Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	5S rRNA binding	NOP53 RPL3 RPL4	6.14e-05	14	113	3	GO:0008097
GeneOntologyMolecularFunction	rRNA binding	NOP53 NOL12 RPL3 RPL4 RBM34	8.57e-05	79	113	5	GO:0019843
GeneOntologyBiologicalProcess	rRNA metabolic process	RIOK1 RRP1B NOP53 DDX56 RPS27 KAT2B XRN1 PRKDC RBM34	1.80e-05	275	111	9	GO:0016072
GeneOntologyBiologicalProcess	rRNA processing	RIOK1 RRP1B NOP53 DDX56 RPS27 KAT2B PRKDC RBM34	3.49e-05	230	111	8	GO:0006364
GeneOntologyBiologicalProcess	DNA damage response	CDK9 PMS2P5 SP100 ERCC5 NOP53 NSMCE3 FANCM ZNF365 NEDD4 PYHIN1 KAT2B AUNIP KMT5B PRKDC TOP2A KIF22	5.42e-05	959	111	16	GO:0006974
GeneOntologyBiologicalProcess	ribosome biogenesis	RIOK1 DDX31 RRP1B NOP53 DDX56 RPS27 KAT2B PRKDC RBM34	8.54e-05	336	111	9	GO:0042254
GeneOntologyCellularComponent	nuclear body	CDK9 SP100 CDK12 NELFA CARMIL1 U2AF2 SFMBT2 PYHIN1 UBE2O CCNB3 SETBP1 BRD1 USPL1 SON KIF22	7.71e-05	903	110	15	GO:0016604
GeneOntologyCellularComponent	transcription elongation factor complex	CDK9 ELOA CDK12 NELFA	2.16e-04	56	110	4	GO:0008023
GeneOntologyCellularComponent	nuclear speck	CDK12 CARMIL1 U2AF2 SFMBT2 PYHIN1 CCNB3 BRD1 SON KIF22	4.58e-04	431	110	9	GO:0016607
Domain	RuvA_2-like	SRBD1 FANCM KIF22	1.67e-05	9	111	3	IPR010994
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	ELOA RIOK1 UBAP2 DSC1 CDK12 CARMIL1 MATR3 RPS27 NCAPH ZNF512B CSDE1 CRACD UBE2O XRN1 PLCG1 PRKDC NMT1 RPL3 RPL4 TOP2A TP53BP2 SON	4.57e-13	934	115	22	33916271
Pubmed	Nucleolar proteome dynamics.	CDK9 ELOA RPL36 DDX31 RRP1B NOP53 U2AF2 DDX56 RPS27 NSMCE3 PRKDC PLEC RPL3 RPL4 TOP2A RBM34	7.48e-13	419	115	16	15635413
Pubmed	RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.	CDK9 ELOA RPL36 DDX31 RRP1B CDK12 RNPC3 MATR3 U2AF2 DDX56 RPS27 SRBD1 CSDE1 NKTR RPL3 RPL4 TOP2A RBM34 SON	2.56e-12	713	115	19	29802200
Pubmed	TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.	RPL36 RIOK1 DSC1 RRP1B NOP53 NOL12 MATR3 U2AF2 DDX56 RPS27 JPH1 CSDE1 PRKDC GFPT2 PLEC RPL3 HSPA2 RPL4 TOP2A SON KIF22	5.37e-12	949	115	21	36574265
Pubmed	The E3 ubiquitin ligase HECTD1 contributes to cell proliferation through an effect on mitosis.	ELOA DDX31 RRP1B CDK12 NOP53 RNPC3 MATR3 DDX56 RPS27 SRBD1 CSDE1 XRN1 PRKDC RPL4 TOP2A RBM34 SON KIF22	6.81e-11	759	115	18	35915203
Pubmed	MYC multimers shield stalled replication forks from RNA polymerase.	CDK9 ELOA RPL36 DDX31 DSC1 RRP1B NOP53 MATR3 U2AF2 DDX56 RPS27 SRBD1 PDZD8 PRKDC PLEC RPL3 RPL4 TOP2A SON KIF22	8.99e-11	989	115	20	36424410
Pubmed	Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.	RPL36 DSC1 RRP1B CDK12 NOP53 MATR3 U2AF2 DDX56 RPS27 NSMCE3 CRACD NMT1 RPL3 RPL4 TOP2A RBM34 SON	3.26e-10	731	115	17	29298432
Pubmed	Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.	CDK9 RPL36 UBAP2 DDX31 RRP1B NOP53 NOL12 MATR3 U2AF2 DDX56 RPS27 ZNF512B PRKDC RPL3 RPL4 TOP2A RBM34 SON	3.95e-10	847	115	18	35850772
Pubmed	Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.	DDX31 RRP1B NOP53 U2AF2 DDX56 CSDE1 UBE2O SYNE2 XRN1 PRKDC PLEC RPL3 HSPA2 RPL4 RBM34 SON	5.34e-10	653	115	16	22586326
Pubmed	Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.	CDK9 ELOA SP100 RPL36 DSC1 RRP1B NOP53 MATR3 U2AF2 DDX56 RPS27 SRBD1 NCAPH CSDE1 PRKDC PLEC NMT1 RPL3 RPL4 TOP2A RBM34	9.19e-10	1257	115	21	36526897
Pubmed	CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.	ELOA RPL36 DSC1 RRP1B MATR3 U2AF2 DDX56 RPS27 ZNF512B PRKDC BRD1 RPL3 RPL4 TOP2A RBM34	1.65e-09	605	115	15	28977666
Pubmed	WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.	CDK9 RPL36 UBAP2 RRP1B NELFA MATR3 U2AF2 RPS27 SRBD1 PRKDC RPL3 RPL4 TOP2A RBM34 TP53BP2	2.05e-09	615	115	15	31048545
Pubmed	A central chaperone-like role for 14-3-3 proteins in human cells.	CDK9 UBAP2 MATK CARMIL1 MATR3 MAGI3 RPS27 STK32C DNAH7 NEDD4 SYNE2 XRN1 SSH2 PLEC BRD1 PLK4 TP53BP2	3.81e-09	861	115	17	36931259
Pubmed	STING-Mediated IFI16 Degradation Negatively Controls Type I Interferon Production.	ELOA RIOK1 RRP1B NOP53 MATR3 U2AF2 DDX56 SRBD1 RPL3 RPL4 RBM34	9.00e-09	316	115	11	31665637
Pubmed	In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.	ELOA SP100 RPL36 ERCC5 MATR3 U2AF2 MAGI3 SRBD1 NCAPH SFMBT2 ZNF608 SYNE2 STRN4 XRN1 PRKDC PLEC USPL1 RPL3 HSPA2 RPL4 TOP2A	1.03e-08	1442	115	21	35575683
Pubmed	The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.	DDX31 RRP1B NOP53 NOL12 MATR3 U2AF2 RPS27 CSDE1 UBE2O XRN1 PRKDC RPL3 RPL4 TOP2A RBM34 SON	1.08e-08	807	115	16	22681889
Pubmed	Directed proteomic analysis of the human nucleolus.	RRP1B NOP53 U2AF2 DDX56 PRKDC RPL3 HSPA2 RPL4 TOP2A	3.35e-08	208	115	9	11790298
Pubmed	Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.	CDK9 RPL36 RIOK1 ERCC5 RRP1B CARMIL1 MATR3 U2AF2 RPS27 NCAPH CSDE1 UBE2O SYNE2 PRKDC PLEC NMT1 RPL3 RPL4 TOP2A SON	3.95e-08	1415	115	20	28515276
Pubmed	Large-scale characterization of HeLa cell nuclear phosphoproteins.	ELOA ERCC5 CDK12 NELFA MATK PDPK1 CARMIL1 MATR3 NSMCE3 ZNF644 PRKDC PLEC NMT1 TOP2A SON	4.34e-08	774	115	15	15302935
Pubmed	PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.	RPL36 RIOK1 RRP1B CDK12 MATR3 U2AF2 DDX56 RPS27 SRBD1 RPL3 HSPA2 RPL4 RBM34 SON	5.84e-08	678	115	14	30209976
Pubmed	BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.	RIOK1 DDX31 RRP1B MATR3 U2AF2 DDX56 RPS27 NCAPH CSDE1 NKTR PRKDC PLEC RPL3 RPL4 TOP2A RBM34 UQCRFS1P1 SON KIF22	6.64e-08	1318	115	19	30463901
Pubmed	The ubiquitin-specific protease USP36 SUMOylates EXOSC10 and promotes the nucleolar RNA exosome function in rRNA processing.	ELOA RPL36 DDX31 RRP1B NOP53 NOL12 DDX56 PRKDC RPL3 RPL4 TOP2A RBM34	7.61e-08	483	115	12	36912080
Pubmed	A High-Density Human Mitochondrial Proximity Interaction Network.	RPL36 OSTM1 RRP1B NOP53 MATR3 U2AF2 DDX56 JPH1 ZNF512B NBAS ZNF644 SYNE2 STRN4 PDZD8 RPL3 RPL4 TOP2A RBM34 USP33 SON	9.74e-08	1496	115	20	32877691
Pubmed	MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.	CDK9 ELOA RPL36 RRP1B CDK12 RNPC3 NOL12 MATR3 U2AF2 SPOCK2 DDX56 DCX ZNF512B PRKDC PLEC RPL4 SON	1.05e-07	1082	115	17	38697112
Pubmed	The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.	ELOA UBAP2 RRP1B CDK12 NOP53 MATR3 U2AF2 RPS27 NSMCE3 FANCM ZNF512B ZNF644 PRKDC HSPA2 TOP2A SON	1.08e-07	954	115	16	36373674
Pubmed	Identification of proteins associated with ligand-activated estrogen receptor α in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS.	RPL36 RRP1B U2AF2 ZNF512B PRKDC PLEC RPL3 RPL4 TOP2A	1.36e-07	245	115	9	21182205
Pubmed	New interaction partners for Nek4.1 and Nek4.2 isoforms: from the DNA damage response to RNA splicing.	RIOK1 IQCH RRP1B MATR3 RPS27 JPH1 SETBP1 XRN1 PRKDC USPL1 RPL3 HSPA2	1.46e-07	513	115	12	25798074
Pubmed	The histone acetyltransferase KAT6A is recruited to unmethylated CpG islands via a DNA binding winged helix domain.	ELOA RPL36 CDK12 NELFA NOL12 DDX56 SRBD1 RPL3 RPL4 TOP2A RBM34	1.50e-07	417	115	11	36537216
Pubmed	Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.	CDK9 SP100 TCP11L1 ZNF212 NOL12 U2AF2 DDX56 JPH1 ZNF512B KAT2B ZNF608 KMT5B CCNB3 XRN1 BRD1 TOP2A SON	1.63e-07	1116	115	17	31753913
Pubmed	Transferrin Receptor Protein 1 Cooperates with mGluR2 To Mediate the Internalization of Rabies Virus and SARS-CoV-2.	RPL36 DDX31 MATR3 RPS27 SRBD1 KMT2C PRKDC RPL4 TOP2A SON	1.73e-07	333	115	10	36779763
Pubmed	Regulation of epidermal differentiation through KDF1-mediated deubiquitination of IKKα.	MATR3 NCAPH JPH1 XRN1 PRKDC BRD1 RPL3 RPL4	1.77e-07	182	115	8	32239614
Pubmed	The PHLPP1 N-Terminal Extension Is a Mitotic Cdk1 Substrate and Controls an Interactome Switch.	UBAP2 RPS27 NCAPH CSDE1 MYPN XRN1 PRKDC PLEC RPL3	1.97e-07	256	115	9	33397691
Pubmed	Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.	UBAP2 RRP1B CDK12 ZNF212 MATR3 PLXND1 NCAPH ZNF512B KMT2C UBE2O ZNF608 SETBP1	2.02e-07	529	115	12	14621295
Pubmed	H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.	RPL36 RRP1B MTF2 MATR3 U2AF2 DDX56 SRBD1 FANCM ZNF512B KMT2C ZNF644 NKTR PRKDC RPL3 RPL4 TOP2A SON KIF22	2.59e-07	1294	115	18	30804502
Pubmed	Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.	CDK9 RRP1B MATR3 U2AF2 CSDE1 PRKDC RPL3 HSPA2 RPL4 TOP2A KIF22	2.63e-07	441	115	11	31239290
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	UBAP2 CDK12 MATR3 NCAPH CSDE1 KMT2C UBE2O STRN4 XRN1 PRKDC TOP2A TP53BP2	3.00e-07	549	115	12	38280479
