXIM1
Interaction	GLRA2 interactions	AMFR COPG1 NUP35 BLK	1.47e-04	31	176	4	int:GLRA2
Interaction	SYNM interactions	VIM DES PIK3R1 CSNK2A2 PRPH	1.51e-04	58	176	5	int:SYNM
Interaction	IPMK interactions	CSNK2A2 SNRNP40 PRPH	1.76e-04	13	176	3	int:IPMK
Interaction	HDAC6 interactions	VIM RIPOR2 EPPK1 COPA CCT3 COPG1 MYO5B MATR3 PABPC4 HNRNPF IQGAP1 GSTM3 DES IGF1R CSNK2A2 RECQL4 USP7 SMARCC1 BRD1 HNRNPR	1.85e-04	929	176	20	int:HDAC6
Interaction	IVNS1ABP interactions	VIM DHX36 CCT3 PABPC4 HNRNPF KLHL38 SYNE2 HNRNPR	1.88e-04	180	176	8	int:IVNS1ABP
GeneFamily	Intermediate filaments Type III	VIM DES PRPH	3.19e-06	5	125	3	610
GeneFamily	Ubiquitin specific peptidases	USP25 USP6 USP7 USP48	6.06e-04	56	125	4	366
Coexpression	HAMAI_APOPTOSIS_VIA_TRAIL_UP	DHX36 SLK SLF1 ZNF148 IQGAP2 SMC6 USP25 NSRP1 TRMT10C KIF15 BCAP29 SYNE2 ASPM RORA NKAP USP48 CSPP1 NIN	7.53e-07	656	181	18	M18979
Coexpression	GSE40273_EOS_KO_VS_WT_TREG_DN	ZNF148 VEZF1 USP25 SFI1 BLK STK10 USP7 CDK5RAP1 FKBP5	1.11e-05	200	181	9	M9130
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500_k-means-cluster#3	ATAD5 SMC6 CCDC18 KLHL32 NSRP1 PPP1R2B KIF15 SYNE2 ASPM ROCK1	3.89e-06	192	172	10	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500_K3
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_MedNas_2500_K1	DHX36 CUX2 RIPOR2 SLF1 IQGAP2 ATAD5 SMC6 KIAA1549 SFI1 PCGF3 PI15 NUP35 KIF15 SRGAP3 SYNE2 RECQL4 ASPM CCDC15 SMARCC1 SH3BP5L CEP126 BRD1 DNA2 CSPP1	5.06e-06	1060	172	24	facebase_RNAseq_e10.5_Emin_MedNas_2500_K1
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500_K1	DHX36 CUX2 SLF1 CENPN LEO1 CCT3 ATAD5 PPFIBP2 HS6ST2 SMC6 PCGF3 PI15 NSRP1 NUP35 PPP4R3B TRMT10C LIN37 KIF15 SNX25 ASPM USP7 SMARCC1 ZNF624 ROCK1 CEP126 DNA2	7.90e-06	1241	172	26	facebase_RNAseq_e10.5_MandArch_2500_K1
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2	DHX36 ADAM23 ATAD5 SMC6 CCDC18 NSRP1 KIF15 SYNE2 ASPM CCDC15 ZNF624 ROCK1	9.24e-06	311	172	12	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_MedNas_2500	DHX36 CUX2 RIPOR2 SLF1 IQGAP2 ATAD5 SMC6 KIAA1549 SFI1 PCGF3 ZNF804A PI15 PTGIR NUP35 GSTM3 KIF15 SRGAP3 SYNE2 RECQL4 ASPM NECTIN4 CCDC15 SMARCC1 SH3BP5L CEP126 BRD1 DNA2 CSPP1	9.72e-06	1414	172	28	facebase_RNAseq_e10.5_Emin_MedNas_2500
CoexpressionAtlas	FacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_1000_k-means-cluster#4	SLK ATAD5 KLHL32 PPP1R2B GTF2E1 SYNE2 ZNF624 BRD1 CSPP1	4.28e-05	203	172	9	Facebase_RNAseq_e9.5_Mandibular Arch_1000_K4
CoexpressionAtlas	facebase_RNAseq_e10.5_MandArch_2500	DHX36 CUX2 SLF1 CENPN LEO1 CCT3 ATAD5 PPFIBP2 HS6ST2 SMC6 PCGF3 PI15 PTGIR NSRP1 NUP35 PPP4R3B TRMT10C LIN37 KIF15 SNX25 ASPM USP7 SMARCC1 ZNF624 ROCK1 CEP126 DNA2	5.20e-05	1468	172	27	facebase_RNAseq_e10.5_MandArch_2500
CoexpressionAtlas	dev lower uro neuro_e15.5_BladdPelvicGanglion_Sox10_k-means-cluster#1_top-relative-expression-ranked_100	CUX2 ZNF804A INA MAPK10	7.31e-05	28	172	4	gudmap_dev lower uro neuro_e15.5_BladdPelvicGanglion_Sox10_k1_100
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3	DHX36 SLF1 CENPN LEO1 ATAD5 SMC6 KIAA1549 PCGF3 NSRP1 PPP4R3B TRMT10C KIF15 SYNE2 RECQL4 ASPM USP7 SMARCC1 ZNF624 ROCK1 PNPLA7 CEP126 BRD1 DNA2 CSPP1	8.02e-05	1257	172	24	facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlas	dev lower uro neuro_e14.5_BladdPelvicGanglion_Sox10_k-means-cluster#1_top-relative-expression-ranked_200	CUX2 ADAM23 ZNF804A CHRNA5 INA	8.25e-05	55	172	5	gudmap_dev lower uro neuro_e14.5_BladdPelvicGanglion_Sox10_k1_200
CoexpressionAtlas	facebase_RNAseq_e10.5_Emin_LatNas_2500	DHX36 SLF1 CENPN LEO1 ATAD5 SMC6 KIAA1549 PCGF3 PI15 NSRP1 GSTM3 PPP4R3B TRMT10C KIF15 SYNE2 RECQL4 ASPM USP7 SMARCC1 ZNF624 ROCK1 PNPLA7 CEP126 BRD1 DNA2 CSPP1	1.22e-04	1459	172	26	facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlas	DevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#1_top-relative-expression-ranked_500	CUX2 ADAM23 ZNF804A INA MAPK10 PRPH	1.31e-04	96	172	6	gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_500_k1
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#5	PPP1R21 DHX36 SLF1 ADAM23 ATAD5 SMC6 PCGF3 KLHL32 TUSC1 NSRP1 PPP1R2B KIF15 SYNE2 ASPM RBM5 CCDC15 NKAP USP48	1.46e-04	831	172	18	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K5
CoexpressionAtlas	DevelopingGonad_e11.5_ovary + mesonephros_emap-3226_top-relative-expression-ranked_500	DHX36 ZNF148 COPA CCT3 ZNF804A SYNE2 ASPM RBM5 SMARCC1 ROCK1 CSPP1 HNRNPR	1.58e-04	417	172	12	gudmap_developingGonad_e11.5_ovary + mesonephros_500
CoexpressionAtlas	FacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_500	ATAD5 SMC6 CCDC18 KLHL32 NSRP1 PPP1R2B INA KIF15 SRGAP3 SYNE2 ASPM ROCK1 MAPK10	2.19e-04	498	172	13	Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_500
CoexpressionAtlas	kidney_P3_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_1000	ZCCHC18 CUX2 SDK2 CENPN ATAD5 KLHL32 KIF15 ASPM CEP126 NIN	2.65e-04	316	172	10	gudmap_kidney_P3_CapMes_Crym_k4_1000
