Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionacetylspermidine deacetylase activity

HDAC6 HDAC10

1.01e-052642GO:0047611
GeneOntologyBiologicalProcessspermidine deacetylation

HDAC6 HDAC10

9.48e-062642GO:0106048
GeneOntologyBiologicalProcesspolyamine deacetylation

HDAC6 HDAC10

9.48e-062642GO:0106047
GeneOntologyBiologicalProcesspositive regulation of synaptic transmission, glutamatergic

RELN HDAC6 EGFR GLUL

9.50e-0643644GO:0051968
GeneOntologyBiologicalProcesspositive regulation of DNA metabolic process

UBE2B WIZ EGFR UBE2V2 SMARCA2 INO80 HDAC10

7.57e-05333647GO:0051054
GeneOntologyBiologicalProcesspositive regulation of DNA repair

EGFR UBE2V2 SMARCA2 INO80 HDAC10

8.19e-05143645GO:0045739
GeneOntologyBiologicalProcessregulation of bile acid secretion

CES1 ABCB11

1.41e-046642GO:0120188
GeneOntologyBiologicalProcessanatomical structure formation involved in morphogenesis

RELN COL12A1 SLC24A4 NEBL CLASP1 GLUL LRP2 RNF213 SALL4 PLCD1 FUT1 DYSF ENPEP EPHA1

1.47e-0414836414GO:0048646
GeneOntologyBiologicalProcessresponse to UV

UBE2A UBE2B EGFR INO80 CERS1

1.70e-04167645GO:0009411
GeneOntologyBiologicalProcessregulation of synaptic transmission, glutamatergic

RELN HDAC6 EGFR GLUL

1.92e-0492644GO:0051966
GeneOntologyBiologicalProcesspositive regulation of nuclear cell cycle DNA replication

WIZ INO80

1.97e-047642GO:0010571
GeneOntologyBiologicalProcessnegative regulation of microtubule depolymerization

HDAC6 CLASP1 DYSF

2.22e-0438643GO:0007026
GeneOntologyBiologicalProcesspostreplication repair

UBE2A UBE2B UBE2V2

2.22e-0438643GO:0006301
GeneOntologyBiologicalProcessprotein polyubiquitination

UBE2A UBE2B HDAC6 UBE2V2 RNF213 DYSF

2.72e-04289646GO:0000209
GeneOntologyBiologicalProcessregulation of microtubule depolymerization

HDAC6 CLASP1 DYSF

3.00e-0442643GO:0031114
GeneOntologyBiologicalProcesscarbon catabolite regulation of transcription from RNA polymerase II promoter

SIK2 NCOA1

3.36e-049642GO:0000429
GeneOntologyBiologicalProcessspermidine metabolic process

HDAC6 HDAC10

3.36e-049642GO:0008216
GeneOntologyBiologicalProcessregulation of DNA metabolic process

UBE2B WIZ EGFR UBE2V2 SMARCA2 INO80 CERS1 HDAC10

3.42e-04564648GO:0051052
GeneOntologyBiologicalProcessregulation of autophagy of mitochondrion

UBE2A HDAC6 CERS1

3.68e-0445643GO:1903146
GeneOntologyBiologicalProcesscellular catabolic process

TRHDE ERFE UBE2A HDAC6 CES1 GLUL ABCB11 RNF213 CERS1 HDAC10 ENPEP PLBD2

4.15e-0412536412GO:0044248
GeneOntologyBiologicalProcesscarbon catabolite regulation of transcription

SIK2 NCOA1

4.20e-0410642GO:0045990
GeneOntologyCellularComponentubiquitin conjugating enzyme complex

UBE2A UBE2B UBE2V2

2.27e-069643GO:0031371
GeneOntologyCellularComponentHULC complex

UBE2A UBE2B

5.51e-054642GO:0033503
DomainUQ_con

UBE2A UBE2B UBE2V2

2.92e-0439623PF00179
DomainERAP1-like_C_dom

TRHDE ENPEP

3.00e-048622IPR024571
DomainERAP1_C

TRHDE ENPEP

3.00e-048622PF11838
DomainZINC_PROTEASE

TRHDE MMP24 ADAM21 ENPEP

3.15e-0498624PS00142
DomainUBIQUITIN_CONJUGAT_1

UBE2A UBE2B UBE2V2

3.15e-0440623PS00183
DomainUBQ-conjugat_E2

UBE2A UBE2B UBE2V2

3.39e-0441623IPR000608
DomainUBIQUITIN_CONJUGAT_2

UBE2A UBE2B UBE2V2

3.39e-0441623PS50127
DomainHist_deacetyl

HDAC6 HDAC10

5.85e-0411622PF00850
DomainHis_deacetylse_dom

HDAC6 HDAC10

5.85e-0411622IPR023801
Domain-

HDAC6 HDAC10

5.85e-04116223.40.800.20
DomainHis_deacetylse

HDAC6 HDAC10

5.85e-0411622IPR000286
Domain-

UBE2A UBE2B UBE2V2

6.48e-04516233.10.110.10
DomainPeptidase_M1

TRHDE ENPEP

7.00e-0412622IPR001930
DomainUBQ-conjugating_enzyme/RWD

UBE2A UBE2B UBE2V2

7.25e-0453623IPR016135
DomainPeptidase_M1

TRHDE ENPEP

8.26e-0413622PF01433
DomainPeptidase_M1_N

TRHDE ENPEP

8.26e-0413622IPR014782
DomainVWA

COL12A1 COL6A6 VWA8

8.52e-0456623PF00092
DomainATPase_dyneun-rel_AAA

DNAH10 VWA8

9.62e-0414622IPR011704
DomainAAA_5

DNAH10 VWA8

9.62e-0414622PF07728
DomainAAA+_ATPase

DNAH10 VWA8 ABCB11 RNF213

1.34e-03144624IPR003593
DomainAAA

DNAH10 VWA8 ABCB11 RNF213

1.34e-03144624SM00382
Domainfn3

LRFN1 COL12A1 ANKFN1 EPHA1

2.06e-03162624PF00041
DomainVWFA

COL12A1 COL6A6 VWA8

2.56e-0382623PS50234
DomainVWA

COL12A1 COL6A6 VWA8

2.74e-0384623SM00327
DomainUBQ-conjugating_AS

UBE2A UBE2B

3.10e-0325622IPR023313
DomainFN3

LRFN1 COL12A1 ANKFN1 EPHA1

3.32e-03185624SM00060
DomainFN3

LRFN1 COL12A1 ANKFN1 EPHA1

4.31e-03199624PS50853
DomainVWF_A

COL12A1 COL6A6 VWA8

4.36e-0399623IPR002035
DomainSNF2_N

SMARCA2 INO80

5.04e-0332622IPR000330
DomainSNF2_N

SMARCA2 INO80

5.04e-0332622PF00176
DomainFN3_dom

LRFN1 COL12A1 ANKFN1 EPHA1

5.12e-03209624IPR003961
DomainCYSTEINE_SWITCH

MMP24 ADAM21

8.18e-0341622PS00546
DomainPept_M10_metallopeptidase

MMP24 ADAM21

8.97e-0343622IPR001818
DomainC2

SYTL4 PLCD1 DYSF

9.44e-03131623PF00168
Pubmed

Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers.

