Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionsingle-stranded RNA binding

KHDRBS3 KHDRBS1 HNRNPA1 HNRNPF RBMX

1.59e-06111365GO:0003727
GeneOntologyMolecularFunctionthreonine-type endopeptidase activity

PSMB8 PSMB6

1.13e-049362GO:0004298
GeneOntologyMolecularFunctionG-rich strand telomeric DNA binding

RPA2 HNRNPA1

1.72e-0411362GO:0098505
GeneOntologyMolecularFunctionsingle-stranded telomeric DNA binding

RPA2 HNRNPA1

2.43e-0413362GO:0043047
GeneOntologyMolecularFunctionsequence-specific single stranded DNA binding

RPA2 HNRNPA1

3.27e-0415362GO:0098847
GeneOntologyMolecularFunctionthreonine-type peptidase activity

PSMB8 PSMB6

5.88e-0420362GO:0070003
GeneOntologyMolecularFunctionmRNA binding

DDX17 SF3B1 KHDRBS3 KHDRBS1 HNRNPA1 RBMX

1.38e-03694366GO:0003729
GeneOntologyMolecularFunctiontelomeric DNA binding

RPA2 HNRNPA1

2.36e-0340362GO:0042162
GeneOntologyBiologicalProcessRNA splicing

FAM98A DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

9.61e-095023610GO:0008380
GeneOntologyBiologicalProcessregulation of alternative mRNA splicing, via spliceosome

DDX17 KHDRBS3 KHDRBS1 HNRNPA1 RBMX

5.67e-0859365GO:0000381
GeneOntologyBiologicalProcessregulation of RNA splicing

DDX17 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

6.04e-08207367GO:0043484
GeneOntologyBiologicalProcessregulation of mRNA splicing, via spliceosome

DDX17 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 RBMX

8.89e-08129366GO:0048024
GeneOntologyBiologicalProcessregulation of ryanodine-sensitive calcium-release channel activity

JPH1 JPH2 JPH4 JPH3

1.14e-0726364GO:0060314
GeneOntologyBiologicalProcessmRNA splicing, via spliceosome

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

1.51e-07358368GO:0000398
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions with bulged adenosine as nucleophile

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

1.51e-07358368GO:0000377
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

1.64e-07362368GO:0000375
GeneOntologyBiologicalProcessalternative mRNA splicing, via spliceosome

DDX17 KHDRBS3 KHDRBS1 HNRNPA1 RBMX

2.49e-0779365GO:0000380
GeneOntologyBiologicalProcessregulation of mRNA processing

DDX17 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 RBMX

2.96e-07158366GO:0050684
GeneOntologyBiologicalProcessmRNA processing

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

3.21e-07551369GO:0006397
GeneOntologyBiologicalProcesscalcium ion transport into cytosol

JPH1 JPH2 JPH4 JPH3

8.34e-0742364GO:0060402
GeneOntologyBiologicalProcessregulation of calcium ion transmembrane transporter activity

JPH1 JPH2 JPH4 JPH3

1.96e-0592364GO:1901019
GeneOntologyBiologicalProcessmRNA metabolic process

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

2.08e-05917369GO:0016071
GeneOntologyBiologicalProcessregulation of release of sequestered calcium ion into cytosol

JPH1 JPH2 JPH4 JPH3

2.51e-0598364GO:0051279
GeneOntologyBiologicalProcessRNA processing

FAM98A DDX17 SF3B1 ZFC3H1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

3.19e-0515003611GO:0006396
GeneOntologyBiologicalProcessregulation of cation channel activity

JPH1 JPH2 JPH4 JPH3

9.57e-05138364GO:2001257
GeneOntologyBiologicalProcessregulation of mRNA metabolic process

DDX17 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 RBMX

1.07e-04443366GO:1903311
GeneOntologyBiologicalProcessrelease of sequestered calcium ion into cytosol

JPH1 JPH2 JPH4 JPH3

1.19e-04146364GO:0051209
GeneOntologyBiologicalProcessnegative regulation of sequestering of calcium ion

JPH1 JPH2 JPH4 JPH3

1.22e-04147364GO:0051283
GeneOntologyBiologicalProcessregulation of sequestering of calcium ion

JPH1 JPH2 JPH4 JPH3

1.29e-04149364GO:0051282
GeneOntologyBiologicalProcesssequestering of calcium ion

JPH1 JPH2 JPH4 JPH3

1.43e-04153364GO:0051208
GeneOntologyBiologicalProcesspositive regulation of RNA splicing

KHDRBS3 RBMXL1 RBMX

1.80e-0463363GO:0033120
GeneOntologyBiologicalProcessneuromuscular process controlling balance

JPH4 ABR JPH3

2.91e-0474363GO:0050885
GeneOntologyBiologicalProcessintracellular calcium ion homeostasis

JPH1 JPH2 JPH4 SV2B JPH3

3.76e-04359365GO:0006874
GeneOntologyBiologicalProcessregulation of RNA export from nucleus

KHDRBS1 AKAP8L

3.96e-0417362GO:0046831
GeneOntologyBiologicalProcesscalcium ion transmembrane import into cytosol

JPH1 JPH2 JPH4 JPH3

5.39e-04217364GO:0097553
GeneOntologyBiologicalProcesscalcium ion homeostasis

JPH1 JPH2 JPH4 SV2B JPH3

5.42e-04389365GO:0055074
GeneOntologyBiologicalProcessregulation of calcium ion transmembrane transport

JPH1 JPH2 JPH4 JPH3

5.48e-04218364GO:1903169
GeneOntologyBiologicalProcessregulation of nucleobase-containing compound transport

KHDRBS1 AKAP8L

5.52e-0420362GO:0032239
GeneOntologyBiologicalProcesspositive regulation of cytosolic calcium ion concentration

JPH1 JPH2 JPH4 JPH3

6.07e-04224364GO:0007204
GeneOntologyBiologicalProcessRNA export from nucleus

KHDRBS1 HNRNPA1 AKAP8L

6.24e-0496363GO:0006405
GeneOntologyBiologicalProcessregulation of monoatomic ion transmembrane transporter activity

JPH1 JPH2 JPH4 JPH3

9.99e-04256364GO:0032412
GeneOntologyBiologicalProcessmaintenance of location in cell

JPH1 JPH2 JPH4 JPH3

1.04e-03259364GO:0051651
GeneOntologyBiologicalProcessregulation of transmembrane transporter activity

JPH1 JPH2 JPH4 JPH3

1.15e-03266364GO:0022898
GeneOntologyBiologicalProcessnegative regulation of regulated secretory pathway

ABR TRIM9

1.42e-0332362GO:1903306
GeneOntologyBiologicalProcessregulation of transporter activity