CoexpressionAtlas	skeletal muscle	SMCO1 SPTB JPH2 RYR1 KLHL38 USP6 DES MYOZ1 DENND2C SCN4A	2.92e-04	320	172	10	skeletal muscle
ToppCell	droplet-Liver-Hepatocytes-24m-Myeloid\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB DNAH10 SMCO1 SFI1 KLHL32 IQGAP1 STK10 SNX25 PRKCD	1.63e-08	157	180	9	ec433d2fe827abdb647be4176c231b7052482b6f
ToppCell	Smart-seq2-thymus_(Smart-seq2)-myeloid\|thymus_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	CYBB VIM IQGAP2 CXCL16 IQGAP1 STK10 CST3 ROCK1 FKBP5	1.20e-07	198	180	9	2e470249edc7cf85bed550795ff84cbef22895c0
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22_no-steroids-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c13-MKI67-CCL5_l\|Severe-critical_progression_d12-22_no-steroids / Compartment, severity and other cell annotations on 10x 3' data (130k)	CENPN MYO5B POLE2 SMCO1 MAZ KIF15 RECQL4 ASPM	4.53e-07	169	180	8	481e611b5fface58f1630f206c0b04fb54e24011
ToppCell	facs-Lung-18m-Hematologic-myeloid-myeloid_dendritic_cell-dendritic_type_2\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	IQGAP2 PPFIBP2 CXCL16 RYR1 UNC119 SRGAP3 CST3 DNA2	7.00e-07	179	180	8	b7a2429d07d7146b32b3552a5f2a2542105a71e0
ToppCell	facs-Brain_Non-Myeloid-Striatum-24m-Epithelial-nan\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	EPPK1 TTLL3 DNAH10 PI15 KLHL38 SPAG17 CSPP1 DRC3	8.62e-07	184	180	8	264e14aa1859cfc0ed5fb40e97ea189aed9ef4a5
ToppCell	facs-Brain_Non-Myeloid-Striatum-24m-Epithelial\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	EPPK1 TTLL3 DNAH10 PI15 KLHL38 SPAG17 CSPP1 DRC3	8.62e-07	184	180	8	d7eccbd21c480d907fdc8eff2bf5ae22ae452221
ToppCell	facs-Brain_Non-Myeloid-Striatum-24m-Epithelial-neuroepithelial_cell\|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	EPPK1 TTLL3 DNAH10 PI15 KLHL38 SPAG17 CSPP1 DRC3	8.62e-07	184	180	8	22010cfe0428ebfa40952cc1a1a12ad3d25b35c9
ToppCell	Smart-seq2-lymph_node_(Smart-seq2)-lymphocytic-T_lymphocytic-effector_CD4-positive,_alpha-beta_T_cell\|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	IQGAP2 ADAM23 MATR3 PIK3R1 SYNE2 SMU1 RORA FKBP5	9.73e-07	187	180	8	e61c1755531469dd3850c9740474b5ad4e0499c1
ToppCell	NS-moderate-d_0-4\|moderate / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	DNAH10 DNAH2 SRGAP3 CEP126 SPAG17 MAPK10 CSPP1 DRC3	1.23e-06	193	180	8	ea345d34440b25f65358a53dc72831998d1c3620
ToppCell	cycling_basal_cell\|World / shred by cell class for nasal brushing	CENPN ATAD5 POLE2 CCDC18 CHRNA5 KIF15 ASPM DNA2	1.38e-06	196	180	8	aa7bac70a2fe4a3cb28d89fa1a87c68c2ead1349
ToppCell	3'-Parenchyma_lung-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH10 DNAH2 SYNE2 CEP126 SPAG17 MAPK10 CSPP1 DRC3	1.44e-06	197	180	8	74a2c6cb8fcfe53dd9a2b36492a16c58f38e51c9
ToppCell	facs-Tongue-nan-3m-Epithelial\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AMFR EPPK1 COPA MATR3 HNRNPF IQGAP1 PPP4R3B TM9SF2	1.49e-06	198	180	8	2f03f8897dd7cce6d8296638e14e11ec16bcf624
ToppCell	facs-Tongue-nan-3m\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AMFR EPPK1 COPA MATR3 HNRNPF IQGAP1 PPP4R3B TM9SF2	1.49e-06	198	180	8	f2a4057f038ef7225a5b98a7ab068c30dff4eadd
ToppCell	PBMC-Mild-Lymphocyte-T/NK-Other_T\|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)	CENPN ATAD5 POLE2 KIF15 SYNE2 RECQL4 ASPM RORA	1.55e-06	199	180	8	101f78fe6dd1bf9e2e4dd5ad8a970312b3540927
ToppCell	PBMC-Mild-Lymphocyte-T/NK-Other_T\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	CENPN ATAD5 POLE2 KIF15 SYNE2 RECQL4 ASPM RORA	1.55e-06	199	180	8	e0fcec796afe75e42467ca86355b9fc5aa9ae0a1
ToppCell	Thalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cnn1_(Mural.Rgs5Acta2.Cnn1)-\|Thalamus / BrainAtlas - Mouse McCarroll V32	JPH2 PI15 PTGIR KLHL38 GSTM3 DES	1.66e-06	89	180	6	442931182f7eb87f16c19774607eb14b44cd7ec7
ToppCell	Thalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cnn1_(Mural.Rgs5Acta2.Cnn1)\|Thalamus / BrainAtlas - Mouse McCarroll V32	JPH2 PI15 PTGIR KLHL38 GSTM3 DES	1.66e-06	89	180	6	2c19e2dc979d0f86539a044ae49f126caff50fbb
ToppCell	Thalamus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1\|Thalamus / BrainAtlas - Mouse McCarroll V32	JPH2 PI15 PTGIR KLHL38 GSTM3 DES	1.66e-06	89	180	6	05ba2c31bb4bd8c7ad4bcbbefe818c08136101b2
ToppCell	renal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Distal_tubule_epithelial_cell-kidney_distal_convoluted_tubule_epithelial_cell_cycling-Cycling_Distal_Convoluted_Tubule_Cell_low-phase\|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group	ADAM23 HS6ST2 INA KIF15 MYOZ1 ASPM CCDC183	2.02e-06	144	180	7	f6061dd965a2b2fe6ad864f8aecc06d2e74881ce
ToppCell	droplet-Lung-nan-3m-Myeloid-Nonclassical_Monocyte\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB SMC6 RYR1 UNC119 STK10 CST3 PRKCD	3.02e-06	153	180	7	6dcab3d50ab50051955204dc4e4a64c1ca855bcd