MMP24 UBE2A UBE2B DNAH10 EGFR TRPM3 CES1 ADAM21 SMARCA2 LRP2 CPD

8.75e-08730641134857952
Pubmed

The ubiquitin-conjugating DNA repair enzyme HR6A is a maternal factor essential for early embryonic development in mice.

UBE2A UBE2B

3.33e-06264215169909
Pubmed

Loss of HR6B ubiquitin-conjugating activity results in damaged synaptonemal complex structure and increased crossing-over frequency during the male meiotic prophase.

UBE2A UBE2B

3.33e-06264212556476
Pubmed

Structural and functional conservation of two human homologs of the yeast DNA repair gene RAD6.

UBE2A UBE2B

3.33e-0626421717990
Pubmed

Localization of two human homologs, HHR6A and HHR6B, of the yeast DNA repair gene RAD6 to chromosomes Xq24-q25 and 5q23-q31.

UBE2A UBE2B

3.33e-0626421559696
Pubmed

Isolation and characterization of mammalian HDAC10, a novel histone deacetylase.

HDAC6 HDAC10

3.33e-06264211677242
Pubmed

The NMR structure of the class I human ubiquitin-conjugating enzyme 2b.

UBE2A UBE2B

3.33e-06264211885984
Pubmed

HDAC6 sustains growth stimulation by prolonging the activation of EGF receptor through the inhibition of rabaptin-5-mediated early endosome fusion in gastric cancer.

HDAC6 EGFR

3.33e-06264225111897
Pubmed

HDAC6-mediated EGFR stabilization and activation restrict cell response to sorafenib in non-small cell lung cancer cells.

HDAC6 EGFR

3.33e-06264227090797
Pubmed

The microtubule-associated histone deacetylase 6 (HDAC6) regulates epidermal growth factor receptor (EGFR) endocytic trafficking and degradation.

HDAC6 EGFR

3.33e-06264220133936
Pubmed

Alternative Splicing of RAD6B and Not RAD6A is Selectively Increased in Melanoma: Identification and Functional Characterization.

UBE2A UBE2B

3.33e-06264231683936
Pubmed

High-resolution maps of the murine Chromosome 2 region containing the cholesterol gallstone locus, Lith1.

LRP2 ABCB11

3.33e-06264210556425
Pubmed

RAD6 promotes DNA repair and stem cell signaling in ovarian cancer and is a promising therapeutic target to prevent and treat acquired chemoresistance.

UBE2A UBE2B

3.33e-06264228806395
Pubmed

Histone deacetylase 10 structure and molecular function as a polyamine deacetylase.

HDAC6 HDAC10

3.33e-06264228516954
Pubmed

New Insights into the RNA-Binding and E3 Ubiquitin Ligase Activities of Roquins.

UBE2A UBE2B UBE2V2

3.97e-061764326489670
Pubmed

Linkage of Nat and Es-1 in the mouse and development of strains congenic for N-acetyltransferase.

NAT1 CES1

9.99e-0636423209851
Pubmed

The human RAD18 gene product interacts with HHR6A and HHR6B.

UBE2A UBE2B

9.99e-06364210908344
Pubmed

Identification of HDAC10, a novel class II human histone deacetylase containing a leucine-rich domain.

HDAC6 HDAC10

9.99e-06364211861901
Pubmed

Enhanced genomic instability and defective postreplication repair in RAD18 knockout mouse embryonic stem cells.

UBE2A UBE2B

9.99e-06364212509447
Pubmed

UBE2A and UBE2B are recruited by an atypical E3 ligase module in UBR4.

UBE2A UBE2B

9.99e-06364238182926
Pubmed

Dysfunction of human Rad18 results in defective postreplication repair and hypersensitivity to multiple mutagens.

UBE2A UBE2B

9.99e-06364210884424
Pubmed

RNF168 forms a functional complex with RAD6 during the DNA damage response.

UBE2A UBE2B

9.99e-06364223525009
Pubmed

Faster regeneration associated to high expression of Fam65b and Hdac6 in dysferlin-deficient mouse.

HDAC6 DYSF

9.99e-06364231218594
Pubmed

HDAC6 regulates epidermal growth factor receptor (EGFR) endocytic trafficking and degradation in renal epithelial cells.

HDAC6 EGFR

9.99e-06364223152903
Pubmed

Large-scale proteomics and phosphoproteomics of urinary exosomes.

MMP24 WIZ NEBL GLUL LRP2 ABCB11 PLCD1 CFAP70 DYSF ENPEP

1.57e-051016641019056867
Pubmed

A conserved RAD6-MDM2 ubiquitin ligase machinery targets histone chaperone ASF1A in tumorigenesis.

UBE2A UBE2B

2.00e-05464226336826
Pubmed

ZNF198 protein, involved in rearrangement in myeloproliferative disease, forms complexes with the DNA repair-associated HHR6A/6B and RAD18 proteins.

UBE2A UBE2B

2.00e-05464212776193
Pubmed

EGF-induced sodium influx regulates EGFR trafficking through HDAC6 and tubulin acetylation.

HDAC6 EGFR

2.00e-05464226382850
Pubmed

Rad6 overexpression induces multinucleation, centrosome amplification, abnormal mitosis, aneuploidy, and transformation.

UBE2A UBE2B

2.00e-05464211929833
Pubmed

RAD6 promotes homologous recombination repair by activating the autophagy-mediated degradation of heterochromatin protein HP1.

UBE2A UBE2B

2.00e-05464225384975
Pubmed

Gender-associated expression of tumor markers and a small gene set in breast carcinoma.

NAT1 EGFR

2.00e-05464224656773
Pubmed

RAD6 regulates the dosage of p53 by a combination of transcriptional and posttranscriptional mechanisms.

UBE2A UBE2B

2.00e-05464222083959
Pubmed

Mutations of Rad6 E2 ubiquitin-conjugating enzymes at alanine-126 in helix-3 affect ubiquitination activity and decrease enzyme stability.

UBE2A UBE2B

2.00e-05464236162503
Pubmed

A cascading activity-based probe sequentially targets E1-E2-E3 ubiquitin enzymes.

UBE2A UBE2B HDAC6 UBE2V2

2.16e-058864427182664
Pubmed

Rad18 guides poleta to replication stalling sites through physical interaction and PCNA monoubiquitination.

UBE2A UBE2B

3.32e-05564215359278
Pubmed

The mouse homolog to the ras-related yeast gene YPT1 maps on chromosome 11 close to the wobbler (wr) locus.

EGFR GLUL

3.32e-0556421643310
Pubmed

Deactylase inhibitors disrupt cellular complexes containing protein phosphatases and deacetylases.

HDAC6 HDAC10

3.32e-05564214670976
Pubmed

Fam65b is important for formation of the HDAC6-dysferlin protein complex during myogenic cell differentiation.

HDAC6 DYSF

3.32e-05564224687993
Pubmed

Recognition of forked and single-stranded DNA structures by human RAD18 complexed with RAD6B protein triggers its recruitment to stalled replication forks.

UBE2A UBE2B

3.32e-05564218363965
Pubmed

Ubiquitin ligase Rad18Sc localizes to the XY body and to other chromosomal regions that are unpaired and transcriptionally silenced during male meiotic prophase.

UBE2A UBE2B

4.98e-05664215383616
Pubmed

NBS1 recruits RAD18 via a RAD6-like domain and regulates Pol η-dependent translesion DNA synthesis.