JPH1 JPH2 JPH4 JPH3

1.77e-03299364GO:0032409
GeneOntologyCellularComponentjunctional membrane complex

JPH1 JPH2 JPH4 JPH3

1.04e-099374GO:0030314
GeneOntologyCellularComponentjunctional sarcoplasmic reticulum membrane

JPH1 JPH2 JPH4 JPH3

1.73e-0910374GO:0014701
GeneOntologyCellularComponentsarcoplasmic reticulum membrane

JPH1 JPH2 JPH4 JPH3

1.17e-0645374GO:0033017
GeneOntologyCellularComponentsarcoplasmic reticulum

JPH1 JPH2 JPH4 JPH3

1.74e-0588374GO:0016529
GeneOntologyCellularComponentsupraspliceosomal complex

RBMXL1 RBMX

1.82e-054372GO:0044530
GeneOntologyCellularComponentcatalytic step 2 spliceosome

SF3B1 HNRNPA1 HNRNPF RBMX

2.56e-0597374GO:0071013
GeneOntologyCellularComponentspliceosomal complex

SF3B1 RBMXL1 HNRNPA1 HNRNPF RBMX

3.66e-05215375GO:0005681
GeneOntologyCellularComponentsarcoplasm

JPH1 JPH2 JPH4 JPH3

4.82e-05114374GO:0016528
GeneOntologyCellularComponentproteasome core complex, beta-subunit complex

PSMB8 PSMB6

1.66e-0411372GO:0019774
GeneOntologyCellularComponentproteasome core complex

PSMB8 PSMB6

5.68e-0420372GO:0005839
GeneOntologyCellularComponentribonucleoprotein complex

DDX17 SF3B1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

4.44e-031194377GO:1990904
DomainJunctophilin

JPH1 JPH2 JPH4 JPH3

1.16e-114364IPR017191
DomainMORN

JPH1 JPH2 ALS2 JPH4 JPH3

3.94e-1114365SM00698
DomainMORN

JPH1 JPH2 ALS2 JPH4 JPH3

5.90e-1115365PF02493
DomainMORN

JPH1 JPH2 ALS2 JPH4 JPH3

5.90e-1115365IPR003409
DomainQua1

KHDRBS3 KHDRBS1

1.08e-053362PF16274
DomainQua1_dom

KHDRBS3 KHDRBS1

1.08e-053362IPR032571
DomainSam68-YY

KHDRBS3 KHDRBS1

1.08e-053362IPR032335
DomainSam68-YY

KHDRBS3 KHDRBS1

1.08e-053362PF16568
DomainRBM1CTR

RBMXL1 RBMX

1.00e-048362PF08081
DomainRBM1CTR

RBMXL1 RBMX

1.00e-048362IPR012604
DomainPept_T1A_subB

PSMB8 PSMB6

1.61e-0410362IPR000243
DomainPROTEASOME_BETA_2

PSMB8 PSMB6

1.97e-0411362PS51476
DomainProteasome_suB-type

PSMB8 PSMB6

1.97e-0411362IPR023333
DomainPROTEASOME_BETA_1

PSMB8 PSMB6

1.97e-0411362PS00854
DomainProteasome_bsu_CS

PSMB8 PSMB6

2.36e-0412362IPR016050
DomainProteasome

PSMB8 PSMB6

6.05e-0419362PF00227
DomainProteasome_sua/b

PSMB8 PSMB6

6.05e-0419362IPR001353
DomainRRM_1

RBMXL1 HNRNPA1 HNRNPF RBMX

6.66e-04208364PF00076
DomainRRM

RBMXL1 HNRNPA1 HNRNPF RBMX

7.80e-04217364SM00360
DomainRRM_dom_euk

RBMXL1 RBMX

8.91e-0423362IPR003954
DomainRRM_1

RBMXL1 RBMX

8.91e-0423362SM00361
DomainRRM_dom

RBMXL1 HNRNPA1 HNRNPF RBMX

9.23e-04227364IPR000504
DomainRRM

RBMXL1 HNRNPA1 HNRNPF RBMX

9.69e-04230364PS50102
Domain-

PSMB8 PSMB6

9.71e-04243623.60.20.10
Domain-

RBMXL1 HNRNPA1 HNRNPF RBMX

1.21e-032443643.30.70.330
DomainNucleotide-bd_a/b_plait

RBMXL1 HNRNPA1 HNRNPF RBMX

1.48e-03258364IPR012677
DomainNtn_hydrolases_N

PSMB8 PSMB6

1.84e-0333362IPR029055
DomainKH_1

KHDRBS3 KHDRBS1

2.43e-0338362PF00013
DomainGDS_CDC24_CS

ALS2 ABR

2.56e-0339362IPR001331
Domain-

KHDRBS3 KHDRBS1

2.56e-03393623.30.1370.10
DomainKH

KHDRBS3 KHDRBS1

2.69e-0340362SM00322
DomainKH_dom

KHDRBS3 KHDRBS1

2.69e-0340362IPR004087
DomainKH_TYPE_1

KHDRBS3 KHDRBS1

2.96e-0342362PS50084
DomainKH_dom_type_1

KHDRBS3 KHDRBS1

3.25e-0344362IPR004088
DomainDH_1

ALS2 ABR

6.55e-0363362PS00741
PathwayREACTOME_PTK6_REGULATES_PROTEINS_INVOLVED_IN_RNA_PROCESSING

KHDRBS3 KHDRBS1

3.52e-055272M27731
PathwayREACTOME_PTK6_REGULATES_PROTEINS_INVOLVED_IN_RNA_PROCESSING

KHDRBS3 KHDRBS1

3.52e-055272MM15481
Pubmed

Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.

FAM98A DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

1.17e-11421361034650049
Pubmed

Characterization of gene regulation and protein interaction networks for Matrin 3 encoding mutations linked to amyotrophic lateral sclerosis and myopathy.

DDX17 SF3B1 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

1.89e-1110936729511296
Pubmed

Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.

FAM98A UBAP2 DDX17 SF3B1 KHDRBS3 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX

1.61e-10551361034728620
Pubmed

T-STAR/ETOILE: a novel relative of SAM68 that interacts with an RNA-binding protein implicated in spermatogenesis.

KHDRBS3 KHDRBS1 HNRNPA1 RBMX

2.02e-101036410332027
Pubmed

New molecular components supporting ryanodine receptor-mediated Ca(2+) release: roles of junctophilin and TRIC channel in embryonic cardiomyocytes.

JPH1 JPH2 JPH4 JPH3

4.76e-101236419095005
Pubmed

RBMY, a probable human spermatogenesis factor, and other hnRNP G proteins interact with Tra2beta and affect splicing.

KHDRBS3 KHDRBS1 HNRNPA1 RBMX

6.86e-101336410749975
Pubmed

Characterization of human junctophilin subtype genes.