Pubmed	Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.	RPL36 RRP1B CDK12 MYPN PLEC RPL3 RPL4 RBM34 SON KIF22	3.64e-07	361	115	10	30344098
Pubmed	High-sensitivity profiling of SARS-CoV-2 noncoding region-host protein interactome reveals the potential regulatory role of negative-sense viral RNA.	RRP1B MATR3 U2AF2 DDX56 SRBD1 CSDE1 XRN1 RPL3 RPL4 TOP2A SON	4.82e-07	469	115	11	37314180
Pubmed	Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.	RPL36 DSC1 MATR3 U2AF2 DDX56 SRBD1 NCAPH CSDE1 XRN1 PLCG1 PRKDC PLEC RPL3 RPL4 TOP2A RBM34 TP53BP2 SON	4.95e-07	1353	115	18	29467282
Pubmed	Phosphoproteome analysis of the human mitotic spindle.	RRP1B NOL12 NCAPH PRKDC PLEC TOP2A SON KIF22	5.26e-07	210	115	8	16565220
Pubmed	Nuclear Functions of Nucleolin through Global Proteomics and Interactomic Approaches.	RPL36 RRP1B NOP53 U2AF2 RPS27 RPL3 RPL4	5.69e-07	145	115	7	27049334
Pubmed	Two-Dimensional Fractionation Method for Proteome-Wide Cross-Linking Mass Spectrometry Analysis.	SP100 RPL36 RRP1B MATR3 RPS27 NCAPH NEDD4 CSDE1 PRKDC PLEC RPL3 HSPA2 RPL4 UQCRFS1P1	8.51e-07	847	115	14	35235311
Pubmed	The in vivo Interaction Landscape of Histones H3.1 and H3.3.	ELOA DDX31 RRP1B MTF2 SRBD1 ZNF512B UBE2O ZNF644 BRD1 TOP2A RBM34 KIF22	8.79e-07	608	115	12	36089195
Pubmed	Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers.	CDK9 ELOA RIOK1 CDK12 RPS27 PLXND1 NEDD4 RHOQ KAT2B GFPT2 SSH2 RPL3 PLK4	9.47e-07	730	115	13	34857952
Pubmed	USP45 and Spindly are part of the same complex implicated in cell migration.	RPL36 PLXND1 CRACD STRN4 PRKDC PLEC RPL3 RPL4	1.23e-06	235	115	8	30258100
Pubmed	The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells.	CDK12 U2AF2 RPS27 PRKDC NMT1 SON	1.34e-06	104	115	6	31365120
Pubmed	Suppression of ACE2 SUMOylation protects against SARS-CoV-2 infection through TOLLIP-mediated selective autophagy.	RPL36 DSC1 RRP1B MATR3 U2AF2 RPS27 CSDE1 PRKDC RPL3 RPL4 TOP2A RBM34	1.52e-06	641	115	12	36057605
Pubmed	Heterozygous deletion of chromosome 17p renders prostate cancer vulnerable to inhibition of RNA polymerase II.	RPL36 MATR3 RPS27 PYHIN1 PRKDC RPL3 RPL4 SON	1.62e-06	244	115	8	30349055
Pubmed	SARS-CoV-2 N Protein Antagonizes Stress Granule Assembly and IFN Production by Interacting with G3BPs to Facilitate Viral Replication.	DSC1 RRP1B NOP53 U2AF2 DDX56 NMT1 RPL3 RPL4	1.67e-06	245	115	8	35652658
Pubmed	Proteomic characterization of chromosomal common fragile site (CFS)-associated proteins uncovers ATRX as a regulator of CFS stability.	RPL36 DSC1 MATR3 NSMCE3 FANCM PRKDC PLEC RPL3 RPL4 TOP2A SON KIF22	1.81e-06	652	115	12	31180492
Pubmed	FOXA1 Directs H3K4 Monomethylation at Enhancers via Recruitment of the Methyltransferase MLL3.	DDX31 NOP53 DDX56 RPS27 DNAH7 KMT2C TOP2A RBM34	1.83e-06	248	115	8	27926873
Pubmed	Genome-wide CRISPR-Cas9 Screen Identifies Leukemia-Specific Dependence on a Pre-mRNA Metabolic Pathway Regulated by DCPS.	RPL36 RRP1B RPS27 PRKDC PLEC RPL3 TOP2A RBM34 SON	2.08e-06	340	115	9	29478914
Pubmed	The multi-subunit GID/CTLH E3 ubiquitin ligase promotes cell proliferation and targets the transcription factor Hbp1 for degradation.	RRP1B PRKDC RPL3 HSPA2 RPL4 TOP2A RBM34 SON	2.12e-06	253	115	8	29911972
Pubmed	Arginine methylation and ubiquitylation crosstalk controls DNA end-resection and homologous recombination repair.	RIOK1 UBAP2 RRP1B MATR3 SRBD1 CSDE1 PRKDC PLEC RPL3 RPL4 RBM34	2.30e-06	551	115	11	34728620
Pubmed	SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.	RPL36 MATR3 DDX56 NKTR PRKDC RPL3 RPL4 SON	2.53e-06	259	115	8	30404004
Pubmed	HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.	ELOA RIOK1 UBAP2 DDX31 RRP1B CDK12 MATR3 TRPM2 U2AF2 DDX56 CSDE1 NKTR PLEC NMT1 RBM34 UQCRFS1P1 SON	2.75e-06	1371	115	17	36244648
Pubmed	Loss of ER retention motif of AGR2 can impact mTORC signaling and promote cancer metastasis.	RPL36 MATR3 U2AF2 RPS27 NBAS TDRD10 PRKDC PLEC NMT1 RPL3 HSPA2 RPL4 UQCRFS1P1	2.85e-06	807	115	13	30575818
Pubmed	Kelch Domain of Gigaxonin Interacts with Intermediate Filament Proteins Affected in Giant Axonal Neuropathy.	RIOK1 CARMIL1 SYNE2 SSH2 PLEC HSPA2 RPL4	3.12e-06	187	115	7	26460568
Pubmed	UM171 Preserves Epigenetic Marks that Are Reduced in Ex Vivo Culture of Human HSCs via Potentiation of the CLR3-KBTBD4 Complex.	RPL36 RIOK1 UBAP2 MATR3 XRN1 PRKDC RPL3 RPL4	3.16e-06	267	115	8	33417871
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	CDK9 RPL36 RRP1B PPFIBP2 MATR3 U2AF2 RPS27 RHOQ ZNF608 XRN1 PRKDC RPL3 RPL4 TOP2A TP53BP2 KIF22	3.62e-06	1247	115	16	27684187
Pubmed	FGF11 induced by hypoxia interacts with HIF-1α and enhances its stability.	MATR3 UBE2O FGF11 RPL3 RPL4 SON	4.48e-06	128	115	6	28027390
Pubmed	Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.	RPL36 RIOK1 DSC1 RRP1B NOP53 MATR3 U2AF2 DDX56 RPS27 NCAPH UBE2O PLCG1 PRKDC RPL3 RPL4 TOP2A RBM34	4.60e-06	1425	115	17	30948266
Pubmed	Human transcription factor protein interaction networks.	RPL36 UBAP2 DDX31 RRP1B NOP53 MATR3 DDX56 ZNF512B KMT2C KAT2B UBE2O ZNF608 ZNF644 SYNE2 XRN1 GFPT2 RBM34	4.77e-06	1429	115	17	35140242
Pubmed	FBW7 suppresses ovarian cancer development by targeting the N6-methyladenosine binding protein YTHDF2.	RPL36 RRP1B MATR3 U2AF2 RPS27 PRKDC PLEC NMT1 RPL3 RPL4 TOP2A	5.26e-06	601	115	11	33658012
Pubmed	Destabilization of Atoh1 by E3 Ubiquitin Ligase Huwe1 and Casein Kinase 1 Is Essential for Normal Sensory Hair Cell Development.	PRKDC PLEC RPL3 RPL4 SON	5.55e-06	76	115	5	27542412
Pubmed	Identification of a USP9X Substrate NFX1-123 by SILAC-Based Quantitative Proteomics.	CDK9 RPL36 DSC1 RRP1B U2AF2 RPS27 PRKDC RPL3 RPL4	5.58e-06	384	115	9	31059266
Pubmed	Comparative Interactomes of VRK1 and VRK3 with Their Distinct Roles in the Cell Cycle of Liver Cancer.	RPL36 MATR3 RPS27 PRKDC RPL3 RPL4 TOP2A	5.71e-06	205	115	7	28927264
Pubmed	Tumor suppressor BAP1 nuclear import is governed by transportin-1.	RPL36 RIOK1 CDK12 TCP11L1 MATR3 U2AF2 RPS27 NCAPH UBE2O PRKDC PLEC NMT1 RPL3 HSPA2 RPL4	6.09e-06	1149	115	15	35446349
Pubmed	Identification and functional characterization of transcriptional activators in human cells.	CDK9 MTF2 KMT2C ZNF608 SYNE2 PRKDC RPL3 HSPA2 RPL4	7.43e-06	398	115	9	35016035
Pubmed	Molecular Characterization of the Oncogene BTF3 and Its Targets in Colorectal Cancer.	RPL36 MATR3 U2AF2 RPS27 CSDE1 RHOQ PRKDC PLEC RPL3 RPL4 TOP2A	7.72e-06	626	115	11	33644029
Pubmed	Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism.	CDK9 ELOA RPL36 MTF2 NELFA MATR3 CRACD NBAS KMT2C KMT5B XRN1 NKTR PLCG1 SSH2 BRD1 RBM34	7.90e-06	1327	115	16	32694731
Pubmed	Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.	RPL36 DDX31 RRP1B TRAPPC8 JPH1 ZNF512B NBAS UBE2O ZNF644 SYNE2 PDZD8 RPL3 HSPA2 RPL4 RBM34 FAM177A1 USP33	8.04e-06	1487	115	17	33957083
Pubmed	The STUbL RNF4 regulates protein group SUMOylation by targeting the SUMO conjugation machinery.	ELOA SP100 RPL36 UBAP2 DSC1 RRP1B CDK12 MATR3 ZNF608 ZNF644 PRKDC PLEC RPL3 RPL4 TOP2A	1.05e-05	1203	115	15	29180619
Pubmed	A novel regulatory mechanism links PLCγ1 to PDK1.	PDPK1 PLCG1	1.08e-05	2	115	2	22454520
Pubmed	Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.	CDK9 RIOK1 CDK12 NOP53 MATR3 U2AF2 DDX56 CSDE1 PLCG1 PRKDC GFPT2	1.14e-05	653	115	11	33742100
Pubmed	The conserved Tpk1 regulates non-homologous end joining double-strand break repair by phosphorylation of Nej1, a homolog of the human XLF.	NOP53 MATR3 DDX56 PRKDC	1.15e-05	42	115	4	34244791
Pubmed	SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.	RPL36 RRP1B MATR3 U2AF2 RPS27 CSDE1 PRKDC PLEC RPL3 RPL4 RBM34	1.18e-05	655	115	11	35819319
Pubmed	TRIM28-mediated nucleocapsid protein SUMOylation enhances SARS-CoV-2 virulence.	RPL36 RRP1B MATR3 U2AF2 DDX56 RPS27 RPL3 RPL4 TOP2A	1.38e-05	430	115	9	38172120
Pubmed	The P-body component USP52/PAN2 is a novel regulator of HIF1A mRNA stability.	RPL36 RIOK1 MATR3 RPS27 PRKDC PLEC RPL3 RPL4	1.42e-05	328	115	8	23398456
Pubmed	Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.	SP100 RRP1B DDX56 XRN1 BRD1 TOP2A RBM34 SON	1.55e-05	332	115	8	25693804
Pubmed	Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.	CDK9 RPL36 RRP1B MATR3 RPS27 CSDE1 STRN4 PLCG1 PRKDC PLEC RPL3 RPL4	1.60e-05	809	115	12	32129710
Pubmed	PIP30/FAM192A is a novel regulator of the nuclear proteasome activator PA28γ.	MATR3 U2AF2 RPS27 PLEC	1.81e-05	47	115	4	29934401