ToppCell	droplet-Lung-nan-3m-Myeloid-non-classical_monocyte\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB SMC6 RYR1 UNC119 STK10 CST3 PRKCD	3.02e-06	153	180	7	f6ef14d949107c08cb3690e26ec91e194cb43518
ToppCell	PND14-Immune-Immune_Myeloid-DC-cDC2-cDC2_prolif\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	CENPN TUBGCP2 KIF15 SRGAP3 CST3 DNA2 FKBP5	3.44e-06	156	180	7	8349604bd801e20d33770f7d8243598c3756302b
ToppCell	facs-Brain_Myeloid-Cerebellum-24m-Myeloid-macrophage\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB VIM IQGAP2 PTGIR RYR1 IQGAP1 UNC119	4.07e-06	160	180	7	1f7acdc8b08152d5817fc53bbf47b4a22d9c91b5
ToppCell	droplet-Liver-Hepatocytes-24m-Myeloid-Kupffer_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DNAH10 ATAD5 SMCO1 SFI1 KLHL32 STK10 SNX25	4.60e-06	163	180	7	8dc0128eeede933537e3bcc5d6ec0322711552f3
ToppCell	droplet-Liver-Hepatocytes-24m-Myeloid-Kupffer_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	DNAH10 ATAD5 SMCO1 SFI1 KLHL32 STK10 SNX25	4.60e-06	163	180	7	fd243ca223079033be480a24817a399f281fa4d4
ToppCell	droplet-Kidney-nan-24m-Myeloid-nan\|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB SMC6 DNAH2 RYR1 UNC119 STK10 CST3	5.39e-06	167	180	7	2ee1660be117e20f24557522345572d11cbee813
ToppCell	droplet-Lung-LUNG-30m-Myeloid-Nonclassical_Monocyte\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB SMC6 RYR1 UNC119 STK10 CST3 PRKCD	5.83e-06	169	180	7	411556e93adcbb7e4d79b02f3dc72963ec8a0759
ToppCell	droplet-Lung-LUNG-30m-Myeloid-non-classical_monocyte\|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB SMC6 RYR1 UNC119 STK10 CST3 PRKCD	5.83e-06	169	180	7	39b1acfd099abb9de18c29c05c7a67709ea76775
ToppCell	renal_cortex_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_S-high\|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group	CENPN ATAD5 POLE2 KCNB2 KIF15 RECQL4 ASPM	5.83e-06	169	180	7	0bc8ef341ce307b19018d4ac8de0a4d04254209d
ToppCell	3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH10 DNAH2 CEP126 SPAG17 MAPK10 CSPP1 DRC3	5.83e-06	169	180	7	14aadc2d1bf66eb47dac33b4d61ddb3c942caa4f
ToppCell	368C-Epithelial_cells-Epithelial-J_(AT1-AT2_progenitors)\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	ATAD5 POLE2 CCDC18 COPG2 CHRNA5 KIF15 ASPM	6.79e-06	173	180	7	20889aa85e36ad3bafdb91b91e43964493c949f9
ToppCell	368C-Epithelial_cells-Epithelial-J_(AT1-AT2_progenitors)-\|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)	ATAD5 POLE2 CCDC18 COPG2 CHRNA5 KIF15 ASPM	6.79e-06	173	180	7	46e601b7938b1dd0aa3df7aa056c4bd07b1620c1
ToppCell	NS-moderate-d_0-4-Lymphoid-NKT-proliferating\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	CENPN POLE2 CHRNA5 LIN37 KIF15 RECQL4 ASPM	7.89e-06	177	180	7	174c54acfe19e2bb31418d69e228032ba724cbb6
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c11-MKI67-FOS\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	CENPN ATAD5 KIF15 RECQL4 ASPM ZNF624 DNA2	8.49e-06	179	180	7	ac987c9425a1b4106d1b8779a2c5461383eae2ae
ToppCell	facs-Lung-18m-Hematologic-lymphocytic-B_cell\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CYBB SEMA4B RIPOR2 BLK SCN4A CACNA1I SP140	1.02e-05	184	180	7	eb41dce59eb0384c1671fbc76eb15daab2c8c49a
ToppCell	facs-Lung-18m-Hematologic-lymphocytic-B_cell-B_cell\|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	CYBB SEMA4B RIPOR2 BLK SCN4A CACNA1I SP140	1.02e-05	184	180	7	991500a874c5dd0d9111399520071da67bc6ac3d
ToppCell	facs-Liver-Liver_non-hepato/SCs-18m-Lymphocytic-B_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RIPOR2 HNRNPF IQGAP1 BLK SCN4A CACNA1I SP140	1.09e-05	186	180	7	6b2d15e2756d4d4d68ad600e4a6c074edc3488f2
ToppCell	facs-Liver-Liver_non-hepato/SCs-18m-Lymphocytic-B_cell\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	RIPOR2 HNRNPF IQGAP1 BLK SCN4A CACNA1I SP140	1.09e-05	186	180	7	a8fcb440d88770f95678c5d28413fc4d847f42a8
ToppCell	Control-T_cells\|Control / group, cell type (main and fine annotations)	RIPOR2 IQGAP2 STK10 SYNE2 BIN2 FKBP5 SP140	1.13e-05	187	180	7	f4e8e0eba58da89b56587667555a5d4754e108c7
ToppCell	facs-Heart-LA/RA-3m-Mesenchymal\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SMCO1 SPTB PABPC4 KLHL32 KLHL38 ANKRD1 MAPK10	1.17e-05	188	180	7	90dc0e15798d0b984518ad58c7e416e30aff687a
ToppCell	facs-Heart-LA/RA-3m-Mesenchymal-atrial_myocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SMCO1 SPTB PABPC4 KLHL32 KLHL38 ANKRD1 MAPK10	1.17e-05	188	180	7	f63dfd076ced81013918363282ae25cbbd8948ae
ToppCell	facs-Heart-LA/RA-3m-Mesenchymal-atrial_cardiomyocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SMCO1 SPTB PABPC4 KLHL32 KLHL38 ANKRD1 MAPK10	1.17e-05	188	180	7	0554d542149cef654ff1e5e32dfbffd8990b52bd
ToppCell	facs-Heart-LA/RA-3m\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SMCO1 SPTB PABPC4 KLHL32 KLHL38 ANKRD1 MAPK10	1.21e-05	189	180	7	a08b2d0fa35ffa510050ecffdc68e1b79bbe1632
