Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionminus-end-directed microtubule motor activity

DNAH3 DNAH8 DNAH11

1.35e-04181133GO:0008569
GeneOntologyMolecularFunctionHMG box domain binding

HHEX HOXA3 HOXC4

2.88e-04231133GO:0071837
GeneOntologyMolecularFunctionDNA-binding transcription factor activity, RNA polymerase II-specific

FOXJ2 ONECUT2 HHEX TBX4 DBX2 ZNF699 ZNF404 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1 TBX10 ZNF433

3.46e-04141211319GO:0000981
GeneOntologyMolecularFunctiondynein light intermediate chain binding

DNAH3 DNAH8 DNAH11

5.21e-04281133GO:0051959
GeneOntologyMolecularFunctioncytoskeletal motor activity

DNAH3 MYO10 KIF21A DNAH8 DNAH11

5.59e-041181135GO:0003774
GeneOntologyMolecularFunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding

FOXJ2 ONECUT2 HHEX TBX4 ZNF581 ZNF699 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 TBX10 ZNF433

6.18e-04124411317GO:0000978
GeneOntologyMolecularFunctionankyrin repeat binding

KIF21A TERF1

6.54e-0471132GO:0071532
GeneOntologyMolecularFunctionmicrotubule motor activity

DNAH3 KIF21A DNAH8 DNAH11

6.69e-04701134GO:0003777
GeneOntologyMolecularFunctioncis-regulatory region sequence-specific DNA binding

FOXJ2 ONECUT2 HHEX TBX4 ZNF581 ZNF699 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 TBX10 ZNF433

7.85e-04127111317GO:0000987
GeneOntologyMolecularFunctiondynein intermediate chain binding

DNAH3 DNAH8 DNAH11

1.19e-03371133GO:0045505
GeneOntologyMolecularFunctionRNA polymerase II transcription regulatory region sequence-specific DNA binding

FOXJ2 ONECUT2 HHEX TBX4 ZNF581 ZNF699 ZNF404 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 TBX10 ZNF433

1.37e-03145911318GO:0000977
GeneOntologyBiologicalProcessembryonic skeletal system development

HOXA3 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 MMP16

9.90e-081481109GO:0048706
GeneOntologyBiologicalProcessembryonic skeletal system morphogenesis

HOXA3 HOXA11 HOXB6 HOXC4 HOXC11 HOXD10 HOXD11 MMP16

1.23e-071091108GO:0048704
GeneOntologyBiologicalProcessregionalization

HHEX HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1 CC2D2A CFAP53 DNAH11

2.57e-0747811014GO:0003002
GeneOntologyBiologicalProcesspattern specification process

HHEX HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1 CC2D2A CFAP53 DNAH11

8.08e-0752611014GO:0007389
GeneOntologyBiologicalProcessanterior/posterior pattern specification

HHEX HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

8.31e-0724711010GO:0009952
GeneOntologyBiologicalProcessproximal/distal pattern formation

HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

1.50e-06371105GO:0009954
GeneOntologyBiologicalProcessskeletal system morphogenesis

TBX4 HOXA3 HOXA11 HOXB6 HOXC4 HOXC11 HOXD10 HOXD11 MMP16

1.77e-052771109GO:0048705
GeneOntologyBiologicalProcessembryonic skeletal joint morphogenesis

HOXA11 HOXC11 HOXD11

4.06e-05131103GO:0060272
GeneOntologyBiologicalProcessanimal organ formation

HHEX HOXA3 HOXA11 HOXC11 HOXD11

6.10e-05781105GO:0048645
GeneOntologyBiologicalProcesspositive regulation of chondrocyte development

HOXA11 HOXD11

8.43e-0531102GO:1902761
GeneOntologyBiologicalProcessembryonic skeletal joint development

HOXA11 HOXC11 HOXD11

9.50e-05171103GO:0072498
GeneOntologyBiologicalProcessembryonic limb morphogenesis

TBX4 HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

1.43e-041481106GO:0030326
GeneOntologyBiologicalProcessembryonic appendage morphogenesis

TBX4 HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

1.43e-041481106GO:0035113
GeneOntologyBiologicalProcessembryonic organ development

HHEX TBX4 HOXA3 HOXA11 HOXB6 HOXC4 HOXC11 HOXD10 HOXD11 CC2D2A MMP16

2.05e-0456111011GO:0048568
GeneOntologyBiologicalProcessorgan induction

HOXA11 HOXC11 HOXD11

3.51e-04261103GO:0001759
GeneOntologyBiologicalProcessembryonic morphogenesis

HHEX TBX4 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC11 HOXD10 HOXD11 CC2D2A MMP16

4.22e-0471311012GO:0048598
GeneOntologyBiologicalProcessskeletal system development

TBX4 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 MMP16

4.47e-0461511011GO:0001501
GeneOntologyBiologicalProcessappendage morphogenesis

TBX4 HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

4.75e-041851106GO:0035107
GeneOntologyBiologicalProcesslimb morphogenesis

TBX4 HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

4.75e-041851106GO:0035108
MousePhenothoracic vertebral transformation

HOXA10 HOXA11 HOXB6 HOXC4 HOXC6

1.47e-0551865MP:0004618
MousePhenovertebral transformation

HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXD11

5.84e-05110866MP:0003036
MousePhenoincreased presacral vertebrae number

HOXA10 HOXA11 HOXD11

6.15e-0513863MP:0000464
MousePhenobiventricular, discordant atrioventricular connection

CC2D2A DNAH11

1.12e-043862MP:0011510
MousePhenosacral vertebral transformation

HOXA10 HOXA11 HOXD11

1.19e-0416863MP:0004617
DomainHomeobox_metazoa

HHEX DBX2 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1

2.44e-139011312IPR020479
DomainHomeodomain-like

ONECUT2 HHEX FMO1 DBX2 TERF1 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1 SMARCA1

1.62e-1033211316IPR009057
Domain-

ONECUT2 HHEX DBX2 TERF1 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1 SMARCA1

1.69e-10283113151.10.10.60
DomainHomeobox_CS

HHEX DBX2 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1

1.37e-0918611312IPR017970
DomainHomeobox

ONECUT2 HHEX DBX2 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1

1.70e-0923411313PF00046
DomainHOMEOBOX_1

ONECUT2 HHEX DBX2 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1

1.89e-0923611313PS00027
DomainHOX

ONECUT2 HHEX DBX2 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1

1.99e-0923711313SM00389
DomainHOMEOBOX_2

ONECUT2 HHEX DBX2 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1

2.20e-0923911313PS50071
DomainHomeobox_dom

ONECUT2 HHEX DBX2 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1

2.20e-0923911313IPR001356
DomainDUF3528

HOXA11 HOXC11 HOXD11

2.16e-0731133PF12045
DomainDUF3528

HOXA11 HOXC11 HOXD11

2.16e-0731133IPR021918
DomainHomeobox_Antennapedia_CS

HOXA3 HOXB6 HOXC4 HOXC6

7.02e-06211134IPR001827
DomainANTENNAPEDIA

HOXA3 HOXB6 HOXC4 HOXC6

1.23e-05241134PS00032
DomainDynein_heavy_chain_D4_dom

DNAH3 DNAH8 DNAH11

7.48e-05141133IPR024317
DomainDynein_HC_stalk

DNAH3 DNAH8 DNAH11

7.48e-05141133IPR024743
DomainDynein_heavy_dom-2

DNAH3 DNAH8 DNAH11

7.48e-05141133IPR013602
DomainDHC_N2

DNAH3 DNAH8 DNAH11

7.48e-05141133PF08393
DomainMT

DNAH3 DNAH8 DNAH11

7.48e-05141133PF12777
DomainAAA_8

DNAH3 DNAH8 DNAH11

7.48e-05141133PF12780
DomainATPase_dyneun-rel_AAA

DNAH3 DNAH8 DNAH11

7.48e-05141133IPR011704
DomainAAA_5

DNAH3 DNAH8 DNAH11

7.48e-05141133PF07728
DomainDHC_fam

DNAH3 DNAH8 DNAH11

9.31e-05151133IPR026983
DomainDynein_heavy_dom

DNAH3 DNAH8 DNAH11

9.31e-05151133IPR004273
DomainDynein_heavy

DNAH3 DNAH8 DNAH11

9.31e-05151133PF03028
DomainVGCC_alpha2

CACNA2D4 CACNA2D3

2.16e-0441132PF08473
DomainVDCC_a2/dsu

CACNA2D4 CACNA2D3

2.16e-0441132IPR013680
DomainVWA_N

CACNA2D4 CACNA2D3

3.59e-0451132IPR013608
DomainVWA_N

CACNA2D4 CACNA2D3

3.59e-0451132PF08399
DomainHTH_motif

HHEX DBX2 HOXA3 DBX1

8.11e-04691134IPR000047
DomainVWA_3

CACNA2D4 CACNA2D3

9.92e-0481132PF13768
DomainDHC_N1

DNAH8 DNAH11

9.92e-0481132PF08385
DomainDynein_heavy_dom-1

DNAH8 DNAH11

9.92e-0481132IPR013594
DomainHomeobox_antennapedia

HOXB6 HOXC4

2.30e-03121132IPR017995
DomainTF_T-box

TBX4 TBX10

4.65e-03171132IPR001699
DomainTBOX

TBX4 TBX10

4.65e-03171132SM00425
DomainTF_T-box_CS

TBX4 TBX10

4.65e-03171132IPR018186
Domain-

TBX4 TBX10

4.65e-031711322.60.40.820
DomainTBOX_3

TBX4 TBX10

4.65e-03171132PS50252
DomainT-box

TBX4 TBX10

4.65e-03171132PF00907
DomainTBOX_1

TBX4 TBX10

4.65e-03171132PS01283
DomainTBOX_2

TBX4 TBX10

4.65e-03171132PS01264
DomainVWA

COL6A5 CACNA2D4 CACNA2D3

4.74e-03561133PF00092
DomainP-loop_NTPase

DNAH3 MYO10 KIF21A DDX42 RNF213 NLRP1 GIMAP7 LRRIQ1 SMARCA1 DNAH8 DNAH11 TJP3

5.24e-0384811312IPR027417
Pubmed

Atlas of Hox gene expression in the developing kidney.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