UBE2A UBE2B

4.98e-05664221884979
Pubmed

Role of E2-RING Interactions in Governing RNF4-Mediated Substrate Ubiquitination.

UBE2A UBE2B

4.98e-05664227678051
Pubmed

Human SHPRH is a ubiquitin ligase for Mms2-Ubc13-dependent polyubiquitylation of proliferating cell nuclear antigen.

UBE2A UBE2V2

4.98e-05664217108083
Pubmed

Human RAD18 interacts with ubiquitylated chromatin components and facilitates RAD9 recruitment to DNA double strand breaks.

UBE2A UBE2B

4.98e-05664221858012
Pubmed

Activation of ATP-binding cassette transporter A1 transcription by chromatin remodeling complex.

SMARCA2 NCOA1

4.98e-05664215774904
Pubmed

Biochemical and genetic studies of UBR3, a ubiquitin ligase with a function in olfactory and other sensory systems.

UBE2A UBE2B

4.98e-05664217462990
Pubmed

Cooperation of HECT-domain ubiquitin ligase hHYD and DNA topoisomerase II-binding protein for DNA damage response.

UBE2A UBE2B

6.96e-05764211714696
Pubmed

Alternative ubiquitin activation/conjugation cascades interact with N-end rule ubiquitin ligases to control degradation of RGS proteins.

UBE2A UBE2B

6.96e-05764221816346
Pubmed

Silencing of unpaired chromatin and histone H2A ubiquitination in mammalian meiosis.

UBE2A UBE2B

6.96e-05764215657431
Pubmed

Cellular energy depletion resets whole-body energy by promoting coactivator-mediated dietary fuel absorption.

ABCB11 NCOA1

6.96e-05764221195347
Pubmed

A new mutation Rim3 resembling Re(den) is mapped close to retinoic acid receptor alpha (Rara) gene on mouse chromosome 11.

NCOA1 GSDMA

6.96e-0576429434940
Pubmed

Nucleosomal H2B ubiquitylation with purified factors.

UBE2A UBE2B

9.27e-05864221443952
Pubmed

Neuregulin repellent signaling via ErbB4 restricts GABAergic interneurons to migratory paths from ganglionic eminence to cortical destinations.

RELN EGFR

9.27e-05864222376909
Pubmed

Regulation of Connexin32 by ephrin receptors and T-cell protein-tyrosine phosphatase.

EGFR EPHA1

9.27e-05864230401746
Pubmed

En bloc transfer of polyubiquitin chains to PCNA in vitro is mediated by two different human E2-E3 pairs.

UBE2A UBE2V2

9.27e-05864222904075
Pubmed

The bZIP repressor proteins, c-Jun dimerization protein 2 and activating transcription factor 3, recruit multiple HDAC members to the ATF3 promoter.

HDAC6 HDAC10

1.19e-04964222989952
Pubmed

A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.

TRHDE EGFR TRPM3 GLUL ALDH7A1 EPHA1

1.24e-0442064628065597
Pubmed

Wnt signaling mutants have decreased dentate granule cell production and radial glial scaffolding abnormalities.

RELN EPHA1

1.49e-041064214715945
Pubmed

Mechanistic insights into nucleosomal H2B monoubiquitylation mediated by yeast Bre1-Rad6 and its human homolog RNF20/RNF40-hRAD6A.

UBE2A UBE2B

1.49e-041064237633270
Pubmed

Histone Deacetylase 1 Is Essential for Rod Photoreceptor Differentiation by Regulating Acetylation at Histone H3 Lysine 9 and Histone H4 Lysine 12 in the Mouse Retina.

HDAC6 HDAC10

1.49e-041064228028172
Pubmed

Knockout mouse model and gametogenic failure.

UBE2A UBE2B

1.49e-04106429922113
Pubmed

A forward genetic screen in mice identifies mutants with abnormal cortical patterning.

RELN LRP2

1.81e-041164223968836
Pubmed

Diacylglycerol kinase delta regulates protein kinase C and epidermal growth factor receptor signaling.

EGFR DGKG

1.81e-041164217021016
Pubmed

The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.

HDAC6 SMARCA2 INO80 HDAC10

2.06e-0415764430186101
Pubmed

Organization and evolutionary relatedness of OR37 olfactory receptor genes in mouse and human.

OR13C5 OR13C2

2.17e-041264212906860
Pubmed

Role of the postnatal radial glial scaffold for the development of the dentate gyrus as revealed by Reelin signaling mutant mice.

RELN GLUL

2.17e-041264223828756
Pubmed

Hepatitis B Virus HBx Protein Mediates the Degradation of Host Restriction Factors through the Cullin 4 DDB1 E3 Ubiquitin Ligase Complex.

EGFR SMARCA2 RNF213 GSDMA ALDH7A1

2.47e-0430464532235678
Pubmed

Control of astrocyte progenitor specification, migration and maturation by Nkx6.1 homeodomain transcription factor.

RELN GLUL

2.57e-041364225285789
Pubmed

Multifaceted actions of Zeb2 in postnatal neurogenesis from the ventricular-subventricular zone to the olfactory bulb.

RELN EGFR

2.57e-041364232253238
Pubmed

Histone deacetylase expression patterns in developing murine optic nerve.

HDAC6 HDAC10

2.99e-041464225011550
Pubmed

Localization of sequences related to the human RAD6 DNA repair gene on mouse chromosomes 11 and 13.

UBE2B EGFR

2.99e-04146427613042
Pubmed

Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression.

TINAGL1 RELN COL12A1 COL6A6

3.11e-0417564428071719
Pubmed

Ubc13-Mms2 cooperates with a family of RING E3 proteins in budding yeast membrane protein sorting.

UBE2B UBE2V2

3.45e-041564232265276
Pubmed

A fluorescent perilipin 2 knock-in mouse model reveals a high abundance of lipid droplets in the developing and adult brain.

EGFR GLUL

3.45e-041564238942786
Pubmed

Identification and characterization of microRNAs expressed in the mouse eye.

TRPM3 GLUL

3.93e-041664217251443
Pubmed

Brg1-dependent chromatin remodelling is not essentially required during oligodendroglial differentiation.

GLUL SMARCA2

3.93e-041664225568100
Pubmed

Functional genomics identifies a mechanism for estrogen activation of the retinoic acid receptor alpha1 gene in breast cancer cells.

HDAC6 NCOA1

3.93e-041664215831516
Pubmed

Functional interaction of ubiquitin ligase RNF167 with UBE2D1 and UBE2N promotes ubiquitination of AMPA receptor.

UBE2A UBE2B

4.45e-041764233650289
Pubmed

Elucidation of ubiquitin-conjugating enzymes that interact with RBR-type ubiquitin ligases using a liquid-liquid phase separation-based method.

UBE2A UBE2B

4.45e-041764236563856
Pubmed

Screening and association testing of common coding variation in steroid hormone receptor co-activator and co-repressor genes in relation to breast cancer risk: the Multiethnic Cohort.

SMARCA2 NCOA1

4.45e-041764219183483
Pubmed

Interaction network of human early embryonic transcription factors.

ZNF536 WIZ SMARCA2 NCOA1 INO80

4.76e-0435164538297188
Pubmed

Regulation of epidermal growth factor receptor trafficking by lysine deacetylase HDAC6.

HDAC6 EGFR UBE2V2

4.92e-048364320029029
Pubmed

Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.