ToppCell	facs-Heart-LA/RA\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SMCO1 SPTB PABPC4 KLHL32 KLHL38 ANKRD1 MAPK10	1.21e-05	189	180	7	efa913d9c16fc32166b484d92b6449e8a0c59e03
ToppCell	COPD-Epithelial-Ciliated\|Epithelial / Disease state, Lineage and Cell class	DNAH10 DNAH2 KLHL32 CEP126 SPAG17 MAPK10 DRC3	1.21e-05	189	180	7	3e77883db34722b9ce0a03ea74caefc92dc7feff
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	IQGAP2 SYNE2 RORA BRD1 FKBP5 SP140 NIN	1.25e-05	190	180	7	91ba66d4b56c59523485b17738e93f14bb00afa4
ToppCell	Dividing_Macrophages-HP_01\|World / lung cells shred on cell class, cell subclass, sample id	CENPN ATAD5 CHRNA5 KIF15 RECQL4 ASPM CCDC15	1.29e-05	191	180	7	3e567ed6b5fefafa7f460e49d25d60bb52a0a6c8
ToppCell	Control-Epithelial_alveolar-Mes-Like-Differentiating_AT1\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	DNAH10 MYO5B RAB44 CHRNA5 ANKRD1 DRC3	1.31e-05	127	180	6	556aaf88719c83f307fa50dfac151136ed05c8ad
ToppCell	IPF-Epithelial-Ciliated\|IPF / Disease state, Lineage and Cell class	DNAH10 DNAH2 KLHL32 CEP126 SPAG17 MAPK10 DRC3	1.34e-05	192	180	7	354adc1354bf596fbc60dd45c0169688e6f45165
ToppCell	droplet-Heart-nan-18m-Mesenchymal-cardiomyocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SPTB PABPC4 JPH2 KLHL38 DES ANKRD1 MAPK10	1.34e-05	192	180	7	0bf99e029a06151092db1e8a0dcb45f4e688e771
ToppCell	droplet-Heart-nan-24m-Mesenchymal-cardiomyocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MYO5B SPTB PABPC4 JPH2 DES ANKRD1 MAPK10	1.34e-05	192	180	7	f6a4e348406a852ace9fb21db8fbdff539217645
ToppCell	droplet-Heart-nan-24m-Mesenchymal-atrial_cardiomyocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	MYO5B SPTB PABPC4 JPH2 DES ANKRD1 MAPK10	1.34e-05	192	180	7	1a0c25106ae08eac912a4edd5fc1a3ee776f69c2
ToppCell	droplet-Heart-nan-18m-Mesenchymal-atrial_cardiomyocyte\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SPTB PABPC4 JPH2 KLHL38 DES ANKRD1 MAPK10	1.34e-05	192	180	7	d766221acfce30cbf2c60b3ae40f6744968b952c
ToppCell	IPF-Epithelial-Ciliated\|Epithelial / Disease state, Lineage and Cell class	DNAH10 DNAH2 KLHL32 CEP126 SPAG17 MAPK10 DRC3	1.38e-05	193	180	7	ad58f5080e0ba65c845056ea6b79037b636e9c64
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c14-MKI67-CCL5_h\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	CENPN ATAD5 POLE2 KIF15 RECQL4 ASPM DNA2	1.38e-05	193	180	7	cf680afddc08b6481f1b3eee9c57acfaebeac6f0
ToppCell	3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH10 DNAH2 CEP126 SPAG17 MAPK10 CSPP1 DRC3	1.43e-05	194	180	7	4a2c127c90d1fefe604fcb9e796577d21b489dd6
ToppCell	3'_v3-blood-Lymphocytic_NK-Cycling_NK\|blood / Manually curated celltypes from each tissue	CENPN ATAD5 POLE2 KIF15 RECQL4 ASPM DNA2	1.43e-05	194	180	7	bf9734abaad603ade2a6a6940918aaf1e1c4e2cd
ToppCell	Control-Lymphoid_T/NK-T/NK_proliferative\|Control / Disease group, lineage and cell class	CENPN ATAD5 POLE2 KIF15 RECQL4 ASPM DNA2	1.43e-05	194	180	7	9bbb124001fba7450f4639f47f9b720a483e7242
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	SLF1 ATAD5 POLE2 KIF15 RECQL4 CCDC15 DNA2	1.48e-05	195	180	7	cec7df321f372d05c94f97d6bb18891a5cc3dec3
ToppCell	COVID-19-T_cells-Cycling_NK/T_cells\|COVID-19 / group, cell type (main and fine annotations)	ATAD5 POLE2 SPTB CCDC18 KIF15 ASPM DNA2	1.48e-05	195	180	7	764ed100c28d9bc93ee5ecabc5291c8f184d78da
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	SLF1 ATAD5 POLE2 KIF15 RECQL4 CCDC15 DNA2	1.48e-05	195	180	7	56d8734d020b3da08a5aa9e67999706a9e023a99
ToppCell	COVID-19-Epithelial-Ciliated_cells\|Epithelial / Condition, Lineage and Cell class	DNAH10 DNAH2 CEP126 SPAG17 MAPK10 CSPP1 DRC3	1.53e-05	196	180	7	de7aa31354b019d7321a8ef965d59ce2e8b89276
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_cycling-mes_proliferating1_(3)\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	SLF1 ATAD5 POLE2 KIF15 RECQL4 CCDC15 DNA2	1.53e-05	196	180	7	df366d76ea55f49e349d622effa57c1535df8400
ToppCell	PCW_13-14-Mesenchymal-Mesenchymal_cycling\|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung	CENPN ATAD5 POLE2 KIF15 ASPM CCDC15 DNA2	1.53e-05	196	180	7	1d2e0b328eb822db7521b5f5724d4bd17c0bad5f
ToppCell	myeloid\|World / Lineage and Cell class	CYBB VIM CXCL16 HMOX1 IQGAP1 TPP1 CST3	1.53e-05	196	180	7	c76af19827917b9f64ed9fff449f34d04e080a2a
ToppCell	COVID-19_Mild-Classical_Monocyte-cMono_3\|Classical_Monocyte / Disease condition and Cell class	CYBB RIPOR2 IQGAP2 MATR3 NIBAN2 IQGAP1 FKBP5	1.53e-05	196	180	7	15397ec27167bb2fb6fec120b68bf38fc71b2670
ToppCell	IPF-Epithelial\|IPF / Disease state, Lineage and Cell class	DNAH10 MYO5B KLHL32 SRGAP3 CEP126 SPAG17 MAPK10	1.53e-05	196	180	7	87d9881cfec461a5d89b688a83749b618c519485
ToppCell	facs-Trachea-3m\|Trachea / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	AMFR COPA COPG1 MATR3 TM9SF2 PIK3R1 FKBP5	1.58e-05	197	180	7	e77016d64b1cac9825fec7cfe5071f1567401187
