Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionpre-mRNA 3'-splice site binding

U2AF1 ZRSR2P1 ZRSR2 U2AF2

4.53e-097694GO:0030628
GeneOntologyMolecularFunctionRS domain binding

U2AF1 SRSF10 SON SRSF12

9.04e-098694GO:0050733
GeneOntologyMolecularFunctionpre-mRNA binding

U2AF1 ZRSR2P1 SRSF3 TRA2B ZRSR2 U2AF2

8.73e-0864696GO:0036002
GeneOntologyMolecularFunctionmRNA binding

FXR1 SRSF3 SRSF4 TRA2B LUC7L3 CPSF6 LUC7L2 DDX23 SRRM3 CPSF7

1.29e-046946910GO:0003729
GeneOntologyMolecularFunctionRNA polymerase II C-terminal domain binding

SCAF1 SCAF4

6.34e-0411692GO:0099122
GeneOntologyBiologicalProcessmRNA processing

SRRM1 SCAF1 U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CPSF6 CDK13 LUC7L2 RBMX2 DHX38 PHRF1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B SREK1 RBM23 RSRC1 SCAF4 SON CPSF7 SRSF12

1.16e-295516730GO:0006397
GeneOntologyBiologicalProcessRNA splicing

SRRM1 SCAF1 U2AF1 ZRSR2P1 PPIG SRSF10 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CLK2 CDK13 LUC7L2 RBMX2 CLK4 DHX38 CCNL1 DDX23 TRA2A U2AF2 SRSF11 PRPF38B SREK1 RBM23 RSRC1 SON SRSF12

2.39e-295026729GO:0008380
GeneOntologyBiologicalProcessmRNA metabolic process

SRRM1 SCAF1 U2AF1 ZRSR2P1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CPSF6 CDK13 LUC7L2 RBMX2 DHX38 PHRF1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B SREK1 RBM23 RSRC1 SCAF4 SON CPSF7 SRSF12

1.93e-249176731GO:0016071
GeneOntologyBiologicalProcessRNA processing

SRRM1 SCAF1 U2AF1 ZRSR2P1 PPIG SRSF10 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CLK2 CPSF6 CDK13 LUC7L2 RBMX2 CLK4 DHX38 CCNL1 PHRF1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B SREK1 RBM23 RSRC1 SCAF4 SON CPSF7 SRSF12

1.87e-2115006734GO:0006396
GeneOntologyBiologicalProcessmRNA splicing, via spliceosome

SRRM1 U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CDK13 LUC7L2 RBMX2 DHX38 DDX23 TRA2A U2AF2 RBM23 RSRC1 SON SRSF12

1.00e-193586720GO:0000398
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions with bulged adenosine as nucleophile

SRRM1 U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CDK13 LUC7L2 RBMX2 DHX38 DDX23 TRA2A U2AF2 RBM23 RSRC1 SON SRSF12

1.00e-193586720GO:0000377
GeneOntologyBiologicalProcessRNA splicing, via transesterification reactions

SRRM1 U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CDK13 LUC7L2 RBMX2 DHX38 DDX23 TRA2A U2AF2 RBM23 RSRC1 SON SRSF12

1.25e-193626720GO:0000375
GeneOntologyBiologicalProcessregulation of RNA splicing

SRRM1 SRSF10 SRSF3 SRSF4 TRA2B AKAP17A CLK2 CLK4 CCNL1 TRA2A U2AF2 RBM23 SON SRSF12

4.14e-152076714GO:0043484
GeneOntologyBiologicalProcessregulation of mRNA processing

SRRM1 SRSF10 SRSF3 SRSF4 TRA2B TRA2A FIP1L1 U2AF2 RBM23 SON SRSF12

3.33e-121586711GO:0050684
GeneOntologyBiologicalProcessregulation of mRNA splicing, via spliceosome

SRRM1 SRSF10 SRSF3 SRSF4 TRA2B TRA2A U2AF2 RBM23 SON SRSF12

1.18e-111296710GO:0048024
GeneOntologyBiologicalProcessspliceosomal complex assembly

SRSF10 LUC7L3 ZRSR2 LUC7L2 RBMX2 DDX23 U2AF2 SRSF12

1.09e-0999678GO:0000245
GeneOntologyBiologicalProcessregulation of mRNA metabolic process

SRRM1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B TRA2A FIP1L1 U2AF2 RBM23 SON SRSF12

1.71e-084436712GO:1903311
GeneOntologyBiologicalProcessprotein-RNA complex assembly

SRSF10 LUC7L3 ZRSR2 LUC7L2 RBMX2 DDX23 U2AF2 SRSF12

1.22e-06244678GO:0022618
GeneOntologyBiologicalProcessprotein-RNA complex organization

SRSF10 LUC7L3 ZRSR2 LUC7L2 RBMX2 DDX23 U2AF2 SRSF12

1.65e-06254678GO:0071826
GeneOntologyBiologicalProcessnegative regulation of mRNA splicing, via spliceosome

SRSF10 SRSF4 U2AF2 SRSF12

1.96e-0628674GO:0048025
GeneOntologyBiologicalProcessnegative regulation of mRNA processing

SRSF10 SRSF4 U2AF2 SRSF12

2.27e-0629674GO:0050686
GeneOntologyBiologicalProcessnegative regulation of RNA splicing