Pubmed	Pro-prion, as a membrane adaptor protein for E3 ligase c-Cbl, facilitates the ubiquitination of IGF-1R, promoting melanoma metastasis.	RNPC3 NSMCE3 NCAPH KMT2C UBE2O STRN4 NKTR GFPT2 SSH2 RBM34 KIF22	1.88e-05	689	115	11	36543142
Pubmed	In silico APC/C substrate discovery reveals cell cycle-dependent degradation of UHRF1 and other chromatin regulators.	RPL36 RIOK1 UBAP2 RRP1B CDK12 MATR3 U2AF2 RPS27 CSDE1 KAT2B UBE2O RBM34 KIF22	2.04e-05	971	115	13	33306668
Pubmed	Global landscape of HIV-human protein complexes.	CDK9 NOL12 MATR3 CSDE1 UBE2O CTNNA3 PRKDC NMT1 TOP2A	2.22e-05	457	115	9	22190034
Pubmed	Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.	MAGI3 SPOCK2 ZNF365 JPH1 ZNF512B CSDE1 UBE2O PDZD8 PLCG1 PRKDC GFPT2 PLEC USPL1 HSPA2 USP33	2.27e-05	1285	115	15	35914814
Pubmed	BioID-based intact cell interactome of the Kv1.3 potassium channel identifies a Kv1.3-STAT3-p53 cellular signaling pathway.	RIOK1 CARMIL1 MAGI3 RPS27 JPH1 CSDE1 XRN1 PDZD8 PRKDC RPL3 RPL4	2.41e-05	708	115	11	39231216
Pubmed	Quantitative Proteomics Reveals Dynamic Interactions of the Minichromosome Maintenance Complex (MCM) in the Cellular Response to Etoposide Induced DNA Damage.	DSC1 TCP11L1 MATR3 U2AF2 RPS27 MYPN PRKDC PLEC NMT1 RPL3 HSPA2 TOP2A	2.42e-05	844	115	12	25963833
Pubmed	NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.	DDX56 TRAPPC8 ZNF512B ZNF644 TOP2A	2.45e-05	103	115	5	32744500
Pubmed	BPA modulates the WDR5/TET2 complex to regulate ERβ expression in eutopic endometrium and drives the development of endometriosis.	UBAP2 MATR3 U2AF2 KMT2C UBE2O PRKDC PLEC NMT1 RPL3 RPL4 RBM34	2.51e-05	711	115	11	33022573
Pubmed	Functional proteomics mapping of a human signaling pathway.	MTF2 CDK12 RNPC3 U2AF2 NEDD4 ZNF512B PLEC BRD1 TP53BP2 SON	2.81e-05	591	115	10	15231748
Pubmed	SR protein kinases promote splicing of nonconsensus introns.	RRP1B CDK12 NOP53 PPFIBP2 MATR3 SFMBT2 PRKDC SON	2.81e-05	361	115	8	26167880
Pubmed	Functional proteomic analysis of human nucleolus.	DDX31 RRP1B NOP53 DDX56 RBM34	2.81e-05	106	115	5	12429849
Pubmed	Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.	RPL36 RRP1B MATR3 U2AF2 RPS27 CSDE1 PRKDC RPL3 RPL4 RBM34 SON	2.99e-05	725	115	11	27025967
Pubmed	PINK1 Content in Mitochondria is Regulated by ER-Associated Degradation.	UBAP2 DSC1 MATR3 UBE2O NKTR PRKDC PLEC HSPA2 SON	3.10e-05	477	115	9	31300519
Pubmed	Analysis of HIV-1 Gag protein interactions via biotin ligase tagging.	UBAP2 CSDE1 XRN1 PRKDC	3.16e-05	54	115	4	25631074
Pubmed	Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.	PMS2P2 PPFIBP2 CARMIL1 TRPM2 U2AF2 MAGI3 DDX56 STK32C SFMBT2 PKNOX2 CSDE1 KMT2C ZNF608 SETBP1 PLCG1 GULP1	3.23e-05	1489	115	16	28611215
Pubmed	Condensin confers the longitudinal rigidity of chromosomes.	NCAPH TOP2A	3.24e-05	3	115	2	25961503
Pubmed	Determination of the Plk4/Sak consensus phosphorylation motif using peptide spots arrays.	CCNB3 PLK4	3.24e-05	3	115	2	17174311
Pubmed	Oxidative stress mediates the disruption of airway epithelial tight junctions through a TRPM2-PLCγ1-PKCα signaling pathway.	TRPM2 PLCG1	3.24e-05	3	115	2	23629676
Interaction	RPL13 interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NOL12 MATR3 DDX56 RPS27 NCAPH UBE2O XRN1 PDZD8 FGF11 NKTR RPL3 RPL4 TOP2A RBM34 SON	5.13e-11	700	114	22	int:RPL13
Interaction	FBL interactions	ELOA SP100 RIOK1 UBAP2 DDX31 RRP1B NOP53 MATR3 U2AF2 DDX56 ZNF512B CSDE1 UBE2O ZNF644 FGF11 BRD1 NMT1 RPL3 RPL4 TOP2A RBM34	6.58e-11	639	114	21	int:FBL
Interaction	RPL8 interactions	SP100 RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 MATR3 DDX56 RPS27 NCAPH PYHIN1 UBE2O XRN1 PDZD8 RPL3 RPL4 TOP2A RBM34	1.84e-10	539	114	19	int:RPL8
Interaction	RPL4 interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NOL12 MATR3 DDX56 RPS27 SRBD1 NCAPH PYHIN1 CSDE1 XRN1 PDZD8 FGF11 RPL3 RPL4 TOP2A RBM34	2.71e-10	764	114	22	int:RPL4
Interaction	RPL10A interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B NOP53 MATR3 U2AF2 RPS27 NCAPH CSDE1 UBE2O XRN1 PDZD8 RPL3 RPL4 TOP2A RBM34	3.01e-10	490	114	18	int:RPL10A
Interaction	RPS6 interactions	CDK9 ELOA RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NOL12 MATR3 DDX56 RPS27 NCAPH PYHIN1 ZNF512B UBE2O XRN1 PDZD8 RPL3 RPL4 TOP2A RBM34 TP53BP2	5.80e-10	874	114	23	int:RPS6
Interaction	RPL18A interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 U2AF2 DDX56 RPS27 SRBD1 NCAPH NEDD4 PDZD8 RPL3 RPL4 RBM34	5.81e-10	447	114	17	int:RPL18A
Interaction	H1-4 interactions	CDK9 SP100 RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 DDX56 PLXND1 NCAPH PYHIN1 ZNF512B XRN1 PDZD8 NMT1 RPL3 RPL4 RBM34 KIF22	7.34e-10	656	114	20	int:H1-4
Interaction	RPS24 interactions	ELOA RPL36 RIOK1 DDX31 RRP1B NOP53 U2AF2 DDX56 RPS27 NCAPH PYHIN1 UBE2O ZNF644 PDZD8 RPL3 RPL4 TOP2A RBM34	1.02e-09	529	114	18	int:RPS24
Interaction	RPL31 interactions	CDK9 ELOA RPL36 RIOK1 ERCC5 DDX31 RRP1B NOP53 NOL12 DDX56 RPS27 NCAPH ZNF512B UBE2O PDZD8 NMT1 RPL3 RPL4 TOP2A RBM34	1.36e-09	680	114	20	int:RPL31
Interaction	SRSF6 interactions	RIOK1 DDX31 RRP1B CDK12 NOP53 RNPC3 NOL12 U2AF2 DDX56 SRBD1 UBE2O XRN1 NKTR RPL3 RPL4 RBM34 SON	3.45e-09	503	114	17	int:SRSF6
Interaction	ZNF330 interactions	CDK9 ELOA RIOK1 DDX31 RRP1B MTF2 NOP53 DDX56 SRBD1 ZNF512B UBE2O ZNF644 BRD1 TOP2A RBM34 KIF22	4.49e-09	446	114	16	int:ZNF330
Interaction	RPL18 interactions	CDK9 RPL36 RIOK1 MATR3 U2AF2 DDX56 RPS27 NCAPH UBE2O ZNF644 STRN4 PDZD8 FGF11 RPL3 RPL4 TOP2A RBM34	4.50e-09	512	114	17	int:RPL18
Interaction	ZNF668 interactions	RPL36 DDX31 RRP1B NOP53 NOL12 MATR3 DDX56 XRN1 RPL3 RPL4 RBM34 KIF22	5.96e-09	226	114	12	int:ZNF668
Interaction	MAGEB2 interactions	RPL36 DDX31 RRP1B CDK12 NOP53 RNPC3 NOL12 DDX56 SRBD1 XRN1 NKTR RPL3 RPL4 RBM34	1.10e-08	349	114	14	int:MAGEB2
Interaction	CHD4 interactions	ELOA DSC1 RRP1B MTF2 PDPK1 MATR3 U2AF2 DDX56 RPS27 TRAPPC8 NCAPH PYHIN1 ZNF512B UBE2O ZNF644 XRN1 PRKDC BRD1 RPL3 RPL4 TOP2A RBM34	1.19e-08	938	114	22	int:CHD4
Interaction	ZC3H18 interactions	RPL36 DSC1 RRP1B CDK12 NOP53 MATR3 U2AF2 DDX56 RPS27 NSMCE3 PYHIN1 CRACD FGF11 NKTR BRD1 NMT1 RPL3 RPL4 TOP2A RBM34 SON	1.89e-08	877	114	21	int:ZC3H18
Interaction	RPL28 interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B CDK12 MATR3 DDX56 SRBD1 NCAPH ZNF644 PDZD8 RPL3 RPL4 TOP2A RBM34	1.89e-08	494	114	16	int:RPL28
Interaction	RPL26L1 interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 MATR3 SRBD1 UBE2O AUNIP BRD1 RPL3 RPL4 RBM34	2.12e-08	431	114	15	int:RPL26L1
Interaction	SRSF1 interactions	RPL36 RIOK1 DDX31 RRP1B CDK12 NELFA NOP53 NOL12 MATR3 U2AF2 DDX56 PRKDC RPL3 RPL4 TOP2A RBM34 SON	2.19e-08	570	114	17	int:SRSF1
Interaction	NAA40 interactions	ELOA RIOK1 UBAP2 DSC1 CDK12 CARMIL1 MATR3 RPS27 NCAPH ZNF512B CSDE1 CRACD UBE2O XRN1 PLCG1 PRKDC NMT1 RPL3 RPL4 TOP2A TP53BP2 SON	2.52e-08	978	114	22	int:NAA40
Interaction	SNRNP70 interactions	CDK9 ELOA RPL36 RIOK1 DDX31 RRP1B CDK12 RNPC3 MATR3 U2AF2 DDX56 RPS27 SRBD1 PYHIN1 CSDE1 UBE2O NKTR RPL3 RPL4 TOP2A RBM34 SON	2.81e-08	984	114	22	int:SNRNP70
Interaction	RPS3A interactions	CDK9 RPL36 RIOK1 DDX31 NOP53 RNPC3 NOL12 MATR3 U2AF2 DDX56 RPS27 NCAPH NEDD4 PDZD8 RPL3 RPL4 TOP2A RBM34	2.83e-08	655	114	18	int:RPS3A
Interaction	CENPA interactions	CDK9 ERCC5 DDX31 RRP1B MTF2 NOP53 DDX56 SRBD1 ZNF512B ZNF644 PRKDC TOP2A RBM34 KIF22	2.91e-08	377	114	14	int:CENPA
Interaction	GTPBP4 interactions	SP100 RPL36 RIOK1 RRP1B NOP53 NOL12 MATR3 DDX56 PYHIN1 UBE2O PRKDC RPL3 HSPA2 RPL4 RBM34	3.05e-08	443	114	15	int:GTPBP4
Interaction	SIRT7 interactions	CDK9 DDX31 RRP1B NOP53 U2AF2 DDX56 CSDE1 KAT2B UBE2O SYNE2 XRN1 PRKDC PLEC RPL3 HSPA2 RPL4 TOP2A RBM34 SON	3.58e-08	744	114	19	int:SIRT7
Interaction	RPL13A interactions	RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NOL12 MATR3 DDX56 RPS27 NCAPH XRN1 PDZD8 NKTR RPL3 RPL4 RBM34	3.71e-08	591	114	17	int:RPL13A
Interaction	RPL7A interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 MATR3 DDX56 RPS27 NCAPH PYHIN1 UBE2O SYNE2 PDZD8 RPL3 RPL4 RBM34	4.89e-08	679	114	18	int:RPL7A
Interaction	RPL23A interactions	CDK9 SP100 RPL36 RIOK1 DDX31 RRP1B NOP53 DDX56 RPS27 NCAPH PYHIN1 UBE2O PDZD8 NMT1 RPL3 RPL4 RBM34	5.33e-08	606	114	17	int:RPL23A
Interaction	RPL14 interactions	RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NOL12 MATR3 DDX56 RPS27 NCAPH XRN1 RPL3 RPL4 TOP2A RBM34	9.20e-08	554	114	16	int:RPL14
Interaction	RPL19 interactions	SP100 RPL36 RIOK1 DDX31 NOP53 NOL12 RPS27 NCAPH PYHIN1 UBE2O PDZD8 FGF11 NMT1 RPL3 RPL4 TOP2A RBM34	1.11e-07	638	114	17	int:RPL19