JPH1 JPH2 JPH3

1.02e-09336310891348
Pubmed

Junctophilins: a novel family of junctional membrane complex proteins.

JPH1 JPH2 JPH3

1.02e-09336310949023
Pubmed

Junctophilins 1, 2, and 3 all support voltage-induced Ca2+ release despite considerable divergence.

JPH1 JPH2 JPH3

1.02e-09336335089322
Pubmed

Coexpression of junctophilin type 3 and type 4 in brain.

JPH1 JPH4 JPH3

1.02e-09336314559359
Pubmed

Dynamic protein-protein interaction wiring of the human spliceosome.

DDX17 SF3B1 KHDRBS3 KHDRBS1 HNRNPA1 HNRNPF RBMX

1.22e-0919736722365833
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

FAM98A DDX17 SF3B1 ZFC3H1 KHDRBS3 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

2.46e-09731361029298432
Pubmed

A systems-wide screen identifies substrates of the SCFβTrCP ubiquitin ligase.

SF3B1 KHDRBS3 KHDRBS1 TRIM9 HNRNPF AKAP8L RBMX

3.80e-0923236725515538
Pubmed

Junctophilin-mediated channel crosstalk essential for cerebellar synaptic plasticity.

JPH1 JPH4 JPH3

4.07e-09436317347645
Pubmed

Deubiquitinating enzyme PSMD14 promotes tumor metastasis through stabilizing SNAIL in human esophageal squamous cell carcinoma.

FAM98A DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

4.65e-0938336829331416
Pubmed

The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells.

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX TLN1

4.67e-0923936726641092
Pubmed

Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX

5.39e-0924436729884807
Pubmed

Circular RNA circPVT1 promotes nasopharyngeal carcinoma metastasis via the β-TrCP/c-Myc/SRSF1 positive feedback loop.

FAM98A UBAP2 DDX17 KHDRBS1 HNRNPA1 HNRNPF RBMX

8.35e-0926036736199071
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

FLG FAM98A DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX

8.52e-0960536928977666
Pubmed

Identification of intracellular proteins associated with the EBV-encoded nuclear antigen 5 using an efficient TAP procedure and FT-ICR mass spectrometry.

DDX17 SF3B1 KHDRBS1 HNRNPA1 AKAP8L PSMB6

1.06e-0815136618457437
Pubmed

TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.

FAM98A DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

1.14e-0843036838172120
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

FLG FAM98A DDX17 SF3B1 ZFC3H1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

1.22e-081442361235575683
Pubmed

Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.

DDX17 SF3B1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF RBMX TLN1

1.62e-0865236931180492
Pubmed

New roles for the de-ubiquitylating enzyme OTUD4 in an RNA-protein network and RNA granules.

FAM98A DDX17 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

1.99e-0846236831138677
Pubmed

PINK1 Content in Mitochondria is Regulated by ER-Associated Degradation.

FLG UBAP2 DDX17 SF3B1 KHDRBS1 HNRNPA1 RBMX TLN1

2.55e-0847736831300519
Pubmed

Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.

FAM98A DDX17 SF3B1 ZFC3H1 KHDRBS1 HNRNPA1 HNRNPF AKAP8L

2.95e-0848636830940648
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX TLN1 PSMB6 TJP3

3.17e-081247361127684187
Pubmed

BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.

UBAP2 DDX17 SF3B1 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX TLN1

3.41e-0871136933022573
Pubmed

C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.

FAM98A DDX17 SF3B1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX PSMB6

3.44e-081257361137317656
Pubmed

The STAR/GSG family protein rSLM-2 regulates the selection of alternative splice sites.

KHDRBS3 KHDRBS1 RBMX

3.55e-08736311118435
Pubmed

New interaction partners for Nek4.1 and Nek4.2 isoforms: from the DNA damage response to RNA splicing.

JPH1 DDX17 SF3B1 RBMXL1 HNRNPA1 HNRNPF AKAP8L DSE

4.47e-0851336825798074
Pubmed

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.

SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

6.03e-0834736716033648
Pubmed

SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes.

UBAP2 DDX17 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX

6.78e-0835336727545878
Pubmed

The Deubiquitinating Enzyme USP48 Interacts with the Retinal Degeneration-Associated Proteins UNC119a and ARL3.

DDX17 KHDRBS1 RBMXL1 RPA2 HNRNPA1 SV2B HNRNPF PSMB6

7.84e-0855236836293380
Pubmed

Cellular RNA binding proteins NS1-BP and hnRNP K regulate influenza A virus RNA splicing.

DDX17 HNRNPA1 HNRNPF RBMX

8.60e-084036423825951
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

FLG DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

9.92e-081082361038697112
Pubmed

The RNA-binding protein HuR is a novel target of Pirh2 E3 ubiquitin ligase.

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX

9.95e-0822036634091597
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

FAM98A DDX17 SF3B1 KHDRBS3 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX

1.00e-0780736922681889
Pubmed

Nuclear organization of nucleotide excision repair is mediated by RING1B dependent H2A-ubiquitylation.

DDX17 SF3B1 RBMXL1 HNRNPA1 RBMX

1.10e-0711236528416769
Pubmed

Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage.

FAM98A DDX17 SF3B1 RBMXL1 HNRNPA1 HNRNPF RBMX TLN1 PSMB6

1.46e-0784436925963833
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

FAM98A UBAP2 DDX17 ZFC3H1 KHDRBS1 HNRNPA1 AKAP8L RBMX PSMB6

1.51e-0784736935850772
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

FAM98A UBAP2 DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX

1.79e-0761536831048545
Pubmed

Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX

1.88e-0724536621182205
Pubmed

CRISPR activation screen identifies BCL-2 proteins and B3GNT2 as drivers of cancer resistance to T cell-mediated cytotoxicity.

FLG DDX17 KHDRBS1 HNRNPA1 HNRNPF RBMX PSMB6

2.13e-0741836735338135
Pubmed

Integrative genomics positions MKRN1 as a novel ribonucleoprotein within the embryonic stem cell gene regulatory network.

FAM98A HNRNPA1 HNRNPF RBMX

2.53e-075236426265008
Pubmed

Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein-protein interaction network.

DDX17 RPA2 HNRNPA1 HNRNPF RBMX

2.90e-0713636526979993
Pubmed

The WTX Tumor Suppressor Interacts with the Transcriptional Corepressor TRIM28.

KHDRBS1 HNRNPF AKAP8L

4.59e-071536325882849
Pubmed

A Noncanonical Role of Fructose-1, 6-Bisphosphatase 1 Is Essential for Inhibition of Notch1 in Breast Cancer.