ZNF536 WIZ SMARCA2

4.92e-048364328794006
Pubmed

HDAC family: What are the cancer relevant targets?

HDAC6 HDAC10

5.00e-041864218824292
Pubmed

Ablation of BAF170 in Developing and Postnatal Dentate Gyrus Affects Neural Stem Cell Proliferation, Differentiation, and Learning.

GLUL SMARCA2

5.00e-041864227392482
Pubmed

RAD6-Mediated transcription-coupled H2B ubiquitylation directly stimulates H3K4 methylation in human cells.

UBE2A UBE2B

5.00e-041864219410543
Pubmed

Nuclear Shp2 directs normal embryo implantation via facilitating the ERα tyrosine phosphorylation by the Src kinase.

EGFR NCOA1

5.59e-041964228424251
Pubmed

Synthesis of Isomeric Phosphoubiquitin Chains Reveals that Phosphorylation Controls Deubiquitinase Activity and Specificity.

UBE2A UBE2B

5.59e-041964227425610
Pubmed

Defining the human C2H2 zinc finger degrome targeted by thalidomide analogs through CRBN.

WIZ SALL4

5.59e-041964230385546
Pubmed

Diet1 functions in the FGF15/19 enterohepatic signaling axis to modulate bile acid and lipid levels.

NEBL ABCB11

6.84e-042164223747249
Pubmed

Characterization of 458 single nucleotide polymorphisms of disease candidate genes in the Korean population.

EGFR LRP2

7.52e-042264212768436
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

RELN EHBP1L1 HDAC6 WIZ CLASP1 VWA8 INO80 NDUFS2

8.09e-04108264838697112
Pubmed

Nanog and Oct4 associate with unique transcriptional repression complexes in embryonic stem cells.

SMARCA2 SALL4

8.96e-042464218454139
Pubmed

Phosphorylation of Parkin at Serine65 is essential for activation: elaboration of a Miro1 substrate-based assay of Parkin E3 ligase activity.

UBE2A UBE2B

8.96e-042464224647965
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

TINAGL1 EHBP1L1 LRFN1 WIZ VWA8 INO80 FUT1 DYSF

9.27e-04110564835748872
Pubmed

Identification of tyrosine kinases expressed in the male mouse gubernaculum during development.

EGFR EPHA1

9.73e-042564215254900
Pubmed

Dual E1 activation systems for ubiquitin differentially regulate E2 enzyme charging.

UBE2A UBE2B

9.73e-042564217597759
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

ZNF536 HDAC6 WIZ VWA8 SMARCA2 LRP2 RNF213 INO80

9.88e-04111664831753913
Pubmed

The E2 ubiquitin-conjugating enzymes direct polyubiquitination to preferred lysines.

UBE2A UBE2B

1.05e-032664220061386
Pubmed

Irisin Mediates Effects on Bone and Fat via αV Integrin Receptors.

TINAGL1 HDAC6 EGFR VWA8 GLUL RNF213 CPD PLBD2 NDUFS2

1.30e-03145164930550785
InteractionCD59 interactions

TINAGL1 UBE2A HDAC6 EGFR SIK2

7.96e-0692605int:CD59
InteractionEGR2 interactions

ZNF536 WIZ SMARCA2 NCOA1 INO80 NDUFS2

1.17e-05171606int:EGR2
GeneFamilyProtein phosphatase 1 regulatory subunits|Histone deacetylases, class IIB

HDAC6 HDAC10

6.33e-062462993
GeneFamilyUbiquitin conjugating enzymes E2

UBE2A UBE2B UBE2V2

1.54e-0441463102
GeneFamilyFibronectin type III domain containing

LRFN1 COL12A1 ANKFN1 EPHA1

7.22e-04160464555
GeneFamilyOlfactory receptors, family 13

OR13C5 OR13C2

1.55e-0323462162
GeneFamilyCollagens

COL12A1 COL6A6

6.10e-0346462490
CoexpressionAtlaskidney_P0_JuxtaGlom_Ren1_top-relative-expression-ranked_100

TINAGL1 RELN COL12A1 LRP2 ENPEP

5.11e-0687615gudmap_kidney_P0_JuxtaGlom_Ren1_100
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-thymocyte|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE RELN COL12A1 DNAH10 TRPM3 LRP2 SALL4

8.71e-091846472cbed6462fea2622871bb7e49b0df3d984239281
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE RELN COL12A1 DNAH10 TRPM3 LRP2 SALL4

8.71e-09184647ea7a7e2bac46d4d2c31a5d576b38a032b5335062
ToppCellfacs-Thymus-Thymus_Epithelium-18m-Lymphocytic-proliferating_thymocyte;_DN_to_DP_transition,_dividing_(some_are_Cd8+/_Cd4+,_some_undergoing_VDJ_recombination)|Thymus / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE RELN COL12A1 DNAH10 TRPM3 LRP2 SALL4

8.71e-091846472b19a8c5f823e00812908b23e66bb4e563278aff
ToppCellPrimary_Motor_Cortex_(M1)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L2-6_VIP_VIP|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN COL12A1 SLC24A4 EGFR SYTL4

2.33e-07180646c6030e725e3d86d5d74a1676330c77ffeceb324f
ToppCell(5)_Fibroblasts-(5)_Fibroblast-G|(5)_Fibroblasts / Lung cell shreds - cell class (v4) and cell subclass (v4)

NEBL COL6A6 CES1 ENPEP EPHA1 SPX

3.96e-07197646a21a710c824f9e5c7ef1674168d1ce5aef85bd35
ToppCell343B-Fibroblasts-Fibroblast-G|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

NEBL COL6A6 CES1 GLUL ENPEP EPHA1

4.20e-07199646212e89d097753790061310373a1fafba773488b6
ToppCell343B-Fibroblasts-Fibroblast-G-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

NEBL COL6A6 CES1 GLUL ENPEP EPHA1

4.20e-0719964614b676aa289c0578a37be32cec3ea285c79d97cc
ToppCellTCGA-Kidney|World / Sample_Type by Project: Shred V9

TRHDE TRPM3 LRP2 ENPEP SPX

2.59e-06151645e31974c0d0a0c644205a0ee6013ab74a09d8a306
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TRHDE COL12A1 EGFR LRP2 SPX

3.88e-06164645382e42701779d12a7948690b3be72d06dd75c8b4
ToppCell343B-Lymphocytic-NK_cells-NK_cell_E|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

CLASP1 SIK2 TOP6BL PLBD2 PNPO

5.18e-06174645a1f745962a104c6f4b86b7e482da8755384c773a
ToppCellFetal_29-31_weeks-Mesenchymal-vascular_smooth_muscle_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

TINAGL1 ERFE COL12A1 DGKG ENPEP

5.18e-06174645015d3742d3d79a57413a333f00ef2d380a9848dd
ToppCellfacs-Lung-Endomucin_-18m-Endothelial-Lymphatic_endothelial_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LCA5 RELN DNAH10 GSDMA DYSF

5.32e-061756450801cccec6915aefc135262fc74580280fd51aa5
ToppCellfacs-Lung-Endomucin_-18m-Endothelial-endothelial_cell_of_lymphatic_vessel|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LCA5 RELN DNAH10 GSDMA DYSF

5.32e-0617564509163e7030f76d706eccabdb1d5ec45f8412aa75
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L2-6_VIP_VIP|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN COL12A1 EGFR SYTL4