SRSF10 SRSF4 U2AF2 SRSF12

3.88e-0633674GO:0033119
GeneOntologyBiologicalProcessmRNA splice site recognition

SRSF10 LUC7L3 LUC7L2 SRSF12

2.45e-0552674GO:0006376
GeneOntologyBiologicalProcessnegative regulation of mRNA metabolic process

SRSF10 FXR1 SRSF4 U2AF2 SRSF12

3.62e-05115675GO:1903312
GeneOntologyBiologicalProcessalternative mRNA splicing, via spliceosome

TRA2B CDK13 RSRC1 SRSF12

1.27e-0479674GO:0000380
GeneOntologyBiologicalProcessmRNA alternative polyadenylation

CPSF6 CPSF7

1.55e-046672GO:0110104
GeneOntologyBiologicalProcessribonucleoprotein complex biogenesis

SRSF10 LUC7L3 ZRSR2 LUC7L2 RBMX2 DDX23 U2AF2 SRSF12

2.56e-04515678GO:0022613
GeneOntologyBiologicalProcessco-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway

CPSF6 CPSF7

3.69e-049672GO:0180010
GeneOntologyBiologicalProcessmRNA 3'-end processing

CPSF6 FIP1L1 CPSF7

4.50e-0446673GO:0031124
GeneOntologyBiologicalProcessco-transcriptional RNA 3'-end processing, cleavage and polyadenylation pathway

CPSF6 CPSF7

4.60e-0410672GO:0180012
GeneOntologyBiologicalProcesspositive regulation of RNA splicing

TRA2B TRA2A U2AF2

1.13e-0363673GO:0033120
GeneOntologyBiologicalProcessprotein heterotetramerization

CPSF6 CPSF7

1.21e-0316672GO:0051290
GeneOntologyCellularComponentnuclear speck

SRRM1 U2AF1 PPIG CACNB4 SRSF10 SRSF3 SRSF4 AKAP17A LUC7L3 CLK2 CPSF6 CDK13 BCLAF1 LUC7L2 CCNL1 U2AF2 SRSF11 SREK1 TOPORS RSRC1 SON SRSF12

8.07e-214316822GO:0016607
GeneOntologyCellularComponentspliceosomal complex

SRRM1 U2AF1 ZRSR2P1 TRA2B AKAP17A LUC7L3 ZRSR2 LUC7L2 RBMX2 DHX38 DDX23 TRA2A U2AF2 PRPF38B SREK1

2.56e-162156815GO:0005681
GeneOntologyCellularComponentnuclear body

SRRM1 U2AF1 PPIG CACNB4 SRSF10 SRSF3 SRSF4 AKAP17A LUC7L3 CLK2 CPSF6 CDK13 BCLAF1 LUC7L2 CCNL1 U2AF2 SRSF11 SREK1 TOPORS RSRC1 SON SRSF12

4.51e-149036822GO:0016604
GeneOntologyCellularComponentnuclear protein-containing complex

SRRM1 U2AF1 ZRSR2P1 TRA2B AKAP17A LUC7L3 ZRSR2 CPSF6 CDK13 BCLAF1 LUC7L2 RBMX2 DHX38 CCNL1 MEPCE DDX23 TRA2A FIP1L1 U2AF2 PRPF38B SREK1 CCDC9 CPSF7

2.56e-1113776823GO:0140513
GeneOntologyCellularComponentU2AF complex

U2AF1 ZRSR2P1 ZRSR2 U2AF2

3.56e-097684GO:0089701
GeneOntologyCellularComponentribonucleoprotein complex

SRRM1 U2AF1 ZRSR2P1 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CPSF6 LUC7L2 RBMX2 DHX38 MEPCE DDX23 TRA2A U2AF2 PRPF38B SREK1

3.07e-0811946818GO:1990904
GeneOntologyCellularComponentsmall nuclear ribonucleoprotein complex

LUC7L3 LUC7L2 RBMX2 MEPCE DDX23

2.58e-05107685GO:0030532
GeneOntologyCellularComponentU2-type prespliceosome

LUC7L3 LUC7L2 U2AF2

2.59e-0518683GO:0071004
GeneOntologyCellularComponentprespliceosome

LUC7L3 LUC7L2 U2AF2

2.59e-0518683GO:0071010
GeneOntologyCellularComponentSm-like protein family complex

LUC7L3 LUC7L2 RBMX2 MEPCE DDX23

4.30e-05119685GO:0120114
GeneOntologyCellularComponentmRNA cleavage and polyadenylation specificity factor complex

CPSF6 FIP1L1 CPSF7

8.11e-0526683GO:0005847
GeneOntologyCellularComponentmRNA cleavage factor complex

CPSF6 FIP1L1 CPSF7

1.39e-0431683GO:0005849
GeneOntologyCellularComponentspliceosomal snRNP complex

LUC7L3 LUC7L2 RBMX2 DDX23

2.72e-0496684GO:0097525
GeneOntologyCellularComponentcatalytic step 2 spliceosome

SRRM1 U2AF1 DHX38 DDX23

2.83e-0497684GO:0071013
GeneOntologyCellularComponentU2-type spliceosomal complex

LUC7L3 LUC7L2 RBMX2 U2AF2

2.83e-0497684GO:0005684
GeneOntologyCellularComponentU12-type spliceosomal complex

ZRSR2P1 ZRSR2

4.28e-0330682GO:0005689
DomainRRM

U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B AKAP17A ZRSR2 CPSF6 RBMX2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 CPSF7 SRSF12