5.16e-1538115915042701
Pubmed

Complete mutation analysis panel of the 39 human HOX genes.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

5.16e-1538115911857506
Pubmed

Lysine demethylase 7a regulates murine anterior-posterior development by modulating the transcription of Hox gene cluster.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

6.70e-1539115933257809
Pubmed

Quantification of Hox and surfactant protein-B transcription during murine lung development.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

8.62e-1540115919204410
Pubmed

Reduction of Hox gene expression by histone H1 depletion.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

1.76e-1443115922701719
Pubmed

Nomenclature for human homeobox genes.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

2.21e-144411591973146
Pubmed

Vertebrate homeobox gene nomenclature.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

4.21e-144711591358459
Pubmed

The human HOX gene family.

HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

4.52e-142911582574852
Pubmed

Hox patterning of the vertebrate rib cage.

HOXA10 HOXA11 HOXB6 HOXC6 HOXC11 HOXD10 HOXD11

6.79e-1417115717626057
Pubmed

New insights into the role of Jmjd3 and Utx in axial skeletal formation in mice.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

7.68e-1450115928188179
Pubmed

A dynamic expression survey identifies transcription factors relevant in mouse digestive tract development.

HHEX HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 TBX10

2.25e-131181151116971476
Pubmed

Lin28a/let-7 pathway modulates the Hox code via Polycomb regulation during axial patterning in vertebrates.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10

9.73e-1341115832479258
Pubmed

Fine mapping of human HOX gene clusters.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11

2.24e-122611578646877
Pubmed

A Hox Code Defines Spinocerebellar Neuron Subtype Regionalization.

HOXA10 HOXA11 HOXC6 HOXC11 HOXD10 HOXD11

8.93e-1216115631747609
Pubmed

Sf3b4 regulates chromatin remodeler splicing and Hox expression.

HOXA10 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

1.13e-1132115737167859
Pubmed

Hox10 and Hox11 genes are required to globally pattern the mammalian skeleton.

HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

2.01e-118115512869760
Pubmed

Targeted disruption of the mouse homologue of the Drosophila polyhomeotic gene leads to altered anteroposterior patterning and neural crest defects.

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6

1.47e-102411569367423
Pubmed

Organization and expression of mouse Hox3 cluster genes.

HOXA10 HOXB6 HOXC4 HOXC6 HOXC11

7.08e-101411558099712
Pubmed

Identification of 10 murine homeobox genes.

HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11

2.90e-093811561683707
Pubmed

Hox10 genes function in kidney development in the differentiation and integration of the cortical stroma.

HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

4.06e-0919115521858105
Pubmed

Tetrapod axial evolution and developmental constraints; Empirical underpinning by a mouse model.

HOXA10 HOXA11 HOXC11 HOXD11

7.86e-098115426238020
Pubmed

The emergent landscape of the mouse gut endoderm at single-cell resolution.

HHEX HOXA3 HOXA10 HOXB6 HOXC6 HOXD11

1.26e-0848115630959515
Pubmed

Targeted disruption of Hotair leads to homeotic transformation and gene derepression.

HOXA11 HOXC11 HOXD10 HOXD11

2.35e-0810115424075995
Pubmed

Molecular Analysis of the HOXA2-Dependent Degradation of RCHY1.

HOXA3 HOXC4 HOXC11 HOXD10

2.35e-0810115426496426
Pubmed

Deletion of a HoxD enhancer induces transcriptional heterochrony leading to transposition of the sacrum.

HOXA11 HOXD10 HOXD11

3.52e-08311539250683
Pubmed

Functional cooperation between the non-paralogous genes Hoxa-10 and Hoxd-11 in the developing forelimb and axial skeleton.

HOXA10 HOXD10 HOXD11

3.52e-08311538625796
Pubmed

Cognate homeo-box loci mapped on homologous human and mouse chromosomes.

HOXA3 HOXC4 HOXC6 HOXC11

3.68e-081111542878432
Pubmed

Recombineering-based dissection of flanking and paralogous Hox gene functions in mouse reproductive tracts.

HOXA10 HOXA11 HOXD10 HOXD11

3.68e-0811115423760953
Pubmed

A census of human transcription factors: function, expression and evolution.

FOXJ2 ONECUT2 HHEX TBX4 DBX2 TERF1 HOXA3 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11 DBX1 TBX10

5.50e-089081151619274049
Pubmed

VACTERL/caudal regression/Currarino syndrome-like malformations in mice with mutation in the proprotein convertase Pcsk5.

HOXA10 HOXA11 HOXD10 HOXD11

5.50e-0812115418519639
Pubmed

Ndrg2 regulates vertebral specification in differentiating somites.

HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

6.79e-0832115522819676
Pubmed

Hoxa11 and Hoxd11 regulate branching morphogenesis of the ureteric bud in the developing kidney.

HOXA11 HOXC11 HOXD10 HOXD11

1.11e-0714115411493536
Pubmed

The mouse Ulnaless mutation deregulates posterior HoxD gene expression and alters appendicular patterning.

HOXA11 HOXC11 HOXD10 HOXD11

1.11e-071411549342041
Pubmed

Respecification of vertebral identities by retinoic acid.

HOXA10 HOXA11 HOXD10

1.41e-07411531358593
Pubmed

A new recurrent inversion, inv(7)(p15q34), leads to transcriptional activation of HOXA10 and HOXA11 in a subset of T-cell acute lymphoblastic leukemias.

HOXA10 HOXA11 HOXC4

1.41e-074115315674412
Pubmed

The establishment of murine Hox-1 expression domains during patterning of the limb.

HOXA10 HOXA11 HOXD10

1.41e-07411538099045
Pubmed

Distal Limb Patterning Requires Modulation of cis-Regulatory Activities by HOX13.

HOXA11 HOXC11 HOXD10 HOXD11

2.00e-0716115427974206
Pubmed

Ezh2 regulates anteroposterior axis specification and proximodistal axis elongation in the developing limb.

HOXA10 HOXA11 HOXD10 HOXD11

2.00e-0716115421795281
Pubmed

Nipbl and mediator cooperatively regulate gene expression to control limb development.

HOXC4 HOXC6 HOXD10 HOXD11

2.00e-0716115425255084
Pubmed

Hox genes and the evolution of vertebrate axial morphology.

HOXC4 HOXC6 HOXD10 HOXD11

2.00e-071611547768176
Pubmed

Multiple enhancers regulate Hoxd genes and the Hotdog LncRNA during cecum budding.

HOXA10 HOXA11 HOXD10 HOXD11

2.61e-0717115424075990
Pubmed

Gli3 and Plzf cooperate in proximal limb patterning at early stages of limb development.

HOXA10 HOXA11 HOXD10 HOXD11

3.35e-0718115416015334
Pubmed

The HOX homeodomain proteins block CBP histone acetyltransferase activity.

HOXA10 HOXA11 HOXB6 HOXD10

3.35e-0718115411585930
Pubmed

Misexpression of Pknox2 in mouse limb bud mesenchyme perturbs zeugopod development and deltoid crest formation.

HOXA10 HOXA11 HOXD10 HOXD11

3.35e-0718115423717575
Pubmed

Brpf1, a subunit of the MOZ histone acetyl transferase complex, maintains expression of anterior and posterior Hox genes for proper patterning of craniofacial and caudal skeletons.

HOXA3 HOXD10 HOXD11

3.50e-075115319254709
Pubmed

Genetic analysis of a Hoxd-12 regulatory element reveals global versus local modes of controls in the HoxD complex.

HOXA11 HOXD10 HOXD11

3.50e-07511539521905
Pubmed

Hox11 expression characterizes developing zeugopod synovial joints and is coupled to postnatal articular cartilage morphogenesis into functional zones in mice.

HOXA11 HOXC11 HOXD11

3.50e-075115334010606
Pubmed

Duplication of the Hoxd11 gene causes alterations in the axial and appendicular skeleton of the mouse.