5.94e-0617964501302505816f272243659e20d751b61a198a2fc0
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_1-Inh_L1_SST_CXCL14|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN EGFR PEG10 ANKFN1

6.11e-06180645b6efdb4d319ef6f87f559acd974e5a71b06a2322
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L1-3_VIP_ZNF322P1|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN SLC24A4 EGFR ABCB11

6.27e-06181645062f00736eed96e4f4327615d093558dd7d82b20
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_1-Inh_L1_ADARB2_ADAM33|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN COL12A1 EGFR ANKFN1

6.97e-06185645487fa382232564f075960899d50afa0edae5d258
ToppCell21-Trachea-Epithelial-Intermediate_ciliated|Trachea / Age, Tissue, Lineage and Cell class

DNAH10 CES1 CFAP70 CFAP161 ANKFN1

7.35e-061876451a2178a195d078d1963947b327c6d0d4f2f48341
ToppCellMesenchymal-vascular_smooth_muscle_cell|World / Lineage, Cell type, age group and donor

TINAGL1 COL12A1 DGKG ENPEP KCNT1

8.14e-06191645fd89fbc62aa1c73e0f659991e3bd726a0c97bd68
ToppCellPCW_07-8.5-Mesenchymal-Mesenchymal_fibroblastic-mes_adventitial_fibro_(10)|PCW_07-8.5 / Celltypes from embryonic and fetal-stage human lung

TINAGL1 RELN COL12A1 COL6A6 ENPEP

8.56e-06193645cd45118ced91b10baed3b1068d4673ec99824b86
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

TRHDE NEBL TRPM3 LRP2 ENPEP

8.56e-0619364582e8a4c40299ffcdfd5a0da711bb9de6fb8a2eaa
ToppCell368C-Fibroblasts-Fibroblast-G-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

NEBL CES1 ENPEP EPHA1 SPX

8.78e-06194645d9eec28fa7b255c0ec023276dd955f1e276e7159
ToppCell368C-Fibroblasts-Fibroblast-G|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

NEBL CES1 ENPEP EPHA1 SPX

8.78e-06194645e4d7e9709ce42d4610e44d3445927eefbcbb9eff
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-1M|organoid_Kanton_Nature / Sample Type, Dataset, Time_group, and Cell type.

TRPM3 GLUL LRP2 SALL4 ALDH7A1

9.23e-061966451e9ccbd5be7839a74108f0cd07a6d2d736bc7f1b
ToppCellCOVID-19-lung-Macrophage_VCANhi_FCN1hi|lung / Disease (COVID-19 only), tissue and cell type

EHBP1L1 SLC24A4 GLUL RNF213 DYSF

9.46e-06197645a0f8a992282a6d64890f5574c7c9741fcb38dadd
ToppCellCOVID-19-lung-Macrophage_VCANhi_FCN1hi|COVID-19 / Disease (COVID-19 only), tissue and cell type

EHBP1L1 SLC24A4 GLUL RNF213 DYSF

9.69e-06198645ea34096bee852a7e996f097fa279381afa8f86ff
ToppCell3'-GW_trimst-2-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL12A1 COL6A6 PEG10 SMARCA2 ENPEP

9.93e-061996459846d6a31635fde759d55674631c11ab9270a603
ToppCell5'-GW_trimst-1.5-SmallIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

RELN COL12A1 COL6A6 PEG10 ENPEP

9.93e-0619964583383d9ae4f501754fd3da0215ce6f0e3c70562c
ToppCellTracheal-NucSeq-Stromal-Schwann-Schwann_Myelinating|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ZNF536 RELN TRPM3 PEG10 SALL4

9.93e-061996454e4bdcd2e8b518156d5ebd294804180acaa3566b
ToppCellNeuronal-Inhibitory-iA-iA_1(SST_PAX6)-SST-BAGE2|Neuronal / cells hierarchy compared to all cells using T-Statistic

ZNF536 RELN EGFR PEG10 ANKFN1

1.02e-0520064526f07d271e984f375145e4c10528fba44a5811e1
ToppCellNeuronal-Inhibitory-iA-iA_1(SST_PAX6)-SST-BAGE2-L1-2|Neuronal / cells hierarchy compared to all cells using T-Statistic

ZNF536 RELN EGFR PEG10 ANKFN1

1.02e-05200645c3637827ceba16b0d7956c280dd2ddbc8b1ba55e
ToppCellTracheal-10x3prime_v2-Stromal-Myofibroblastic-Muscle_perivascular_immune_recruiting|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

TINAGL1 PSTK COL12A1 DGKG PLCD1

1.02e-05200645410b1a31de21c57d87ca2104f61cf4a7d4dd2f30
ToppCellNeuronal-Inhibitory-iA-iA_1(SST_PAX6)-SST-CHRNA4-L1|Neuronal / cells hierarchy compared to all cells using T-Statistic

ZNF536 RELN COL12A1 EGFR ANKFN1

1.02e-05200645e2ced6eb1de9a526c34c7558b9c637854916e624
ToppCellNeuronal-Inhibitory-iA-iA_1(SST_PAX6)-SST-CHRNA4|Neuronal / cells hierarchy compared to all cells using T-Statistic

ZNF536 RELN COL12A1 EGFR ANKFN1

1.02e-052006459bc924755e5a4c464408e6103b86bf1b4e8c58b5
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Sncg-Sncg_Vip_Nptx2|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

RELN TRPM3 PEG10 SPX

2.88e-0512264491e338db581b36baffecc323b1909f2069b27242
ToppCellE16.5-samps-Mesenchymal-Matrix_fibroblast-_fetal-Intermediate_Fibroblast|E16.5-samps / Age Group, Lineage, Cell class and subclass

ERFE DNAH10 SIK2 EPHA1

4.54e-05137644dd5364a1002650d21e0c83d8c701b5f7b09d1c19
ToppCellprimary_visual_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Chrna2_Ptgdr|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

SLC5A5 TRHDE RELN COL6A6

5.51e-0514464471107275767a0728541a3695715c44874b3e5efc
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Chrna2_Glra3|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

SLC5A5 TRHDE RELN DGKG

5.97e-0514764450e86860a94be103092c40e39a172eac92372f0d
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Lamp5-Lamp5_Ntn1_Npy2r|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

ZNF536 RELN EGFR PEG10

6.13e-051486445e738522d4ad35e08bc4ff8c41b7bea38ec6ef95
ToppCellfrontal_cortex|World / Per Region, Lineage, Cell class, Cell type, Cell subtype

COL12A1 DNAH10 DYSF SPX

6.80e-05152644f9c29d4568402ca07a717dbffb3ccc7f35c5fe56
ToppCellLPS_only-Epithelial_airway-Ciliated_cells-Ciliated|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC24A4 DNAH10 CFAP161 ANKFN1

7.15e-051546449ca71d440c4f87781e6525b8141e7d8d470b6a8e
ToppCellLPS_only-Epithelial_airway-Ciliated_cells|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC24A4 DNAH10 CFAP161 ANKFN1

7.15e-0515464458072ce422d09f2de602580325eaac6c4ec6c136
ToppCellPosterior_cortex-Neuronal-Inhibitory-iN2(Gad1Gad2)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