8.80e-202306618PS50102
DomainRRM_1

U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B ZRSR2 CPSF6 RBMX2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 CPSF7 SRSF12

5.01e-192086617PF00076
DomainNucleotide-bd_a/b_plait

U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B AKAP17A ZRSR2 CPSF6 RBMX2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 CPSF7 SRSF12

7.01e-192586618IPR012677
DomainRRM

U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B ZRSR2 CPSF6 RBMX2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 CPSF7 SRSF12

1.04e-182176617SM00360
DomainRRM_dom

U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B ZRSR2 CPSF6 RBMX2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 CPSF7 SRSF12

2.24e-182276617IPR000504
Domain-

SRSF10 SRSF3 SRSF4 TRA2B AKAP17A ZRSR2 CPSF6 RBMX2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 CPSF7 SRSF12

2.10e-1624466163.30.70.330
DomainU2AF_small

U2AF1 ZRSR2P1 ZRSR2

4.19e-075663IPR009145
DomainLUC7

LUC7L3 LUC7L2

3.68e-053662PF03194
DomainLuc7-rel

LUC7L3 LUC7L2

3.68e-053662IPR004882
DomainZnF_C3H1

U2AF1 ZRSR2P1 ZRSR2

6.51e-0448663SM00356
Domainzf-CCCH

U2AF1 ZRSR2P1 ZRSR2

6.91e-0449663PF00642
DomainZnf_CCCH

U2AF1 ZRSR2P1 ZRSR2

1.13e-0358663IPR000571
DomainCyclophilin-type_PPIase_CS

PPIG NKTR

2.02e-0319662IPR020892
DomainCyclophilin-type_PPIase

PPIG NKTR

2.47e-0321662IPR024936
DomainPro_isomerase

PPIG NKTR

2.71e-0322662PF00160
Domain-

PPIG NKTR

2.71e-03226622.40.100.10
DomainCyclophilin-type_PPIase_dom

PPIG NKTR

2.71e-0322662IPR002130
DomainCyclophilin-like_dom

PPIG NKTR

2.71e-0322662IPR029000
DomainCSA_PPIASE_1

PPIG NKTR

2.71e-0322662PS00170
DomainCSA_PPIASE_2

PPIG NKTR

2.71e-0322662PS50072
DomainG_patch

GPATCH8 SON

2.97e-0323662SM00443
DomainG_patch_dom

GPATCH8 SON

2.97e-0323662IPR000467
DomainG-patch

GPATCH8 SON

2.97e-0323662PF01585
DomainG_PATCH

GPATCH8 SON

2.97e-0323662PS50174
DomainCYCLIN

RBL2 CCNL1

7.97e-0338662SM00385
Domain-

RBL2 CCNL1

8.80e-03406621.10.472.10
DomainCyclin-like

RBL2 CCNL1

1.01e-0243662IPR013763
PathwayWP_MRNA_PROCESSING

SRRM1 U2AF1 ZRSR2P1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A ZRSR2 CLK2 BCLAF1 RBMX2 CLK4 DHX38 TTC14 U2AF2 SRSF11 SREK1 RSRC2 SON CPSF7 SRSF12

3.56e-214515223MM15946
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA

SRRM1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CPSF6 RBMX2 DHX38 DDX23 FIP1L1 U2AF2 SRSF11 CPSF7 SRSF12

3.78e-182835218M13087
PathwayREACTOME_MRNA_SPLICING

SRRM1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 RBMX2 DHX38 DDX23 U2AF2 SRSF11 SRSF12

7.59e-162125215M14033
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA

SRRM1 U2AF1 ZRSR2P1 SRSF10 SRSF3 TRA2B LUC7L3 ZRSR2 CPSF6 RBMX2 DHX38 DDX23 FIP1L1 U2AF2 SRSF11 CPSF7

1.76e-152775216MM15414
PathwayREACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION

SRRM1 U2AF1 SRSF3 SRSF4 CPSF6 DHX38 FIP1L1 U2AF2 SRSF11 CPSF7

3.95e-14675210M27694
PathwayREACTOME_MRNA_SPLICING

SRRM1 U2AF1 ZRSR2P1 SRSF10 SRSF3 TRA2B LUC7L3 ZRSR2 RBMX2 DHX38 DDX23 U2AF2 SRSF11

2.66e-132015213MM15411
PathwayWP_MRNA_PROCESSING

SRRM1 U2AF1 SRSF10 SRSF3 SRSF4 TRA2B CLK2 CLK4 DHX38 U2AF2 SREK1

8.27e-131265211M39406
PathwayREACTOME_RNA_POLYMERASE_II_TRANSCRIPTION_TERMINATION

SRRM1 U2AF1 SRSF3 CPSF6 DHX38 FIP1L1 U2AF2 SRSF11 CPSF7

1.07e-1262529MM15426
PathwayKEGG_SPLICEOSOME

U2AF1 SRSF10 SRSF3 SRSF4 TRA2B DHX38 DDX23 TRA2A U2AF2 PRPF38B

2.83e-111275210M2044
PathwayREACTOME_METABOLISM_OF_RNA

SRRM1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CPSF6 RBMX2 DHX38 DDX23 FIP1L1 U2AF2 SRSF11 CPSF7 SRSF12

4.13e-117245218M16843
PathwayREACTOME_METABOLISM_OF_RNA

SRRM1 U2AF1 ZRSR2P1 SRSF10 SRSF3 TRA2B LUC7L3 ZRSR2 CPSF6 RBMX2 DHX38 DDX23 FIP1L1 U2AF2 SRSF11 CPSF7

3.17e-106125216MM15547
PathwayREACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM

