Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
HumanPhenoWidely-spaced maxillary central incisors

CHSY1 STAG1

9.65e-051082HP:0001566
HumanPhenoWidely-spaced incisors

CHSY1 STAG1

1.67e-041382HP:0006304
HumanPhenoCentral incisor gap

CHSY1 STAG1

1.67e-041382HP:0001570
HumanPhenoAbnormal spaced incisors

CHSY1 STAG1

1.95e-041482HP:0040159
HumanPhenoMisalignment of incisors

CHSY1 STAG1

2.56e-041682HP:0011062
Pubmed

SIK2 promotes reprogramming of glucose metabolism through PI3K/AKT/HIF-1α pathway and Drp1-mediated mitochondrial fission in ovarian cancer.

SIK2 DNM1L

1.74e-06327231639424
Pubmed

Prediction of the coding sequences of unidentified human genes. XI. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.

SIK2 RHOBTB1 SPON1

6.61e-051012739872452
Pubmed

Differential regulation of NF-κB-mediated proviral and antiviral host gene expression by primate lentiviral Nef and Vpu proteins.

HGF IFI44L

6.92e-051627225620704
Pubmed

The functional interactome landscape of the human histone deacetylase family.

PDCD11 STAG1 CCT3 DNAJA2

7.05e-0528927423752268
Pubmed

A function for cyclin D1 in DNA repair uncovered by protein interactome analyses in human cancers.

DNM1L CCT3 DNAJA2

1.24e-0412527321654808
Pubmed

An interaction between OTULIN and SCRIB uncovers roles for linear ubiquitination in planar cell polarity.

DNM1L DNAJA2

1.72e-042527237589075
Pubmed

Integrative analysis of kinase networks in TRAIL-induced apoptosis provides a source of potential targets for combination therapy.

SIK2 DENND6A CCT3 DNAJA2

2.48e-0440127425852190
Pubmed

Secondary Placental Defects in Cxadr Mutant Mice.

HGF VEGFB

2.84e-043227231338035
Pubmed

TRiC controls transcription resumption after UV damage by regulating Cockayne syndrome protein A.

CCT3 DNAJA2

3.80e-043727229531219
Pubmed

A SMAD1/5-YAP signalling module drives radial glia self-amplification and growth of the developing cerebral cortex.

NAV1 CCT3

4.01e-043827232541003
Pubmed

ADAM10 hyperactivation acts on piccolo to deplete synaptic vesicle stores in Huntington's disease.

DNM1L TSPAN14 DNAJA2

5.09e-0420227333601422
Pubmed

Voltage-dependent conformational changes of Kv1.3 channels activate cell proliferation.

DNM1L CCT3 OTOG

5.55e-0420827333230847
Pubmed

GRWD1 regulates ribosomal protein L23 levels via the ubiquitin-proteasome system.

PDCD11 CCT3 DNAJA2

6.61e-0422127329991511
Pubmed

KCTD13-mediated ubiquitination and degradation of GluN1 regulates excitatory synaptic transmission and seizure susceptibility.

PLXNA4 NAV1 DNM1L CCT3 SPON1 DNAJA2

6.75e-04143127637142655
Pubmed

Ggnbp2 Is Essential for Pregnancy Success via Regulation of Mouse Trophoblast Stem Cell Proliferation and Differentiation.

HGF VEGFB

7.23e-045127226764350
GeneFamilyActins|Deafness associated genes

HGF SLC26A5

5.55e-031131821152
CoexpressionGSE6259_FLT3L_INDUCED_DEC205_POS_DC_VS_CD4_TCELL_UP