HOXA11 HOXD10 HOXD11

3.50e-075115312217321
Pubmed

Generation and expression of a Hoxa11eGFP targeted allele in mice.

HOXA11 HOXC11 HOXD11

3.50e-075115318942146
Pubmed

Plzf regulates limb and axial skeletal patterning.

HOXA11 HOXC6 HOXD10 HOXD11

4.23e-0719115410835630
Pubmed

Shox2 regulates progression through chondrogenesis in the mouse proximal limb.

HOXA10 HOXA11 HOXD10 HOXD11

4.23e-0719115423038774
Pubmed

Oct4 Is a Key Regulator of Vertebrate Trunk Length Diversity.

HOXA10 HOXB6 HOXD10 HOXD11

4.23e-0719115427453501
Pubmed

Crypto-rhombomeres of the mouse medulla oblongata, defined by molecular and morphological features.

HOXA3 HOXB6 HOXC4 HOXC6

6.50e-0721115425381007
Pubmed

Genetic analysis of a conserved sequence in the HoxD complex: regulatory redundancy or limitations of the transgenic approach?

HOXA11 HOXD10 HOXD11

6.99e-07611539733096
Pubmed

Hotair Is Dispensible for Mouse Development.

HOXC11 HOXD10 HOXD11

6.99e-076115327977683
Pubmed

Organization of human class I homeobox genes.

HOXB6 HOXC4 HOXC6 HOXD10

7.92e-072211542576652
Pubmed

Independent regulation of vertebral number and vertebral identity by microRNA-196 paralogs.

HOXA11 HOXB6 HOXC11 HOXD11

7.92e-0722115426283362
Pubmed

Pbx1/Pbx2 requirement for distal limb patterning is mediated by the hierarchical control of Hox gene spatial distribution and Shh expression.

HOXA10 HOXA11 HOXD10 HOXD11

9.57e-0723115416672333
Pubmed

Non-homeodomain regions of Hox proteins mediate activation versus repression of Six2 via a single enhancer site in vivo.

HOXA11 HOXC11 HOXD11

1.22e-067115319716816
Pubmed

Isolation of several human axonemal dynein heavy chain genes: genomic structure of the catalytic site, phylogenetic analysis and chromosomal assignment.

DNAH3 DNAH8 DNAH11

1.22e-06711539256245
Pubmed

Mesomelic dysplasias associated with the HOXD locus are caused by regulatory reallocations.

HOXA11 HOXD10 HOXD11

1.22e-067115334408147
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

IQGAP2 CES1 KIF21A UBR4 EML6 DDX42 GRIA1 RFTN1 LRPPRC RINT1 SMARCA1 CC2D2A TOP1MT DNAH8 CCDC191 MED13 SLC27A4 MYBPC1

1.23e-0614421151835575683
Pubmed

An atlas of combinatorial transcriptional regulation in mouse and man.

FOXJ2 HHEX TBX4 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 SMARCA1 ZDHHC13 ANKRD7

1.28e-068771151420211142
Pubmed

Hox11 paralogous genes are essential for metanephric kidney induction.

HOXA11 HOXC11 HOXD11

1.95e-068115312050119
Pubmed

AbdB-like Hox proteins stabilize DNA binding by the Meis1 homeodomain proteins.

HOXA10 HOXA11 HOXD11

1.95e-06811539343407
Pubmed

Hox11 genes establish synovial joint organization and phylogenetic characteristics in developing mouse zeugopod skeletal elements.

HOXA11 HOXC11 HOXD11

1.95e-068115320978074
Pubmed

A role for HOX13 proteins in the regulatory switch between TADs at the HoxD locus.

DBX2 HOXA11 HOXD10

1.95e-068115327198226
Pubmed

Reshuffling genomic landscapes to study the regulatory evolution of Hox gene clusters.

HOXC11 HOXD10 HOXD11

2.92e-069115321670281
Pubmed

"Self-regulation," a new facet of Hox genes' function.

HOXA11 HOXD10 HOXD11

2.92e-069115323913823
Pubmed

Detection of homeobox genes in development and evolution.

HOXA10 HOXC4 DBX1

2.92e-06911531720547
Pubmed

Hoxc gene collinear expression and epigenetic modifications established during embryogenesis are maintained until after birth.

HOXC4 HOXC6 HOXC11

2.92e-069115324155669
Pubmed

Identification of the murine Hox-c12 and Hox-c13 homeoboxes on yeast artificial chromosomes.

HOXC4 HOXC6 HOXC11

2.92e-06911537959778
Pubmed

HMG1 interacts with HOX proteins and enhances their DNA binding and transcriptional activation.

HOXC6 HOXD10 HOXD11

2.92e-06911538890171
Pubmed

Structural and functional differences in the long non-coding RNA hotair in mouse and human.

HOXC11 HOXD10 HOXD11

4.16e-0610115321637793
Pubmed

Genomic maps and comparative analysis of histone modifications in human and mouse.

HOXA3 HOXA10 HOXA11

7.58e-0612115315680324
Pubmed

Excessive versus physiologically relevant levels of retinoic acid in embryonic stem cell differentiation.

HOXA3 HOXA10 HOXA11

7.58e-0612115325099890
Pubmed

Orientation of the Hoxa complex and placement of the Hd locus distal to Hoxa2 on mouse chromosome 6.

HOXA3 HOXA10 HOXA11

7.58e-061211538833244
Pubmed

LncRNA-HIT Functions as an Epigenetic Regulator of Chondrogenesis through Its Recruitment of p100/CBP Complexes.

HOXA10 HOXA11 HOXD11

7.58e-0612115326633036
Pubmed

Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape.

HOXB6 HOXD10 HOXD11

7.58e-0612115327856734
Pubmed

The cell-cycle regulator geminin inhibits Hox function through direct and polycomb-mediated interactions.

HOXA10 HOXA11 HOXD10

9.83e-0613115314973489
Pubmed

The Polycomb-group homolog Bmi-1 is a regulator of murine Hox gene expression.

HOXB6 HOXC4 HOXC6

9.83e-061311538887324
Pubmed

Hox gene function in vertebrate gut morphogenesis: the case of the caecum.

HOXA10 HOXD10 HOXD11

9.83e-0613115317942481
Pubmed

HOXC6 and HOXC11 increase transcription of S100beta gene in BrdU-induced in vitro differentiation of GOTO neuroblastoma cells into Schwannian cells.

HOXC6 HOXC11

1.08e-052115217488478
Pubmed

The role of HOX genes in human implantation.

HOXA10 HOXA11

1.08e-052115215731295
Pubmed

Homeobox genes: potential candidates for the transcriptional control of the transformed and invasive phenotype.

HOXA10 HOXB6

1.08e-05211527906121
Pubmed

[Effect of human cytomegalovirus infection on the expression of hoxc4 and hoxc6 genes in the proliferation of lymphocytic progenitor cells].

HOXC4 HOXC6

1.08e-052115219236766
Pubmed

Expression of HOXA-10 and HOXA-11 in the endometria of women with idiopathic infertility.

HOXA10 HOXA11

1.08e-052115221526497
Pubmed

Laparoscopic Ovarian Drilling Improves Endometrial Homeobox Gene Expression in PCOS.

HOXA10 HOXA11

1.08e-052115232046414
Pubmed

Absence of mutations in the HOXA11 and HOXD11 genes in children with congenital renal malformations.

HOXA11 HOXD11

1.08e-052115219255789
Pubmed

The role of abnormal hypermethylation of the HOXA10 and HOXA11 promoters in implantation failures in IVF programs.

HOXA10 HOXA11

1.08e-052115231532317
Pubmed

Laparoscopic endometrioma resection increases peri-implantation endometrial HOXA-10 and HOXA-11 mRNA expression.

HOXA10 HOXA11

1.08e-052115226056923
Pubmed

Comprehensive microarray analysis of Hoxa11/Hoxd11 mutant kidney development.

HOXA11 HOXD11

1.08e-052115216581055
Pubmed

Endometrial Injury Upregulates Expression of Receptivity Genes in Women with Implantation Failure.

HOXA10 HOXA11

1.08e-052115236900953
Pubmed

Translation inhibitory elements from Hoxa3 and Hoxa11 mRNAs use uORFs for translation inhibition.

HOXA3 HOXA11

1.08e-052115234076576
Pubmed

HOXA-11 mediated dysregulation of matrix remodeling during implantation window in women with endometriosis.

HOXA10 HOXA11

1.08e-052115223979130
Pubmed

Functional equivalence and rescue among group 11 Hox gene products in vertebral patterning.

HOXA11 HOXD11

1.08e-05211528660870
Pubmed

Hoxa10 and Hoxd10 coordinately regulate lumbar motor neuron patterning.

HOXA10 HOXD10

1.08e-052115212918017
Pubmed

The Role of Hox Genes in Female Reproductive Tract Development, Adult Function, and Fertility.

HOXA10 HOXA11

1.08e-052115226552702
Pubmed

HoxA10 and HoxA11 Regulate the Expression of Contraction-Associated Proteins and Contribute to Regionalized Myometrium Phenotypes in Women.

HOXA10 HOXA11

1.08e-052115228372536
Pubmed

Absence of radius and ulna in mice lacking hoxa-11 and hoxd-11.