Interaction	DGCR8 interactions	DDX31 RRP1B CDK12 NOP53 U2AF2 DDX56 UBE2O PRKDC RPL3 RPL4 RBM34	1.29e-07	242	114	11	int:DGCR8
Interaction	HECTD1 interactions	ELOA DDX31 RRP1B CDK12 NOP53 RNPC3 MATR3 U2AF2 DDX56 RPS27 SRBD1 NCAPH CSDE1 XRN1 PRKDC SSH2 RPL4 TOP2A RBM34 SON KIF22	1.33e-07	984	114	21	int:HECTD1
Interaction	RPL36 interactions	RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NCAPH PYHIN1 UBE2O PDZD8 NKTR RPL3 RPL4 TOP2A RBM34	1.64e-07	504	114	15	int:RPL36
Interaction	RPL7L1 interactions	RPL36 RIOK1 DDX31 RRP1B NOP53 DDX56 PYHIN1 RPL3 RPL4 RBM34	2.36e-07	203	114	10	int:RPL7L1
Interaction	RPA4 interactions	RPL36 ERCC5 UBAP2 MATR3 U2AF2 RPS27 NCAPH CSDE1 STRN4 RPL3 RPL4 TOP2A TP53BP2 SON	2.70e-07	452	114	14	int:RPA4
Interaction	MEN1 interactions	CDK9 RPL36 UBAP2 DDX31 RRP1B NOP53 NOL12 MATR3 U2AF2 DDX56 SRBD1 ZNF512B KMT2C ZNF608 ZNF644 SETBP1 RPL3 RPL4 TOP2A RBM34 SON	2.80e-07	1029	114	21	int:MEN1
Interaction	RPL15 interactions	CDK9 RPL36 RIOK1 CDK12 MATR3 U2AF2 RPS27 NCAPH UBE2O PDZD8 NKTR RPL3 RPL4 TOP2A RBM34	3.11e-07	530	114	15	int:RPL15
Interaction	RPL37A interactions	RPL36 DDX31 CDK12 NOP53 U2AF2 DDX56 NCAPH UBE2O SYNE2 PDZD8 RPL3 RPL4 RBM34	3.34e-07	391	114	13	int:RPL37A
Interaction	CIT interactions	CDK9 GAD1 RPL36 DDX31 RRP1B NOP53 MATR3 U2AF2 MAGI3 DDX56 PLXND1 SRBD1 SYT10 PYHIN1 NBAS SYNE2 NKTR PRKDC SSH2 PLEC RPL3 HSPA2 RPL4 TOP2A SON	4.21e-07	1450	114	25	int:CIT
Interaction	RPL10 interactions	RPL36 RIOK1 DDX31 NOP53 MATR3 DDX56 RPS27 NCAPH PYHIN1 UBE2O PDZD8 BRD1 RPL3 RPL4 TOP2A RBM34 KIF22	4.29e-07	702	114	17	int:RPL10
Interaction	RPL30 interactions	CDK9 RPL36 RIOK1 DDX31 NOP53 DDX56 RPS27 NCAPH XRN1 PDZD8 RPL3 RPL4 TOP2A RBM34	4.79e-07	474	114	14	int:RPL30
Interaction	SRSF5 interactions	RPL36 RIOK1 DDX31 CDK12 NOP53 NOL12 U2AF2 MAGI3 DDX56 UBE2O RPL3 RPL4 RBM34 SON	4.79e-07	474	114	14	int:SRSF5
Interaction	RSL1D1 interactions	RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 MATR3 PYHIN1 RHOQ UBE2O NKTR RPL3 RPL4 RBM34	5.42e-07	479	114	14	int:RSL1D1
Interaction	MYCN interactions	RPL36 DDX31 DSC1 RRP1B CDK12 NOP53 NOL12 MATR3 U2AF2 RNF13 RPS27 ODC1 SRBD1 NEDD4 ZNF512B CSDE1 KAT2B PRKDC RPL3 HSPA2 RPL4 RBM34 UQCRFS1P1 SON	5.88e-07	1373	114	24	int:MYCN
Interaction	NHLH1 interactions	DDX31 RRP1B NOP53 DDX56 UBE2O ZNF644 RBM34	6.70e-07	88	114	7	int:NHLH1
Interaction	NOP2 interactions	CDK9 RPL36 DDX31 CDK12 NOP53 NOL12 MATR3 DDX56 FGF11 RPL3 RPL4 TOP2A RBM34	6.73e-07	416	114	13	int:NOP2
Interaction	H3C1 interactions	CDK9 ELOA RPL36 RIOK1 DDX31 RRP1B SRBD1 ZNF512B KMT2C KAT2B CCNB3 ZNF644 PRKDC BRD1 RPL3 TOP2A RBM34 JHY KIF22	6.87e-07	901	114	19	int:H3C1
Interaction	MECP2 interactions	CDK9 ELOA SP100 RPL36 DDX31 RRP1B CDK12 RNPC3 NOL12 MATR3 U2AF2 SPOCK2 DDX56 SRBD1 DCX PYHIN1 ZNF512B NKTR PRKDC PLEC RPL3 RPL4 SON	7.22e-07	1287	114	23	int:MECP2
Interaction	RPS8 interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NOL12 DDX56 RPS27 NCAPH PDZD8 RPL3 RPL4 TOP2A RBM34	7.67e-07	649	114	16	int:RPS8
Interaction	ABT1 interactions	RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 NOL12 DDX56 SRBD1 UBE2O RPL3 RPL4 RBM34	8.11e-07	423	114	13	int:ABT1
Interaction	H2BC8 interactions	ELOA RIOK1 ERCC5 DDX31 MTF2 NELFA DDX56 SRBD1 ZNF512B UBE2O ZNF644 BRD1 TOP2A RBM34 KIF22	8.89e-07	576	114	15	int:H2BC8
Interaction	RPS2 interactions	CDK9 RPL36 RIOK1 NOP53 NOL12 MATR3 DDX56 RPS27 NCAPH PYHIN1 UBE2O PDZD8 RPL3 RPL4 TOP2A RBM34	9.01e-07	657	114	16	int:RPS2
Interaction	RPLP0 interactions	CDK9 RPL36 RIOK1 DDX31 RRP1B CDK12 NOP53 DDX56 RPS27 NCAPH UBE2O XRN1 PDZD8 RPL3 RPL4 RBM34	9.57e-07	660	114	16	int:RPLP0
Interaction	LHX2 interactions	DDX31 RRP1B NOP53 TCP11L1 DDX56 ZNF512B KMT2C ZNF644 RBM34	9.85e-07	183	114	9	int:LHX2
Interaction	PARP1 interactions	CDK9 ELOA UBAP2 DDX31 RRP1B MTF2 NOP53 U2AF2 DDX56 SRBD1 NCAPH ZNF365 PYHIN1 ZNF512B KAT2B UBE2O ZNF644 PRKDC RPL3 HSPA2 TOP2A RBM34 KIF22	1.06e-06	1316	114	23	int:PARP1
Interaction	TNIP1 interactions	ELOA RPL36 RIOK1 DSC1 RRP1B NOP53 NOL12 MATR3 U2AF2 DDX56 RPS27 JPH1 CSDE1 PRKDC GFPT2 PLEC RPL3 HSPA2 RPL4 TOP2A SON KIF22	1.09e-06	1217	114	22	int:TNIP1
Interaction	EIF6 interactions	RPL36 DDX31 RRP1B NOP53 DDX56 NEDD4 FGF11 RPL3 RPL4 TOP2A RBM34 USP33	1.09e-06	365	114	12	int:EIF6
Interaction	CHD3 interactions	ELOA RPL36 RIOK1 RRP1B MTF2 MATR3 U2AF2 DDX56 RPS27 ZNF512B PRKDC BRD1 RPL3 RPL4 PLK4 TOP2A RBM34	1.21e-06	757	114	17	int:CHD3
Interaction	RC3H1 interactions	RPL36 RIOK1 RRP1B CDK12 MATR3 U2AF2 DDX56 RPS27 SRBD1 NCAPH CSDE1 XRN1 RPL3 HSPA2 RPL4 RBM34	1.33e-06	677	114	16	int:RC3H1
Interaction	SRPK3 interactions	DDX31 RRP1B NOP53 U2AF2 DDX56 RPL3 TOP2A RBM34 SON	1.35e-06	190	114	9	int:SRPK3
Interaction	PRPF19 interactions	ELOA RIOK1 ERCC5 U2AF2 NCAPH UBE2O STRN4 FGF11 NKTR PRKDC TOP2A TP53BP2 SON	1.62e-06	450	114	13	int:PRPF19
Interaction	KRR1 interactions	RIOK1 DDX31 RRP1B NOP53 NOL12 DDX56 UBE2O PLEC RPL3 RPL4 RBM34 USP33	1.62e-06	379	114	12	int:KRR1
Interaction	RPL27A interactions	CDK9 RPL36 RIOK1 DDX31 RPS27 SRBD1 NCAPH UBE2O PDZD8 FGF11 RPL3 RPL4 TOP2A	2.01e-06	459	114	13	int:RPL27A
Interaction	CCDC137 interactions	RPL36 DDX31 RRP1B NOP53 NOL12 DDX56 RPL3 RPL4 RBM34	2.06e-06	200	114	9	int:CCDC137
Interaction	RRP8 interactions	RPL36 DDX31 RRP1B NOP53 NOL12 DDX56 SRBD1 RPL3 RPL4 RBM34	2.18e-06	259	114	10	int:RRP8
Interaction	NPM3 interactions	CDK9 DDX31 RRP1B NOP53 NOL12 DDX56 XRN1 RPL3 RPL4 RBM34	2.41e-06	262	114	10	int:NPM3
Interaction	RBM4B interactions	DDX31 NOP53 MATR3 DDX56 XRN1 RPL3 RPL4 TOP2A RBM34 SON	2.41e-06	262	114	10	int:RBM4B
Interaction	IFI16 interactions	ELOA SP100 RIOK1 RRP1B NOP53 MATR3 U2AF2 DDX56 SRBD1 XRN1 BRD1 RPL3 RPL4 TOP2A RBM34 SON	2.65e-06	714	114	16	int:IFI16
Interaction	SRPK2 interactions	CDK9 DDX31 RRP1B CDK12 NOP53 RNPC3 MATR3 U2AF2 DDX56 PYHIN1 NKTR RPL3 RPL4 TOP2A RBM34 SON	2.80e-06	717	114	16	int:SRPK2
Interaction	COIL interactions	CDK9 ELOA RIOK1 DDX31 NELFA DDX56 RPS27 SRBD1 ZNF512B ZNF644 USPL1 RPL3 TOP2A RBM34	2.88e-06	552	114	14	int:COIL
Interaction	RPL3 interactions	RPL36 RIOK1 DDX31 RRP1B NOP53 MATR3 DDX56 RPS27 NCAPH XRN1 PDZD8 FGF11 RPL3 RPL4 TOP2A RBM34	3.06e-06	722	114	16	int:RPL3
Interaction	SNRNP40 interactions	DDX31 RRP1B CDK12 NOP53 RNPC3 U2AF2 DDX56 SRBD1 ZNF608 ZNF644 PDZD8 NKTR RPL3 TOP2A SON	3.08e-06	637	114	15	int:SNRNP40
Interaction	RPS16 interactions	CDK9 RPL36 RIOK1 RRP1B NOL12 DDX56 RPS27 SRBD1 NCAPH XRN1 PDZD8 NMT1 RPL3 RPL4 TOP2A SON	3.17e-06	724	114	16	int:RPS16
Interaction	RPS19 interactions	CDK9 SP100 RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 DDX56 RPS27 NCAPH UBE2O PDZD8 RPL3 RPL4	3.20e-06	639	114	15	int:RPS19
Interaction	RPL35 interactions	RPL36 RIOK1 DDX31 RRP1B NOP53 DDX56 RPS27 NCAPH UBE2O PDZD8 RPL3 RPL4 TOP2A RBM34	3.26e-06	558	114	14	int:RPL35
Interaction	NPM1 interactions	CDK9 RPL36 DDX31 RRP1B NOP53 NOL12 U2AF2 DDX56 RPS27 NCAPH SYNE2 PDZD8 PLCG1 PRKDC BRD1 RPL3 RPL4 TOP2A RBM34 SON KIF22	3.36e-06	1201	114	21	int:NPM1
Interaction	ADARB1 interactions	DDX31 RRP1B CDK12 NOP53 NOL12 U2AF2 DDX56 NKTR PLEC RPL3 RPL4 TOP2A RBM34	4.02e-06	489	114	13	int:ADARB1
Interaction	RPL11 interactions	RPL36 RIOK1 DDX31 RRP1B NOP53 NOL12 DDX56 RPS27 NCAPH UBE2O PDZD8 RPL3 RPL4 TOP2A RBM34	4.08e-06	652	114	15	int:RPL11
Interaction	RPL7 interactions	CDK9 RPL36 RIOK1 CDK12 NOP53 MATR3 RPS27 NCAPH PYHIN1 PDZD8 RPL3 RPL4 TOP2A	4.20e-06	491	114	13	int:RPL7
Interaction	RRS1 interactions	CDK9 RPL36 RRP1B CDK12 NOP53 MATR3 U2AF2 DDX56 RPL3 RPL4 RBM34	4.22e-06	345	114	11	int:RRS1
Interaction	CCDC140 interactions	RPL36 DDX31 SRBD1 UBE2O RPL3 RPL4 RBM34	4.57e-06	117	114	7	int:CCDC140
Interaction	H3C3 interactions	ELOA RIOK1 DDX31 RRP1B MTF2 SRBD1 ZNF512B UBE2O ZNF644 BRD1 TOP2A RBM34 KIF22	4.58e-06	495	114	13	int:H3C3
Interaction	RPL29 interactions	SP100 RPL36 RIOK1 DDX56 NCAPH PYHIN1 RHOQ PDZD8 RPL4 TOP2A	4.64e-06	282	114	10	int:RPL29
Interaction	WWP2 interactions	CDK9 RPL36 UBAP2 RRP1B NELFA MATR3 U2AF2 RPS27 SRBD1 CSDE1 RHOQ PRKDC RPL3 RPL4 TOP2A RBM34 TP53BP2	4.92e-06	840	114	17	int:WWP2
Interaction	PURG interactions	DDX31 RRP1B CDK12 NOP53 RNPC3 DDX56 XRN1 NKTR RBM34	5.02e-06	223	114	9	int:PURG
Interaction	RPS11 interactions	CDK9 RPL36 RIOK1 MATR3 DDX56 RPS27 NCAPH UBE2O PRKDC BRD1 RPL3 RPL4 TOP2A	5.69e-06	505	114	13	int:RPS11