DNM1L ZYG11B TSPAN14 DENND6A STAG1 TMEM135

1.40e-08163276M6763
CoexpressionWAKABAYASHI_ADIPOGENESIS_PPARG_BOUND_8D

SIK2 NAV1 CHSY1 TSPAN14 DNAJA2 TMEM135

4.17e-05646276M2419
CoexpressionWAKABAYASHI_ADIPOGENESIS_PPARG_BOUND_8D

SIK2 NAV1 CHSY1 TSPAN14 DNAJA2 TMEM135

5.32e-05675276MM1073
ToppCellRA-11._Adipocyte|World / Chamber and Cluster_Paper

PLXNA4 SIK2 LGALS12 SPON1 TMEM135

9.05e-081882754dac9d636e5cad4cda540b93d4bfed6b5732c880
ToppCellTCGA-Lung-Primary_Tumor-Lung_Carcinoma-Lung_Squamous_Cell_Carcinoma-4|TCGA-Lung / Sample_Type by Project: Shred V9

PLXNA4 MEDAG CHSY1 SPON1

3.08e-06168274aefea14b8b1c1b6a05f827effd22ba15274fddc9
ToppCellLV-11._Adipocyte|LV / Chamber and Cluster_Paper

PLXNA4 SIK2 LGALS12 SPON1

3.46e-06173274c2d3fcb3de71015d03d14c63450853d2b03ffa71
ToppCellRV-11._Adipocyte|World / Chamber and Cluster_Paper

PLXNA4 SIK2 LGALS12 SPON1

3.79e-06177274f0edf04930692418953e4f00a917257804ec0ffd
ToppCellRV-11._Adipocyte|RV / Chamber and Cluster_Paper

PLXNA4 SIK2 LGALS12 SPON1

3.87e-06178274278bbea5cf8f0589f71675c7a3d00679391b5253
ToppCellRA-11._Adipocyte|RA / Chamber and Cluster_Paper

PLXNA4 SIK2 LGALS12 TMEM135

4.05e-06180274d48a3d27357f7d184132a6805950f93080146b59
ToppCellLA-11._Adipocyte|World / Chamber and Cluster_Paper

PLXNA4 SIK2 LGALS12 TMEM135

4.32e-06183274b177be283e1553fb1f69a346f1ba79ad00297fa2
ToppCellLA-11._Adipocyte|LA / Chamber and Cluster_Paper

PLXNA4 SIK2 LGALS12 TMEM135

4.32e-061832743f9011976782fa8aa95cdd6f00f07a91094d411b
ToppCellAdult-Mesenchymal-matrix_fibroblast_2_cell-D175|Adult / Lineage, Cell type, age group and donor

PLXNA4 NAV1 MEDAG SPON1

5.01e-061902747dcca3469f3a3b70db0420cb94f7765f39492f06
ToppCellSmart-seq2-thymus_(Smart-seq2)-myeloid-myeloid_macrophage-macrophage|thymus_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

ZYG11B TSPAN14 RHOBTB1 VEGFB

5.78e-06197274e567886d69c6ea8dec87019c2ebc593793cb3107
ToppCellSmart-seq2-thymus_(Smart-seq2)-myeloid-myeloid_macrophage|thymus_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

ZYG11B TSPAN14 RHOBTB1 VEGFB

5.78e-06197274e3349a381723393cd255f202afedd0c99037939b
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Macroglial|6_mon / Sample Type, Dataset, Time_group, and Cell type.

PLXNA4 NAV1 SPON1 VEGFB

5.78e-06197274965d5a3f8c9b12cb8a8d3429702ae29ebd8c6122
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-6_mon-Macroglial-Astroglia|6_mon / Sample Type, Dataset, Time_group, and Cell type.

PLXNA4 NAV1 SPON1 VEGFB

5.78e-061972743f088eb29197bc575400d6dafd8083e69e4a149f
ToppCellStriatum-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Notum_(Notum)--|Striatum / BrainAtlas - Mouse McCarroll V32

HGF LGALS12 SDR9C7

1.59e-0581273c9145c994abcf49e5492270b18b0580a3d771ccf
ToppCellStriatum-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Notum_(Notum)|Striatum / BrainAtlas - Mouse McCarroll V32

HGF LGALS12 SDR9C7

1.59e-0581273f84bfa55c6b9548f8829b16a145690d207a7bfc1
ToppCellStriatum-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Notum_(Notum)-|Striatum / BrainAtlas - Mouse McCarroll V32