HOXA11 HOXD11

1.08e-05211527596412
InteractionALX4 interactions

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4

7.48e-06481145int:ALX4
CytobandEnsembl 112 genes in cytogenetic band chr7p15

HOXA3 HOXA10 HOXA11 DNAH11

1.26e-041011154chr7p15
Cytoband7p15.2

HOXA3 HOXA10 HOXA11

1.76e-044311537p15.2
Cytoband12q13.3

HOXC4 HOXC6 HOXC11

2.92e-0451115312q13.3
GeneFamilyHOXL subclass homeoboxes

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXC11 HOXD10 HOXD11

3.12e-1252889518
GeneFamilyDyneins, axonemal

DNAH3 DNAH8 DNAH11

7.21e-0517883536
GeneFamilyFibronectin type III domain containing|I-set domain containing|Myosin binding proteins

MYOM3 MYBPC1

6.43e-048882658
CoexpressionDESCARTES_ORGANOGENESIS_LIMB_MESENCHYME

TBX4 HOXA10 HOXA11 HOXD10 HOXD11

3.07e-07331145MM3669
CoexpressionMIKKELSEN_IPS_WITH_HCP_H3K27ME3

TBX4 HOXA3 HOXA11 HOXB6 HOXC6 HOXD10 DBX1

3.43e-071031147M1967
CoexpressionMIKKELSEN_IPS_WITH_HCP_H3K27ME3

TBX4 HOXA3 HOXA11 HOXB6 HOXC6 HOXD10 DBX1

4.18e-071061147MM1265
CoexpressionMEISSNER_NPC_HCP_WITH_H3K27ME3

HOXA10 HOXA11 HOXB6 HOXC11 HOXD10 SCNN1G

1.27e-06791146M1932
CoexpressionMEISSNER_NPC_HCP_WITH_H3K27ME3

HOXA10 HOXA11 HOXB6 HOXC11 HOXD10 SCNN1G

1.37e-06801146MM817
CoexpressionDESCARTES_FETAL_STOMACH_CILIATED_EPITHELIAL_CELLS

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CCDC191 CFAP53 PPP1R42 DNAH11

1.05e-053171149M40298
CoexpressionNIKOLSKY_BREAST_CANCER_7P15_AMPLICON

HOXA3 HOXA10 HOXA11

1.29e-05111143M18241
CoexpressionMEISSNER_BRAIN_HCP_WITH_H3K27ME3

HOXA10 HOXA11 HOXB6 HOXC4 HOXC11 HOXD10 HOXD11 DBX1

2.58e-052721148M1938
CoexpressionGSE23114_PERITONEAL_CAVITY_B1A_BCELL_VS_SPLEEN_BCELL_IN_SLE2C1_MOUSE_UP

HHEX SEC31B ADD3 PHYH LTB4R RNF139 MMP16

2.71e-051991147M8294
CoexpressionMEISSNER_BRAIN_HCP_WITH_H3K27ME3

HOXA10 HOXA11 HOXB6 HOXC4 HOXC11 HOXD10 HOXD11 DBX1

3.34e-052821148MM822
CoexpressionAtlasgudmap_RNAseq_e11.5_Ureteric_stalks_2500_K2

RNF213 HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 SH2D4A HOXC11 HOXD10 HOXD11 SCNN1G TJP3

8.03e-0744111513gudmap_RNAseq_e11.5_Ureteric_stalks_2500_K2
CoexpressionAtlasgudmap_RNAseq_p2_CD2APMEISWT_2500_K2

HOXA3 HOXA10 HOXA11 HOXB6 HOXC4 HOXC11 HOXD10

1.12e-06991157gudmap_RNAseq_p2_CD2APMEISWT_2500_K2
CoexpressionAtlaskidney_P0_CapMes_Crym_top-relative-expression-ranked_500

HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11 MMP16 ZDHHC13

3.23e-052941159gudmap_kidney_P0_CapMes_Crym_500
CoexpressionAtlaskidney_P1_CapMes_Crym_top-relative-expression-ranked_200

HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11

4.89e-051201156gudmap_kidney_P1_CapMes_Crym_200
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_500

HOXA10 HOXA11 HOXC4 HOXD10 HOXD11 ZDHHC13

5.62e-051231156gudmap_kidney_P3_CapMes_Crym_k3_500
CoexpressionAtlaskidney_P0_CapMes_Crym_top-relative-expression-ranked_200

HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11

5.88e-051241156gudmap_kidney_P0_CapMes_Crym_200
CoexpressionAtlaskidney_P1_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_100

HOXA11 HOXC4 HOXD10 HOXD11

8.56e-05431154gudmap_kidney_P1_CapMes_Crym_k4_100
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_1000

FMO1 TBX4 CES1 TCEAL2 GRIA1 FAM3B CFAP43 HOXA10 HOXA11 HOXC4 HOXC6 HOXD10 HOXD11 DBX1 PPP1R42 TJP3

8.86e-0599211516PCBC_EB_blastocyst_1000
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_top-relative-expression-ranked_1000

ONECUT2 FMO1 TBX4 TCEAL2 GRIA1 FAM3B CFAP43 HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11 MYBPC1 TJP3

9.07e-0599411516PCBC_EB_1000
CoexpressionAtlaskidney_P0_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_500

HOXA10 HOXA11 HOXB6 HOXC4 HOXD10 HOXD11 ZDHHC13

9.09e-051941157gudmap_kidney_P0_CapMes_Crym_k2_500
CoexpressionAtlaskidney_P2_CapMes_Crym_top-relative-expression-ranked_200

HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11

1.11e-041391156gudmap_kidney_P2_CapMes_Crym_200
CoexpressionAtlasdev lower uro neuro_e14.5_BladdPelvicGanglion_Sox10_k-means-cluster#3_top-relative-expression-ranked_1000

KIF21A RGS7 CHRNA5 HOXD10 HOXD11 MMP16 UNC13A

1.17e-042021157gudmap_dev lower uro neuro_e14.5_BladdPelvicGanglion_Sox10_k3_1000
CoexpressionAtlaskidney_P2_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_500

HOXA10 HOXA11 HOXB6 HOXC4 HOXD10 HOXD11 ZDHHC13

1.17e-042021157gudmap_kidney_P2_CapMes_Crym_k3_500
CoexpressionAtlaskidney_P1_CapMes_Crym_top-relative-expression-ranked_500

HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11 MMP16 ZDHHC13

1.31e-042761158gudmap_kidney_P1_CapMes_Crym_500
CoexpressionAtlaskidney_P0_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_200

HOXA11 HOXB6 HOXD10 HOXD11

1.43e-04491154gudmap_kidney_P0_CapMes_Crym_k2_200
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_k-means-cluster#4_top-relative-expression-ranked_500

HOXA10 HOXA11 HOXD10 HOXD11 ZDHHC13

1.68e-04951155gudmap_kidney_P4_CapMesRenVes_Crym_k4_500
CoexpressionAtlaskidney_P2_CapMes_Crym_top-relative-expression-ranked_500

HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11 ZDHHC13

1.88e-042911158gudmap_kidney_P2_CapMes_Crym_500
CoexpressionAtlaskidney_P2_CapMes_Crym_k-means-cluster#3_top-relative-expression-ranked_200

HOXA11 HOXB6 HOXC4 HOXD10 HOXD11

1.94e-04981155gudmap_kidney_P2_CapMes_Crym_k3_200
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_100

HOXA3 HOXA10 HOXB6 HOXC4 HOXC6

2.13e-041001155PCBC_ratio_EB_vs_SC_100
CoexpressionAtlasdev gonad_e13.5_F_SupCellPrec_Sry_k-means-cluster#2_top-relative-expression-ranked_200

RNF213 SH2D4A SMARCA1

2.53e-04231153gudmap_dev gonad_e13.5_F_SupCellPrec_Sry_k2_200
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_from_inducedPluripotentialStemCells_derived from_from_fibroblast_top-relative-expression-ranked_1000

ONECUT2 FMO1 TBX4 GRIA1 FAM3B HOXA10 HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11 UGT2B11 MYBPC1 TJP3

2.82e-0498611515PCBC_EB_fibroblast_1000
CoexpressionAtlasdev gonad_e13.5_M_SertoliCell_Sox9_k-means-cluster#4_top-relative-expression-ranked_200

RNF213 SH2D4A SMARCA1

2.88e-04241153gudmap_dev gonad_e13.5_M_SertoliCell_Sox9_k4_200
CoexpressionAtlaskidney_P3_CapMes_Crym_top-relative-expression-ranked_200

HOXA11 HOXB6 HOXC4 HOXC6 HOXD10 HOXD11

2.91e-041661156gudmap_kidney_P3_CapMes_Crym_200
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#1_top-relative-expression-ranked_1000

HOXA3 HOXA10 HOXA11 HOXC4 HOXD10 HOXD11 ZDHHC13

3.04e-042361157gudmap_kidney_P3_CapMes_Crym_k1_1000
CoexpressionAtlaskidney_e15.5_Podocyte_MafB_k-means-cluster#3_top-relative-expression-ranked_500