Interaction	TMPO interactions	CDK9 MATR3 U2AF2 NCAPH PYHIN1 JPH1 RHOQ NBAS UBE2O SYNE2 PDZD8 PRKDC BRD1 RPL3 RPL4 USP33	6.06e-06	762	114	16	int:TMPO
Interaction	YWHAG interactions	CDK9 UBAP2 CDK12 PPFIBP2 PDPK1 CARMIL1 MATR3 MAGI3 RPS27 DNAH7 NEDD4 PYHIN1 CRACD SYNE2 NKTR PRKDC SSH2 BRD1 PLK4 TP53BP2 SON	6.10e-06	1248	114	21	int:YWHAG
Interaction	RNF151 interactions	DDX31 NOP53 DDX56 NKTR RPL3 RPL4 RBM34	6.37e-06	123	114	7	int:RNF151
Interaction	RPS9 interactions	CDK9 RPL36 RIOK1 NOP53 MATR3 DDX56 RPS27 NCAPH PDZD8 RPL3 RPL4 TOP2A RBM34	7.03e-06	515	114	13	int:RPS9
Interaction	USP36 interactions	ELOA RPL36 DDX31 RRP1B NOP53 NOL12 DDX56 NEDD4 PRKDC RPL3 HSPA2 RPL4 TOP2A RBM34	7.34e-06	599	114	14	int:USP36
Interaction	RPSA interactions	CDK9 RPL36 RIOK1 DDX31 NOP53 NOL12 RPS27 NCAPH NEDD4 UBE2O PDZD8 RPL3 RPL4	8.12e-06	522	114	13	int:RPSA
Interaction	SENP3 interactions	RRP1B PDPK1 MATR3 NSMCE3 NCAPH PYHIN1 CSDE1 FGF11 RPL3 RPL4	8.23e-06	301	114	10	int:SENP3
Interaction	RPL5 interactions	RPL36 RIOK1 RRP1B NOP53 DDX56 RPS27 NCAPH UBE2O XRN1 PDZD8 RPL3 RPL4 RBM34 SON	8.37e-06	606	114	14	int:RPL5
Interaction	LYAR interactions	ELOA RIOK1 DDX31 NOP53 NOL12 DDX56 PYHIN1 BRD1 RPL3 RPL4 RBM34	8.83e-06	373	114	11	int:LYAR
Interaction	NUP43 interactions	ERCC5 DDX31 DSC1 RRP1B CDK12 NOP53 ZNF608 ZNF644 SYNE2 NKTR RPL3 TOP2A SON AFG1L	1.18e-05	625	114	14	int:NUP43
Interaction	CTCF interactions	SP100 RPL36 RRP1B NOP53 U2AF2 RPS27 PYHIN1 PRKDC BRD1 RPL3 RPL4 TOP2A	1.19e-05	461	114	12	int:CTCF
Interaction	DOT1L interactions	CDK9 RPL36 UBAP2 DDX31 RRP1B NOP53 NOL12 MATR3 DDX56 RPS27 ZNF512B PRKDC RPL3 TOP2A RBM34 SON	1.24e-05	807	114	16	int:DOT1L
Interaction	YWHAH interactions	CDK9 UBAP2 PPFIBP2 PDPK1 CARMIL1 MATR3 MAGI3 RPS27 DNAH7 NEDD4 PYHIN1 SYNE2 XRN1 NKTR SSH2 PLEC BRD1 PLK4 TP53BP2	1.28e-05	1102	114	19	int:YWHAH
GeneFamily	PHD finger proteins	SP100 MTF2 KMT2C BRD1	3.46e-04	90	67	4	88
GeneFamily	L ribosomal proteins	RPL36 RPL3 RPL4	8.92e-04	51	67	3	729
Coexpression	KIM_WT1_TARGETS_8HR_UP	DOK5 PLXND1 RHOQ STRN4 GFPT2 PLEC SON	9.24e-06	167	115	7	M8857
Coexpression	BUSSLINGER_ESOPHAGEAL_QUIESCENT_BASAL_CELLS	NOP53 SYNE2 RPL3 HSPA2 RPL4	2.29e-05	77	115	5	M40001
Coexpression	BUSSLINGER_GASTRIC_IMMUNE_CELLS	OSTM1 NOP53 MATK MATR3 SPOCK2 RPS27 ODC1 TRAPPC8 SFMBT2 PYHIN1 CSDE1 KMT2C KAT2B ZNF644 XRN1 PLCG1 SSH2 RPL4 SON	2.59e-05	1492	115	19	M40023
Coexpression	GSE11057_PBMC_VS_MEM_CD4_TCELL_DN	RRP1B SPOCK2 NSMCE3 ZNF512B PLCG1 RPL3 KIF22	2.78e-05	198	115	7	M3121
Coexpression	GSE3039_CD4_TCELL_VS_B1_BCELL_UP	CDK12 NOP53 CARMIL1 STK32C NCAPH UBE2O RPL3	2.96e-05	200	115	7	M6466
Coexpression	WIERENGA_PML_INTERACTOME	RPS27 PRKDC PLEC RPL3	3.46e-05	42	115	4	M2219
Coexpression	GOLDRATH_ANTIGEN_RESPONSE	SP100 ODC1 FANCM NCAPH RHOQ HSPA2 PLK4 TOP2A KIF22	3.50e-05	366	115	9	M11884
Coexpression	GOLDRATH_ANTIGEN_RESPONSE	SP100 ODC1 FANCM NCAPH RHOQ HSPA2 PLK4 TOP2A KIF22	6.56e-05	397	115	9	MM1255
Coexpression	MURARO_PANCREAS_BETA_CELL	OSTM1 MATR3 RNF13 TRAPPC8 CSDE1 RHOQ CRACD KMT2C KAT2B SETBP1 SYNE2 PDZD8 RPL3 RPL4	6.98e-05	946	115	14	M39169
Coexpression	MARSON_BOUND_BY_E2F4_UNSTIMULATED	UBAP2 MATR3 FANCM NCAPH TYW1B CTNNA3 PRKDC RPL3 RPL4 PLK4 TOP2A KIF22	7.26e-05	714	115	12	M1744
Coexpression	TABULA_MURIS_SENIS_LIVER_ENDOTHELIAL_CELL_OF_HEPATIC_SINUSOID_AGEING	SP100 RPL36 NOP53 RPS27 NEDD4 PYHIN1 CSDE1 RPL3 RPL4	9.71e-05	418	115	9	MM3752
Coexpression	DACOSTA_UV_RESPONSE_VIA_ERCC3_DN	DOK5 SP100 MTF2 RNF13 TRAPPC8 MBOAT2 NEDD4 NBAS MGAT5 SYNE2 TOP2A TP53BP2 SON	9.97e-05	856	115	13	M4500
Coexpression	TABULA_MURIS_SENIS_HEART_AND_AORTA_FIBROBLAST_OF_CARDIAC_TISSUE_AGEING	RPL36 NOP53 RPS27 PYHIN1 GFPT2 PLEC RPL3 RPL4	1.00e-04	327	115	8	MM3714
Coexpression	ZHANG_UTERUS_C8_NK_CELL	SP100 RPL36 NOP53 RPS27 RPL3 RPL4	1.00e-04	168	115	6	MM16614
Coexpression	GSE25677_MPL_VS_R848_STIM_BCELL_UP	MATK CARMIL1 TRPM2 PLXND1 NEDD4 PRKDC	1.21e-04	174	115	6	M8186
Coexpression	OSMAN_BLADDER_CANCER_DN	RPL36 CDK12 NOP53 RPS27 CSDE1 KMT5B ZNF506 RPL3 RPL4	1.22e-04	431	115	9	M16858
Coexpression	NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_3DY_DN	RRP1B CDK12 SPOCK2 ZNF512B MGAT5 PDZD8 NKTR USPL1 SON	1.24e-04	432	115	9	M41149
Coexpression	GRYDER_PAX3FOXO1_ENHANCERS_KO_DOWN	RRP1B SFMBT2 MEIS1 RHOQ ZNF644 SETBP1 XRN1 KANK4 PLCG1	1.38e-04	438	115	9	M227
Coexpression	BUSSLINGER_DUODENAL_IMMUNE_CELLS	RPL36 OSTM1 NOP53 MATR3 SPOCK2 RPS27 SFMBT2 SYNE2 NKTR PRKDC RPL3 RPL4 SON	1.84e-04	911	115	13	M40038
Coexpression	NAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_3DY_NEGATIVE	MTF2 CDK12 MATR3 ZNF512B SYNE2 NKTR BRD1 USPL1	2.05e-04	363	115	8	M41103
Coexpression	FUJII_YBX1_TARGETS_DN	ODC1 NCAPH JPH1 PRKDC PLK4 TOP2A	2.19e-04	194	115	6	M14340
Coexpression	GSE11057_CD4_CENT_MEM_VS_PBMC_DN	TRPM2 RNF13 PLXND1 MEIS1 RHOQ SETBP1	2.26e-04	195	115	6	M3117
Coexpression	GSE12366_GC_VS_MEMORY_BCELL_UP	ODC1 MBOAT2 ZNF608 SYNE2 HSPA2 PLK4	2.45e-04	198	115	6	M3171
Coexpression	HOLLEMAN_ASPARAGINASE_RESISTANCE_B_ALL_UP	NOP53 RPL3 RPL4	2.49e-04	28	115	3	M2553
Coexpression	GSE22886_NAIVE_CD8_TCELL_VS_MONOCYTE_UP	DSC1 RRP1B SPOCK2 SYNE2 ZNF506 PLCG1	2.52e-04	199	115	6	M4494
Coexpression	GSE10239_NAIVE_VS_KLRG1HIGH_EFF_CD8_TCELL_UP	RPL36 MATK RPS27 SSH2 USPL1 AFG1L	2.52e-04	199	115	6	M3052
Coexpression	GSE10239_NAIVE_VS_KLRG1INT_EFF_CD8_TCELL_UP	ERCC5 RPS27 KMT5B SSH2 USPL1 RPL4	2.52e-04	199	115	6	M3050
Coexpression	CROONQUIST_NRAS_SIGNALING_DN	NCAPH PLK4 TOP2A KIF22	2.58e-04	70	115	4	M10739
Coexpression	GSE3039_NKT_CELL_VS_ALPHAALPHA_CD8_TCELL_UP	RRP1B PDPK1 SFMBT2 ZNF608 KMT5B SSH2	2.58e-04	200	115	6	M6473
Coexpression	GSE36392_EOSINOPHIL_VS_MAC_IL25_TREATED_LUNG_UP	SPOCK2 DCX SLC22A2 MYPN PDZD8 GFPT2	2.58e-04	200	115	6	M5280
Coexpression	GSE27786_NKCELL_VS_MONO_MAC_UP	RPS27 ODC1 CSDE1 SSH2 SON AFG1L	2.58e-04	200	115	6	M4860
Coexpression	HALLMARK_G2M_CHECKPOINT	MTF2 ODC1 MEIS1 PLK4 TOP2A KIF22	2.58e-04	200	115	6	M5901
Coexpression	GSE1460_DP_VS_CD4_THYMOCYTE_DN	SP100 PPFIBP2 ZNF365 ZNF512B RPL3 RPL4	2.58e-04	200	115	6	M3454
Coexpression	GSE3203_INFLUENZA_INF_VS_IFNB_TREATED_LN_BCELL_DN	RRP1B MATK CARMIL1 SFMBT2 SYNE2 PLEC	2.58e-04	200	115	6	M6781
Coexpression	GSE7852_LN_VS_THYMUS_TCONV_DN	ZNF212 MAGI3 NCAPH NEDD4 USPL1 TOP2A	2.58e-04	200	115	6	M5746
Coexpression	GOLDRATH_NAIVE_VS_EFF_CD8_TCELL_DN	ODC1 NCAPH RHOQ PLK4 TOP2A KIF22	2.58e-04	200	115	6	M3036
Coexpression	GSE21670_UNTREATED_VS_TGFB_IL6_TREATED_STAT3_KO_CD4_TCELL_UP	ODC1 NCAPH RHOQ MGAT5 TOP2A KIF22	2.58e-04	200	115	6	M7431
Coexpression	GSE34515_CD16_POS_MONOCYTE_VS_DC_UP	SPOCK2 ZNF512B CSDE1 MGAT5 SLC22A2 TP53BP2	2.58e-04	200	115	6	M8765
Coexpression	TRAVAGLINI_LUNG_CD8_MEMORY_EFFECTOR_T_CELL	RPS27 PYHIN1 SYNE2	2.77e-04	29	115	3	M41681
Coexpression	TRAVAGLINI_LUNG_CD4_NAIVE_T_CELL	RPL36 SPOCK2 RPS27 RPL3 RPL4	2.96e-04	132	115	5	M41684
ToppCell	ASK454-Immune-T_cell\|Immune / Donor, Lineage and Cell class of Lung cells from Dropseq	SP100 RPL36 SPOCK2 RPS27 NCAPH SYNE2 NKTR RPL3 RPL4	1.79e-09	193	114	9	11e1db416dc9a0b99ddb72d6021fba6e25405b5c
ToppCell	10x_3'_v3-tissue-resident_(10x_3'_v3)-lymphocytic-T_lymphocytic-CD4-positive,_alpha-beta_T_cell\|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 SPOCK2 RPS27 SYNE2 GFPT2 BRD1 RPL3 FAM177A1	2.05e-09	196	114	9	c647ce58de4c5bb4ceb1123690e637eae4ae1b82
ToppCell	Healthy_donor\|World / disease group, cell group and cell class (v2)	RPL36 NOP53 MATK RPS27 PYHIN1 SYNE2 NKTR RPL3 RPL4	2.24e-09	198	114	9	1ed0b50c9754727a05c27b21f3546bf2e37eef7f
ToppCell	Multiple_Sclerosis-Lymphocyte-T_NK\|Multiple_Sclerosis / Disease, Lineage and Cell Type	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	2.35e-09	199	114	9	87806883330ad56cf1dfd564734c0c1b64152e7c
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	RPL36 NOP53 SPOCK2 ODC1 NSMCE3 SYNE2 RPL3 RPL4 SON	2.35e-09	199	114	9	3003badee037d4d63a8018a74c0aea213d049e43
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DOK6 SPOCK2 PYHIN1 SYNE2 NKTR PLCG1 PRKDC BRD1	1.20e-08	167	114	8	83969c36ac44b96afc9aa09400a99fa2b487f7ff
ToppCell	control-Treg\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	RPL36 NOP53 SPOCK2 RPS27 ZNF365 PYHIN1 RPL3 RPL4	2.35e-08	182	114	8	8e96a9dd70814cb0925776613b3a12026d455cad
ToppCell	droplet-Spleen-nan-18m-Lymphocytic\|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SP100 RPL36 RPS27 PYHIN1 ZNF608 XRN1 RPL3 RPL4	2.45e-08	183	114	8	28cbf909424f3be4491d49832f0aca0386560814