HGF LGALS12 SDR9C7

1.59e-058127334d2a2c30c749bd2ad447dfb1e43444953d9b154
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d02_child-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c01-LEF1|Mild-Moderate_progression_d02_child / Compartment, severity and other cell annotations on 10x 3' data (130k)

TSPAN14 CLUAP1 DENND6A

1.91e-058627379c4326df78f0a5b3ef13b2fb4e5074934536e35
ToppCellControl-Endothelial-Endothelial-Activated_Gen_Cap|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

NAV1 CHSY1 IFI44L

5.29e-05121273a5962d1c476e6966870832b72d511607e047248b
ToppCellCOVID-19-Heart-Adipocyte|COVID-19 / Disease (COVID-19 only), tissue and cell type

PLXNA4 MEDAG LGALS12

1.06e-0415327393958bd9c951222ba5b740d1cb83fd5d78a10e1e
ToppCellLV-11._Adipocyte|World / Chamber and Cluster_Paper

PLXNA4 LGALS12 SPON1

1.35e-041662737e5852891714465c6228c9f955fd511ec79d0e02
ToppCelldroplet-Kidney-nan-3m-Epithelial-Epcam____brush_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LGALS12 IFI44L UGT3A1

1.38e-0416727340d102e01ccbc7262d00fafd59ca5234909009cb
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-proliferative_fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PLXNA4 HGF SPON1

1.43e-04169273a84490724a206c9bbb145f7ce08613f91d100ac4
ToppCelldroplet-Marrow-nan-24m-Lymphocytic-late_pro-B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PLXNA4 RHOBTB1 SPON1

1.55e-04174273cdfc50e5383c8670ce5109736aff36406f46c03d
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEDAG HGF SPON1

1.58e-04175273f0c2eb82e17e8aec2cfa5d83169178f409cc1abc
ToppCellrenal_cortex_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-kidney_interstitial_fibroblast-kidney_interstitial_fibroblast_5|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEDAG HGF SPON1

1.58e-04175273910a075ccaf79de22338ecf321fa0a867f3d7d75
ToppCell5'-Airway_Nasal-Immune_Myeloid-Myeloid_macrophage-lung_macrophage|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CHSY1 DNM1L VEGFB

1.77e-041822734a85429d365c4b2d73fc921f261b4b7635ac40bd
ToppCell5'-Airway_Nasal-Immune_Myeloid-Myeloid_macrophage-lung_macrophage-Interstitial_macrophage_perivascular|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CHSY1 DNM1L VEGFB

1.77e-0418227353213af34af3337f5edc734d3b7b79e4349eac0d
ToppCell5'-Airway_Nasal-Immune_Myeloid-Myeloid_macrophage-lung_macrophage-Interstitial_macrophage_perivascular-Interstitial_macrophage_perivascular_L.1.2.1.1|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CHSY1 DNM1L VEGFB

1.77e-041822737909089ed6325c44edd6f9b7e8b1d542398222ea
ToppCell5'-GW_trimst-2-SmallIntestine-Endothelial-lymphatic_endothelial-LEC5_(CLDN11+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

NAV1 HGF TSPAN14

1.86e-04185273241ea1e178fffef9e7df971de739e794332d5173
ToppCellAdult-Mesenchymal-matrix_fibroblast_2_cell-D231|Adult / Lineage, Cell type, age group and donor

NAV1 HGF SPON1

1.86e-04185273fb6bd7e849ecf4ed9cd9c4e2a946a2d12d62f804
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibro-meso-mesothelial_cell-Mesothelium-Mesothelium_L.2.6.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

PLXNA4 MEDAG LGALS12

1.95e-04188273e2bee29865805d4db30b090d4bce9a1f5311cf51
ToppCellfacs-Large_Intestine-Proximal-18m-Epithelial-large_intestine_goblet_cell|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LGALS12 PIWIL2 VEGFB

1.98e-041892735a0fd34928117f162c83ca1b068aa8f7069a6765
ToppCellLPS_only-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