SRRM1 U2AF1 SRSF3 SRSF4 DHX38 FIP1L1 U2AF2 SRSF11

6.88e-1084528M725
PathwayREACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM

SRRM1 U2AF1 SRSF3 DHX38 FIP1L1 U2AF2 SRSF11

2.63e-0886527MM15413
PathwayREACTOME_PROCESSING_OF_INTRONLESS_PRE_MRNAS

CPSF6 FIP1L1 CPSF7

5.16e-0520523MM15469
PathwayREACTOME_PROCESSING_OF_INTRONLESS_PRE_MRNAS

CPSF6 FIP1L1 CPSF7

5.16e-0520523M497
PathwayREACTOME_RHOBTB1_GTPASE_CYCLE

SRRM1 TRA2B CPSF7

7.96e-0523523M41817
PathwayREACTOME_RHOBTB1_GTPASE_CYCLE

SRRM1 TRA2B CPSF7

1.03e-0425523MM15608
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRONLESS_PRE_MRNA

CPSF6 FIP1L1 CPSF7

1.62e-0429523M783
PathwayREACTOME_PROCESSING_OF_CAPPED_INTRONLESS_PRE_MRNA

CPSF6 FIP1L1 CPSF7

1.62e-0429523MM15444
PathwayREACTOME_RHOBTB_GTPASE_CYCLE

SRRM1 TRA2B CPSF7

2.85e-0435523M41738
PathwayREACTOME_RHOBTB_GTPASE_CYCLE

SRRM1 TRA2B CPSF7

3.37e-0437523MM15683
PathwayREACTOME_MRNA_SPLICING_MINOR_PATHWAY

ZRSR2P1 ZRSR2 DDX23

7.28e-0448523MM15410
PathwayREACTOME_GENE_EXPRESSION_TRANSCRIPTION

SRRM1 U2AF1 SRSF3 PHF20L1 CPSF6 CDK13 DHX38 FIP1L1 U2AF2 SRSF11 CPSF7

1.06e-0310225211MM15436
PathwayWP_7Q1123_DISTAL_COPY_NUMBER_VARIATION

ZP1 SRRM3

2.94e-0322522M48101
PathwayREACTOME_RHOBTB2_GTPASE_CYCLE

SRRM1 TRA2B

3.21e-0323522M41723
PathwayREACTOME_RHOBTB2_GTPASE_CYCLE

SRRM1 TRA2B

3.79e-0325522MM15606
PathwayREACTOME_RNA_POLYMERASE_II_TRANSCRIPTION

SRRM1 U2AF1 SRSF3 SRSF4 CPSF6 CDK13 RBL2 DHX38 FIP1L1 U2AF2 SRSF11 CPSF7

3.91e-0313875212M734
Pubmed

The protein interaction landscape of the human CMGC kinase group.

CEP350 SRRM1 U2AF1 SETD2 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CLK2 CPSF6 CDK13 RBL2 BCLAF1 LUC7L2 CLK4 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SREK1 GPATCH8 RSRC2 RBM23 RSRC1 SON SRSF12

1.47e-32695703023602568
Pubmed

The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts.

SRRM1 U2AF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 CPSF6 CDK13 BCLAF1 LUC7L2 DHX38 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 SREK1 GPATCH8 RSRC2 CCDC9 SCAF4 SON CPSF7 SRSF12

4.01e-29807702922681889
Pubmed

RNA-binding proteins with basic-acidic dipeptide (BAD) domains self-assemble and aggregate in Alzheimer's disease.

SRRM1 U2AF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B LUC7L3 CPSF6 BCLAF1 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B NKTR SREK1 GPATCH8 RSRC2 RSRC1 SCAF4 SON CPSF7 SRSF12

1.28e-27713702729802200
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

ZNF8 SRRM1 U2AF1 SETD2 PPIG SRSF10 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CPSF6 BCLAF1 LUC7L2 RBMX2 PTDSS1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B SREK1 GPATCH8 RSRC2 SCAF4 SON CPSF7

1.63e-251082702938697112
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

SCAF1 ZRSR2P1 PPIG SRSF4 TRA2B AKAP17A LUC7L3 CLK2 CPSF6 BCLAF1 RBMX2 DDX23 TRA2A FIP1L1 PRPF38B SCAF4 CPSF7 SRSF12

2.53e-23251701831076518
Pubmed

The E3 ubiquitin ligase UBR5 interacts with the H/ACA ribonucleoprotein complex and regulates ribosomal RNA biogenesis in embryonic stem cells.

SRRM1 U2AF1 SRSF10 SRSF4 AKAP17A LUC7L3 LUC7L2 CCNL1 PTDSS1 TRA2A U2AF2 PRPF38B SREK1 SON

3.10e-22104701431365120
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

SRRM1 SCAF1 U2AF1 SETD2 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 CDK13 BCLAF1 LUC7L2 RBMX2 C16orf87 DHX38 PHRF1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 NKTR GPATCH8 RSRC1 SCAF4 SON CPSF7

4.45e-221294702830804502
Pubmed

HDLBP Promotes Hepatocellular Carcinoma Proliferation and Sorafenib Resistance by Suppressing Trim71-dependent RAF1 Degradation.