DDX17 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF

4.65e-0728636632041737
Pubmed

Proteomic analysis of integrin-associated complexes identifies RCC2 as a dual regulator of Rac1 and Arf6.

DDX17 SF3B1 RPA2 HNRNPA1 HNRNPF RBMX TLN1 PSMB6

5.13e-0770736819738201
Pubmed

WW domains provide a platform for the assembly of multiprotein networks.

UBAP2 DDX17 SF3B1 KHDRBS1 HNRNPF

5.38e-0715436516055720
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

FAM98A DDX17 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

5.47e-0771336829802200
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX PSMB6

5.53e-0771436828302793
Pubmed

Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.

FAM98A DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX

6.20e-0772536827025967
Pubmed

UBE2O promotes lipid metabolic reprogramming and liver cancer progression by mediating HADHA ubiquitination.

FAM98A UBAP2 DDX17 KHDRBS1 RBMXL1 RPA2 PSMB6

6.27e-0749136736273042
Pubmed

CHK2-BRCA1 tumor-suppressor axis restrains oncogenic Aurora-A kinase to ensure proper mitotic microtubule assembly.

FAM98A UBAP2 DDX17 SF3B1 KHDRBS1 HNRNPF TLN1

6.53e-0749436726831064
Pubmed

Proteome-wide identification of HSP70/HSC70 chaperone clients in human cells.

FAM98A UBAP2 DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX TLN1 PSMB6

8.50e-071367361032687490
Pubmed

Structural basis of RNA recognition and dimerization by the STAR proteins T-STAR and Sam68.

KHDRBS3 KHDRBS1

1.04e-06236226758068
Pubmed

A versatile single-plasmid system for tissue-specific and inducible control of gene expression in transgenic mice.

JPH1 JPH2

1.04e-06236221518849
Pubmed

Deficiency of triad junction and contraction in mutant skeletal muscle lacking junctophilin type 1.

JPH1 JPH2

1.04e-06236211535622
Pubmed

Functional uncoupling between Ca2+ release and afterhyperpolarization in mutant hippocampal neurons lacking junctophilins.

JPH4 JPH3

1.04e-06236216809425
Pubmed

The RNA-binding protein Sam68 modulates the alternative splicing of Bcl-x.

KHDRBS1 HNRNPA1

1.04e-06236217371836
Pubmed

Junctophilin damage contributes to early strength deficits and EC coupling failure after eccentric contractions.

JPH1 JPH2

1.04e-06236219940065
Pubmed

Binding site density enables paralog-specific activity of SLM2 and Sam68 proteins in Neurexin2 AS4 splicing control.

KHDRBS3 KHDRBS1

1.04e-06236227994030
Pubmed

Deficiency of triad formation in developing skeletal muscle cells lacking junctophilin type 1.

JPH1 JPH2

1.04e-06236212135771
Pubmed

Salpalpha and Salpbeta, growth-arresting homologs of Sam68.

KHDRBS3 KHDRBS1

1.04e-06236210564820
Pubmed

Lysosomal Signaling Licenses Embryonic Stem Cell Differentiation via Inactivation of Tfe3.

ALS2 ZFC3H1 RBMXL1 RPA2 HNRNPA1 HNRNPF

1.11e-0633236630595499
Pubmed

PRP19 transforms into a sensor of RPA-ssDNA after DNA damage and drives ATR activation via a ubiquitin-mediated circuitry.

DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF

1.27e-0634036624332808
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

FAM98A DDX17 SF3B1 KHDRBS1 TRIM9 HNRNPA1 SV2B HNRNPF RBMX TLN1

1.29e-061431361037142655
Pubmed

Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.

SF3B1 HNRNPA1 HNRNPF RBMX

1.45e-068036411991638
Pubmed

SPATA2 Links CYLD to LUBAC, Activates CYLD, and Controls LUBAC Signaling.

FLG DDX17 SF3B1 HNRNPA1 HNRNPF RBMX PSMB6

1.47e-0655836727591049
Pubmed

Tumor suppressor BAP1 nuclear import is governed by transportin-1.

DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF AKAP8L TLN1 PSMB6

1.91e-06114936935446349
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX TLN1

1.94e-0658236720467437
Pubmed

DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation.

DDX17 HNRNPA1 HNRNPF RBMX

2.22e-068936422446626
Pubmed

The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation.

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX PSMB6

2.48e-0660436737616343
Pubmed

Identification of a USP9X Substrate NFX1-123 by SILAC-Based Quantitative Proteomics.

FAM98A DDX17 HNRNPA1 HNRNPF RBMX PSMB6

2.57e-0638436631059266
Pubmed

Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.

UBAP2 DDX17 SF3B1 HNRNPF RBMX

3.11e-0622036524550385
Pubmed

The splicing regulator Sam68 binds to a novel exonic splicing silencer and functions in SMN2 alternative splicing in spinal muscular atrophy.

KHDRBS1 HNRNPA1

3.12e-06336220186123
Pubmed

Junctophilin 1 and 2 proteins interact with the L-type Ca2+ channel dihydropyridine receptors (DHPRs) in skeletal muscle.

JPH1 JPH2

3.12e-06336222020936
Pubmed

Transcriptional control of CBX5 by the RNA binding proteins RBMX and RBMXL1 maintains chromatin state in myeloid leukemia.

RBMXL1 RBMX

3.12e-06336234458856
Pubmed

Abnormal features in mutant cerebellar Purkinje cells lacking junctophilins.

JPH4 JPH3

3.12e-06336217904530
Pubmed

RBMX is a novel hepatic transcriptional regulator of SREBP-1c gene response to high-fructose diet.

RBMXL1 RBMX

3.12e-06336217188681
Pubmed

Ca2+-dependent proteolysis of junctophilin-1 and junctophilin-2 in skeletal and cardiac muscle.

JPH1 JPH2

3.12e-06336223148318
Pubmed

SAM68-Specific Splicing Is Required for Proper Selection of Alternative 3' UTR Isoforms in the Nervous System.

KHDRBS3 KHDRBS1

3.12e-06336231805436
Pubmed

hnRNP A1 and hnRNP F modulate the alternative splicing of exon 11 of the insulin receptor gene.

HNRNPA1 HNRNPF

3.12e-06336222132154
Pubmed

Physical interaction of junctophilin and the CaV1.1 C terminus is crucial for skeletal muscle contraction.

JPH1 JPH2

3.12e-06336229632175
Pubmed

Inhibition of HIV-1 gene expression by Sam68 Delta C: multiple targets but a common mechanism?

KHDRBS3 KHDRBS1

3.12e-06336219254361
Pubmed

RBMY evolved on the Y chromosome from a ubiquitously transcribed X-Y identical gene.

RBMXL1 RBMX

3.12e-06336210391207
Pubmed

The tumour-suppressor protein ASPP1 is nuclear in human germ cells and can modulate ratios of CD44 exon V5 spliced isoforms in vivo.