1.98e-041892732a22b9fae70afb3dab8476f9c00e48a4df756410
ToppCell(0)_Myeloid-(01)_Dendritic_cell|(0)_Myeloid / immune cells in Peripheral Blood (logTPM normalization)

PLXNA4 CCT3 VEGFB

2.01e-04190273e9507bb0c8ff3d071402731a9b8cfe1bba93fab0
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Diff_MatrixFB|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.01e-04190273841cd55861b43578d704418b9bc0af2e8b88323a
ToppCellLPS_only-Stromal_mesenchymal-Matrix_Fibroblast-Diff_MatrixFB|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.01e-04190273d60395739458d7f47a3350ade751fe3819500320
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.04e-04191273b13229bb7f3713a392271aaf5dbae3edd1b9fe5a
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.08e-041922736f4ef24dab544681304b7f8a9dc073e7edaa4cf5
ToppCellCOVID-19_Mild-PLT_1|World / Disease Group and Platelet Clusters

LGALS12 IFI44L RHOBTB1

2.08e-04192273c86cb4b2df5102af904c362f3cbd24fe4462ba6c
ToppCellfacs-Heart-LV-3m-Mesenchymal-fibroblast_of_cardiac_tissue|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAV1 MEDAG SPON1

2.08e-04192273671d4e1eee5aba03c43dbc98f4b51ce42b3df5d5
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.08e-041922733d0cb19f037f604253d7d728689aeaa94251e92b
ToppCellfacs-Heart-LV-3m-Mesenchymal-fibroblast_of_cardiac_tissue|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NAV1 MEDAG SPON1

2.08e-04192273840a34c1b82d218be999ab5e1bcafd6370d7a4b1
ToppCellAdult-Mesenchymal-matrix_fibroblast_2_cell|Adult / Lineage, Cell type, age group and donor

NAV1 MEDAG SPON1

2.08e-04192273d21f0f577156f17c899b08871046a26b88aea011
ToppCellLPS-IL1RA-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.08e-04192273deeecd26972241846b4cb998edf0c7a87ff0c4df
ToppCellLPS-IL1RA+antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.11e-04193273fb28717fadd06c3840636d25409ce80c9254bd34
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Endothelial-blood_vessel_endothelial_cell_of_kidney-arteriolar_vasa-recta_endothelial-Afferent_/_Efferent_Arteriole_Endothelial_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

PLXNA4 NAV1 IFI44L

2.11e-041932730b328f725f6feba263783eaca60c142e80df90f3
ToppCellLPS-antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-MatrixFB|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

PLXNA4 HGF SPON1

2.14e-0419427360622bd2f75bfe4c37f721cb12f03dab33f2f58d
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PLXNA4 HGF SPON1

2.14e-04194273ba7f971fb9a19423602da60770f23d9fead4a451
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

PLXNA4 HGF SPON1

2.14e-04194273cf0244a29934e515446ac917d3c30672b460fb04
ToppCellLV-14._Fibroblast_III|LV / Chamber and Cluster_Paper

MEDAG CHSY1 SPON1

2.14e-04194273927c26aea0147f7a4b8fb3f192de4de263f1b978
ToppCellkidney_cells-Adult_normal_reference-Mesenchymal-Fibroblast|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

MEDAG HGF SPON1

2.17e-0419527347762d9e442fb1f6f0033e3e10f4c6e498d2c081
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibroblastic-fibroblastic_type_1-Adventitial_fibroblasts-Adventitial_fibroblasts_L.2.1.2.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MEDAG HGF SPON1

2.17e-04195273f54bc4454270ff06e85596f98199372b50d0179f
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_2_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

NAV1 MEDAG SPON1

2.20e-04196273525d6c8a277364e624e7cc586275f8a891436b57
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Endothelial-blood_vessel_endothelial_cell_of_kidney-capillary-immature_endothelial_cell-Peritubular_Capilary_Endothelial_Cell_|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