CEP350 SRRM1 SCAF1 U2AF1 PPIG SRSF10 FXR1 AKAP17A LUC7L3 CPSF6 CDK13 BCLAF1 LUC7L2 RBMX2 LAD1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B NKTR RSRC2 RBM23 RSRC1 SCAF4 SON CPSF7

2.08e-211371702836244648
Pubmed

BAP1 regulation of the key adaptor protein NCoR1 is critical for γ-globin gene repression.

SRRM1 SCAF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 CLK2 CPSF6 LUC7L2 RBMX2 DHX38 PTDSS1 MEPCE DDX23 TRA2A U2AF2 SRSF11 PRPF38B NKTR SREK1 RSRC1 SON

1.96e-191318702630463901
Pubmed

A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain.

SRRM1 U2AF1 ZRSR2P1 SRSF10 FXR1 SRSF4 TRA2B AKAP17A ZRSR2 RBMX2 TRA2A U2AF2 SRSF11 SREK1 SCAF4 SON CPSF7

3.17e-19347701716033648
Pubmed

Matrix-screening reveals a vast potential for direct protein-protein interactions among RNA binding proteins.

U2AF1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B ZRSR2 CLK2 CPSF6 CDK13 LUC7L2 DDX23 FIP1L1 U2AF2 SRSF11 PRPF38B SREK1 SRRM3 CCDC9 CPSF7 SRSF12

5.26e-19723702134133714
Pubmed

Characterizing ZC3H18, a Multi-domain Protein at the Interface of RNA Production and Destruction Decisions.

SRRM1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 BCLAF1 LUC7L2 RBMX2 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B RSRC2 RSRC1 SON SRSF12

6.58e-19731702129298432
Pubmed

Insights into the ubiquitin-proteasome system of human embryonic stem cells.

SRRM1 U2AF1 PPIG SRSF3 SRSF4 AKAP17A LUC7L3 CLK2 LUC7L2 CCNL1 PTDSS1 U2AF2 SRSF11 PRPF38B SREK1

7.07e-18269701529511261
Pubmed

Combinatorial targeting of a chromatin complex comprising Dot1L, menin and the tyrosine kinase BAZ1B reveals a new therapeutic vulnerability of endocrine therapy-resistant breast cancer.

SRRM1 U2AF1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B LUC7L3 BCLAF1 LUC7L2 DHX38 PTDSS1 MEPCE TRA2A FIP1L1 U2AF2 SRSF11 SREK1 RSRC1 SON CPSF7

1.29e-17847702135850772
Pubmed

SNIP1 Recruits TET2 to Regulate c-MYC Target Genes and Cellular DNA Damage Response.

SRRM1 SCAF1 PPIG SRSF4 TRA2B CDK13 BCLAF1 LUC7L2 RBMX2 PHRF1 TRA2A FIP1L1 NKTR SON

1.51e-16259701430404004
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

SCAF1 U2AF1 SRSF10 SRSF3 TRA2B LUC7L3 CPSF6 BCLAF1 LUC7L2 DHX38 TTC14 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 SREK1 GPATCH8 SON CPSF7

2.85e-16989702136424410
Pubmed

Large-scale mapping of human protein-protein interactions by mass spectrometry.

SRRM1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B TIAM1 AKAP17A LUC7L3 CLK2 CPSF6 BCLAF1 LUC7L2 DHX38 DDX23 U2AF2 SRSF11 PRPF38B SREK1 GPATCH8 SON

3.99e-151284702217353931
Pubmed

Proteomic, functional, and domain-based analysis of in vivo 14-3-3 binding proteins involved in cytoskeletal regulation and cellular organization.

SRRM1 PPIG SRSF10 SRSF3 TRA2B TIAM1 LUC7L3 CLK2 BCLAF1 LUC7L2 TRA2A PRPF38B SON

4.26e-15255701315324660
Pubmed

Dynamic protein-protein interaction wiring of the human spliceosome.

U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B RBMX2 DHX38 TTC14 TRA2A U2AF2 RBM23

6.21e-15197701222365833
Pubmed

Charting the landscape of tandem BRCT domain-mediated protein interactions.

CEP350 SRRM1 U2AF1 SRSF10 SRSF4 TRA2B LUC7L3 CPSF6 CDK13 BCLAF1 LUC7L2 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SCAF4

1.73e-14670701722990118
Pubmed

Human RNPS1 and its associated factors: a versatile alternative pre-mRNA splicing regulator in vivo.

TRA2B LUC7L3 FIP1L1 SRSF11 NKTR GPATCH8

2.45e-141170614729963
Pubmed

Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.

SRRM1 U2AF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B CPSF6 BCLAF1 LUC7L2 LAD1 MEPCE FIP1L1 U2AF2 SRSF11 PRPF38B RSRC2 TOPORS CCDC9 CPSF7

2.71e-141247702127684187
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

CEP350 SRRM1 SCAF1 U2AF1 SRSF10 FXR1 SRSF3 TRA2B LUC7L3 CPSF6 BCLAF1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 SCAF4 SON CPSF7

1.06e-131024701924711643
Pubmed

ZBTB2 protein is a new partner of the Nucleosome Remodeling and Deacetylase (NuRD) complex.