ToppCell	droplet-Spleen-nan-18m-Lymphocytic-nan\|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SP100 RPL36 RPS27 PYHIN1 ZNF608 XRN1 RPL3 RPL4	2.45e-08	183	114	8	3fa608aa6b119869ec3280dc388dfee57160e63a
ToppCell	Healthy_donor-CD4+_Tcm\|World / disease group, cell group and cell class (v2)	RPL36 NOP53 SPOCK2 RPS27 NSMCE3 SYNE2 RPL3 RPL4	3.55e-08	192	114	8	1603903454ba6bf65c8e13ede620e0b1e8fbd7ec
ToppCell	ASK454-Immune-T_cell\|ASK454 / Donor, Lineage and Cell class of Lung cells from Dropseq	SP100 RPL36 RPS27 NCAPH SYNE2 NKTR RPL3 RPL4	3.70e-08	193	114	8	27c38a364bcdb4c0967155f18aa81d37e17c920b
ToppCell	severe-Lymphocytic-CD4_T_cells_3\|severe / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.01e-08	195	114	8	90136f65e3e72cf2b2e0a13b48a7c9d60628b396
ToppCell	mild_COVID-19-CD4+_CTL\|World / disease group, cell group and cell class (v2)	NOP53 MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	4.01e-08	195	114	8	980909246c30471c9f2f97c3b20b6d6d20fe574e
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic-Lymphocytic_T\|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)	RPL36 NOP53 MATK MATR3 SPOCK2 SYNE2 RPL3 SON	4.01e-08	195	114	8	cab90c67a7b3119c0d0d2d5e84511c41dcb8765f
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic\|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)	MATK MATR3 SPOCK2 PYHIN1 SYNE2 NKTR RPL3 SON	4.17e-08	196	114	8	a9157809122e6fc5783a291522f103bef30943e4
ToppCell	normal_Pleural_Fluid-T/NK_cells\|normal_Pleural_Fluid / Location, Cell class and cell subclass	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	4.34e-08	197	114	8	53fc73dcf93403251b5d519aa6fcfbff7240015f
ToppCell	healthy_donor-Lymphocytic-T_cell\|healthy_donor / Disease condition, Lineage, Cell class and subclass	RPL36 NOP53 SPOCK2 RPS27 SYNE2 PLCG1 RPL3 RPL4	4.34e-08	197	114	8	63d0f06e150e7eb800ecb70e97b9d12a01c84e37
ToppCell	PBMC-Convalescent-Lymphocyte-T/NK\|Convalescent / Location, Disease Group, Cell group, Cell class (2021.03.09)	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	4.51e-08	198	114	8	24f6954aff8751885e783d68c631b04dd1980f48
ToppCell	10x_3'_v3-tissue-resident_(10x_3'_v3)-lymphocytic\|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4 FAM177A1	4.51e-08	198	114	8	5024d43b4cf7dea305ed911f1e123ca7fd44e990
ToppCell	PBMC-Convalescent-Lymphocyte-T/NK\|Convalescent / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	4.51e-08	198	114	8	4633e379893a26a746f8e29302cc54bbe04dd23f
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD4+_T-CD4+_CTL-\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	RPL36 MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	4.51e-08	198	114	8	f77f21f21566a04145217ebf85cd14db48945056
ToppCell	T/NK_cells\|World / Lineage and Cell class	NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.51e-08	198	114	8	c11f69b22a1ae0b371e9d0f0999716c945d0929d
ToppCell	COVID-19_Convalescent-Lymphoid_T/NK\|COVID-19_Convalescent / Disease group, lineage and cell class	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	4.51e-08	198	114	8	457ba9e3f1bb6453af8cc1a6e7436af66296f8f5
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD4+_T-CD4+_CTL-\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	RPL36 MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	4.51e-08	198	114	8	7f61a9a3d61992c023cc4bc4571a0a7a1a160833
ToppCell	severe-Lymphocytic-CD8_T_cells\|severe / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.51e-08	198	114	8	2cd13418396ab2c53b1be96e7795841c2482bfca
ToppCell	10x_3'_v3-lymph_node_(10x_3'_v3)-lymphocytic\|lymph_node_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 SPOCK2 RPS27 ODC1 NSMCE3 RPL3 RPL4	4.51e-08	198	114	8	ab17003f5dddc495aa7e1bfb84df66cd2f9113c3
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD4+_T-CD4+_CTL\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	RPL36 MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	4.51e-08	198	114	8	d3d117dc3c2a533365bd2d1a6ab0c60e976d2c10
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD4+_T-CD4+_CTL\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	RPL36 MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	4.51e-08	198	114	8	ed39ac9d4b1f50e9086ace3ad3325db0d5f4c323
ToppCell	10x_3'_v3-thymus_(10x_3'_v3)-lymphocytic\|thymus_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 SPOCK2 RPS27 NSMCE3 SYNE2 RPL3 RPL4	4.69e-08	199	114	8	55a53949fac7534aa83cfc845131e02032eec5f7
ToppCell	mild-Lymphocytic\|mild / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.69e-08	199	114	8	57a429b4c98decbd0bffb67733eaae1f907898a3
ToppCell	Healthy/Control\|World / Disease group and Cell class	RPL36 NOP53 SPOCK2 RPS27 SYNE2 NKTR RPL3 RPL4	4.69e-08	199	114	8	2623c42b3e79e401a485879b52e8bbcbc581544d
ToppCell	10x_3'_v3-blood_(10x_3'_v3)-lymphocytic\|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 RPL3 RPL4	4.69e-08	199	114	8	4366ead68736ae3a2cefac71fd349d526cccb611
ToppCell	PBMC-Severe-Lymphocyte-T/NK\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.87e-08	200	114	8	73b91cb66c375b44e852404a4a445cf2b9595aee
ToppCell	MS-Multiple_Sclerosis-Lymphocyte-T/NK\|Multiple_Sclerosis / Disease, condition lineage and cell class	RPL36 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.87e-08	200	114	8	a0644cfaeeebe6428234daef692f1f3634d0108a
ToppCell	COVID-19_Severe-Lymphoid_T/NK\|COVID-19_Severe / Disease group, lineage and cell class	NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.87e-08	200	114	8	9fc818bf5c9133fc2fece47980e71fd3f8603558
ToppCell	healthy_donor\|World / Disease condition, Lineage, Cell class and subclass	NOP53 MATK SPOCK2 PYHIN1 SYNE2 NKTR RPL3 RPL4	4.87e-08	200	114	8	afd4d5609adaa470e3d880f8be4a4d55e162b3d6
ToppCell	COVID-19-COVID-19_Mild-Lymphocyte-T/NK-CD4+_CTL\|COVID-19_Mild / Disease, condition lineage and cell class	RPL36 MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	4.87e-08	200	114	8	11fd7eca2fa399ec3d7f9556d09e07c886cc9e83
ToppCell	PBMC-Severe-Lymphocyte-T/NK\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	4.87e-08	200	114	8	f1c8780d64b58b6fb84fffbc27f0ad337b1a6e56
ToppCell	10x_3'_v3-tissue-resident_(10x_3'_v3)-lymphocytic-T_lymphocytic-naive_thymus-derived_CD4-positive,_alpha-beta_T_cell\|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 SPOCK2 RPS27 NCAPH ZNF365 RPL4	1.89e-07	160	114	7	6b5b5aa12f0d00757728f5597f569d68406d6f56
ToppCell	Control-Lymphocyte-T_NK-CD8_TCM\|Control / Disease, Lineage and Cell Type	RPL36 NOP53 RPS27 SYNE2 RPL3 HSPA2 RPL4	3.60e-07	176	114	7	1a7948eb86ee1da607db4d0576312b2859d94523
ToppCell	Healthy-CD8+_T_naive\|World / disease group, cell group and cell class	RPL36 DSC1 NOP53 SPOCK2 RPS27 RPL3 RPL4	4.51e-07	182	114	7	b7d9f02c29c92c8803e11f967ad6eea032cb4224
ToppCell	droplet-Spleen-nan-18m\|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SP100 RPL36 RPS27 PYHIN1 ZNF608 XRN1 RPL3	4.51e-07	182	114	7	eeb5dfa4539e9ca5220f26bc2b65717ddcf13b6c
ToppCell	mild_COVID-19-CD4+_CTL\|mild_COVID-19 / disease group, cell group and cell class (v2)	MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	5.41e-07	187	114	7	49196d07e4716c87d33229a4569bdb6b4613b3eb
ToppCell	Control-Lymphocyte-T_NK-CD4_TCM\|Control / Disease, Lineage and Cell Type	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4	5.41e-07	187	114	7	1de80f40f753b31aed1fac9f3ff8a2ee6c755eec
ToppCell	ICU-NoSEP-Lymphocyte-T_NK-CD4_TCM\|ICU-NoSEP / Disease, Lineage and Cell Type	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4	5.41e-07	187	114	7	9856e0ddf989707e2a25ed6ab75bd9fa939c9046
ToppCell	NS-critical-d_16-33-Lymphoid-NKT\|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	RPL36 NOP53 MATK RPS27 PYHIN1 RPL3 RPL4	5.41e-07	187	114	7	dda43cc4983f1c11a2258bbce9f805db4125322c
ToppCell	Int-URO-Lymphocyte-T_NK-CD4_TCM\|Int-URO / Disease, Lineage and Cell Type	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4	5.41e-07	187	114	7	9a137961d33c6b440f1e5ef40360a365e3c03ab2
ToppCell	normal_Lung-T/NK_cells-Naive_CD4+_T\|normal_Lung / Location, Cell class and cell subclass	RPL36 DSC1 NOP53 SPOCK2 RPS27 RPL3 RPL4	5.82e-07	189	114	7	4587d9b610e71698bb749fe1809c6210f93fecfc
ToppCell	Leuk-UTI-Lymphocyte-T_NK-CD4_TCM\|Leuk-UTI / Disease, Lineage and Cell Type	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4	6.03e-07	190	114	7	5f8d606d2f465ddeae7451835f84b3f25a151d2a