KHDRBS3 KHDRBS1

3.12e-06336216474851
Pubmed

RBMX suppresses tumorigenicity and progression of bladder cancer by interacting with the hnRNP A1 protein to regulate PKM alternative splicing.

HNRNPA1 RBMX

3.12e-06336233564070
Pubmed

Mapping of determinants involved in the stimulation of HIV-1 expression by Sam68.

KHDRBS3 KHDRBS1

3.12e-06336219091369
Pubmed

Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.

FAM98A DDX17 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

3.14e-0662636733644029
Pubmed

Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy.

FLG DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX

3.67e-0664136736057605
Pubmed

TNIP2 is a Hub Protein in the NF-κB Network with Both Protein and RNA Mediated Interactions.

FAM171A1 FAM98A DDX17 ABR KHDRBS1 HNRNPA1 HNRNPF RBMX

3.71e-0692236827609421
Pubmed

Identifying and quantifying in vivo methylation sites by heavy methyl SILAC.

KHDRBS1 HNRNPA1 RBMX

4.06e-063036315782174
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

JPH1 DDX17 SF3B1 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

4.58e-0694936836574265
Pubmed

Genome-Wide CRISPR-Cas9 Screens Expose Genetic Vulnerabilities and Mechanisms of Temozolomide Sensitivity in Glioblastoma Stem Cells.

UBAP2 TRIM9 RBMX TLN1

4.62e-0610736430995489
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

FAM98A UBAP2 DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX

4.76e-0695436836373674
Pubmed

Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1.

DDX17 SF3B1 HNRNPA1 HNRNPF RBMX

4.85e-0624136523125841
Pubmed

Proteomic analysis of complexes formed by human topoisomerase I.

DDX17 SF3B1 HNRNPA1

4.95e-063236315848144
Pubmed

Comprehensive proteomic analysis of the human spliceosome.

SF3B1 HNRNPA1 HNRNPF RBMX

4.98e-0610936412226669
InteractionRBM7 interactions

DDX17 SF3B1 KHDRBS3 KHDRBS1 HNRNPA1 HNRNPF RBMX

2.27e-09126367int:RBM7
InteractionTRIM31 interactions

FAM98A DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

4.59e-094543610int:TRIM31
InteractionZC3H18 interactions

FAM98A JPH4 DDX17 SF3B1 ZFC3H1 KHDRBS3 RBMXL1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX

2.04e-088773612int:ZC3H18
InteractionSNRPC interactions

DDX17 KHDRBS3 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX

5.80e-08440369int:SNRPC
InteractionKHDRBS2 interactions

DDX17 ZFC3H1 KHDRBS3 KHDRBS1 HNRNPA1 RBMX

1.02e-07129366int:KHDRBS2
InteractionFBXW11 interactions

SF3B1 KHDRBS3 KHDRBS1 RBMXL1 TRIM9 HNRNPA1 HNRNPF AKAP8L RBMX

1.07e-07473369int:FBXW11
InteractionU2AF2 interactions

DDX17 SF3B1 KHDRBS3 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX TLN1 PSMB6

1.37e-076513610int:U2AF2
InteractionRALY interactions

DDX17 SF3B1 ZFC3H1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 RBMX

1.72e-07356368int:RALY
InteractionPTBP2 interactions

KHDRBS3 KHDRBS1 RPA2 HNRNPA1 HNRNPF

1.75e-0772365int:PTBP2
InteractionYLPM1 interactions

DDX17 ZFC3H1 KHDRBS1 RPA2 HNRNPA1 RBMX

3.65e-07160366int:YLPM1
InteractionPRMT1 interactions

FAM98A UBAP2 DDX17 SF3B1 KHDRBS3 KHDRBS1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX

3.92e-079293611int:PRMT1
InteractionFUS interactions

FAM98A UBAP2 DDX17 SF3B1 KHDRBS3 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

5.52e-077573610int:FUS
InteractionRPA4 interactions

RBSN UBAP2 DDX17 SF3B1 RPA2 HNRNPA1 HNRNPF TLN1

1.05e-06452368int:RPA4
InteractionKIF23 interactions

FLG DDX17 SF3B1 ZFC3H1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX

1.10e-0610313611int:KIF23
InteractionRBMX interactions

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF RBMX

1.22e-06461368int:RBMX
InteractionHNRNPC interactions

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF RBMX

1.25e-06634369int:HNRNPC
InteractionKIF20A interactions

FAM98A DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX IRX4

1.34e-0610523611int:KIF20A
InteractionMATR3 interactions

DDX17 SF3B1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX

1.64e-06655369int:MATR3
InteractionRBM45 interactions

DDX17 ZFC3H1 RPA2 HNRNPA1 HNRNPF RBMX

1.65e-06207366int:RBM45
InteractionSNRPA interactions

DDX17 SF3B1 ZFC3H1 KHDRBS3 KHDRBS1 RPA2 HNRNPA1 RBMX

1.70e-06482368int:SNRPA
InteractionNCOA5 interactions

KHDRBS3 KHDRBS1 HNRNPA1 RBMX JPH3

2.33e-06121365int:NCOA5
InteractionMTF1 interactions

DDX17 SF3B1 RBMXL1 HNRNPA1 RBMX

2.53e-06123365int:MTF1
InteractionOBSL1 interactions

PSMB8 JPH4 DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX TLN1 PSMB6

2.70e-069023610int:OBSL1
InteractionSYNCRIP interactions

DDX17 SF3B1 KHDRBS3 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF TLN1

3.61e-06721369int:SYNCRIP
InteractionKHDRBS1 interactions

DDX17 KHDRBS3 KHDRBS1 RPA2 HNRNPA1 RBMX PSMB6

3.70e-06373367int:KHDRBS1
InteractionHNRNPR interactions

DDX17 SF3B1 KHDRBS3 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

3.73e-06536368int:HNRNPR
InteractionB3GNT2 interactions

FLG DDX17 KHDRBS1 HNRNPA1 HNRNPF RBMX TLN1 PSMB6

4.05e-06542368int:B3GNT2
InteractionSNAI1 interactions

FAM98A DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

4.27e-06546368int:SNAI1
InteractionSFPQ interactions

FAM98A DDX17 SF3B1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 RBMX

5.36e-06563368int:SFPQ
InteractionRNF31 interactions

UBAP2 DDX17 KHDRBS1 HNRNPA1 HNRNPF AKAP8L RBMX

6.14e-06403367int:RNF31
InteractionMIR138-1 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