SCAF1 PPIG SRSF10 FXR1 SRSF4 TRA2B LUC7L3 BCLAF1 RBMX2 TRA2A NKTR SON SRSF12

1.17e-13330701333301849
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

SRRM1 SCAF1 SETD2 PPIG SRSF10 CDK13 BCLAF1 RBMX2 CCNL1 PHRF1 FIP1L1 PRPF38B GPATCH8 TOPORS CCDC9 SCAF4 SON

1.78e-13774701715302935
Pubmed

SMYD3 Impedes Small Cell Lung Cancer Sensitivity to Alkylation Damage through RNF113A Methylation-Phosphorylation Cross-talk.

SRRM1 U2AF1 PPIG FXR1 SRSF3 TRA2B LUC7L3 CDK13 RBL2 BCLAF1 LUC7L2 MEPCE DDX23 U2AF2 SRSF11 SREK1

2.02e-13655701635819319
Pubmed

The interactome of CLUH reveals its association to SPAG5 and its co-translational proximity to mitochondrial proteins.

U2AF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A LUC7L2 TRA2A U2AF2

3.27e-13203701135012549
Pubmed

PTPN14 regulates Roquin2 stability by tyrosine dephosphorylation.

SRRM1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B LUC7L3 CPSF6 CDK13 BCLAF1 LUC7L2 FIP1L1 U2AF2 SRSF11 SREK1 SON

3.42e-13678701630209976
Pubmed

SR protein kinases promote splicing of nonconsensus introns.

SRRM1 SCAF1 PPIG SRSF3 TRA2B CDK13 BCLAF1 TRA2A FIP1L1 SRSF11 PRPF38B SON CPSF7

3.65e-13361701326167880
Pubmed

Proteomic analysis of the cullin 4B interactome using proximity-dependent biotinylation in living cells.

SRRM1 SRSF10 SRSF3 TRA2B CPSF6 TRA2A U2AF2 SRSF11 SREK1 CPSF7

6.38e-13153701028225217
Pubmed

Anticancer sulfonamides target splicing by inducing RBM39 degradation via recruitment to DCAF15.

U2AF1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B CPSF6 BCLAF1 DHX38 DDX23 TRA2A U2AF2 SRSF11 GPATCH8 RBM23 SON

7.48e-13714701628302793
Pubmed

Comprehensive proteomic analysis of the human spliceosome.

SRRM1 U2AF1 SRSF3 SRSF4 DHX38 DDX23 U2AF2 SRSF11 CPSF7

1.16e-1210970912226669
Pubmed

TBK1 phosphorylation activates LIR-dependent degradation of the inflammation repressor TNIP1.

SRRM1 U2AF1 FXR1 TRA2B AKAP17A LUC7L3 CPSF6 CDK13 BCLAF1 LUC7L2 RBMX2 PTDSS1 MEPCE DDX23 FIP1L1 U2AF2 SON

4.54e-12949701736574265
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

SRRM1 U2AF1 SETD2 SRSF10 SRSF3 SRSF4 LUC7L3 CPSF6 BCLAF1 FIP1L1 U2AF2 SRSF11 SREK1 SCAF4 SON CPSF7 SRSF12

4.93e-12954701736373674
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

SCAF1 SETD2 SRSF10 AKAP17A CPSF6 CDK13 RBMX2 CLK4 DHX38 CCNL1 PHRF1 PTDSS1 PRPF38B SREK1 GPATCH8 RSRC2 RBM23 RSRC1 SCAF4 SON

8.69e-121497702031527615
Pubmed

Folate receptor α increases chemotherapy resistance through stabilizing MDM2 in cooperation with PHB2 that is overcome by MORAb-202 in gastric cancer.

U2AF1 SRSF3 LUC7L3 CPSF6 LUC7L2 U2AF2 SRSF11 PRPF38B SREK1 RSRC1

1.24e-11206701034185411
Pubmed

R2TP/Prefoldin-like component RUVBL1/RUVBL2 directly interacts with ZNHIT2 to regulate assembly of U5 small nuclear ribonucleoprotein.

SRRM1 SCAF1 SRSF4 LUC7L2 DHX38 DDX23 U2AF2 SRSF11 PRPF38B SREK1 GPATCH8

2.26e-11300701128561026
Pubmed

WW domains provide a platform for the assembly of multiprotein networks.

SRRM1 CPSF6 BCLAF1 DDX23 FIP1L1 U2AF2 SRSF11 SCAF4 CPSF7

2.67e-1115470916055720
Pubmed

A rational nomenclature for serine/arginine-rich protein splicing factors (SR proteins).

SRSF10 SRSF3 SRSF4 SRSF11 SRSF12

3.63e-111370520516191
Pubmed

Acetylation of ELF5 suppresses breast cancer progression by promoting its degradation and targeting CCND1.

FXR1 SRSF4 TRA2B CPSF6 DHX38 MEPCE DDX23 TRA2A FIP1L1 U2AF2 RBM23 CCDC9 SCAF4 CPSF7

4.33e-11653701433742100
Pubmed

A bead-based approach for large-scale identification of in vitro kinase substrates.

SRRM1 SRSF10 FXR1 CPSF6 BCLAF1 DHX38 FIP1L1 SRSF11 CPSF7

4.45e-1116370922113938
Pubmed

The Activation-Induced Assembly of an RNA/Protein Interactome Centered on the Splicing Factor U2AF2 Regulates Gene Expression in Human CD4 T Cells.