NAV1 TSPAN14 IFI44L

2.20e-04196273023312af38f816a44b407e0daa32590d953caf99
ToppCellmild-pDC|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

PLXNA4 IFI44L VEGFB

2.24e-041972730cb00daa6943f7a7fb34a8fdf51188646af65686
ToppCellBronchial-10x5prime-Stromal-Mesofibroblastic-Mesothelia|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

PLXNA4 MEDAG LGALS12

2.24e-0419727326888af95a7cc082a1f1218af35b1f07cb9436ed
ToppCellBronchial-10x5prime-Stromal-Mesofibroblastic|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

PLXNA4 MEDAG LGALS12

2.24e-04197273438de7f0d35d81d5f5e41dcef7b2c54b6da03df4
ToppCellCOVID-19-COVID-19_Severe-Myeloid-pDC|COVID-19_Severe / Disease, condition lineage and cell class

PLXNA4 IFI44L VEGFB

2.27e-04198273033ed362333e1d33f2aeea8da5865d2228d154dc
ToppCellCOVID-19-lung-Fibroblast|lung / Disease (COVID-19 only), tissue and cell type

PLXNA4 HGF SPON1

2.27e-04198273df3de77216f5c5d6141ec44d01c56b942f611838
ToppCellLPS_IL1RA-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

PLXNA4 HGF SPON1

2.31e-04199273a7dd94b172c973a131a6792f8ccd9bfe44d984ac
ToppCellLPS_anti-TNF-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_anti-TNF / Treatment groups by lineage, cell group, cell type

PLXNA4 HGF SPON1

2.34e-042002739b0916d8d07ac2bf1739f7be5296bf77ffee6094
ToppCellcellseq-Mesenchymal-Fibroblastic|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

MEDAG HGF SPON1

2.34e-042002738978867bf69c830b1e48cac2ad6b512dbe60f149
ToppCellParenchyma_Control_(B.)-Stromal-TX|Parenchyma_Control_(B.) / Sample group, Lineage and Cell type

MEDAG HGF SPON1

2.34e-042002730a86656d48e4238d0e4d592d477d29f7ba7c2ec0
ToppCellBronchial-NucSeq-Stromal-Fibroblastic-Fibro_adventitial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

NAV1 MEDAG SPON1

2.34e-04200273ad3fdcef895400f929f2ae12ff9bd85fd46adb3a
ToppCellBronchial-NucSeq-Stromal-Fibroblastic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MEDAG HGF SPON1

2.34e-04200273cae972324d1dfea6efeaf6013f265c7c6bb48db4
ToppCellLung_Parenchyma-Control-Mesenchymal-Mesenchymal|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

MEDAG HGF SPON1

2.34e-042002733fa7d9ea67f9cc55478d085da53babd03dbe9bb1
ToppCellBiopsy_IPF-Mesenchymal|Biopsy_IPF / Sample group, Lineage and Cell type

MEDAG HGF SPON1

2.34e-04200273bb605b373caf3f873dc1b87d712704568e0d6040
ToppCell3'-Parenchyma_lung-Mesenchymal|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MEDAG HGF SPON1

2.34e-04200273ba5ed66b05caa1be0bbf8d54c4e72a782b8d9833
ToppCellFibroblast|World / shred by cell class for parenchyma

MEDAG HGF SPON1

2.34e-04200273dec9ce1bc2571197003596f32e5f742ede72aa79
ToppCellLung_Parenchyma-Control-Mesenchymal|Control / Location, Disease Group, Cell group, Cell class (2021.03.09)

MEDAG HGF SPON1

2.34e-042002731e75d1302c22e1b1666c19c0c9259d5cc8be16d5
ToppCellBiopsy_Other_PF-Mesenchymal|Biopsy_Other_PF / Sample group, Lineage and Cell type

MEDAG HGF SPON1

2.34e-04200273d6fcdd48858b53b5a8d18ae14b2dc4d9af41b070
ToppCellParenchymal-NucSeq-Stromal-Fibroblastic-Fibro_adventitial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