ToppCell	facs-Trachea-nan-3m\|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AMFR COPA COPG1 MATR3 TM9SF2 PIK3R1 FKBP5	1.58e-05	197	180	7	0353d925ee4b7aefc2c51b5fab873f465cdf9ebc
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_cycling-mes_proliferating3_(7)\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	CENPN ATAD5 KIF15 RECQL4 ASPM CCDC15 DNA2	1.58e-05	197	180	7	84ed777cdba569200a3ef1654d8a12f17fcfb7f1
ToppCell	PCW_10-12-Mesenchymal-Mesenchymal_cycling\|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung	CENPN ATAD5 POLE2 KIF15 ASPM CCDC15 DNA2	1.58e-05	197	180	7	8b616cde333bdbc0c591035ad9e4949155866245
ToppCell	LPS_only-Endothelial-Endothelial-FOXM1\|LPS_only / Treatment groups by lineage, cell group, cell type	ATAD5 POLE2 RYR1 PPP4R3B KIF15 ASPM FASTKD3	1.58e-05	197	180	7	038fd92750257d43d5e980fd06d77742b543f11a
ToppCell	proximal-3-Hematologic-Proliferating_NK/T\|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CENPN ATAD5 POLE2 KIF15 ASPM CCDC15 PRPH	1.63e-05	198	180	7	2777c5efe84ce3dbbe6175ecc1c987bc816ab74b
ToppCell	proximal-Hematologic-Proliferating_NK/T-3\|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CENPN ATAD5 POLE2 KIF15 ASPM CCDC15 PRPH	1.63e-05	198	180	7	2e121899f58a5024e26441bd326aac12c37fe6d1
ToppCell	Smart-start-Cell-Wel_seq-Neoplastic-Stem-like-OPC-like-OPC-like-E\|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group	EPPK1 CFAP298 NSRP1 BLK CEP126 SPAG17 DRC3	1.63e-05	198	180	7	1847ce8c344c8a3e50f3cbbf758a38aba69f85b0
ToppCell	Tracheal-10x5prime-Stromal-Myofibroblastic-Muscle_smooth_airway_ASM\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	SPTB JPH2 KCNB2 PI15 DES FKBP5 PRPH	1.63e-05	198	180	7	1e1ea54f0c234f3b6d29064c4881d8a0c0949a75
ToppCell	proximal-Hematologic-Proliferating_NK/T\|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CENPN ATAD5 POLE2 KIF15 ASPM CCDC15 PRPH	1.63e-05	198	180	7	6c894fda309ec3d4bb446f63d5dde4e7f8c4fd89
ToppCell	(09)_Interm._secr.>cil.-(2)_GFP_FOXI1\|(09)_Interm._secr.>cil. / shred by cell type by condition	IQGAP2 MATR3 NSRP1 IQGAP1 SYNE2 ROCK1 CSPP1	1.69e-05	199	180	7	fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	MATR3 SMC6 USP25 NSRP1 PIK3R1 SYNE2 ROCK1	1.69e-05	199	180	7	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	Bronchial-NucSeq-Epithelial-Epi_alveolar-Dividing_AT2\|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations	ATAD5 POLE2 KIF15 RECQL4 ASPM CCDC15 DNA2	1.69e-05	199	180	7	1d5a3366474c17e3df0ba5cf11b586655529e9bd
ToppCell	Tracheal-10x5prime-Stromal-Myofibroblastic-Muscle_smooth_systemic_arterial\|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations	SPTB TRPC4 JPH2 PI15 DES MYOZ1 PRPH	1.69e-05	199	180	7	c2903b1a4b91e94bbdaa909bacefe901255cf248
ToppCell	COVID-19_Severe-T/NK_proliferative\|COVID-19_Severe / disease group, cell group and cell class	CENPN ATAD5 POLE2 KIF15 RECQL4 ASPM CCDC15	1.69e-05	199	180	7	af78837f3a7641a5bd98765eef9cb4f86034048c
ToppCell	LPS_anti-TNF-Endothelial-Endothelial-FOXM1\|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type	CENPN ATAD5 CCDC18 KIF15 SYNE2 ASPM CCDC15	1.69e-05	199	180	7	98575fcce726589e93fbb4df1aab03e57cb56076
ToppCell	facs-Tongue-nan-3m-Epithelial-nan\|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AMFR EPPK1 COPA MATR3 HNRNPF IQGAP1 TM9SF2	1.69e-05	199	180	7	8d50e1ee58710d896c0204937331d9f4dcd38de0
ToppCell	Control_saline-Hematopoietic_Myeloid-Dendritic_cells-pDC\|Control_saline / Treatment groups by lineage, cell group, cell type	CYBB IQGAP2 SPTB BLK UNC119 PRKCD BIN2	1.69e-05	199	180	7	34b95e27581bb127e0b921e9c068dc094cb86b37
ToppCell	Biopsy_Control_(H.)-Immune-Proliferating_Macrophages\|Biopsy_Control_(H.) / Sample group, Lineage and Cell type	CENPN ATAD5 CCDC18 KIF15 RECQL4 ASPM DNA2	1.74e-05	200	180	7	ce9fad55f779afd3d6c5a9c5a15e2d9f548b7c7e
ToppCell	Biopsy_Other_PF-Immune-Proliferating_Macrophages\|Biopsy_Other_PF / Sample group, Lineage and Cell type	CENPN ATAD5 POLE2 KIF15 RECQL4 ASPM DNA2	1.74e-05	200	180	7	61473e8613f39a92002d5b631e6bd563735566e4
ToppCell	Control-Control-Lymphocyte-T/NK-T/NK_proliferative\|Control / Disease, condition lineage and cell class	CENPN ATAD5 POLE2 KIF15 RECQL4 ASPM DNA2	1.74e-05	200	180	7	6cf63dd57f6bc0c42e7182322dd24ff9afbe9186
ToppCell	control\|World / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	SLK NIBAN2 IGF1R SRGAP3 SYNE2 DENND2C NECTIN4	1.74e-05	200	180	7	97f36d2c197e03d93a1fc59949d77ae90f6e6a9a
ToppCell	Non-neuronal-Dividing-IPC\|World / Primary Cells by Cluster	VIM CENPN ATAD5 CCDC18 KIF15 SYNE2 ASPM	1.74e-05	200	180	7	971533181daa1bfac1f1b8c507d2013f891f9078
ToppCell	NS-control\|NS / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	SLK NIBAN2 IGF1R SRGAP3 SYNE2 DENND2C NECTIN4	1.74e-05	200	180	7	ecbe89ff95d046155b984c8c150e0b9e7278f839