6.44e-0668364int:MIR138-1
InteractionTENT5B interactions

PSMB8 UBAP2 HNRNPF AKAP8L

6.82e-0669364int:TENT5B
InteractionNEK4 interactions

JPH1 DDX17 SF3B1 RBMXL1 HNRNPA1 HNRNPF AKAP8L DSE

6.83e-06582368int:NEK4
InteractionMIR9-3 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

7.23e-0670364int:MIR9-3
InteractionCUL2 interactions

FLG FAM98A DDX17 RPA2 TRIM9 HNRNPA1 HNRNPF AKAP8L

7.64e-06591368int:CUL2
InteractionMIR140 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

7.65e-0671364int:MIR140
InteractionPCDHB14 interactions

KHDRBS3 AKAP8L RBMX

7.88e-0622363int:PCDHB14
InteractionSF3A2 interactions

DDX17 SF3B1 RPA2 HNRNPA1 RBMX TLN1

8.10e-06273366int:SF3A2
InteractionMIR18A interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

8.55e-0673364int:MIR18A
InteractionMIR29B1 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

8.55e-0673364int:MIR29B1
InteractionMIR20A interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

9.02e-0674364int:MIR20A
InteractionMIR15A interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

9.52e-0675364int:MIR15A
InteractionMIR7-3 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.00e-0576364int:MIR7-3
InteractionMIR16-1 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.00e-0576364int:MIR16-1
InteractionMIR199A2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.00e-0576364int:MIR199A2
InteractionMIR9-2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.06e-0577364int:MIR9-2
InteractionMIR200A interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.06e-0577364int:MIR200A
InteractionCELF1 interactions

UBAP2 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

1.10e-05288366int:CELF1
InteractionMIR98 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.11e-0578364int:MIR98
InteractionMIR222 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.17e-0579364int:MIR222
InteractionMIR1-2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.17e-0579364int:MIR1-2
InteractionMIR34C interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.17e-0579364int:MIR34C
InteractionC9orf72 interactions

FAM98A DDX17 SF3B1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX PSMB6

1.19e-0513193611int:C9orf72
InteractionMIR143 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.23e-0580364int:MIR143
InteractionWWP2 interactions

FAM98A UBAP2 DDX17 SF3B1 KHDRBS3 KHDRBS1 HNRNPA1 HNRNPF RBMX

1.24e-05840369int:WWP2
InteractionMIR145 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.29e-0581364int:MIR145
InteractionBRD7 interactions

FAM98A DDX17 SF3B1 ZFC3H1 KHDRBS1 HNRNPA1 HNRNPF AKAP8L

1.32e-05637368int:BRD7
InteractionMCM2 interactions

FAM98A DDX17 SF3B1 RBMXL1 RPA2 HNRNPA1 HNRNPF RBMX TLN1 PSMB6

1.34e-0510813610int:MCM2
InteractionMIR10B interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.36e-0582364int:MIR10B
InteractionHNRNPK interactions

DDX17 SF3B1 ZFC3H1 KHDRBS3 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX

1.40e-05853369int:HNRNPK
InteractionRBM15 interactions

DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1

1.41e-05175365int:RBM15
InteractionMIR106A interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.42e-0583364int:MIR106A
InteractionSF1 interactions

DDX17 SF3B1 RPA2 HNRNPA1 HNRNPF RBMX

1.49e-05304366int:SF1
InteractionMIR31 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.49e-0584364int:MIR31
InteractionMIR7-2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.49e-0584364int:MIR7-2
InteractionMIR199A1 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.49e-0584364int:MIR199A1
InteractionMIR200B interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.49e-0584364int:MIR200B
InteractionMIR107 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.57e-0585364int:MIR107
InteractionMIR17 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.57e-0585364int:MIR17
InteractionMIR18B interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.57e-0585364int:MIR18B
InteractionMIR93 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.57e-0585364int:MIR93
InteractionMIR9-1 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.57e-0585364int:MIR9-1
InteractionMIR16-2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.57e-0585364int:MIR16-2
InteractionWDR5 interactions

UBAP2 DDX17 SF3B1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF RBMX TLN1

1.57e-0511013610int:WDR5
InteractionNFX1 interactions

FAM98A DDX17 RPA2 HNRNPA1 HNRNPF RBMX PSMB6

1.58e-05466367int:NFX1
InteractionACE2 interactions

FLG FAM98A DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF RBMX TLN1

1.63e-0511063610int:ACE2
InteractionMIR20B interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.64e-0586364int:MIR20B
InteractionMIR29A interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.72e-0587364int:MIR29A
InteractionLARP7 interactions

FLG DDX17 SF3B1 KHDRBS1 RBMXL1 RPA2 HNRNPA1 HNRNPF RBMX PSMB6

1.72e-0511133610int:LARP7
InteractionATXN2 interactions

FAM98A DDX17 KHDRBS3 KHDRBS1 RPA2 HNRNPA1

1.73e-05312366int:ATXN2
InteractionMYCN interactions

FAM98A DDX17 SF3B1 ZFC3H1 KHDRBS3 KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

1.73e-0513733611int:MYCN
InteractionCUL1 interactions

FAM98A DDX17 SF3B1 RPA2 TRIM9 HNRNPA1 HNRNPF AKAP8L PSMB6

1.73e-05876369int:CUL1
InteractionMIR141 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.80e-0588364int:MIR141
InteractionUSP48 interactions

DDX17 KHDRBS1 RPA2 HNRNPA1 SV2B HNRNPF RBMX PSMB6

1.86e-05668368int:USP48
InteractionMIR29C interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.88e-0589364int:MIR29C
InteractionECT2 interactions

DDX17 SF3B1 ABR KHDRBS1 RBMXL1 HNRNPA1 HNRNPF AKAP8L RBMX

1.92e-05887369int:ECT2
InteractionMIR221 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.96e-0590364int:MIR221
InteractionMIR92A2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

1.96e-0590364int:MIR92A2
InteractionCAND1 interactions

FAM98A DDX17 SF3B1 KHDRBS1 RPA2 HNRNPA1 HNRNPF AKAP8L RBMX

2.04e-05894369int:CAND1
InteractionMIR200C interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.05e-0591364int:MIR200C
InteractionPINK1 interactions

FLG UBAP2 DDX17 SF3B1 KHDRBS1 HNRNPA1 RBMX TLN1

2.09e-05679368int:PINK1
InteractionMIR155 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.14e-0592364int:MIR155
InteractionMIR128-1 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.14e-0592364int:MIR128-1
InteractionRCHY1 interactions

DDX17 SF3B1 KHDRBS1 HNRNPA1 HNRNPF RBMX

2.18e-05325366int:RCHY1
InteractionSSRP1 interactions

DDX17 SF3B1 ZFC3H1 KHDRBS1 RPA2 HNRNPA1 AKAP8L RBMX

2.23e-05685368int:SSRP1
InteractionMIR214 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.24e-0593364int:MIR214
InteractionMIR205 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.24e-0593364int:MIR205
InteractionMIR19B2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.33e-0594364int:MIR19B2
InteractionMIRLET7F1 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.33e-0594364int:MIRLET7F1
InteractionMIRLET7A2 interactions