HOXA11 HOXB6 HOXD10 HOXD11 SMARCA1

3.05e-041081155gudmap_kidney_e15.5_Podocyte_MafB_k3_500
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ bladder_emap-30872_k-means-cluster#5_top-relative-expression-ranked_1000

IQGAP2 MYO10 BAZ1B PREPL ADD3 SNX27 ULBP1 MMP16 MED13

3.13e-043971159gudmap_developingLowerUrinaryTract_e14.5_ bladder_1000_k5
CoexpressionAtlaskidney_P4_CapMesRenVes_Crym_k-means-cluster#3_top-relative-expression-ranked_100

HOXA11 HOXD10 HOXD11

3.26e-04251153gudmap_kidney_P4_CapMesRenVes_Crym_k3_100
CoexpressionAtlaskidney_P1_CapMes_Crym_top-relative-expression-ranked_100

HOXA11 HOXC4 HOXD10 HOXD11

3.57e-04621154gudmap_kidney_P1_CapMes_Crym_100
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_top-relative-expression-ranked_500

FMO1 TBX4 GRIA1 CFAP43 HOXA10 HOXA11 HOXC4 HOXC6 HOXD10 MYBPC1

3.69e-0449611510PCBC_EB_500
CoexpressionAtlasProgenitor-Cell-Biology-Consortium_EmbryoidBody_fromBlastocyst-derived-humanEmbryonicStemCells_top-relative-expression-ranked_500

FMO1 TBX4 FAM3B CFAP43 HOXA10 HOXA11 HOXC4 HOXC6 HOXD10 DBX1

3.69e-0449611510PCBC_EB_blastocyst_500
CoexpressionAtlasJC_fibro_top-relative-expression-ranked_500_k-means-cluster#1

GRIA1 HOXA10 HOXA11 HOXC11 HOXD10 HOXD11

3.74e-041741156JC_fibro_500_K1
CoexpressionAtlaskidney_adult_Podocyte_MafB_k-means-cluster#4_top-relative-expression-ranked_100

B3GALT2 IQGAP2 SH2D4A TOP1MT

4.04e-04641154gudmap_kidney_adult_Podocyte_MafB_k4_100
CoexpressionAtlasJC_fibro_top-relative-expression-ranked_2500_k-means-cluster#5

FMO1 TBX4 GRIA1 ZNF404 EPG5 HOXA10 HOXA11 HOXC4 HOXC6 SH2D4A HOXC11 HOXD10 HOXD11

4.67e-0481411513JC_fibro_2500_K5
CoexpressionAtlaskidney_e15.5_Podocyte_MafB_top-relative-expression-ranked_1000

FMO1 IQGAP2 KIF21A DERA HOXA10 HOXA11 HOXB6 SH2D4A HOXD10 HOXD11 SMARCA1 RNF139 STEAP1

4.67e-0481411513gudmap_kidney_e15.5_Podocyte_MafB_1000
CoexpressionAtlaskidney_P1_CapMes_Crym_k-means-cluster#4_top-relative-expression-ranked_500

HOXA11 HOXB6 HOXC4 HOXD10 HOXD11 ZDHHC13

7.00e-041961156gudmap_kidney_P1_CapMes_Crym_k4_500
CoexpressionAtlasBM Top 100 - kidney medulla

HOXC6 HOXD10 SCNN1G VAV3

7.01e-04741154BM Top 100 - kidney medulla
CoexpressionAtlasDevelopingLowerUrinaryTract_e15.5_Urothelium_emap-28091_k-means-cluster#3_top-relative-expression-ranked_1000

CCDC141 HOXB6 SH2D4A SCNN1G STEAP1 MYBPC1

7.19e-041971156gudmap_developingLowerUrinaryTract_e15.5_Urothelium_1000_k3
CoexpressionAtlaskidney_P3_CapMes_Crym_k-means-cluster#2_top-relative-expression-ranked_100

HOXA11 HOXD10 HOXD11

7.50e-04331153gudmap_kidney_P3_CapMes_Crym_k2_100
CoexpressionAtlasAravindRamakr_EmbryoidBody-LF_top-relative-expression-ranked_1000_k-means-cluster#2

TBX4 TCEAL2 GRIA1 HOXA11 SH2D4A HOXD10

7.99e-042011156Arv_EB-LF_1000_K2
CoexpressionAtlasratio_EmbryoidBody_vs_StemCell_top-relative-expression-ranked_2500_k-means-cluster#3

ONECUT2 FMO1 TBX4 GRIA1 NLRP1 CFAP43 HOXA3 HOXA11 HOXB6 HOXC4 HOXC6 LRRIQ1 HOXD10 HOXD11 PPP1R42

8.30e-04109411515ratio_EB_vs_SC_2500_K3
CoexpressionAtlaskidney_e13.5_Podocyte_MafB_top-relative-expression-ranked_1000

RPF1 HHEX DNAH3 RNF213 CFAP43 CCDC141 HOXA10 HOXA11 HOXD10 HOXD11 UNC13A

8.74e-0465611511gudmap_kidney_e13.5_Podocyte_MafB_1000
ToppCellASK440-Epithelial-Ciliated|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CCDC191 CFAP53 PPP1R42 DNAH11

2.03e-091941159c84a7fa94fb06e08aae04db56c8c313b0afde1d7
ToppCellASK452-Epithelial-Ciliated|ASK452 / Donor, Lineage and Cell class of Lung cells from Dropseq

DNAH3 KIF21A ECT2L CFAP43 LRRIQ1 CC2D2A CCDC191 CFAP53 DNAH11

2.03e-0919411595aeb44657ab6f61b1abf98af28d3397d8e44c1aa
ToppCellNS-critical-LOC-Epithelial-Ciliated|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 CES1 KIF21A CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

2.12e-09195115934e37cff4849696ca4ba5dd8fd2cf98fed8bc912
ToppCellmoderate-Epithelial-Ciliated|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DNAH3 CES1 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

2.12e-0919511593486eae5fdb062a75a907b896c9d7b396d2aa195
ToppCellmoderate-Epithelial-Ciliated|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DNAH3 CES1 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

2.12e-091951159e80f5cdf0b18066b3e6c2f5452e58f101c67932c
ToppCellBL-critical-LOC-Epithelial-Ciliated|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 CES1 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

2.12e-09195115907a6bcef6af93ed87df455dee624037cb75e011a
ToppCellPSB-critical-LOC-Epithelial-Ciliated|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CCDC191 CFAP53 PPP1R42 DNAH11

2.32e-0919711596865f4831eb23794fb88a8649d48d497bbae3f44
ToppCellBiopsy_IPF-Epithelial-Ciliated|Biopsy_IPF / Sample group, Lineage and Cell type

DNAH3 KIF21A ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

2.65e-092001159bb8c99156e547a8eb6599b6b6bc3c66bf77af7f8
ToppCellNS-critical-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

2.98e-08186115876033438426d8f9c72cd6691a7baf92104c9f03d
ToppCellNasal_Brush-Epithelial-Ciliated_2|Nasal_Brush / Tissue, Lineage and Cell class of Lung Cells from 10X

DNAH3 CES1 CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

3.51e-0819011589ce7df056bfb24d70db4c3c4a2c57d89115de877
ToppCellNasal_Brush-Epithelial-Ciliated_2|Epithelial / Tissue, Lineage and Cell class of Lung Cells from 10X

DNAH3 CES1 CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

3.51e-081901158833481ace2800354712e2ce709d5cdfd0aed3d42
ToppCellASK428-Epithelial-Ciliated|ASK428 / Donor, Lineage and Cell class of Lung cells from Dropseq

DNAH3 ECT2L CFAP43 LRRIQ1 CCDC191 CFAP53 PPP1R42 DNAH11

3.65e-0819111580c4b926a28bc94f3cf4d68a911c0a189f6ff505e
ToppCellASK452-Epithelial-Ciliated|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

KIF21A ECT2L CFAP43 LRRIQ1 CC2D2A CCDC191 CFAP53 DNAH11

3.96e-081931158c0d10075862ac878aa05fc49c8b73e470783bf16
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.3|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

3.96e-081931158e1b76102f812c433195d1e8811fdd3293a7bc22e
ToppCellBronchial_Biopsy-Epithelial-Ciliated_1|Epithelial / Tissue, Lineage and Cell class of Lung Cells from 10X

DNAH3 CES1 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

3.96e-0819311580b62a6ddd7c42efd9f39781971d1438501e1fa8d
ToppCellwk_20-22-Epithelial-Proximal_epithelial-MUC16+_ciliated|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

DNAH3 KIF21A ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

4.12e-081941158756082a0f5953b52229bb60d40b84701cb6cb23d
ToppCellBronchial_Brush-Epithelial-Ciliated_1|Bronchial_Brush / Tissue, Lineage and Cell class of Lung Cells from 10X

CES1 CFAP43 LRRIQ1 CC2D2A CCDC191 CFAP53 PPP1R42 DNAH11

4.12e-081941158b4ce60c06568123008b1081d644733cb91c28f51
ToppCellNS-critical-d_07-13-Epithelial-Ciliated|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