ToppCell	distal-3-Hematologic-Proliferating_Macrophage\|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	CENPN ATAD5 POLE2 CHRNA5 KIF15 RECQL4 ASPM	1.74e-05	200	180	7	1b65c97e8123d0572d31525d6a10bc7f16857959
ToppCell	3'_v3-GI_small-bowel-Lymphocytic_T_CD4-Tfh\|GI_small-bowel / Manually curated celltypes from each tissue	EPPK1 ADAM23 RGPD1 CACNA1I DNA2 FKBP5	1.77e-05	134	180	6	bf94ce5edde8912a27010e229c313d8102d6de62
ToppCell	Control-Myeloid-Dendritic_cells-pDC\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	CYBB CUX2 BLK PRKCD CCDC183 SP140	2.77e-05	145	180	6	bab85a72142b6257f7d424e5301f65b6dcdf745d
ToppCell	facs-Brain_Myeloid-Cerebellum\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB VIM IQGAP2 IQGAP1 UNC119 DNA2	4.17e-05	156	180	6	28c4fb4d2c6c47696c3a6722998f9da5a8923323
ToppCell	facs-Brain_Myeloid-Striatum_-18m-Myeloid-macrophage\|Brain_Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation	VIM RIPOR2 PTGIR RAB44 IQGAP1 UNC119	4.32e-05	157	180	6	9d4308312301cb922f156a7b6aededc9e1c62807
ToppCell	facs-Trachea-nan-3m-Myeloid-lymphocyte_of_B_lineage\|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation	CYBB SEMA4B ATAD5 KIF15 SCN4A ASPM	4.32e-05	157	180	6	0fecc14959c4c9efc19d5c06475a890e0a30f148
ToppCell	Hippocampus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cnn1_(Mural.Rgs5Acta2.Cnn1)\|Hippocampus / BrainAtlas - Mouse McCarroll V32	JPH2 PTGIR KLHL38 GSTM3 DES	4.41e-05	96	180	5	f31bed26ed9bcaf82d443de304372991136b11e7
ToppCell	Hippocampus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Cnn1_(Mural.Rgs5Acta2.Cnn1)-\|Hippocampus / BrainAtlas - Mouse McCarroll V32	JPH2 PTGIR KLHL38 GSTM3 DES	4.41e-05	96	180	5	31ed9e073e30d740b46c8b3f01ba0de94a701995
ToppCell	Hippocampus-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1\|Hippocampus / BrainAtlas - Mouse McCarroll V32	JPH2 PTGIR KLHL38 GSTM3 DES	4.41e-05	96	180	5	cd0b9812727cad937cf840360a87a2382e570d39
Disease	1-stearoylglycerol 1-monostearin measurement	KIAA1549 SYNE2	3.34e-05	2	171	2	EFO_0021111
Disease	intracranial vasospasm (is_implicated_in)	HMOX1 RYR1	3.34e-05	2	171	2	DOID:13100 (is_implicated_in)
Disease	pulmonary hypertension (biomarker_via_orthology)	CYBB VIM HMOX1 RYR1 HYAL2	1.04e-04	80	171	5	DOID:6432 (biomarker_via_orthology)
Disease	Amyotrophic Lateral Sclerosis, Familial	VIM INA CST3 PRPH	1.74e-04	48	171	4	C4551993
Disease	Amyotrophic Lateral Sclerosis, Sporadic	VIM INA CST3 PRPH	1.74e-04	48	171	4	C1862941
Disease	Cholestasis, progressive familial intrahepatic 1	MYO5B ATP8B1	1.99e-04	4	171	2	C4551898
Disease	motor function measurement, response to levodopa	NIBAN2 STK10	1.99e-04	4	171	2	EFO_0010747, EFO_0010749
Disease	AMYOTROPHIC LATERAL SCLEROSIS 1	VIM INA CST3 PRPH	2.04e-04	50	171	4	C1862939
Disease	Acute Confusional Senile Dementia	AMFR HMOX1 IGF1R TPP1 CST3	2.84e-04	99	171	5	C0546126
Disease	Alzheimer's Disease, Focal Onset	AMFR HMOX1 IGF1R TPP1 CST3	2.84e-04	99	171	5	C0750900
Disease	Alzheimer Disease, Early Onset	AMFR HMOX1 IGF1R TPP1 CST3	2.84e-04	99	171	5	C0750901
Disease	Presenile dementia	AMFR HMOX1 IGF1R TPP1 CST3	2.84e-04	99	171	5	C0011265
Disease	Alzheimer Disease, Late Onset	AMFR HMOX1 IGF1R TPP1 CST3	2.84e-04	99	171	5	C0494463
Disease	Familial Alzheimer Disease (FAD)	AMFR HMOX1 IGF1R TPP1 CST3	2.98e-04	100	171	5	C0276496
Disease	Alzheimer's Disease	AMFR HMOX1 IGF1R TPP1 CST3	3.12e-04	101	171	5	C0002395
Disease	Lennox-Gastaut syndrome	CUX2 MAPK10	4.93e-04	6	171	2	C0238111
Disease	hyperthyroidism (biomarker_via_orthology)	VIM HMOX1 IGF1R	5.63e-04	28	171	3	DOID:7998 (biomarker_via_orthology)
Disease	Pilomyxoid astrocytoma	KIAA1549 SRGAP3	6.88e-04	7	171	2	C1519086
Disease	Alzheimer's disease (is_marker_for)	VIM GRIN1 HMOX1 GSTM3 IGF1R CST3 MAPK10	7.82e-04	257	171	7	DOID:10652 (is_marker_for)
Disease	tonsillectomy risk measurement	ADAM23 CFAP298 SLC45A4 PXDNL PIK3R1 ZNF624 CSPP1	8.37e-04	260	171	7	EFO_0007924
Disease	Myofibrillar Myopathy	MATR3 DES	9.14e-04	8	171	2	C2678065
Disease	Autoimmune Lymphoproliferative Syndrome	CASP10 PRKCD	9.14e-04	8	171	2	C1328840
Disease	birth weight, parental genotype effect measurement	IQGAP1 IGF1R PIK3R1 RORA FKBP5 NLRP13	9.18e-04	192	171	6	EFO_0004344, EFO_0005939
Disease	Degenerative Diseases, Central Nervous System	VIM HMOX1 INA	1.50e-03	39	171	3	C0270715
Disease	Neurodegenerative Disorders	VIM HMOX1 INA	1.50e-03	39	171	3	C0524851
Disease	Degenerative Diseases, Spinal Cord	VIM HMOX1 INA	1.50e-03	39	171	3	C0751733
Disease	serum alanine aminotransferase measurement	PPP1R21 CUX2 DNAH2 CASP10 ATP8B1 RAB44 BLK PIK3R1 RECQL4 RORA MAPK10 USP48 NIN	1.73e-03	869	171	13	EFO_0004735
Disease	Combined immunodeficiency	UNC119 PIK3R1 RECQL4	1.73e-03	41	171	3	C0494261
Disease	diabetes mellitus (is_marker_for)	VIM CPB2 IGF1R	1.73e-03	41	171	3	DOID:9351 (is_marker_for)
Disease	dilated cardiomyopathy (is_implicated_in)	VEZF1 DES ANKRD1	1.99e-03	43	171	3	DOID:12930 (is_implicated_in)