ZNF536 RELN EGFR PEG10

7.33e-05155644105d59d8a1bb8cb37eef2c1767d737b2108ac7c5
ToppCellfacs-Marrow-B-cells-24m-Lymphocytic-precursor_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE COL12A1 DNAH10 LRP2

8.29e-05160644c381ec6be8cf887861cc18f831a20db42f953fe1
ToppCellfacs-Marrow-B-cells-24m-Lymphocytic-pre_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE COL12A1 DNAH10 LRP2

8.29e-0516064425c8f3d2a6d14ff0ca0b965fce89d3ff22f40585
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Drd1-Excitatory_Neuron.Gad1Gad2.Drd1-Otof-Lmo2_(eccentric_SPN,_dSPN-like_markers)-|Striatum / BrainAtlas - Mouse McCarroll V32

SLC46A2 ADAM21 ANKFN1

8.43e-0559643dbb61f03be7d2c7fa7d32c743fcff2dc91ae0d75
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Drd1-Excitatory_Neuron.Gad1Gad2.Drd1-Otof-Lmo2_(eccentric_SPN,_dSPN-like_markers)|Striatum / BrainAtlas - Mouse McCarroll V32

SLC46A2 ADAM21 ANKFN1

8.43e-0559643e6cbbe1a4961066cae8f8c03a838f37e60a5391a
ToppCell343B-Epithelial_cells-Epithelial-H_(AT1)-|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

TINAGL1 RELN COL6A6 SPX

8.49e-05161644da9eecf919866a9c579d7a707a996cf335213134
ToppCell343B-Epithelial_cells-Epithelial-H_(AT1)|Epithelial_cells / Donor, Lineage, Cell class and subclass (all cells)

TINAGL1 RELN COL6A6 SPX

8.49e-05161644d431625c32f59a6b552191f3adc5198bd16ad5cf
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Sst|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

SLC5A5 TRHDE RELN DGKG

8.49e-05161644dccb61d5e17a8f1c6d1fc146ee389f567659a0f0
ToppCellFetal_29-31_weeks-Mesenchymal-vascular_smooth_muscle_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

SLC5A5 TINAGL1 DGKG KCNT1

8.91e-0516364451dee6c21cbeca4e17d1cc386e203f0c403089e8
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Neural-neural_cell-Schwann_Cell_/_Neural-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ZNF536 RELN SLC24A4 DGKG

9.56e-05166644f742d15b02a6f651bbd00f53e3d871f40d05a03d
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Neural|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ZNF536 RELN SLC24A4 DGKG

9.56e-051666440f013bb5fdb72e88c2fc73d60cd01551a2db6341
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Neural-neural_cell-Schwann_Cell_/_Neural|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ZNF536 RELN SLC24A4 DGKG

9.56e-05166644e941df9a1091164edde3def8fc7d410186b2bd88
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Neural-neural_cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

ZNF536 RELN SLC24A4 DGKG

9.56e-05166644aeda46bea5d8463c24a83b98b9ed92d962d733e5
ToppCellCOVID-19-kidney-PEC|COVID-19 / Disease (COVID-19 only), tissue and cell type

ZNF536 TRPM3 LRP2 SPX

1.00e-04168644a086c306be430adf0632ba53e98cd8014d2de330
ToppCellprimary_visual_cortex-Neuronal-GABAergic_neuron-Sst|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

SLC5A5 TRHDE RELN DGKG

1.05e-041706448ab67e2b6e30fdf9e9a2c02e31d4df34e751a3ed
ToppCell3'_v3-bone_marrow-Hematopoietic_progenitors-Progenitor_pre-Lymphocytic-T|bone_marrow / Manually curated celltypes from each tissue

TRHDE LCA5 DGKG FUT1

1.10e-04172644a66402d15853f0c9e3d06394ff9ac08d1da128ff
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_1-Inh_L1_SST_CXCL14|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN EGFR PEG10

1.12e-041736440ba64e5385fe714f876002520f8b5202809bf11e
ToppCell3'-GW_trimst-1.5-LargeIntestine-Neuronal-Glial_immature-Glia_1_(DHH+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

RELN SLC24A4 TRPM3 SYTL4

1.12e-04173644922356a5b4c84607318ac24d7caa2e235b72b066
ToppCellPND07-28-samps-Epithelial-Epithelial-non_alveolar-Ciliated_cell_of_lung_parenchyma|PND07-28-samps / Age Group, Lineage, Cell class and subclass

DNAH10 CFAP70 CFAP161 ANKFN1

1.15e-04174644f41d05a3703d7092bd3c4a97c15ae13069aaa4ad
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L2-6_VIP_VIP|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 COL12A1 EGFR SYTL4

1.17e-04175644e78bf0c33a741bb97e987e41ac33da9e623a08ec
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte-Chondrocyte_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

LCA5 HDAC6 PEG10 DYSF

1.17e-04175644a5db428b078938627e61b7e944c1e0c1d61ac2da
ToppCellBAL-Control-cDC_11|Control / Compartment, Disease Groups and Clusters

SLC24A4 TRPM3 CES1 PLCD1

1.17e-04175644daf014e15a354956e9149c83fd89d0af0d07eb00
ToppCellPND07-28-samps-Epithelial-Epithelial-non_alveolar|PND07-28-samps / Age Group, Lineage, Cell class and subclass

DNAH10 CFAP70 CFAP161 ANKFN1

1.17e-04175644c01a15b2084da4a18f8ff3623f44eb9dfe499f10
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-Chondrocyte|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

LCA5 HDAC6 PEG10 DYSF

1.17e-041756448b498eea1ec1c1f27b171025c3d08adf3687bafc
ToppCell343B-Lymphocytic-NK_cells-NK_cell_E|NK_cells / Donor, Lineage, Cell class and subclass (all cells)

SIK2 TOP6BL PLBD2 PNPO

1.17e-0417564478a86cac3e6c0d115c997d1c29ee0e24af54551f
ToppCellfacs-Aorta|facs / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TINAGL1 LRP2 DYSF ENPEP

1.20e-041766440b3491451be02c18a16cdb875645be47eb867a7f
ToppCellPrimary_Visual_cortex_(V1C)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L1-3_VIP_ZNF322P1|Primary_Visual_cortex_(V1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN SLC24A4 EGFR

1.22e-0417764484116796ca4c7007508c0f1a68a1135c7b922278
ToppCell3'-GW_trimst-1.5-LargeIntestine-Mesenchymal-fibroblastic-Stromal_3_(C7+)|GW_trimst-1.5 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

NEBL COL6A6 PEG10 ENPEP

1.22e-041776447af1a19692f7fe8f691178a4e57d62bc379e3d56
ToppCelldroplet-Fat-BAT+GAT+MAT-30m-Epithelial|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DNAH10 LRP2 CFAP70 CFAP161

1.25e-0417864458857bb8c13e0e1c6d9f5c1258f00fff62063d68
ToppCelldroplet-Spleen-nan-24m-Hematologic-erythroblast|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TINAGL1 UBE2B GLUL PNPO

1.25e-041786449c4950357087212b2388116ba8866c359628694d
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Mesenchymal-ependymal_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE SLC24A4 DNAH10 CFAP161

1.25e-04178644b1db59344c074c7c80169fc2c5cd5fc89f3fe463
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

TRHDE NEBL EGFR SPX

1.25e-04178644c20f050344a2e120e685e2a7fe36c6dfc1dc37b6
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