SRRM1 U2AF1 SRSF10 SRSF3 SRSF4 TRA2B CPSF6 TRA2A U2AF2 SON

5.38e-11239701026641092
Pubmed

Complementary proteomics strategies capture an ataxin-1 interactome in Neuro-2a cells.

SRRM1 U2AF1 PPIG SRSF10 FXR1 SRSF3 TRA2B CPSF6 CDK13 BCLAF1 LUC7L2 U2AF2 GPATCH8 RSRC1

5.50e-11665701430457570
Pubmed

The cellular EJC interactome reveals higher-order mRNP structure and an EJC-SR protein nexus.

SRRM1 SRSF10 SRSF3 SRSF4 TRA2B TRA2A CCDC9 SON SRSF12

6.15e-1116970923084401
Pubmed

Interactome analyses revealed that the U1 snRNP machinery overlaps extensively with the RNAP II machinery and contains multiple ALS/SMA-causative proteins.

SRSF3 SRSF4 TRA2B BCLAF1 MEPCE DDX23 TRA2A U2AF2 GPATCH8 RSRC1

6.59e-11244701029884807
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

SRRM1 U2AF1 SRSF3 SRSF4 LUC7L3 CPSF6 LUC7L2 DDX23 FIP1L1 U2AF2 SRSF11 SREK1 CPSF7

1.40e-10582701320467437
Pubmed

Poly(ADP-ribosyl)ation of BRD7 by PARP1 confers resistance to DNA-damaging chemotherapeutic agents.

SRRM1 U2AF1 FXR1 SRSF4 LUC7L3 CPSF6 BCLAF1 LUC7L2 RBMX2 PTDSS1 U2AF2 GPATCH8

2.47e-10486701230940648
Pubmed

A protein related to splicing factor U2AF35 that interacts with U2AF65 and SR proteins in splicing of pre-mRNA.

U2AF1 ZRSR2P1 ZRSR2 U2AF2

5.24e-1077049237760
Pubmed

A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.

SRRM1 TRA2B AKAP17A LUC7L3 CDK13 BCLAF1 DHX38 U2AF2 SRSF11 GPATCH8 RSRC2

7.99e-10420701128065597
Pubmed

Loss of TRIM31 promotes breast cancer progression through regulating K48- and K63-linked ubiquitination of p53.

U2AF1 SETD2 SRSF10 FXR1 SRSF3 TRA2B LUC7L3 CPSF6 TRA2A U2AF2 CPSF7

8.19e-10421701134650049
Pubmed

Disruption of the lamin A and matrin-3 interaction by myopathic LMNA mutations.

SRRM1 SRSF3 SRSF4 TRA2B LUC7L3 DDX23 U2AF2

1.02e-099670725948554
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

SRRM1 SETD2 PPIG TRA2B CDK13 BCLAF1 DHX38 MEPCE DDX23 TRA2A FIP1L1 PRPF38B GPATCH8 SON CPSF7

1.36e-091014701532416067
Pubmed

The Brd4 extraterminal domain confers transcription activation independent of pTEFb by recruiting multiple proteins, including NSD3.

LUC7L2 CLK4 PHRF1 RSRC2 RBM23 RSRC1

1.79e-095770621555454
Pubmed

SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9.

SRSF10 FXR1 SRSF3 SRSF4 TRA2B BCLAF1 RBMX2 U2AF2 CCDC9

2.59e-0925870937794589
Pubmed

Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme Formation.

SRRM1 SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 BCLAF1 TRA2A FIP1L1 SON

2.93e-09361701030344098
Pubmed

Composition and three-dimensional EM structure of double affinity-purified, human prespliceosomal A complexes.

SRRM1 U2AF1 SRSF3 SRSF4 TRA2B DDX23 U2AF2

3.63e-0911570717332742
Pubmed

Delineating the HMGB1 and HMGB2 interactome in prostate and ovary epithelial cells and its relationship with cancer.

SRSF10 SRSF3 TRA2B BCLAF1 CCNL1 TRA2A FIP1L1 NKTR

4.45e-0918870829721183
Pubmed

SRPK2: a differentially expressed SR protein-specific kinase involved in mediating the interaction and localization of pre-mRNA splicing factors in mammalian cells.

SRRM1 U2AF1 SRSF3 U2AF2

4.91e-09117049472028
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

ZNF8 SRRM1 SCAF1 SETD2 FXR1 AKAP17A LUC7L2 PHRF1 MEPCE FIP1L1 U2AF2 SREK1 RSRC2 TOPORS SON

4.96e-091116701531753913
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

SRRM1 U2AF1 CPSF6 CDK13 BCLAF1 MEPCE DDX23 SRSF11 SCAF4 SON CPSF7

5.54e-09506701130890647
Pubmed

A novel SR-related protein is required for the second step of Pre-mRNA splicing.

U2AF1 LUC7L3 RSRC1 SON

7.36e-091270415798186
Pubmed

ZZW-115-dependent inhibition of NUPR1 nuclear translocation sensitizes cancer cells to genotoxic agents.

SRRM1 U2AF1 PPIG SRSF10 FXR1 SRSF4 TRA2B BCLAF1 DDX23 TRA2A U2AF2 SRSF11

7.70e-09660701232780723
Pubmed

Nucleocytoplasmic shuttling of heterodimeric splicing factor U2AF.