NAV1 MEDAG SPON1

2.34e-0420027374e74123ea7bf38d337a3a0248a6a51437c6ab42
ToppCell3'-Parenchyma_lung-Mesenchymal-Fibroblastic|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MEDAG HGF SPON1

2.34e-042002732e4ab7fbd94d3d865ef6188d3b4916d2bf1b8d89
ToppCellPosterior_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_1-Bcl6-Excitatory_Neuron.Slc17a7.Bcl6-Fos_(Layer_5a,_IEG+)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

PIWIL2 SLC26A5

2.67e-0440272b4c04100180790e1a53a15e8311e40015306c088
ToppCellStriatum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Pvalb-Inhibitory_Neuron.Gad1Gad2.Pvalb-Rgs12_(Fast-spiking_interneuron,_Pvalb+/Rgs12+)-|Striatum / BrainAtlas - Mouse McCarroll V32

NAV1 SLC26A5

5.81e-04592722d77ae08fa9836bbae158a0e466806a5f9236b5e
ToppCellStriatum-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Pvalb-Inhibitory_Neuron.Gad1Gad2.Pvalb-Rgs12_(Fast-spiking_interneuron,_Pvalb+/Rgs12+)|Striatum / BrainAtlas - Mouse McCarroll V32

NAV1 SLC26A5

5.81e-0459272d49a63218a045f3d032d135aee234a3269222abd
ToppCellEntopeduncular-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Htra1_(Htra1)-|Entopeduncular / BrainAtlas - Mouse McCarroll V32

HGF LGALS12

7.49e-04672728502da9042f40e0a44354776bb507e18ef0cda43
ToppCellEntopeduncular-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Htra1_(Htra1)--|Entopeduncular / BrainAtlas - Mouse McCarroll V32

HGF LGALS12

7.49e-0467272e6d051404f095ab9ca95fa6e5ecf0905573a5a63
ToppCellEntopeduncular-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Htra1_(Htra1)|Entopeduncular / BrainAtlas - Mouse McCarroll V32

HGF LGALS12

7.49e-04672723a3a3e76f67c1d33bd7b1d0d94c522ad1e1192f8
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Ptprz1_(Ptprz1)|Hippocampus / BrainAtlas - Mouse McCarroll V32

NAV1 OTOG

7.71e-04682729ce22a6dea3c17d5352572ea0dabe6c6120b9f82
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P3-Tnr-Polydendrocyte.Tnr.Ptprz1_(Ptprz1)-|Hippocampus / BrainAtlas - Mouse McCarroll V32

NAV1 OTOG

7.71e-046827289d337147899a978a7467db24e876a613bdd2288
ToppCellSubstantia_nigra-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Gad1Gad2.Ndnf_(medial_geniculate_nucleus,_ventral_part_(MGV)?_Or_State?)--|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HGF PIWIL2

9.12e-0474272c68b00cf7d2cec7951b78e2c6710d7770b02566a
ToppCellSubstantia_nigra-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Gad1Gad2.Ndnf_(medial_geniculate_nucleus,_ventral_part_(MGV)?_Or_State?)-|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HGF PIWIL2

9.12e-0474272bad24c9251ef44c05f3390073732a467aaeefe1e
ToppCellSubstantia_nigra-Neuronal-Inhibitory-iN1(Gad1Gad2_Th)-Inhibitory_Neuron.Gad1Gad2.Ndnf_(medial_geniculate_nucleus,_ventral_part_(MGV)?_Or_State?)|Substantia_nigra / BrainAtlas - Mouse McCarroll V32

HGF PIWIL2

9.12e-0474272195fd37345a394c0b60f713bedadf6fd08dc050c
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Sst-Sst_Rxfp1_Eya1|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

SPON1 OTOG

1.12e-038227242017b8ace6f142a8358213c95a2632226c3a867
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P3|Hippocampus / BrainAtlas - Mouse McCarroll V32