NAT1 DNAH10 CFAP70 ANKFN1

1.25e-04178644de5d50d7ca9ee9eb62f50c88a0c6d47f0694b2e6
ToppCelldroplet-Fat-BAT+GAT+MAT-30m-Epithelial-nan|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DNAH10 LRP2 CFAP70 CFAP161

1.25e-041786448b7df6ab8709d9ab9dff97677cc4561aec2745bc
ToppCellPBMC-Convalescent-Hematopoietic-Platelet-Platelet-plt_3|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

VWA8 SYTL4 CFAP161 SPX

1.25e-04178644850fcd368c4478c57eaedc74544773ea220f41f3
ToppCelldroplet-Fat-BAT+GAT+MAT-30m-Epithelial-epithelial_cell|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DNAH10 LRP2 CFAP70 CFAP161

1.25e-04178644b0baf5667e3301898b3e45e974b8a8530af6a338
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Mesenchymal-Ependyma|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TRHDE SLC24A4 DNAH10 CFAP161

1.25e-04178644579cdc14f28b459e200ae2102e0bd4df8a2c0dcb
ToppCellPBMC-Convalescent-Hematopoietic-Platelet-Platelet-plt_3|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

VWA8 SYTL4 CFAP161 SPX

1.25e-04178644a16857da9f2907c176213a326112a1b4cbd0e628
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L2-6_VIP_VIP|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN COL12A1 EGFR

1.28e-04179644cd7f0e8f4abb2a2bac366c8910c8c5fda841dbce
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Proximal_Tubule_Epithelial_Cell_Segment_3|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

NAT1 TRPM3 LRP2 ENPEP

1.28e-04179644d1ef7e1cb00336118e387b47f4f8120f53584391
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_1-Inh_L1_SST_CXCL14|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN EGFR ENPEP

1.28e-04179644c7afbd10072d36a35cd20ae73670d76b9cefd22d
ToppCellCOVID-19-kidney-PCT-S2|COVID-19 / Disease (COVID-19 only), tissue and cell type

TRPM3 LRP2 ENPEP SPX

1.31e-04180644358923e4228035a3e90e2957392089219e90dcd7
ToppCellfacs-GAT-Fat-3m-Epithelial-epithelial_cell|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRP2 CFAP70 CFAP161 ANKFN1

1.33e-04181644e97cbaafb93fdbee8e3cf4a06e6bcf121d941403
ToppCellfacs-GAT-Fat-3m-Epithelial|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRP2 CFAP70 CFAP161 ANKFN1

1.33e-0418164411cb84528f7ca084f0a92eda4f2e18e63a428fe9
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_1|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TRHDE NEBL EGFR SPX

1.33e-04181644071f9bb5d39070cdc473d9b0e094d196bc702b56
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_2|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TRHDE EGFR LRP2 SPX

1.33e-041816446956ecd6264f7469a25e555673bce4eb97d28f7a
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

NAT1 DNAH10 CFAP70 ANKFN1

1.33e-04181644dfce05bd472f67e6e2bb60ebd6fd34f0a9aeeca6
ToppCellfacs-GAT-Fat-3m-Epithelial-nan|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRP2 CFAP70 CFAP161 ANKFN1

1.33e-041816445ffeca29e4d31a20c110d27af128ed024a79ad56
ToppCellControl-Epithelial_cells-Airway_ciliated|Control / group, cell type (main and fine annotations)

NAT1 DNAH10 CFAP70 ANKFN1

1.36e-04182644fb725d10d9ed25dfc6d5bb69cfef78513f7d3e8f
ToppCellASK454-Epithelial|ASK454 / Donor, Lineage and Cell class of Lung cells from Dropseq

TINAGL1 COL12A1 NEBL SYTL4

1.36e-04182644ab15316cff989b61ff397a866d7ca8b49c13e981
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Inh_GABAergic-i_Gaba_2-GABA_VIP_2-Inh_L1-3_VIP_ZNF322P1|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

ZNF536 RELN SLC24A4 EGFR

1.36e-04182644d3a037268f026eb2f84428b1821022503cef7756
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_PVALB_1-Inh_L5-6_PVALB_FAM150B|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

TINAGL1 ZNF536 TRPM3 SPX

1.36e-04182644d4cb23b5a974c096a0ce84b47fe351eef44894d7
ToppCellCOPD-Epithelial-ATI|World / Disease state, Lineage and Cell class

COL12A1 NEBL EGFR PEG10

1.36e-04182644e95d946a43b1579af199900bb0e3eacbb9d65300
ToppCellCOVID-19-kidney-Distal_Epi_Doublet_(PCT)|COVID-19 / Disease (COVID-19 only), tissue and cell type

TRHDE TRPM3 LRP2 SPX

1.36e-041826449d67717a6e13bcb54c1297a3e4e3abf4e51628a3
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TRHDE NEBL EGFR SPX

1.39e-04183644738e94b50c4c08c727d4eed0708dda08aa6891b4
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Proximal_Tubule_Epithelial_Cell_Segment_1_/_Segment_2|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

HDAC6 TRPM3 LRP2 ENPEP

1.39e-04183644facd6dbe0851b537d70a899ac7485714ab27d071
ToppCell10x5'-bone_marrow-Hematopoietic_Erythro-Mega-Megakaryocyte_early|bone_marrow / Manually curated celltypes from each tissue

SYTL4 DGKG CFAP161 SPX

1.39e-041836443cc9f3dc3bc4bde1d3408b0a6ba58e135a11036d
ToppCellCOVID-19-kidney-PCT-S1|COVID-19 / Disease (COVID-19 only), tissue and cell type

TRHDE TRPM3 LRP2 ENPEP

1.39e-041836446878d14026c3df6aa12e45dfad94b32fa9d9b0b7
ComputationalGenes in the cancer module 4.

UBE2A UBE2B UBE2V2

2.27e-0521293MODULE_4
ComputationalGenes in the cancer module 82.

UBE2A UBE2B UBE2V2

3.44e-0524293MODULE_82
Drug3,2'-dimethyl-4-aminobiphenyl

NAT1 DYSF ENPEP

8.55e-0615623CID000025948
Drug[(4E)-4-[(2,2-difluoroethylamino)methylene]-6-methyl-5-oxo-3-pyridyl]methyl dihydrogen phosphate

SLC5A5 ABCB11 ALDH7A1

1.27e-0517623CID011840958
DrugLomefloxacin hydrochloride [98079-52-8]; Down 200; 10.4uM; PC3; HT_HG-U133A

TINAGL1 NEBL VWA8 GLUL SMARCA2 ALDH7A1

1.60e-051976263723_DN
DrugNS-398; Down 200; 10uM; MCF7; HT_HG-U133A

EHBP1L1 HDAC6 CPD PLCD1 ENPEP EPHA1

1.60e-051976266897_DN
DrugScopolamin-N-oxide hydrobromide [6106-81-6]; Down 200; 10uM; MCF7; HT_HG-U133A

SLC5A5 EHBP1L1 WIZ EGFR PLCD1 TOP6BL

1.60e-051976262262_DN
DrugBethanechol chloride [590-63-6]; Down 200; 20.4uM; MCF7; HT_HG-U133A