Disease	sexual dimorphism measurement	EPPK1 DNAH10 ATAD5 PABPC4 RGPD1 KCNB2 TAOK2 STK10 IGF1R OR11A1 PIK3R1 SCN4A CDK5RAP1 DNA2 FKBP5	2.03e-03	1106	171	15	EFO_0021796
Disease	anxiety disorder, stress-related disorder	TUSC1 CNGB3	2.12e-03	12	171	2	EFO_0006788, EFO_0010098
Disease	Congenital myopathy (disorder)	RYR1 SCN4A	2.12e-03	12	171	2	C0270960
Disease	Paroxysmal atrial fibrillation	DNAH10 DES IGF1R MYOZ1 SYNE2	2.20e-03	156	171	5	C0235480
Disease	familial atrial fibrillation	DNAH10 DES IGF1R MYOZ1 SYNE2	2.20e-03	156	171	5	C3468561
Disease	Persistent atrial fibrillation	DNAH10 DES IGF1R MYOZ1 SYNE2	2.20e-03	156	171	5	C2585653
Disease	Atrial Fibrillation	DNAH10 DES IGF1R MYOZ1 SYNE2	2.46e-03	160	171	5	C0004238
Disease	serum albumin measurement	ZNF148 PABPC4 SLC45A4 SSU72 PIK3R1 CDK5RAP1 SMARCC1 RORA SERPINA10 PDE11A	2.48e-03	592	171	10	EFO_0004535
Disease	Anemia, Hemolytic, Acquired	SPTB HMOX1	2.50e-03	13	171	2	C0002879
Disease	Anemia, Hemolytic	SPTB HMOX1	2.50e-03	13	171	2	C0002878
Disease	Anemia, Microangiopathic	SPTB HMOX1	2.50e-03	13	171	2	C0002889
Disease	Microangiopathic hemolytic anemia	SPTB HMOX1	2.50e-03	13	171	2	C0221021
Disease	Cardiomyopathy	JPH2 DES ANKRD1	2.57e-03	47	171	3	cv:C0878544
Disease	serum gamma-glutamyl transferase measurement	SEMA4B CUX2 PCNX3 IQGAP2 NAGLU ATP8B1 ZNF804A TRMT10C IGF1R PIK3R1 CSNK2A2 RORA FKBP5	2.68e-03	914	171	13	EFO_0004532
Disease	triacylglycerol 52:1 measurement	RIPOR2 RORA	2.90e-03	14	171	2	EFO_0010413
Disease	autism spectrum disorder, schizophrenia	ZNF804A CHRNA5 OR11A1 PPP1R2P1 PRKCD RORA CACNA1I	3.07e-03	327	171	7	EFO_0003756, MONDO_0005090
Disease	Nephrosis	VIM DES	3.34e-03	15	171	2	C0027720
Disease	diffuse idiopathic skeletal hyperostosis	PIK3R1 RORA	3.34e-03	15	171	2	EFO_0007236
Disease	dual specificity mitogen-activated protein kinase kinase 2 measurement	SERPINA10 PCID2	3.80e-03	16	171	2	EFO_0008112
Disease	Malignant neoplasm of breast	VIM AMFR TRPC4 SMC6 ATP8B1 HMOX1 DES IGF1R INA SRGAP3 SYNE2 DIO3 FASTKD3 HNRNPR	4.05e-03	1074	171	14	C0006142
Disease	Intellectual Disability	CUX2 NAGLU GRIN1 SRGAP3 TPP1 RORA NKAP HNRNPR	4.70e-03	447	171	8	C3714756
Disease	protein Z-dependent protease inhibitor measurement	SERPINA10 PCID2	4.81e-03	18	171	2	EFO_0021849
Disease	Tourette syndrome, schizophrenia	DNAH10 CACNA1I	4.81e-03	18	171	2	EFO_0004895, MONDO_0005090
Disease	Malignant neoplasm of skin	CASP10 IGF1R CSNK2A2	4.90e-03	59	171	3	C0007114
Disease	Skin Neoplasms	CASP10 IGF1R CSNK2A2	4.90e-03	59	171	3	C0037286
Disease	waist-hip ratio	BICD2 CUX2 DNAH10 ADAM23 NAGLU KCNB2 KLHL32 TAOK2 IGF1R SRGAP3 CSNK2A2 SYNE2 SCN4A RORA HNRNPR	5.28e-03	1226	171	15	EFO_0004343
Disease	Congenital hernia of foramen of Morgagni	DES IGF1R	5.35e-03	19	171	2	C0265699
Disease	portal hypertension (implicated_via_orthology)	HMOX1 PIK3R1	5.35e-03	19	171	2	DOID:10762 (implicated_via_orthology)
Disease	Congenital hernia of foramen of Bochdalek	DES IGF1R	5.35e-03	19	171	2	C0265700
Disease	facial asymmetry measurement	POLE2 RORA	5.35e-03	19	171	2	EFO_0009751

Protein segments in the cluster

Peptide	Gene	Start	Entry
EKQYQNRMSLRQRKT	ATAD5	511	Q96QE3
TMRKRLEAQGYKNLH	BRD1	611	O95696
VQMLHEFSKYRQRIK	ADAM23	366	O75077
REQKNSLRKELSHYM	BICD2	251	Q8TD16
QKAALRYERAVSMHN	SH3BP5L	131	Q7L8J4
LHDAVRLNRYKMIRL	ANKRD1	256	Q15327
RNTKSEMARHLREYQ	INA	366	Q16352
EHTQMKLFRSQRNLY	BCAP29	91	Q9UHQ4
SVQFMNRLRKHLRAY	CXCL16	51	Q9H2A7
KAEMFRERYTILHQR	POLE2	126	P56282
QRRHEKMANLNNIIY	CUX2	1456	O14529
LRDVFYREMSKLNHN	BIN2	216	Q9UBW5
YSQIQEQRIMKEARR	DCAF13	401	Q9NV06
MKQTRKQYLHLRAAA	ASPM	1691	Q8IZT6
YRGFKVRKDIQNMHR	ASPM	2676	Q8IZT6
YERLHRMNPTKQETQ	ATP8B1	626	O43520
KQLYLQHRVLDQMRS	NAGLU	221	P54802
KIQSLARMHQARKRY	IQGAP1	811	P46940
QEAEMRKQREFYHKL	PCGF3	86	Q3KNV8
RDRYLARQMARVNAK	NSRP1	536	Q9H0G5
GQERYHSMTRQLLRK	RAB44	891	Q7Z6P3
LVARSIRERKMRQHY	IQCM	481	A0A1B0GVH7
AAVQRKHNLYRDSMV	NIBAN2	556	Q96TA1
RYRQQLEHIMATNRL	KIAA0895L	446	Q68EN5
RHRVYRRAQMQIDKI	KIAA1549	1561	Q9HCM3
HNERDRRIYANMFKK	FKBP5	401	Q13451
KEERKAHLTNQYMQR	PABPC4	371	Q13310
YTMRNKEVHQALRKI	OR11A1	291	Q9GZK7
YTFRNKEVKQAMRRI	OR4C15	286	Q8NGM1
KMLQKRVEHYIRTQE	HYAL2	111	Q12891
YRHNVLVKDTKRRML	JPH2	341	Q9BR39
MREKQHQRGLSASYL	LEO1	556	Q8WVC0
HRNQLRYSESMKILR	LIN37	226	Q96GY3
EKMRSARRRQQHQSY	LIN7B	186	Q9HAP6
HIMDFQRGKNLRYQL	MATR3	401	P43243
AKYAMENHSLREENR	KIF15	511	Q9NS87
NQTHAKRAYRELVLM	MAPK10	101	P53779
TMNRRGAIKQAKIHY	PRKCD	141	Q05655
RMSAFQRLVTKYQRD	DIO3	176	P55073
KKRQFEMRRTLHYNE	PPP1R2P1	136	Q96PQ5
EMRRTLHYNEGLNIK	PPP1R2P1	141	Q96PQ5
QEKKRQFEMRRRLHY	PPP1R2C	131	O14990
QHYSRKRMRLQQALA	MED31	106	Q9Y3C7
RKYNDALIISEHARM	DDX58	546	O95786
LVIMLYVFHRKRNNS	IGF1R	951	P08069
EYKIIMLNRRHLSFR	PCNX3	1711	Q9H6A9
NRDMKAAVRKIVNHY	OR4K5	291	Q8NGD3
LLTVRKNYRMVLYHN	PDE11A	651	Q9HCR9
RQLKEEMARHLREYQ	PRPH	366	P41219
RVYTNDRMHRNKRGN	CSPP1	346	Q1MSJ5