FAM98A SF3B1 HNRNPA1 HNRNPF

2.53e-0596364int:MIRLET7A2
CytobandEnsembl 112 genes in cytogenetic band chr1p35

SDC3 KHDRBS1 RPA2

1.88e-04137373chr1p35
Cytoband19p13.12

PGLYRP2 AKAP8L

7.56e-045037219p13.12
Cytoband2q33.1

ALS2 SF3B1

7.86e-04513722q33.1
GeneFamilySignal transduction and activation of RNA metabolism family

KHDRBS3 KHDRBS1

5.96e-0632621275
GeneFamilyRNA binding motif containing

RBMXL1 HNRNPA1 HNRNPF RBMX

2.28e-04213264725
GeneFamilyProteasome

PSMB8 PSMB6

1.73e-0343262690
GeneFamilyPleckstrin homology domain containing|Rho guanine nucleotide exchange factors|C2 domain containing

ALS2 ABR

4.03e-0366262722
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HGABA

JPH1 SDC3 JPH4 ABR KHDRBS3 MUC2 TRIM9 SV2B JPH3

1.38e-051106369M39071
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

DDX17 SF3B1 RPA2 HNRNPA1 HNRNPF RBMX

1.40e-081983764c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCell10x5'v1-week_14-16-Hematopoietic-HSC/MPP_and_pro-eo/baso/mast_precursor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

ALS2 HNRNPA1 SV2B CD34

1.15e-0516937460fd3d06c5f61c1f021329d18b3bc605dda4af07
ToppCellHSPCs-LMPPs|World / Lineage and Cell class

PSMB8 PGLYRP2 HNRNPA1 CD34

1.57e-05183374e401f06843528a75693ce455bbeff2a98b8c24e5
ToppCellHSPCs-Mk_prog.|World / Lineage and Cell class

PSMB8 HNRNPA1 HNRNPF TLN1

1.98e-051943745049f4f102844d766eca577e809cf21f7908a9d2
ToppCell(1)_Dll4_loss-of-function|World / Stress and Cell class

PSMB8 RPA2 HNRNPA1 CD34

2.02e-05195374def4b2350e08a36ffddca71ea80ef611f2d437d9
ToppCell(1)_Dll4_loss-of-function-(0)_LMPP_(LSK_cells)|World / Stress and Cell class

PSMB8 RPA2 HNRNPA1 CD34

2.02e-05195374f11cf4b6855a26ff6ea572eebaad2aad6bb2434b
ToppCell10x5'v1-week_14-16-Lymphocytic_B-B_lineage-pro_B_progenitor|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

PSMB8 HNRNPA1 CD34 ACSS1

2.02e-05195374dc84a910b6f6eb9994cd683aa4fd813a82198e5f
ToppCellMegakaryocytic-erythropoietic-MEP|Megakaryocytic-erythropoietic / Lineage, cell class and subclass

KHDRBS1 HNRNPA1 CD34 RBMX

2.06e-05196374f90e7fe3a7b2fff30d01a25cc500876861c2e4f1
ToppCellMegakaryocytic-erythropoietic-MEP-MEP|Megakaryocytic-erythropoietic / Lineage, cell class and subclass

KHDRBS1 HNRNPA1 CD34 RBMX

2.06e-051963744e97010185fa9392da8f69e7b2a7395bf063f8ff
ToppCell10x5'v1-week_12-13-Lymphocytic_B-B_lineage|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

PSMB8 HNRNPA1 HNRNPF RBMX

2.19e-05199374ea75804c34989c99aab542e6d72617ed144819b6
ToppCell10x5'v1-week_12-13-Lymphocytic_B|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

PSMB8 HNRNPA1 HNRNPF RBMX

2.19e-05199374713dfd8552635645db5e0b5721c64e5c9b4aa06c
ToppCell10x5'v1-week_17-19-Lymphocytic_B-B_lineage|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

PSMB8 HNRNPA1 HNRNPF RBMX

2.23e-05200374c28d4ca51d2e2a3a22784ee251975f16a55b0297
ToppCell10x5'v1-week_17-19-Lymphocytic_B|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

PSMB8 HNRNPA1 HNRNPF RBMX

2.23e-05200374364f09eb9ae4913f5c80a29e943e1c0b2ffd5f93
ToppCellVE|World / Condition, Cell_class and T cell subcluster

PSMB8 DDX17 SF3B1 KHDRBS1

2.23e-052003748ae7cb81de3ffac5acdf3466d4b516d80cac95d3
ComputationalNeighborhood of CBFB

PSMB8 KHDRBS1 HNRNPF RBMX

7.06e-0730264GNF2_CBFB
ComputationalNeighborhood of HDAC1

PSMB8 SF3B1 KHDRBS1 HNRNPF RBMX

5.68e-06110265GNF2_HDAC1
ComputationalRNA splicing.

DDX17 KHDRBS1 HNRNPA1 HNRNPF

1.65e-0565264MODULE_183
ComputationalNeighborhood of DENR

KHDRBS1 HNRNPA1 RBMX

2.42e-0451263GNF2_DENR
ComputationalNeighborhood of FBL

KHDRBS1 HNRNPA1 HNRNPF RBMX

3.87e-04146264GNF2_FBL
ComputationalNeighborhood of RPA1

KHDRBS1 RBMX PSMB6

4.12e-0461263MORF_RPA1
ComputationalNeighborhood of KPNB1

KHDRBS1 HNRNPF RBMX

6.98e-0473263GNF2_KPNB1
ComputationalGenes in the cancer module 37.

SDC3 PGLYRP2 DDX17 SV2B AKAP8L TLN1

7.46e-04471266MODULE_37
ComputationalGenes in the cancer module 136.

SDC3 PGLYRP2 DDX17 SV2B AKAP8L TLN1

9.28e-04491266MODULE_136
ComputationalGenes in the cancer module 69.

SDC3 PGLYRP2 DDX17 SV2B AKAP8L TLN1

1.33e-03526266MODULE_69
ComputationalNeighborhood of APEX1

KHDRBS1 HNRNPA1 RBMX

1.37e-0392263GNF2_APEX1
ComputationalGenes in the cancer module 371.

KHDRBS1 RPA2

1.76e-0326262MODULE_371
ComputationalNeighborhood of SMC1L1

HNRNPF RBMX

1.90e-0327262GNF2_SMC1L1
ComputationalNeighborhood of PRKAG1

ABR KHDRBS1 RPA2 PSMB6

1.91e-03224264MORF_PRKAG1
ComputationalPhosphatase regulators.