HDAC6 WIZ NEBL EGFR NCOA1 ENPEP

1.69e-051996265539_DN
Drug5,8,11,14-Eicosatetraynoic Acid

SLC5A5 EGFR CES1

1.81e-0519623ctd:D015117
DrugPCI-24781

HDAC6 HDAC10

2.18e-053622CID011749858
Diseaseschizophrenia (is_marker_for)

RELN EGFR GLUL

1.21e-0444643DOID:5419 (is_marker_for)
DiseaseN-acetylputrescine measurement

NAT1 HDAC10

3.01e-0412642EFO_0800127
Diseasecongenital heart disease (implicated_via_orthology)

UBE2A UBE2B LRP2

4.60e-0469643DOID:1682 (implicated_via_orthology)
Diseasesyndromic intellectual disability (implicated_via_orthology)

UBE2A UBE2B

5.45e-0416642DOID:0050888 (implicated_via_orthology)
DiseaseTourette syndrome, schizophrenia

ZNF536 DNAH10

6.93e-0418642EFO_0004895, MONDO_0005090
Diseasetemporal lobe epilepsy (is_marker_for)

RELN GLUL

8.58e-0420642DOID:3328 (is_marker_for)
Diseaseobesity (implicated_via_orthology)

HDAC6 DNAH10 GLUL NCOA1

1.24e-03215644DOID:9970 (implicated_via_orthology)
DiseaseIntrahepatic Cholangiocarcinoma

SLC5A5 EGFR

1.24e-0324642C0345905
DiseaseExtrahepatic Cholangiocarcinoma

SLC5A5 EGFR

1.24e-0324642C3805278
Diseaseresponse to venlafaxine

COL12A1 DYSF

1.35e-0325642EFO_0006328
DiseaseCholangiocarcinoma

SLC5A5 EGFR

1.46e-0326642C0206698
DiseaseMyopia

TRHDE TRPM3 TOP6BL DYSF ALDH7A1

1.49e-03385645HP_0000545
DiseaseMalignant mesothelioma

COL12A1 EGFR SMARCA2

1.73e-03109643C0345967
DiseaseChild Development Disorders, Specific

LRP2 KCNT1

1.81e-0329642C0085997
DiseaseChild Development Deviations

LRP2 KCNT1

1.81e-0329642C0085996
DiseaseDevelopmental Disabilities

LRP2 KCNT1

1.94e-0330642C0008073
Diseaseocular sarcoidosis

EGFR LRP2 CFAP161

2.07e-03116643EFO_0010723

Protein segments in the cluster

PeptideGeneStartEntry
WTLQMGYPVITILGN

TRHDE

591

Q9UKU6
GRSYQMWQPLELISG

NAT1

126

P18440
YMVGINKQEFGWLIP

CES1

346

P23141
WSEQQQILNGTPLYM

EPHA1

51

P21709
FPVAVYGWNNAIAMI

ALDH7A1

196

P49419
IGIEIWNQGNVFPMT

ADAM21

256

Q9UKJ8
LSGLEVQRSGPQYMW

GSDMA

406

Q96QA5
EWPYMLVGSVGAAVN

ABCB11

751

O95342
MAQNVYGPGVRIGNW

CFAP161

1

Q6P656
VPWGLQTMVVNYGST

SLC24A4

536

Q8NFF2
MNWLANLYEQGINGI

INO80

526

Q9ULG1
QEGYPMQIEQFWKGL

MMP24

411

Q9Y5R2
NPVGVGRYLNTWLME

LEXM

351

Q3ZCV2
YNNLEALPWEAVGQM

LRFN1

171

Q9P244
QEGQESPEQWQRMYG

KCNT1

521

Q5JUK3
YNVTAMNVPIAVWNG

LIPF

326

P07098
NGVLYLQMGQWTSVF

ERFE

316

Q4G0M1
GIQNPYRGTVVWMVP

EHBP1L1

61

Q8N3D4
GQGRSLYVPVMITWN

PEG10

661

Q86TG7
WETGRYQLGMYPIQN

LCA5

436

Q86VQ0
QSVVMYNIQWPLGIV

LRP2

1676

P98164
DTWTRQMGYPVLNVN

ENPEP

536

Q07075
LYPQVMEFWQGQTNR

PNPO

211

Q9NVS9
YVPMAAGSWIIGAVN

OR13C5

141

Q8NGS8
YVPMAAGSWIIGAVN

OR13C2

141

Q8NGS9
VEWAQQFGGAVMYPS

NDUFS2

41

O75306
GPILGNMWAIDNVYI

RELN

656

P78509
NYSPVEMWNGGCQIV

PLCD1

561

P51178
YAMNWVRQAPGQGLE

IGHV7-4-1

51

A0A0J9YVY3
AILNIPSMYGGTNLW

DGKG

656

P49619
PAGVMGENNTLVWKY

EGFR

596

P00533
LPWNQVGMGNADYVA

HDAC10

226

Q969S8
NIYDVGPTTMHVQWQ

COL12A1

1481

Q99715
AQMDYLNPNVWGLKG

CFAP70

956

Q5T0N1
NVPGGMQDWNYLQTN

CPD

741

O75976
MPSYAQLVQRGWGSA

CERS1

16

P27544
QGYTINVPWNQVGMR

HDAC6

301

Q9UBN7
NVPWNQVGMRDADYI

HDAC6

306

Q9UBN7
QGMGPAKESVWQYFV

DNAH10

2906

Q8IVF4
PVVWNQYTSMLNGGL

SALL4

966

Q9UJQ4
NQTRLPGGQWIYMSD

DYSF

956

O75923
QTLLEGQPWMETYLQ

COL6A6

1201

A6NMZ7
WTVYPNGRFGNQMGQ

FUT1

81

P19526
PQGEKVQAMYIWIDG

GLUL

21

P15104
MRQYPGSWAEGTLQL

SYTL4

646

Q96C24
NWTPQAMLYLKGAQG

SPX

36

Q9BT56
MIKAINQGNYGWQAG

TINAGL1

146

Q9GZM7
GLEWMVSLYNNNLNG

SMARCA2

731

P51531
AFPVQQMEIWGVYTL

TOP6BL

336

Q8N6T0
GYQSPDMKAWQQGAI

NCOA1

1276

Q15788
QQYEGPQLDIWSMGV

SIK2

191

Q9H0K1
LRQMGVTEWYVNGSP

WIZ

1066

O95785
QVSAYNMKGWGPAQT

ANKFN1

346

Q8N957
QAANPQYVWDRMLGG

CLASP1

121

Q7Z460
PMIYEGQAQLWTDLQ

RNF213

566

Q63HN8
GTLVWLSMYGVNQAQ

SLC5A5

251

Q92911
IYGQQWPVGSLEQAM

TRPM3

501

Q9HCF6
QGWAIGVVAYDDVMP

PSTK

46

Q8IV42
NNIMVWNAVIFGPEG

UBE2A

31

P49459
GYSVVMAGRNVWQPT

nan

651

Q3C1V9
DPVNSYQAWQLMARG

ZNF536

516

O15090
WTGMIIGPPRTNYEN

UBE2V2

46

Q15819
EPLGWNQVQVGYGMA

SLC46A2

311

Q9BY10
NQWMIVDYKAFIPGG

PLBD2

376

Q8NHP8
TLPEQTFMGYWTIGQ

VWA8

1041

A3KMH1
NNIMQWNAVIFGPEG

UBE2B

31

P63146
IVNVQPIDDGWMYGT

NEBL

981

O76041