4.12e-0819411581ae8a10e508e672e6677f0e3c986ac30d05adeb3
ToppCellBronchial_Brush-Epithelial-Ciliated_1|Epithelial / Tissue, Lineage and Cell class of Lung Cells from 10X

CES1 CFAP43 LRRIQ1 CC2D2A CCDC191 CFAP53 PPP1R42 DNAH11

4.12e-0819411587a7ddccfe72a4a0dc4d1a5c809988f0069f9f1a3
ToppCellCOVID-19-Epithelial-Ciliated_cells|Epithelial / Condition, Lineage and Cell class

DNAH3 CES1 KIF21A ECT2L CFAP43 LRRIQ1 CFAP53 DNAH11

4.46e-081961158de7aa31354b019d7321a8ef965d59ce2e8b89276
ToppCellcritical-Epithelial-Ciliated|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

4.46e-08196115827b855c6e1ae44f16db998cf0e81bd686b9cee7e
ToppCellNS-control-d_0-4-Epithelial-Ciliated|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

4.46e-081961158d46ab80554dd3c1cc81e1938ea2acfd5e85c6d2a
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 CES1 KIF21A ECT2L CFAP43 LRRIQ1 CC2D2A DNAH11

4.64e-08197115891637bdeab85024b5a02d1066f76cb803a2d6420
ToppCellwk_20-22-Epithelial-Proximal_epithelial|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

DNAH3 KIF21A CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11 TJP3

4.83e-08198115816c54b884500066ade05a406915f9569ca8abdfc
ToppCellcritical-Epithelial-Ciliated|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

4.83e-081981158ee2c8385c0bf4ea9f5c9517b52cf131af3fbdd40
ToppCellwk_20-22-Epithelial-Proximal_epithelial-Ciliated|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

DNAH3 KIF21A CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11 TJP3

5.02e-081991158b974b495cabbcc3934936cec846c0e2442a70ac3
ToppCellmedial-Epithelial-Ciliated-2|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11 TJP3

5.02e-081991158526002f16bbf61cf086278d45a401cc0b0b757a8
ToppCellmedial-Epithelial-Ciliated|medial / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11 TJP3

5.02e-081991158a2daa42b100c422dc8c04fb7d2ebf54293eef574
ToppCellmedial-2-Epithelial-Ciliated|2 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11 TJP3

5.02e-081991158c02f04a5aa79ee0cf427f6e94b93ceab38ebbcd7
ToppCellBronchus_Control_(B.)-Epithelial-TX-Ciliated|Bronchus_Control_(B.) / Sample group, Lineage and Cell type

DNAH3 ECT2L CFAP43 LRRIQ1 CCDC191 CFAP53 PPP1R42 DNAH11

5.22e-0820011586a2ccc71a0cbe04a542c379b28b5006de53981c3
ToppCell3'-Distal_airway-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 ECT2L CFAP43 LRRIQ1 CCDC191 CFAP53 DNAH11

3.40e-071731157c3762655caa79ac4879876f470d32578a3c93b01
ToppCellAdult-Epithelial-ciliated_cell-D122|Adult / Lineage, Cell type, age group and donor

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

4.79e-0718211577ded554a4b441e6496db673ba206c0d76ccad7d9
ToppCellControl-Epithelial_cells-Airway_ciliated|Control / group, cell type (main and fine annotations)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

4.79e-071821157fb725d10d9ed25dfc6d5bb69cfef78513f7d3e8f
ToppCell367C-Epithelial_cells-Epithelial-F_(Ciliated)-|367C / Donor, Lineage, Cell class and subclass (all cells)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

4.97e-071831157b1336eac5adbffade4cef3e0ce3de75a781ae365
ToppCell367C-Epithelial_cells-Epithelial-F_(Ciliated)|367C / Donor, Lineage, Cell class and subclass (all cells)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

4.97e-071831157cc57dcb59c68d68a546dc108dd9e009b2aab8da5
ToppCellNS-moderate-d_16-33-Epithelial-Ciliated|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A PPP1R42 DNAH11

5.34e-0718511575e689c2fb36ce3ac2adc8d15f67107f21cf68868
ToppCell15-Airway-Epithelial-Multiciliated_cell|Airway / Age, Tissue, Lineage and Cell class

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.34e-0718511570998b6bf44287eebbf39249fff23fc3689e44c4e
ToppCellAdult-Epithelial-ciliated_cell-D175|Adult / Lineage, Cell type, age group and donor

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.34e-07185115730f4980dee6cd5959655f8d74049f3bfb5312611
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.34e-0718511573e39a3cb534dfe2301930f3e2f7e8cefb522c158
ToppCellCOVID-19-Epithelial_cells-Airway_ciliated|COVID-19 / group, cell type (main and fine annotations)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.34e-07185115718a40f0a338aa398d81384b5159fb80ce8a2020c
ToppCellCiliated_cells-B-IPF_01|World / lung cells shred on cell class, cell subclass, sample id

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.54e-071861157f72267d533fd0c5280d9741ceee3dd116300a7e4
ToppCellNS-moderate-d_07-13-Epithelial-Ciliated|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A PPP1R42 DNAH11

5.54e-07186115785787ff207f109ec7e3c0f729ba9bda739c2fdc9
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.75e-0718711579e10ed56090d82589bc457788282f664b70ace4b
ToppCell21-Trachea-Epithelial-Intermediate_ciliated|Trachea / Age, Tissue, Lineage and Cell class

CES1 CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

5.75e-0718711571a2178a195d078d1963947b327c6d0d4f2f48341
ToppCellEpithelial-ciliated_cell|World / Lineage, Cell type, age group and donor

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.95e-07188115761a459f3fe57e5728efc72637ff2edc2d343492b
ToppCellAdult-Epithelial-ciliated_cell-D231|Adult / Lineage, Cell type, age group and donor

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

5.95e-07188115734b11f72ca73153d02edcd09b38983ad1a504659
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Immune-Lymphocytic_T/NK-T_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

IQGAP2 NLRP1 GIMAP7 CCDC141 RFTN1 CEACAM21 ZC3H12D

6.17e-071891157b87d586a9570fa54f3e0c6bd4731c5badcaedae6
ToppCellCOVID-19-lung-Ciliated|COVID-19 / Disease (COVID-19 only), tissue and cell type

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.17e-071891157a2da5debd10f27b1280b40141ef0bfef007cc72c
ToppCellTransplant_Alveoli_and_parenchyma-Epithelial-Ciliated_1|Transplant_Alveoli_and_parenchyma / Tissue, Lineage and Cell class of Lung Cells from 10X

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.17e-071891157dc440015949a768188c67661b6be63b1ead1a0f0
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Immune-Lymphocytic_T/NK|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

IQGAP2 NLRP1 GIMAP7 CCDC141 RFTN1 CEACAM21 ZC3H12D

6.17e-071891157823d6debd09e440ddf36c54af24a5f20e222a21e
ToppCellrenal_papilla_nuclei-Hypertensive_with+without-CKD-Immune-Lymphocytic_T/NK-T_Cell-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

IQGAP2 NLRP1 GIMAP7 CCDC141 RFTN1 CEACAM21 ZC3H12D

6.17e-07189115747c2b419b081d5bf75da5e3d9a0e05a70362dfe7
ToppCellAdult-Epithelial-ciliated_cell|Adult / Lineage, Cell type, age group and donor

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.17e-071891157b679920f0993e917dd86da082113bfbd85ea1ca5
ToppCellCOVID-19-lung-Ciliated|lung / Disease (COVID-19 only), tissue and cell type

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.17e-07189115727329c4661aebabd19fac7fe5dca263fe99d76f3
ToppCellCiliated_cells-B|World / lung cells shred on cell class, cell subclass, sample id

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.39e-0719011577031fbedc13be1a00f6333ad6d51849c3739c2e6
ToppCellEpithelial_cells-Ciliated_cells-B|Epithelial_cells / lung cells shred on cell class, cell subclass, sample id

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.39e-071901157426a4806f6e39d4d57c6746609d30bb3ca62df7d
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.62e-0719111572a8e6d560907e71e9f6e190ca0667da804e25641
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated-|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.62e-07191115746c9d4d10c66c0fae1fa351924091b69ea2f38d4
ToppCellMild_COVID-19-Epithelial-Ciliated|Mild_COVID-19 / Disease group,lineage and cell class (2021.01.30)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.62e-071911157995e76bbf07674d95b8ef09e078cf6410af27a09
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.62e-071911157a37f20172b85566b9039254a89680e37fd503fd5
ToppCellBAL-Mild-Epithelial-Epithelial-Ciliated|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.62e-0719111572d36e08c5629cf73b6dd02cd173cafb52e8a3a7d
ToppCellwk_15-18-Epithelial-Proximal_epithelial-MUC16+_ciliated|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.62e-071911157e81cd65dbf0ef1c2ab7088f73ce605d456dd3a7a
ToppCellBronchial_Biopsy-Epithelial-Ciliated_1|Bronchial_Biopsy / Tissue, Lineage and Cell class of Lung Cells from 10X