NAV1 OTOG

1.34e-0390272a0baaf2b3cf07d457f0d242fc213689cba6fd449
ToppCellHippocampus-Macroglia-POLYDENDROCYTE-P3-Tnr|Hippocampus / BrainAtlas - Mouse McCarroll V32

NAV1 OTOG

1.34e-0390272ab4b08c6ac8695b38f841c0ecf2bb2c032111d04
ToppCellStriatum-Macroglia-POLYDENDROCYTE-P5-P5_1-Sox4-POLYDENDROCYTE_(Rostral-�migratory_stream-�(RMS)_(Tuba1c))|Striatum / BrainAtlas - Mouse McCarroll V32

PIWIL2 SLC26A5

1.69e-031012720b32e6071f05dbe808e51e18c3a3f8221f438f83
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-Mes-Like-Differentiating_AT1|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

OTOG SLC26A5

1.93e-03108272d620f07243c2628494e689bbfabc14c453f4b1f4
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-Mes-Like|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

OTOG SLC26A5

2.00e-03110272c80d1c3df75648e2c8f6832279c2acca63d76681
ToppCellGlobus_pallidus-Macroglia-ASTROCYTE-Gja1|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

LGALS12 IFI44L

2.03e-031112727d7aad8e9811c67fb9abfb4ebc75def01a517adf
ToppCellGlobus_pallidus-Macroglia-ASTROCYTE|Globus_pallidus / BrainAtlas - Mouse McCarroll V32

LGALS12 IFI44L

2.03e-03111272cb45322fbeafec2f1ab7a3727da69abb1047567d
ToppCellTCGA-Colorectal-Primary_Tumor-Colorectal_Adenocarcinoma-Mucinous_Colon_Adenocarcinoma-7|TCGA-Colorectal / Sample_Type by Project: Shred V9

PLXNA4 OTOG

2.03e-031112726a03fbeea8363a142c3c4d68e5aab106ce1bab31
ToppCellStriatum-Macroglia-ASTROCYTE|Striatum / BrainAtlas - Mouse McCarroll V32

HGF LGALS12

2.33e-031192720583387cc4497cf991fa42a81f2f66d9c6b774eb
ToppCellStriatum-Macroglia-ASTROCYTE-Gja1|Striatum / BrainAtlas - Mouse McCarroll V32

HGF LGALS12

2.33e-03119272d47880ef1cff036192c43646a04fa8598dd7e1f4
ToppCell(05)_Ciliated-(2)_48hpi|(05)_Ciliated / shred by cell type and Timepoint

DNM1L OTOG

2.53e-03124272fc8cce8c1809edafbc4e69e501dd4f016f5dfc0b
ToppCellFrontal_cortex-Neuronal-Excitatory-eN1(Slc17a7)-eN1_2-Nptxr-Excitatory_Neuron.Slc17a7-Slc17a6.Nptxr-Rorb_(Deep_layer_pyramidal_cells--Layer_5a)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

HGF SDR9C7

2.57e-03125272be820e4db3da737101f34ea9d2848a3ceb53f417
ToppCellSmart-seq2-lymph_node_(Smart-seq2)-hematologic-erythrocytic|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

HGF OTOG

2.61e-03126272cd02f3d4a3fadd24f3a298639b392f0354d227d2
ToppCellSmart-seq2-lymph_node_(Smart-seq2)-hematologic|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

HGF OTOG

2.61e-03126272f2ec5aa6c649ae1ff99519f6897cf207dc292edf
ToppCellSmart-seq2-lymph_node_(Smart-seq2)-hematologic-erythrocytic-erythrocyte|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

HGF OTOG

2.61e-0312627261a7e400cbc81691b21cd3c37376c1d19fec2270
DiseaseNonsyndromic Deafness

HGF OTOG SLC26A5

5.56e-0581273C3711374
Diseasebone fracture

PLXNA4 CHSY1 TMEM135

1.46e-04112273EFO_0003931
Diseasepulmonary fibrosis (is_marker_for)