ToppCell	PCW_05-06-Mesenchymal-Mesenchymal_fibroblastic-mes_Arw_fibro_(16)\|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung	DOK5 RPL36 NOL12 KANK4 RPL3 RPL4	6.06e-07	118	114	6	e5202fadb3f9d91e56337ddad1666196ec748d87
ToppCell	PBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_CTL-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2	6.24e-07	191	114	7	7ad9b7a77d8a803011306a7f716f62b19b7dc556
ToppCell	PBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_CTL\|Severe / Location, Disease Group, Cell group, Cell class (2021.03.09)	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2	6.24e-07	191	114	7	913cbdd370e0bcc57038dc4c78a4b6d7ac420b5d
ToppCell	COVID-19_Severe-Lymphoid_T/NK-CD4+_CTL\|COVID-19_Severe / Disease group, lineage and cell class	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2	6.24e-07	191	114	7	ca138cc2224b32dd08cf98ead00188bcfb1a9b69
ToppCell	PBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_CTL\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2	6.24e-07	191	114	7	b96233056cab384f34f804f4d767d0f98a280861
ToppCell	PBMC-Severe-Lymphocyte-T/NK-CD4+_T-CD4+_CTL-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	RPL36 NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2	6.24e-07	191	114	7	53131efa8486abeb40e53f1dcf7c2d779f60f8cb
ToppCell	ILEUM-inflamed-(1)_Central_Memory_T_cells\|inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	RPL36 NOP53 SPOCK2 RPS27 RPL3 RPL4 FAM177A1	6.69e-07	193	114	7	c4975fff8927649669e93d3e04308cbf4a48e3e9
ToppCell	ASK428-Immune-T_cell\|Immune / Donor, Lineage and Cell class of Lung cells from Dropseq	RPL36 SPOCK2 RPS27 PYHIN1 SYNE2 NKTR RPL3	6.69e-07	193	114	7	bca9bf941193feea8ed56735041513185c165135
ToppCell	Healthy/Control-CD4+_Tcm\|World / Disease group and Cell class	RPL36 NOP53 SPOCK2 RPS27 NSMCE3 SYNE2 RPL3	6.93e-07	194	114	7	cbdd1786305108cbeddea07a21120067d78c59a0
ToppCell	systemic_lupus_erythematosus-flare-Lymphocytic_T-T4_em-female\|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex	SP100 RPL36 NOP53 SPOCK2 RPS27 SYNE2 NKTR	6.93e-07	194	114	7	0b0042b6a356a49a059fb64a1e1abb25c82d48cf
ToppCell	critical-Lymphoid-NKT\|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	RPL36 NOP53 MATK RPS27 PYHIN1 RPL3 RPL4	6.93e-07	194	114	7	6d47bb99157943fd1283f2e1bfa163ebe08c5a26
ToppCell	systemic_lupus_erythematosus-treated-Lymphocytic_T\|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex	SP100 RPL36 NOP53 SPOCK2 RPS27 PYHIN1 SYNE2	6.93e-07	194	114	7	9588a9b4baebbae08e13d201d4b9dfcf0e6521fb
ToppCell	T/NK_cells-Regulatory_T_cell\|World / Lineage and Cell class	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4	6.93e-07	194	114	7	4f55da763f63d1bf6379582e9d85796a797c5b76
ToppCell	10x_3'_v3-thymus_(10x_3'_v3)\|10x_3'_v3 / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 SPOCK2 RPS27 PLCG1 RPL3 RPL4	6.93e-07	194	114	7	1600ed112cec4ad05469b4aa5647314a8691575c
ToppCell	severe_COVID-19-CD4+_T_naive\|severe_COVID-19 / disease group, cell group and cell class (v2)	NOP53 SPOCK2 RPS27 SYNE2 NKTR PLCG1 RPL3	6.93e-07	194	114	7	4b86f3cc173ea779399d5b3598b45b25f60a4395
ToppCell	10x_3'_v3-blood_(10x_3'_v3)-lymphocytic-T_lymphocytic-naive_thymus-derived_CD4-positive,_alpha-beta_T_cell\|blood_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 DSC1 NOP53 SPOCK2 RPS27 RPL3 RPL4	7.17e-07	195	114	7	4e114f6399863406bd87220dea7fb7dfd08824bd
ToppCell	COVID_non-vent-Lymphocytic-T_cell\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	NOP53 SPOCK2 RPS27 SYNE2 NKTR PLCG1 RPL3	7.17e-07	195	114	7	4bdedd924564a260841a9153604026b57487c83d
ToppCell	systemic_lupus_erythematosus-flare-Lymphocytic_T\|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex	SP100 RPL36 NOP53 SPOCK2 RPS27 PYHIN1 SYNE2	7.17e-07	195	114	7	53528e5788083bce5a8d4611ab3808878e6a9cd3
ToppCell	NS-critical-d_07-13-Lymphoid-NKT\|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	RPL36 NOP53 MATK RPS27 PYHIN1 RPL3 RPL4	7.17e-07	195	114	7	f2693586c9e3c2ad1b5776f319b0b60e0c19628e
ToppCell	normal_Pleural_Fluid\|World / Location, Cell class and cell subclass	SP100 RPL36 NOP53 SPOCK2 RPS27 RPL3 RPL4	7.42e-07	196	114	7	7029c9f4a826f6cfdcb5f7a472fba94e8945a771
ToppCell	Healthy-CD4+_Tcm\|World / disease group, cell group and cell class	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4	7.42e-07	196	114	7	cf19bc920f3ef07a87a2cdcb43f9f5855ef1fa9a
ToppCell	Healthy-CD4+_CTL\|World / disease group, cell group and cell class	NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	7.42e-07	196	114	7	6a623eeb2ba8d4e16543820bcbba41eecbd00ed2
ToppCell	10x5'-Lung-Lymphocytic_T_CD8-Trm/em_CD8\|Lung / Manually curated celltypes from each tissue	SPOCK2 RPS27 ODC1 PYHIN1 SYNE2 PLCG1 GFPT2	7.42e-07	196	114	7	cbb63b9ea85b2060e90dd551aa4e697b3f1494fc
ToppCell	Healthy/Control-CD8+_Tem\|World / Disease group and Cell class	MATK SPOCK2 RPS27 ODC1 PYHIN1 SYNE2 RPL3	7.42e-07	196	114	7	a6dc92476156a695e15373ea57dc04e30014ac55
ToppCell	BLOOD--(1)_T_cell\| / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 RPL4	7.42e-07	196	114	7	9dda5d10f1eecf5322cae467e337e2fb92d8e3a1
ToppCell	Healthy/Control-gd_T\|World / Disease group and Cell class	MATK SPOCK2 RPS27 NSMCE3 PYHIN1 SYNE2 RPL3	7.42e-07	196	114	7	b982c84552e7efbff2be861f0f569f40804f5d88
ToppCell	COVID_non-vent-Lymphocytic\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	SPOCK2 RPS27 PYHIN1 SYNE2 NKTR PLCG1 RPL3	7.68e-07	197	114	7	c672915f8c8c1e948d251f6eaf9f84a5600c1193
ToppCell	BALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic\|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)	NOP53 SPOCK2 NSMCE3 SYNE2 NKTR RPL4 SON	7.68e-07	197	114	7	ef2d1f56acd0be43e69bba7f73f6909ba87f1cb3
ToppCell	healthy_donor-Lymphocytic-T_cell-CD4+_Memory_T_cell\|healthy_donor / Disease condition, Lineage, Cell class and subclass	RPL36 NOP53 SPOCK2 SYNE2 PLCG1 RPL3 RPL4	7.68e-07	197	114	7	c842d169dfce9af3ed7c01dc7e940c0bdd21388c
ToppCell	BAL-Mild-Lymphocyte-T/NK-CD4+_T-CD4+_T_1-\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	RPL36 SPOCK2 RPS27 PYHIN1 SYNE2 PLCG1 RPL3	7.68e-07	197	114	7	b4f801cd48955463285e0c1bb4fc8ea790c631cb
ToppCell	critical-Lymphoid\|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 RPL3 RPL4	7.68e-07	197	114	7	a3b612591f4f1d59aaa305195e224c2bd69c5d53
ToppCell	Healthy_donor-CD4+_CTL\|World / disease group, cell group and cell class (v2)	MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 RPL3	7.68e-07	197	114	7	1dee9b905ef36e567acc1094a3c0e41f56d1261e
ToppCell	control-Lymphocytic-CD8_T_cells\|control / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 SPOCK2 RPS27 PYHIN1 SYNE2 RPL3 RPL4	7.68e-07	197	114	7	c1c47db5e8d1b248bc192556275edd1ce168a953
ToppCell	normal_Lung-T/NK_cells-CD8_low_T\|normal_Lung / Location, Cell class and cell subclass	RPL36 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	7.68e-07	197	114	7	559b22ff973a1551e614a972085343e7d8e8a668
ToppCell	BAL-Mild-Lymphocyte-T/NK-CD4+_T-CD4+_T_1\|Mild / Location, Disease Group, Cell group, Cell class (2021.03.09)	RPL36 SPOCK2 RPS27 PYHIN1 SYNE2 PLCG1 RPL3	7.68e-07	197	114	7	821c1df511cc4a286ddc6fa229059561f6f6bade
ToppCell	BL-critical-LOC-Lymphoid\|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	RPL36 NOP53 SPOCK2 NSMCE3 PYHIN1 RPL3 RPL4	7.95e-07	198	114	7	1c0227e58a64c0bf509bfb9578fb91277316b120
ToppCell	10x_3'_v3-tissue-resident_(10x_3'_v3)-lymphocytic-T_lymphocytic\|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	RPL36 NOP53 SPOCK2 RPS27 SYNE2 RPL3 FAM177A1	7.95e-07	198	114	7	1fa0ea06453d6b979039f63454e7f9c69323a350
ToppCell	mild\|World / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 RPL3 RPL4	7.95e-07	198	114	7	3cef2e13d5ec71bb265171239980697a2560fa30
ToppCell	Sepsis-URO-Lymphocyte-T/NK-gd_T\|URO / Disease, condition lineage and cell class	MATK SPOCK2 RPS27 ZNF365 PYHIN1 SYNE2 SON	7.95e-07	198	114	7	cb584f7754ef4e6d9ec7155022852f2d2676ab4f
ToppCell	Bac-SEP-Lymphocyte-T_NK\|Bac-SEP / Disease, Lineage and Cell Type	RPL36 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	7.95e-07	198	114	7	6dc8d9272218784df2365863f50eb30d07ab8fef
ToppCell	PBMC_fresh-frozen\|World / Compartment, severity and other cell annotations on 10x 3' data (130k)	RPL36 NOP53 RPS27 NKTR RPL3 RPL4 SON	7.95e-07	198	114	7	dcc223a0396b8b673e4ed8c6733ec6cd74e9a03a