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

6.86e-071921157be592e661367affced9ebe80849b466e6adb3a34
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 ECT2L CFAP43 LRRIQ1 CCDC191 PPP1R42 DNAH11

6.86e-0719211571b6cac8156e608061e1405e36e18d185b6fa8f6f
ToppCellASK428-Epithelial-Ciliated|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

ECT2L CFAP43 LRRIQ1 CCDC191 CFAP53 PPP1R42 DNAH11

6.86e-071921157356ebddd03aec341b79890977edb8ff0804999a1
ToppCell15-Trachea-Epithelial-Multiciliated_cell|Trachea / Age, Tissue, Lineage and Cell class

CES1 CFAP43 LRRIQ1 CC2D2A CFAP53 PPP1R42 DNAH11

7.10e-071931157aa3acc7571405169efb656d214f3a8cbf988362e
ToppCellIPF-Epithelial-Ciliated|Epithelial / Disease state, Lineage and Cell class

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

7.10e-071931157ad58f5080e0ba65c845056ea6b79037b636e9c64
ToppCellASK440-Epithelial-Ciliated|ASK440 / Donor, Lineage and Cell class of Lung cells from Dropseq

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

7.10e-071931157a0baa8be6f590b2031fede22be588715ae458e93
ToppCellwk_15-18-Epithelial-Proximal_epithelial|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

DNAH3 KIF21A CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

7.35e-071941157b0477583301dc6d9767b667bd2f8f94fbfaa6f81
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

7.61e-0719511570e763f36786515698b593e5c93f6a56619c1242d
ToppCellwk_15-18-Epithelial-Proximal_epithelial-Ciliated|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

7.61e-071951157cfcf554b436083179dea1d6fd6e3a800ea2430fe
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

7.61e-071951157581b04220587e1d5198b1abd6965965ace7803e7
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

7.61e-07195115793b1559382a12cfb158aa5fac7386e38b4f87989
ToppCell3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ECT2L CFAP43 LRRIQ1 CCDC191 CFAP53 PPP1R42 DNAH11

7.61e-0719511579651ee03738226ee10e901f8b9ec6a417eb9c301
ToppCell3'-GW_trimst-1-LargeIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_1_(HAND1+)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CHRNA5 HOXA10 HOXA11 HOXD10 HOXD11 UGT2B11 RPL15

7.88e-071961157fd0a2b863dedaf08d18e7f67da18ac7e853991e4
ToppCell3'-GW_trimst-2-LargeIntestine-Mesenchymal-fibroblastic-Stromal_1_(ADAMDEC1+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CES1 HOXA10 HOXA11 VSTM4 HOXD10 HOXD11 RPL15

7.88e-071961157a7adc0e0baef261d0937e4e8351321d41beca82f
ToppCellNS-moderate-d_0-4-Epithelial-Ciliated|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DNAH3 CES1 CFAP43 LRRIQ1 CC2D2A CFAP53 DNAH11

8.15e-07197115771fea4aa6ce96c7693fa94792d08770622873850
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 CES1 KIF21A ECT2L CFAP43 LRRIQ1 DNAH11

8.15e-07197115722c87dd15dc57bd0aa98a204c9fc9b3b9b573b45
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 CES1 KIF21A ECT2L CFAP43 LRRIQ1 DNAH11

8.15e-0719711573bbf068d2ad8196fbc85d3f311a7c54c9aece856
ToppCellcontrol-Epithelial-Ciliated|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 DNAH11

8.15e-071971157e453d085182364ca347cbcc9dc995c62c3353016
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

DNAH3 CES1 KIF21A ECT2L CFAP43 LRRIQ1 DNAH11

8.15e-07197115787db09f341e2b20eb6e1c3e917cb5c960387b3e9
ToppCellwk_20-22-Epithelial|wk_20-22 / Celltypes from embryonic and fetal-stage human lung

DNAH3 KIF21A CFAP43 LRRIQ1 CFAP53 DNAH11 TJP3

8.15e-071971157468071c1911cdf8e8806a78dbceb95379e28ae91
ToppCellcontrol-Epithelial-Ciliated|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DNAH3 ECT2L CFAP43 LRRIQ1 CC2D2A CFAP53 DNAH11

8.15e-071971157d4e963c1f82996371bf3d63578ee9fce8e00c5a8
ToppCelldistal-Epithelial-Ciliated-2|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

8.72e-0719911572de1fe124737a6cca4b3805ab3056f9d9d7c16c7
ToppCellproximal-Epithelial-Ciliated|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

8.72e-0719911579700f06e51ddca85e482b4f9bd4a79bfcd3cfb76
ToppCellproximal-3-Epithelial-Ciliated|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

8.72e-0719911571188afad6fd5f01f9aeba225f611f38b237dd2c9
ToppCellproximal-Epithelial-Ciliated-3|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

8.72e-0719911572e8ace105c4e2405baa06d953e52888b54e2d055
ToppCellBiopsy_Control_(H.)-Epithelial-Ciliated|Biopsy_Control_(H.) / Sample group, Lineage and Cell type

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-0720011579ae434c78e08adf95da49c85616e3ca72d1227bf
ToppCellBronchial-10x5prime-Epithelial-Epi_airway_ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-07200115752aef65f01b06cd98056f17977efe525aee6eb6f
ToppCellBronchial-10x5prime-Epithelial-Epi_airway_ciliated-Ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-07200115755c148238d5c80c1faa3428a917ae8075be2c145
ToppCellTracheal-10x5prime-Epithelial-Epi_airway_ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-07200115731d75c26055177d656df1fbb10b764cebd61e122
ToppCellBiopsy_Other_PF-Epithelial-Ciliated|Biopsy_Other_PF / Sample group, Lineage and Cell type

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-072001157721371698bce8890853fb6b6b01a2c20293b39e9
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_ciliated-Ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-072001157af6a551f83808c1c839df7ba7b1702ca28ea6e1b
ToppCellParenchymal-10x5prime-Epithelial-Epi_airway_ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-07200115785c98da55f7cd4ffdf9d309b56c8cc5d43f3c04c
ToppCellTracheal-10x3prime_v2-Epithelial-Epi_airway_ciliated|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-0720011577cb3e3bd9e851ccb096e0a3471819471d85ebace
ToppCellTracheal-10x5prime-Epithelial-Epi_airway_ciliated-Ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-072001157e1dce91c6c531bb212002a14705e496d77ad3490
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-07200115773ac1cf40ddd764be1100cbfaaa29563665457d8
ToppCellParenchymal-10x5prime-Epithelial-Epi_airway_ciliated-Ciliated|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-07200115712bc7d95c4166d12487081a76d210b7abe5991b0
ToppCellLung_Parenchyma-Control-Epithelial-Epithelial-Ciliated|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-072001157ddd39b754bfaa98249d497dfb7e97ec58617a11a
ToppCellParenchyma_Control_(B.)-Epithelial-TX-Ciliated|Parenchyma_Control_(B.) / Sample group, Lineage and Cell type

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-072001157a521cf837cadf280505ff9d7e641a205af7d6513
ToppCellLung_Parenchyma-Control-Epithelial-Epithelial-Ciliated-|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

DNAH3 ECT2L CFAP43 LRRIQ1 CFAP53 PPP1R42 DNAH11

9.02e-072001157918b576fd9491d23c2bb9d663fa5fb3505cb1c7e
Diseasecentral nervous system disease (implicated_via_orthology)

GRIA1 SEC31B SMARCA1

2.80e-05161113DOID:331 (implicated_via_orthology)
Diseasesystolic blood pressure, waist-hip ratio

HOXC4 HOXC6

8.37e-0541112EFO_0004343, EFO_0006335
Diseasevisceral heterotaxy (implicated_via_orthology)

CC2D2A CFAP53 DNAH11

3.67e-04371113DOID:0050545 (implicated_via_orthology)
DiseasePeptic ulcer and gastro-oesophageal reflux disease (GORD) drug use measurement

TERF1 DNAH11

7.54e-04111112EFO_0009923
DiseaseCiliopathies

SCNN1G CC2D2A DNAH8 DNAH11

8.06e-041101114C4277690
DiseaseBMI-adjusted waist circumference, physical activity measurement

TBX4 HOXA11 HOXC4 HOXC6

1.22e-031231114EFO_0007789, EFO_0008002
DiseaseLimb Deformities, Congenital

HOXA11 HOXD11

1.84e-03171112C0206762
Diseaseautosomal dominant intellectual developmental disorder (is_implicated_in)