YEDHKSAAQARRRLM	HNRNPR	296	O43390
VCQQRFKRKDRMSYH	MAZ	311	P56270
NRKALTRYQMLFRHM	TUBGCP2	631	Q9BSJ2
QSNAILRYIARKHNM	GSTM3	76	P21266
HIKNYIMNKDLLRRV	PPP4R3B	561	Q5MIZ7
IQRIMHNYDKLKSRI	PIK3R1	521	P27986
ESREDLIKNHYMARI	PPP1R21	661	Q6ZMI0
LHKQNMDIYRRSRLS	RBM5	671	P52756
SEERNYSQMRIRAKQ	PNPLA7	971	Q6ZV29
QYKDQFHESRVDRRM	PPFIBP2	646	Q8ND30
YNRSIRLVQHMLKIR	PANX3	151	Q96QZ0
HRSSQKNKRMILIYL	PCID2	241	Q5JVF3
LMQDTHKQLLERGYR	PAPSS1	431	O43252
MELSHLRSRQQDKIY	PXDNL	1331	A1KZ92
QNYDNKHVRILMRRD	RGPD3	1386	A6NKT7
RLEYQIKTNQLHRMY	COMMD3	131	Q9UBI1
RYITRHIMKENDVRE	CHRNA5	401	P30532
SEEQKQLMLYYHRRQ	CFAP298	236	P57076
YHQKKEQMNEELRRE	KCNB2	141	Q92953
EALAHQRKVSYMLAR	CCDC125	416	Q86Z20
LRRNINQIKAYISMH	CPB2	296	Q96IY4
QHTMNKQYEKERQRL	CCDC18	506	Q5T9S5
KMKYNIHERNGVRFL	CEP126	561	Q9P2H0
NMLHYVKDRFLRQLD	COPA	331	P53621
RKYDEVLHMVRNAKL	COPA	606	P53621
KKNDLRYIEMQHFRE	DHX36	191	Q9H2U1
NVMKALQHERLVRLY	BLK	286	P51451
YRIRKQHRREMQESV	AXIN1	346	O15169
QREHRLMLEQRQRYL	CACNA1I	406	Q9P0X4
MARHLREYQDLLNVK	DES	381	P17661
DQRKARMHERIVKQY	CC2D1A	371	Q6P1N0
RMHERIVKQYQDAIR	CC2D1A	376	Q6P1N0
ARMHERIAKQYQDAI	CC2D1B	411	Q5T0F9
LRKYVFDRVNMHNLL	CCDC183	96	Q5T5S1
HQIVKMDLRSRYLDS	CENPN	186	Q96H22
YHLRKNDRLAVSKML	COPG2	201	Q9UBF2
LRYDHQQRLTAKEAM	CSNK2A2	306	P19784
HRKTMEVKNSQAYLR	DENND2C	361	Q68D51
RRQLDRNLTFHKMVA	CYBB	91	P04839
QGKEDMRKSQYRLHF	EFCAB8	121	A8MWE9
LRRQMKNIVHNYSEA	EPN1	6	Q9Y6I3
LQRYQFMRQKEHQEA	HS6ST2	496	Q96MM7
MQRYVKRLHEVGRTE	HMOX1	111	P09601
KRAAVYRMNRNHRGL	CASP10	271	Q92851
YHVRKNDRLAVNKMI	COPG1	201	Q9Y678
RKRVKEINQYIDHMQ	DRC3	496	Q9H069
YRLIQHARNNIMKRL	FAM186A	2161	A6NE01
KQSMSVSKEYNLRRH	GTF2IRD2	451	Q86UP8
KQSMSVSKEYNLRRH	GTF2IRD2B	451	Q6EKJ0
TIQEIRHLKEMYRLN	DNA2	186	P51530
RHLKEMYRLNLSQDE	DNA2	191	P51530
YGRKMHRQIDELVTR	DNAH10	1711	Q8IVF4
AQYSQKMLLELRRHN	DNAH2	2961	Q9P225
LDNLNKHRRYEIRMS	SDK2	1586	Q58EX2
KHRRYEIRMSVYNAV	SDK2	1591	Q58EX2
QMEKQRLLYQQARLH	RYR1	3756	P21817
DMYHSRALQVVRARK	CST3	66	P01034
RMEAVRLRKENQIYS	NKAP	361	Q8N5F7
VHMNIRLVELYRSNK	RGPD1	156	P0DJD0
MHIRYQSKLQARKAL	NUP35	211	Q8NFH5
SKDRANMQHRYIELF	HNRNPF	346	P52597
EKRSALERQRLMYEH	KIF13B	621	Q9NQT8
NVVKYKLDHMRRRIE	GTF2E1	101	P29083
MRNKYIRAEVHDAKQ	SFI1	171	A8K8P3
QMAHQKRFIERKYRQ	DROSHA	1336	Q9NRR4
SRHMKYVVRRCANRQ	TRIM34	371	Q9BYJ4
NVVLRAQMIRNEYRK	TRIM43	171	Q96BQ3
LRDNEIRSMFRKLHN	TRAPPC2L	91	Q9UL33
RHEKETEQMQRYNQR	SLK	1041	Q9H2G2
RAYRRHLLQRSMKQA	SCN4A	1736	P35499
YAMRRKIEEINNGLH	SYNE2	3686	Q8WXH0
YRQLKRHLSMQSFDE	NIN	261	Q8N4C6
RARNMKRYINQLTVA	SNX25	236	Q9H3E2
ARHDRGNYVRLNMKQ	RECQL4	346	O94761
LNMKQKHYVRGRALR	RECQL4	356	O94761
YLMEVTHDLRLRLKN	LARS1	901	Q9P2J5
QRKEYMHRRQTFIDN	IQGAP2	706	Q13576
LRKNLYRLSDFQMHR	FASTKD3	6	Q14CZ7
YALISDQKHMRKRFV	EPPK1	2041	P58107
LLYRHRNSMKVFLKQ	SEMA4B	736	Q9NPR2
DLRQNKLTYTMRGHA	SNRNP40	221	Q96DI7
MSAIYQKVRHRLNDD	STRIP1	736	Q5VSL9
DAEFQRHYLQKMRRK	SELENOO	411	Q9BVL4
RHYLQKMRRKLGLVQ	SELENOO	416	Q9BVL4
QLSGYKRMRRQHQKQ	TAOK2	491	Q9UL54
NKDVTHPRMRRYIKN	CCT3	221	P49368
NFHMEQLKYAELRAR	SMARCC1	941	Q92922
QIKTIERYMRRLEFH	RIPOR2	121	Q9Y4F9
QKREQLRAGRYIMRH	SPAG17	1561	Q6Q759
RHKNYLRVVGNMEAR	AMFR	311	Q9UKV5
QKQYLRHRRLFMDIE	CCDC15	771	Q0P6D6
ANYRRRQRALPQHMK	ANHX	186	E9PGG2
AILAMQEKKRRHLLY	CMTM1	96	Q8IZ96
EYADAQLHNLVKRMR	CNGB3	126	Q9NQW8
MRQKTRAYHRLKDDV	CDK5RAP1	476	Q96SZ6
SDLYDMQKRQRQHRH	SLC45A4	456	Q5BKX6
LRMRVRNILIHNNYK	TMPRSS11D	251	O60235
RNLHKDVMLENYRNL	ZNF624	76	Q9P2J8
QYKDLRRNLRCHMVE	ZNF441	56	Q8N8Z8
RNLRSHMLERLYQTK	ZNF136	61	P52737
HMLERLYQTKDGSQR	ZNF136	66	P52737
MIERHYFRNQLLKSF	UNC119	161	Q13432
ICNQRFKRKDRMTYH	VEZF1	206	Q14119
IRLIMQYLKENSLHR	SMU1	11	Q2TAY7
LMRYHQLQSRLATLK	SRGAP3	356	O43295
KQRDSLYAEVQKHRM	RORA	151	P35398
EMRRKLHYNEGLNIK	PPP1R2B	141	Q6NXS1
VTLSLCRMYRQQKRH	PTGIR	206	P43119
REHELLYRINAQMKA	SOGA3	866	Q5TF21
KRRNNIRHKMLSYFT	SYCP2	1371	Q9BX26
KHEKEREQMQRYNQR	STK10	776	O94804
LDRYMHRNREITRIK	USP25	401	Q9UHP3
MARHLREYQDLLNVK	VIM	376	P08670
EIMEHRFKTYQQFRR	SMC6	921	Q96SB8
ERKRKLENMYHLFQL	SPTB	1681	P11277
RGNKAEHYTAKVRQM	SMCO1	146	Q147U7
MNRLRNAKIYVERAV	TTLL3	1	Q9Y4R7
RRHIYNRDQKEMKNS	SLF1	336	Q9BQI6
KEKMLLQHRINEYQR	ROCK1	486	Q13464
AKRLMNHYINKETRG	SERPINA10	201	Q9UK55
IMLRTLHKDIARYNQ	TM9SF2	321	Q99805
ELMRRKYHSVRQEDL	ZFYVE27	121	Q5T4F4
RLKHLLRMYANKQER	ZCCHC18	191	P0CG32
QDMRLIFQNHRASYK	SP140	821	Q13342
ARRKRYISQNDMIAI	PI15	56	O43692
MRFIQKYLLQRHEKI	ZNF148	206	Q9UQR1
AYQKQVIRRSMRHRK	USP48	926	Q86UV5
EAQKRKERQEAHLYM	USP7	551	Q93009
LHRKRNNLTILQRYM	TRMT10C	26	Q7L0Y3
HQEMKLRKLEERFYQ	UBXN8	106	O00124
YTQNGILHMLDRNKR	SSU72	76	Q9NP77
RYQIMKERGKRSSEH	USP6	126	P35125
RRHHQYQEVMRNLVK	TRPC4	701	Q9UBN4
AMYRRALLQLHLEQR	TUSC1	166	Q2TAM9
VMNESERFYRKRRQH	ZNF804A	761	Q7Z570
YIQRVNTELMKAAAR	TPP1	336	O14773
LQRRVYHSMAAVQRK	KLHL32	481	Q96NJ5
HDLQARKRYMQELFK	KLHL38	206	Q2WGJ6
HRRKYRENMKAELLE	NLRP13	176	Q86W25
AVVLQKHYRMQRARQ	MYO5B	816	Q9ULV0
KHYRMQRARQAYQRV	MYO5B	821	Q9ULV0
VRRTYRQVLMEHKAT	MYO5B	851	Q9ULV0
KLRQMRVEKFIYENH	MYOZ1	61	Q9NP98
AYKRHKDARRKQMQL	GRIN1	836	Q05586
VVVVLMSRYHRRKAQ	NECTIN4	366	Q96NY8