ToppCell	severe-Lymphocytic\|severe / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 RPL3 RPL4	7.95e-07	198	114	7	7b85f763a5f5fb7bed8e0d702364a2dd18a74f7d
ToppCell	(2)_NK/T\|World / immune cells in Peripheral Blood (logTPM normalization)	RPL36 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	7.95e-07	198	114	7	3156d26d9a153f594e140cdb04c55b9527747ef0
ToppCell	COVID_vent-Lymphocytic-T_cell-CD4+_Memory_T_cell\|COVID_vent / Disease condition, Lineage, Cell class and subclass	NOP53 SPOCK2 RPS27 SYNE2 PLCG1 RPL3 RPL4	7.95e-07	198	114	7	58f208b76cb0adcecdf632d92f92833a06f9bf71
ToppCell	control-Lymphocytic-CD4_T_cells_3\|control / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 RPL3 RPL4	7.95e-07	198	114	7	667b2a046c9db3be2f2855f658343a56ad9ad32d
ToppCell	healthy_donor-Lymphocytic\|healthy_donor / Disease condition, Lineage, Cell class and subclass	NOP53 MATK SPOCK2 RPS27 PYHIN1 SYNE2 RPL3	8.22e-07	199	114	7	2841e16d54acd344ba454f024e285c28abc37319
ToppCell	control-Lymphocytic\|control / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs	RPL36 NOP53 SPOCK2 RPS27 PYHIN1 RPL3 RPL4	8.22e-07	199	114	7	3437cb814d00758109c4af37f30e0f9088e94147
ToppCell	COVID_vent-Lymphocytic-T_cell-CD4+_Naive_T_cell\|COVID_vent / Disease condition, Lineage, Cell class and subclass	RPL36 NOP53 SPOCK2 RPS27 NKTR RPL3 RPL4	8.22e-07	199	114	7	885bc902b6e2af0b61e452c4154160cd3f1cf98e
ToppCell	(03)_KRT6B+-(2)_GFP_FOXI1\|(03)_KRT6B+ / shred by cell type by condition	SP100 MATR3 RNF13 RHOQ ZNF644 SYNE2 GULP1	8.22e-07	199	114	7	c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell	distal-Hematologic-CD8+_Memory/Effector_T-1\|distal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)	RPL36 MATK SPOCK2 RPS27 PYHIN1 RPL3 RPL4	8.22e-07	199	114	7	a2f54e56013ec2c83407fdb3fcbe5d10d146cca4
ToppCell	mild-CD8+_Tem\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	SP100 MATK SPOCK2 PYHIN1 SYNE2 XRN1 BRD1	8.50e-07	200	114	7	d8aec4904c9420b8f9d7508658ba1e36c66cdfcc
Drug	Rapamycin; Down 200; 0.1uM; MCF7; HT_HG-U133A	DDX31 MTF2 MBOAT2 MEIS1 AUNIP BRD1 PLK4 TP53BP2	6.29e-06	193	115	8	6967_DN
Drug	GSK-3beta Inhibitor VIII; Up 200; 10uM; PC3; HT_HG-U133A	GAD1 SP100 RRP1B MTF2 NELFA PLEC USP33 SON	6.29e-06	193	115	8	7097_UP
Drug	Sulfaguanidine [57-67-0]; Down 200; 18.6uM; PC3; HG-U133A	GAD1 OSTM1 NELFA ZNF512B KAT2B STRN4 PLCG1 SON	7.59e-06	198	115	8	1913_DN
Drug	Cinnarizine [298-57-7]; Down 200; 10.8uM; PC3; HT_HG-U133A	SP100 RRP1B MTF2 TCP11L1 U2AF2 MEIS1 NMT1 JHY	7.87e-06	199	115	8	5817_DN
Disease	Adenoid Cystic Carcinoma	KMT2C PRKDC BRD1 TOP2A SON	4.07e-05	100	112	5	C0010606
Disease	response to peginterferon alfa-2a	IQCH NBAS SPATA17	1.15e-04	25	112	3	EFO_0010103
Disease	restless legs syndrome (implicated_via_orthology)	MEIS1 PKNOX2	3.94e-04	8	112	2	DOID:0050425 (implicated_via_orthology)
Disease	Adenocarcinoma of large intestine	CDK12 MATK NRK PRKDC	4.99e-04	96	112	4	C1319315
Disease	IGF-1 measurement	OSTM1 CARMIL1 SPOCK2 SLC22A2 SYNE2 PLK4 TOP2A AFG1L	5.60e-04	488	112	8	EFO_0004627
Disease	psoriasis	ELOA OSTM1 OSTN SYNE2 MYPN SON	6.26e-04	273	112	6	EFO_0000676
Disease	left ventricular diastolic function measurement	IQCH SYT10 SPATA17	1.15e-03	54	112	3	EFO_0008204
Disease	free cholesterol measurement, very low density lipoprotein cholesterol measurement	DDX56 MGAT5 TYW1B SLC22A2 PLCG1	1.40e-03	215	112	5	EFO_0008317, EFO_0008591
Disease	very low density lipoprotein cholesterol measurement, lipid measurement	DDX56 MGAT5 TYW1B SLC22A2 PLCG1	1.55e-03	220	112	5	EFO_0004529, EFO_0008317
Disease	Global developmental delay	RNF13 ODC1 CSDE1 NBAS	1.68e-03	133	112	4	C0557874
Disease	Bipolar Disorder	DOK5 GAD1 TRPM2 NEDD4 PLCG1 BRD1 AFG1L	2.33e-03	477	112	7	C0005586
Disease	peripheral neuropathy, response to docetaxel trihydrate	TRPM2 CTNNA3	2.34e-03	19	112	2	EFO_0003100, GO_1902519
Disease	leukemia (implicated_via_orthology)	MEIS1 PKNOX2	2.34e-03	19	112	2	DOID:1240 (implicated_via_orthology)
Disease	urate measurement, bone density	CARMIL1 MAGI3 SFMBT2 MEIS1 SPATA17 PRKDC GFPT2 JHY	2.53e-03	619	112	8	EFO_0003923, EFO_0004531
Disease	nucleotide measurement	CARMIL1 STK32C SYNE2	2.73e-03	73	112	3	EFO_0010513
Disease	disease	SLC22A2 SETBP1	2.86e-03	21	112	2	EFO_0000408
Disease	HDL cholesterol change measurement	MBOAT2 SYNE2	3.73e-03	24	112	2	EFO_0007805
Disease	white matter microstructure measurement	OSTN JPH1 SETBP1 SSH2 PLEC NMT1	3.79e-03	390	112	6	EFO_0005674

Protein segments in the cluster

Peptide	Gene	Start	Entry
RHKNNRVKKKNEALP	BRD1	91	O95696
SKPVKKEKEQRTRHL	CDK12	651	Q9NYV4
HKRIHRLKQSLPKRK	AFG1L	171	Q8WV93
SAQRNHAIRIKKLPK	CSDE1	401	O75534
KKVRALKGHVEQKRL	TP53BP2	191	Q13625
KKPLILKRKHATQGT	CCNB3	486	Q8WWL7
EIKKKKHLFGLRIRV	MTF2	336	Q9Y483
LSKKLAAIKRKIHPD	RBM34	226	P42696
VKRKHPRRAQDSKKP	NOL12	176	Q9UGY1
HKTRLKKILKESRQR	IQCH	411	Q86VS3
KRHKKRGIFPKVATN	MEIS1	271	O00470
QTKKKGVKRPARLHT	NOP53	216	Q9NZM5
KVTVKLKPRLRAVHG	KMT2C	4326	Q8NEZ4
KLVRPKRKHGTKSAE	MATK	206	P42679
VRVHLSQKYKRIKKP	MATR3	466	P43243
KTVKPGKVINKDLRH	MAGI3	101	Q5TCQ9
PRRRKSKQHFVEKNK	JHY	246	Q6NUN7
IRPLHRKGSLQKKIV	NEDD4	341	P46934
HKKLRSKRVAPVLIR	NMT1	251	P30419
LLLPVKKTQRRKNTH	MBOAT2	461	Q6ZWT7
KHFQLKRKPKSATLR	NELFA	161	Q9H3P2
VIGKKKKVPRRVIHF	FAM177A1	46	Q8N128
AVKKAQLRSAPRAKK	KAT2B	76	Q92831
NLEKRKRKKVLVHLG	MGAT5	261	Q09328
KPLLSKIKLRNHCKR	KMT5B	446	Q4FZB7
KVPKRQSHLKHVARK	FANCM	1496	Q8IYD8
RKQLIPIRHTKTREK	JPH1	341	Q9HDC5
LRGLVRPHKKRKKLS	DDX56	501	Q9NY93
RREKLHKVAPKIKAL	GAD1	531	Q99259
KHKKDIGPNKRAVRR	HSPA2	251	P54652
PKKSHRQSHRKKVLP	PLXND1	1686	Q9Y4D7
AEIHILKNKGRKRKL	KIF22	546	Q14807
IVNQLKKIIKRKHTL	PDZD8	271	Q8NEN9
PVRHKEFQRNIKKKR	PMS2P5	61	A8MQ11
KNVARLPKSTKKHAI	DOK5	66	Q9P104
HSEQKKRKLILPKRL	OSTM1	306	Q86WC4
LSALTRKKRKAHVKR	DDX31	756	Q9H8H2
RKKIHRRVLKKNPLK	RPL4	306	P36578
AIKTVKHFIEKPRKR	NBAS	1921	A2RRP1
PLHRKKLVLAVKAIN	PPFIBP2	606	Q8ND30
HKGKQRKVVDHPKRR	OSTN	101	P61366
RVKKTKAAAHFLPKL	FGF11	186	Q92914
VRRGSAKKKIHPLQV	CTNNA3	871	Q9UI47
IRGTVKPKRRKKHAV	GASK1B	121	Q6UWH4
KPVKNARISVKGIRH	CPZ	516	Q66K79
ERHIQLVKKRGKVKA	GFPT2	51	O94808
KNITRLPRETKKHAV	DOK6	66	Q6PKX4
QKKHRKLSELERPHK	ELOA	156	Q14241
AAKKAKLRSNPVKVR	FRMPD3	141	Q5JV73
AAKHKLAVKPKKQRV	CRACD	156	Q6ZU35
LAVKPKKQRVSKKHR	CRACD	161	Q6ZU35
ARHIKKSEGQKIPKV	GULP1	56	Q9UBP9
PRKAVRVLLNKKTAH	DCX	191	O43602
NRKIKKLAESHPKIL	DNAH7	3936	Q8WXX0
RITLKKPSNRHEVKR	IDI2-AS1	106	Q9NZ38
RRAKKIPKINILHKQ	PYHIN1	306	Q6K0P9
SHKRTKAPKQARKER	C20orf144	6	Q9BQM9
LSARENKSPKKRHTK	DSC1	111	Q08554
TIKRIPIHRRAKQAK	KANK4	51	Q5T7N3
KLEHFTKLRPKRNKK	CARMIL1	981	Q5VZK9
ARHRKTGQKVALKKV	CDK9	36	P50750
KFIKKRVGTHIRAKR	RPL36	71	Q9Y3U8
RIIKHIAKKNGKSLP	SLC22A2	301	O15244
KAKKIKSQHRPTQRF	PKNOX2	361	Q96KN3
KVARAHPKAKLVLRI	ODC1	141	P11926
KRRKVQTHLIKPGTK	AUNIP	21	Q9H7T9
LTRHLTGIIKKRQKK	NRK	326	Q7Z2Y5
AQREKRKNKIPKHVK	RIOK1	541	Q9BRS2
PENSLKKRVKEIVHK	TCP11L1	96	Q9NUJ3
AKPLTHRRPKVKQKD	SPATA17	196	Q96L03
AILTPKKHTVKKRIG	RHOQ	181	P17081
TPHFNRKRLSKLIKK	RRP1B	316	Q14684
HTTLPQRRRLQKKKA	RRP1B	561	Q14684
PAVKHRKKSLIRLDK	SYNE2	1461	Q8WXH0
HKQTKKRRILIPSDI	NKTR	451	P30414
HTKKLPRKTHRGLRK	RPL3	236	P39023
HKRKLFVNTSKRPPK	TDRD10	96	Q5VZ19
KILEKRHIIKENKVP	PDPK1	111	O15530
LPVRHKEFQRNIKKK	PMS2P2	231	O95744
RPNPHDTKVKKKLRT	ERCC5	906	P28715
NRLRKDQLKKLPVHK	RNF13	216	O43567
AHRLKPIRQKTKKAV	PLK4	596	O00444
AAQPHTVRRTKKLKV	SRBD1	121	Q8N5C6
ESRPLHKKKKRLAKN	STK32C	391	Q86UX6
AVKPKKKHLHRTIEQ	NCAPH	211	Q15003
KHIKLAKRRIPPASK	UBAP2	501	Q5T6F2
VEGQIHKLRLKLRKK	USPL1	881	Q5W0Q7
PKTIKQRHVRKKRKI	RNPC3	271	Q96LT9
HPLRRLKKANDKKRT	SSH2	1401	Q76I76
RVVLKTPAKRHKQLK	TRPM2	1096	O94759
KKDRPRKHLTLNNKV	SP100	551	P23497
APHKTVSQKKRKIAV	SFMBT2	476	Q5VUG0
IPLSIKNLKRKHKRK	UBE2O	516	Q9C0C9
KNNKKVRVTVKPHLL	XRN1	1071	Q8IZH2
SPNQLKRKILIKHKK	PLCG1	451	P19174
LAKRAKAVVQLKPRH	PLEC	921	Q15149
LPDRKKKFQTRVHRK	SYT10	276	Q6XYQ8
QKKIPIKRADILKHV	NSMCE3	101	Q96MG7
KHVSLNKAKKRRLPR	PRKDC	1141	P78527
KIHKRPHRIQKARKS	ZNF644	676	Q9H582
KCSAVKHNRIKGIPK	TOP2A	426	P11388
ERTKHRRKQKTPKKF	ZNF512B	416	Q96KM6
LIRSPRHEKKKKVRK	U2AF2	76	P26368
SHRRIKKLKTEKVDP	ZNF608	291	Q9ULD9
RPRLKPQTKKAKLHQ	ZNF212	356	Q9UDV6
VKKQPKIRHRILRHT	TRAPPC8	1056	Q9Y2L5
QHKKQRVKLPSKALV	STRN4	286	Q9NRL3
KPLFVRHRTQKEIKQ	UQCRFS1P1	181	P0C7P4
RETVKNKSTHLKKPL	ZNF365	36	Q70YC4
LDPTNHKRKKRQSIK	SETBP1	411	Q9Y6X0
KRKHKKKRLVQSPNS	RPS27	16	P42677
VSKEKRKRSPKHRSK	SON	1886	P18583
KKIHIRQKPCIVKNV	ZNF506	416	Q5JVG8
PKDTRHQRKNKSKAI	TYW1B	651	Q6NUM6
SPKRKKQHKKYRSVI	USP33	461	Q8TEY7
CISRKKLEHRIKQPT	SPOCK2	111	Q92563
KRIRPRACKNHKSKL	MYPN	171	Q86TC9