GRIA1 MED13

1.84e-03171112DOID:0060307 (is_implicated_in)
DiseaseCocaine Dependence

CES1 GRIA1 CHRNA5 DNAH8

1.91e-031391114C0600427
DiseaseFemale Urogenital Diseases

HOXA10 HOXA11

2.06e-03181112C1720887
Diseasekidney volume

HOXD10 HOXD11

2.06e-03181112EFO_0600044
Diseasemigraine disorder

ONECUT2 BAZ1B RNF213 NLRP1 VSTM4 HOXD10

2.35e-033571116MONDO_0005277
Diseasepulse pressure measurement, alcohol drinking

HOXC4 HOXC6 LNX1

2.36e-03701113EFO_0004329, EFO_0005763
Diseasemean arterial pressure

TBX4 EML6 RNF213 HOXA3 HOXA11 HOXC4 LNX1

2.84e-034991117EFO_0006340
DiseaseBronchiectasis

SCNN1G DNAH11

3.08e-03221112C0006267
Diseasenicotine dependence

CHRNA5 CC2D2A CACNA2D3

3.21e-03781113EFO_0003768

Protein segments in the cluster

PeptideGeneStartEntry
RAKANWLRAFNKVRM

UNC13A

446

Q9UPW8
RLSKMVMKFWANFAR

CES1

491

P23141
AKSRLWQFKEEQMSV

EPG5

321

Q9HCE0
YKTQKLERMETNWRN

ACOT7L

116

Q6ZUV0
QKAWDIQMLFFSRDR

CFAP43

1516

Q8NDM7
WKDRSKKRFSQMLQD

CCDC86

246

Q9H6F5
EMSSKVQRFKATLWL

ANKRD13D

351

Q6ZTN6
KYMAQRQQREKTRWL

ADD3

426

Q9UEY8
KWKTAIREAQTFSRM

BAZ1B

1151

Q9UIG0
NQRLQVTKRMKLSWF

CEACAM21

181

Q3KPI0
LWVLRFKMKQTVNTL

GPR33

51

Q49SQ1
NCWKFFMARVRLQLK

DNAH11

2966

Q96DT5
KSQLRFVQDWFSERM

ECT2L

56

Q008S8
FRLIRKMFSFKVSRW

CCDC70

6

Q6NSX1
RNFIRNSKKMQSWYS

GRAMD1A

66

Q96CP6
TMSIQEFRDLWKQLK

CAPN14

576

A8MX76
KESKFQWRFSREEMH

RFTN1

441

Q14699
AASWEMKRKQSLNFV

MORC1

696

Q86VD1
TERQIKIWFQNRRMK

HOXA3

231

O43365
MTKQQVFLLERWKQR

MGME1

141

Q9BQP7
VLWRKMRDNFQSKEF

MPC1L

6

P0DKB6
AKMLQLSERQVKTWF

HHEX

171

Q03014
LAMQNAWFRKSRFKG

DDX42

631

Q86XP3
LMFAVEKSINRKRLW

ODR4

111

Q5SWX8
MRKLFSLSQSWDRKC

NLRP1

1426

Q9C000
KDSQVKIWFQNRRMK

DBX1

221

A6NMT0
FQNIDKSWIKIMQRA

DNAH8

1521

Q96JB1
SNFFMNARRRSLEKW

ONECUT2

471

O95948
RASIIDKWRKFQGMN

MYO10

1921

Q9HD67
LWLTVMREQKFRSRN

LNX1

351

Q8TBB1
SRKISNQFDWALMRL

LRPPRC

76

P42704
TDRQVKIWFQNRRMK

HOXA10

376

P31260
LKESFKMVNRLNWSS

FOXJ2

421

Q9P0K8
TDRQVKIWFQNRRMK

HOXA11

281

P31270
SKEIRNMKFRSSWVF

FAM3B

176

P58499
WGFKDISTAQQMLKR

LRRIQ1

1546

Q96JM4
NSFVVWSILKRMQKR

LTB4R

36

Q15722
TERQIKIWFQNRRMK

HOXB6

186

P17509
TERQIKIWFQNRRMK

HOXC6

181

P09630
FAKMTWNAKRSLFRT

B3GALT2

11

O43825
NRMLSKENKILQVFW

CBY2

186

Q8NA61
SRQKLVEEQMFSKLW

CFAP53

191

Q96M91
KFIAQVLDRMFLWTF

CHRNA5

421

P30532
KVWKEMKSLREFQRF

CC2D2A

511

Q9P2K1
FGQLMVERNTWLKKA

CCDC141

341

Q6ZP82
KNLDRMKLDWVNVTF

DNAH3

1006

Q8TD57
QMKLEFFQRKFWTAS

CACNA2D3

821

Q8IZS8
KESQVKIWFQNRRMK

DBX2

226

Q6ZNG2
MKLEFLQRKFWAATR

CACNA2D4

856

Q7Z3S7
SWSIGNENFRKMKIF

COL6A5

636

A8TX70
NAIMTQWDRTFKVIK

FMO1

486

Q01740
FLQKKIFRAWFNMVR

CCDC191

836

Q8NCU4
SERQIKIWFQNRRMK

HOXC4

196

P09017
TDRQVKIWFQNRRMK

HOXD10

306

P28358
TDRQVKIWFQNRRMK

HOXD11

306

P31277
MNKLFSFWKRKNETR

ANKRD7

1

Q92527
SRMLNLTDRQVKIWF

HOXC11

266

O43248
KSLLQWVTSRQMRFE

FNTB

271

P49356
KLWDQEMKRCRAFQL

EML6

1626

Q6ZMW3
EFFRRSKIAVFEKMW

GRIA1

671

P42261
MLRAIRDFFWKTGNK

DERA

236

Q9Y315
DFFSIIARRQWQKAK

SCNN1G

556

P51170
RFKYMWKLLRQDQQS

SPACA1

146

Q9HBV2
NSVNLKDIWMFRARL

PHYH

316

O14832
LWRSLNEMKRIFNFR

ALOX15B

206

O15296
WKTFMNRRTAVKKIN

RNF139

516

Q8WU17
ETLEKQVFSLWRQKM

SFI1

516

A8K8P3
FDMVTTWFGAKKRLN

UTP20

2366

O75691
LQRAFARKWEFIFMQ

RGS7

156

P49802
LASDMQWKVRRTLAF

PPP4R1

671

Q8TF05
DWFIKSRTAMEFQRR

SMARCA1

1001

P28370
KNIFQSRKMWIVLFG

SLC35G2

96

Q8TBE7
KIQSWFRMATARKSY

IQGAP2

726

Q13576
IKNIERQFLMNWKAS

PPP1R42

231

Q7Z4L9
NIFKDVFNRIWKMLS

GIMAP7

271

Q8NHV1
KLLDKMTTSFWKRRN

MRPL35

156

Q9NZE8
VKQSELFDRWKSLQM

ST8SIA5

76

O15466
WQFLKVTLEQDSRMK

SEC31B

466

Q9NQW1
LMNRNFVRIGKWFVK

MED13

131

Q9UHV7
KWMLTRKQFGLLSFF

STEAP1

156

Q9UHE8
DFKTWMRTQQKRDTK

GFER

76

P55789
WMRQIVSFDKLKLTN

TBX10

161

O75333
KRWLREVFTKNMLTS

RNF213

911

Q63HN8
MFTRWKQQQRKEKLA

RPF1

66

Q9H9Y2
STSLRKINAAWFKNM

TLR8

296

Q9NR97
ANLGRKDFWRKMFKS

UNC80

1021

Q8N2C7
TEAKMRANQKFRLWR

ZDHHC13

271

Q8IUH4
AILRREMFVFKDQWF

MMP16

351

P51512
QRWLTVERKFALQKM

RINT1

436

Q6NUQ1
MTVVIRKKFSASRFW

SLC27A4

306

Q6P1M0
GRVFISKTARMKWQL

KIF21A

911

Q7Z4S6
WRKKQSDVMRFLLRV

RPL15

11

P61313
RRLEQKFWSQEKNML

SOGA1

646

O94964
FWRCRQNIFDEMKKK

USP47

16

Q96K76
RIMLQKWQKRDISNF

WDFY4

2536

Q6ZS81
QYRADWKSREMKTRQ

TOP1MT

296

Q969P6
ILFFKMREEQIRRWK

SH2D4A

26

Q9H788
LKWRKENIFQMARSQ

SNX27

521

Q96L92
RRKSKQKLGAFLWMQ

TCEAL2

181

Q9H3H9
NWDLFFTMKRNTKVI

PREPL

336

Q4J6C6
KFNNRTSVMLKDRWR

TERF1

411

P54274
DFKFQVWRKMFRALM

TRIM72

271

Q6ZMU5
MQQVKRWSDIRKDSF

UGT2B11

91

O75310
RMKDRKFSWGQQRTN

USP20

326

Q9Y2K6
KWFIEQRLLMFSFVN

ZC3H12D

211

A2A288
ETWKRNKTFNLMRFI

ZNF404

71

Q494X3
RKQDIFWKMVQSRVG

TJP3

461

O95049
KWEKNRDVTMFFQKI

ULBP1

171

Q9BZM6
MLVIVWQSVFNKRKS

VSTM4

196

Q8IW00
WMRQLVSFQKLKLTN

TBX4

161

P57082
RFMEQNTLQKHTRWK

ZNF581

181

Q9P0T4
QKIVRFKRNDSWFSS

ZNF699

121

Q32M78
KVWDRFLSTMKQNAL

UBR4

781

Q5T4S7
MQETFRNLASIGKKW

ZNF433

36

Q8N7K0
KKWLEQFEMALSNIR

VAV3

491

Q9UKW4
KKETRFQWFFQRAEM

MYOM3

1146

Q5VTT5
KQSSRWMRLNFDLCK

MYBPC1

661

Q00872