HGF DNM1L

3.93e-0432272DOID:3770 (is_marker_for)
DiseaseNonsyndromic Hearing Loss and Deafness, Autosomal Recessive

HGF SLC26A5

1.00e-0351272cv:CN043650
Diseasecoronary artery disease, plasminogen activator inhibitor 1 measurement

TSPAN14 STAG1

1.52e-0363272EFO_0001645, EFO_0004792
Diseasetissue plasminogen activator measurement, coronary artery disease

TSPAN14 STAG1

1.93e-0371272EFO_0001645, EFO_0004791
DiseaseNonsyndromic genetic hearing loss

HGF SLC26A5

2.20e-0376272cv:C5680182
Diseaseurate measurement, bone density

PLXNA4 NAV1 RHOBTB1 SLC26A5

2.29e-03619274EFO_0003923, EFO_0004531
DiseaseParkinson Disease

HGF DNM1L

2.75e-0385272C0030567
Diseasemyocardial infarction (is_implicated_in)

HGF VEGFB

3.70e-0399272DOID:5844 (is_implicated_in)
Diseaseestradiol measurement

NAV1 UGT3A1

4.55e-03110272EFO_0004697
Diseasecoronary artery disease, factor VII measurement

TSPAN14 STAG1

4.63e-03111272EFO_0001645, EFO_0004619
Diseasemultiple myeloma

HGF LGALS12

4.71e-03112272EFO_0001378
Diseasefactor VIII measurement, coronary artery disease

TSPAN14 STAG1

4.79e-03113272EFO_0001645, EFO_0004630
Diseasefactor XI measurement, coronary artery disease

TSPAN14 STAG1

4.96e-03115272EFO_0001645, EFO_0004694
Diseasevon Willebrand factor measurement, coronary artery disease

TSPAN14 STAG1

5.21e-03118272EFO_0001645, EFO_0004629

Protein segments in the cluster

PeptideGeneStartEntry
AMDVLMGRVIPVKLG

DNM1L

226

O00429
QSRVMNVHKMLGIPI

IFI44L

381

Q53G44
LIGRHKVMARVGGME

PLXNA4

1206

Q9HCM2
GLHAGKMVMLQGVVP

LGALS12

56

Q96DT0
KMVMLQGVVPLDAHR

LGALS12

61

Q96DT0
QHKMRMVLGVIVPGR

HGF

681

P14210
HPKIRRQIEQGMDMV

MEDAG

141

Q5VYS4
GVRIMIRQLAPGMVQ

DNAJA2

166

O60884
TLHMLPMVKRARGRV

SDR9C7

141

Q8NEX9
PIMGVVMKVRIPTCH

DENND6A

226

Q8IWF6
MRVQLPHVMGSARLQ

OTOG

231

Q6ZRI0
LRVVVRMPPQHIIKG

NAV1

1421

Q8NEY1
KGHVIRTRMIQMEPQ

SPON1

686

Q9HCB6
MHRGVGPAFRVVRKM

PTRHD1

1

Q6GMV3
LVNMLEKIAGPIGMR

PIWIL2

621

Q8TC59
GVNPAVIMGARRKAM

SLC26A5

561

P58743
MVMADGPRHLQRGPV

SIK2

1

Q9H0K1
RGVMINKDVTHPRMR

CCT3

216

P49368
KGFIGMHREMQVNPI

RHOBTB1

376

O94844
IMSREVLRRMVPHIG

CHSY1

226

Q86X52
EMLMQGRPGKRIVGT

CLUAP1

341

Q96AJ1
KVGEQMRGLVPPMHL

PDCD11

471

Q14690
MEAIRHGVPMVGLPV

UGT3A1

376

Q6NUS8
EILKLVVTGMRNHPM

ZYG11B

361

Q9C0D3
KPGRMNMIGLVRKFV

TMEM135

216

Q86UB9
MKVRTGVRHAVRGLM

STAG1

1176

Q8WVM7
PTGQHQVRMQILMIR

VEGFB

91

P49765
MHGIDPVVLVLMVGV

TSPAN14

56

Q8NG11