KHDRBS1 RPA2

2.05e-0328262MODULE_281
ComputationalNeighborhood of RPA1

HNRNPF RBMX

2.05e-0328262GNF2_RPA1
ComputationalGenes in the cancer module 32.

KHDRBS1 HNRNPA1 HNRNPF RBMX

2.50e-03241264MODULE_32
ComputationalBlood cells and cancer expression clusters.

SDC3 PGLYRP2 SV2B AKAP8L TLN1

2.59e-03407265MODULE_532
ComputationalNeighborhood of DDB1

ABR KHDRBS1 RPA2 PSMB6

2.69e-03246264MORF_DDB1
ComputationalNeighborhood of DAP3

KHDRBS1 HNRNPA1 RBMX

2.86e-03119263GNF2_DAP3
ComputationalNeighborhood of EIF3S6

KHDRBS1 HNRNPA1 RBMX

3.07e-03122263MORF_EIF3S6
ComputationalGenes in the cancer module 459.

SDC3 PGLYRP2 SV2B AKAP8L TLN1

3.31e-03431265MODULE_459
ComputationalNeighborhood of ANP32B

KHDRBS1 HNRNPA1

3.37e-0336262GCM_ANP32B
ComputationalGenes in the cancer module 378.

SDC3 PGLYRP2 SV2B AKAP8L TLN1

3.45e-03435265MODULE_378
ComputationalNeighborhood of RAD21

KHDRBS1 HNRNPA1

3.56e-0337262GCM_RAD21
ComputationalGenes in the cancer module 317.

SDC3 PGLYRP2 SV2B AKAP8L TLN1

3.62e-03440265MODULE_317
ComputationalGenes in the cancer module 255.

SDC3 PGLYRP2 SV2B AKAP8L TLN1

3.99e-03450265MODULE_255
ComputationalNeighborhood of EIF4A2

DDX17 KHDRBS1 HNRNPA1

4.34e-03138263MORF_EIF4A2
ComputationalNeighborhood of FBL

KHDRBS1 HNRNPA1 RBMX

4.52e-03140263MORF_FBL
ComputationalBlood cells and cancer expression cancer.

SDC3 PGLYRP2 SV2B AKAP8L TLN1

4.72e-03468265MODULE_179
ComputationalNeighborhood of RAF1

KHDRBS1 HNRNPA1

4.78e-0343262GCM_RAF1
ComputationalNeighborhood of UBE2I

KHDRBS1 HNRNPF

5.00e-0344262GNF2_UBE2I
ComputationalNeighborhood of ELAC2

HNRNPF RBMX

5.45e-0346262GNF2_ELAC2
ComputationalGenes in the cancer module 198.

DDX17 KHDRBS1 RPA2 HNRNPF

5.67e-03303264MODULE_198
ComputationalNeighborhood of USP5

RPA2 PSMB6

6.93e-0352262MORF_USP5
Drug7-chloro-DL-tryptophan

KHDRBS3 KHDRBS1 HNRNPA1 AKAP8L

6.23e-0676364CID000643956
DrugAC1NRA5C

DDX17 KHDRBS1 HNRNPA1 HNRNPF RBMX

7.66e-06174365CID005287709
Diseasecardiomyopathy (implicated_via_orthology)

JPH1 JPH2 JPH4 JPH3

1.71e-0671364DOID:0050700 (implicated_via_orthology)
DiseaseDrug-induced agranulocytosis, response to clozapine

FAM171A1 JPH2

1.21e-0342362GO_0097338, HP_0012235
Diseasepneumonia

FAM171A1 MUC2

1.51e-0347362EFO_0003106
Diseasedepressive symptom measurement, stressful life event measurement

FAM171A1 DSE

1.71e-0350362EFO_0007006, EFO_0007781
Diseasefacial morphology

FAM171A1 JPH3

2.06e-0355362EFO_0004743

Protein segments in the cluster

PeptideGeneStartEntry
NFSYGTDEYDGEGNE

ABR

21

Q12979
TGDGAYRTEGGYYQI

ACSS1

531

Q9NUB1
GQGVYSYASGEVFEG

ALS2

1111

Q96Q42
HGSYGSADYDYGESG

FLG

3976

P20930
QGGVYGSGGERYDSY

AKAP8L

111

Q9ULX6
PSGGSYRDSYESYGN

RBMX

276

P38159
AESGTQGYESFSYGG

RBSN

71

Q9H1K0
QGYGNYVTYGSEASA

IRX4

81

P78413
IGGSGSSYIYGYVDA

PSMB6

161

P28072
GSGNTYAYGVMDSGY

PSMB8

201

P28062
GYESSGNDDYRGSYN

FAM171A1

476

Q5VUB5
DGYGTETYADGGTYQ

JPH2

116

Q9BR39
DGYGTETYSDGGTYQ

JPH4

116

Q96JJ6
DGYGVETYGDGGTYQ

JPH1

116

Q9HDC5
GEEVYNGTYGDTCYF

MUC2

4346

Q02817
GYSFVVGSDGYVYEG

PGLYRP2

446

Q96PD5
TDGSLYEGVAYGSYT

DSE

251

Q9UL01
EGYEGYYSQSQGDSE

KHDRBS1

381

Q07666
QSGADYYDYGHGLSE

KHDRBS3

296

O75525
LDYGCSYGSEYGNSG

KRTAP22-2

11

Q3LI68
GQGTYGAAAYGTSSY

DDX17

636

Q92841
GTSSYTAQEYGAGTY

DDX17

646

Q92841
DDLYSGSGSGYFEQE

SDC3

76

O75056
EDPYYTENGGGQGYS

CD34

326

P28906
YSTGYGGYEEYSGLS

HNRNPF

236

P52597
PSGGSYRDSYESYGN

RBMXL1

276

Q96E39
GGYAPSDGYYRGNES

SV2B

11

Q7L1I2
SYTGSGYQGGGYQQD

FAM98A

431

Q8NCA5
DNTGYVSGYKGSGTY

TPPP2

151

P59282
SGYGQHGYSTGYDDL

UBAP2

956

Q5T6F2
FESYGSSSYGGAGGY

RPA2

6

P15927
TGYYDQEIYGGSDSR

SF3B1

36

O75533
GDYQDGYYSVQTTEG

TLN1

371

Q9Y490
YSEADSGYGSYGGFA

TRIM9

71

Q9C026
YTDGEGYTDGEGGPY

TJP3

816

O95049
NQGSGYGGSGSYDSY

HNRNPA1

276

P09651
TDSGGGIYQYDNYEE

ZFC3H1

516

O60293
QDGYGTETYSDGGTY

JPH3

116

Q8WXH2