U2AF1 ZRSR2P1 U2AF2

7.81e-09370311118443
Pubmed

A systematic screen for CDK4/6 substrates links FOXM1 phosphorylation to senescence suppression in cancer cells.

TRA2B RBL2 TRA2A SRSF11 RBM23 SRSF12

8.17e-097370622094256
Pubmed

Proteomic Analysis of the EWS-Fli-1 Interactome Reveals the Role of the Lysosome in EWS-Fli-1 Turnover.

SRRM1 U2AF1 SRSF3 TRA2B PHRF1 TRA2A U2AF2 SRSF11 GPATCH8 CPSF7

1.38e-08425701024999758
Pubmed

An interaction between U2AF 65 and CF I(m) links the splicing and 3' end processing machineries.

CPSF6 U2AF2 CPSF7

3.12e-08470317024186
Pubmed

Dephosphorylated SRp38 acts as a splicing repressor in response to heat shock.

SRSF10 TRA2B TRA2A

3.12e-08470314765198
Pubmed

Molecular Mechanisms for CFIm-Mediated Regulation of mRNA Alternative Polyadenylation.

CPSF6 FIP1L1 CPSF7

3.12e-08470329276085
Pubmed

Jmjd6 catalyses lysyl-hydroxylation of U2AF65, a protein associated with RNA splicing.

LUC7L3 LUC7L2 U2AF2

3.12e-08470319574390
Pubmed

CHD3 and CHD4 form distinct NuRD complexes with different yet overlapping functionality.

SRRM1 U2AF1 SRSF3 TRA2B LUC7L3 BCLAF1 LUC7L2 DHX38 DDX23 FIP1L1 U2AF2

3.45e-08605701128977666
Pubmed

Human pre-mRNA cleavage factor II(m) contains homologs of yeast proteins and bridges two other cleavage factors.

U2AF1 CPSF6 U2AF2 CPSF7

3.51e-081770411060040
Pubmed

BS69/ZMYND11 reads and connects histone H3.3 lysine 36 trimethylation-decorated chromatin to regulated pre-mRNA processing.

SRRM1 PPIG SRSF10 SRSF4

5.70e-081970425263594
Pubmed

ATAC and Mediator coactivators form a stable complex and regulate a set of non-coding RNA genes.

SRRM1 SRSF3 SRSF4 TRA2B LUC7L3 TRA2A

8.22e-0810770620508642
Pubmed

Regulation of alternative splicing by SRrp86 and its interacting proteins.

SRSF10 SRSF3 SRSF4 TRA2B SREK1

1.10e-075770514559993
Pubmed

Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.

SRRM1 SETD2 CPSF6 BCLAF1 U2AF2 SRSF11 GPATCH8 SON CPSF7

1.10e-0739970935987950
Pubmed

Identification of FUBP1 as a Long Tail Cancer Driver and Widespread Regulator of Tumor Suppressor and Oncogene Alternative Splicing.

SRRM1 FXR1 LUC7L3 DDX23 FIP1L1 SON

1.20e-0711470631553912
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

SCAF1 U2AF1 SRSF10 FXR1 SRSF3 TRA2B LUC7L3 CPSF6 BCLAF1 LUC7L2 DHX38 TRA2A U2AF2 SREK1 CPSF7

1.24e-071425701530948266
Pubmed

Conserved expression of ultra-conserved noncoding RNA in mammalian nervous system.

SRSF3 TRA2B TRA2A SRSF11 PRPF38B

1.43e-076070529055695
Pubmed

Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements.

SRSF10 SRSF4 SRSF11

1.55e-07670317361132
Pubmed

Targeting USP10 induces degradation of oncogenic ANLN in esophageal squamous cell carcinoma.

U2AF1 SRSF10 FXR1 SRSF3 TRA2B CPSF6 BCLAF1 DHX38 LAD1 MEPCE TRA2A U2AF2 TOPORS CPSF7

1.76e-071257701436526897
Pubmed

Prohibitin 1 regulates tumor cell apoptosis via the interaction with X-linked inhibitor of apoptosis protein.

U2AF1 SRSF10 FXR1 SRSF3 LUC7L3 CPSF6 LUC7L2 PTDSS1 U2AF2 SRSF11 SON

2.12e-07725701127025967
Pubmed

Targeted and Interactome Proteomics Revealed the Role of PHD2 in Regulating BRD4 Proline Hydroxylation.

SRRM1 FXR1 SRSF3 TRA2B DDX23 TRA2A FIP1L1 U2AF2 CPSF7

2.56e-0744170931239290
Pubmed

Distinct sequence motifs within the 68-kDa subunit of cleavage factor Im mediate RNA binding, protein-protein interactions, and subcellular localization.

SRSF3 TRA2B CPSF6

2.72e-07770315169763
Pubmed

Functional properties of p54, a novel SR protein active in constitutive and alternative splicing.

U2AF1 U2AF2 SRSF11

2.72e-0777038816452
Pubmed

Sip1, a novel RS domain-containing protein essential for pre-mRNA splicing.

SRSF3 SRSF4 U2AF2

2.72e-0777039447963
Pubmed

Characterizing WW domain interactions of tumor suppressor WWOX reveals its association with multiprotein networks.

SRSF10 SRSF3 LUC7L3 CPSF6 FIP1L1 SCAF4 CPSF7

3.15e-0722070724550385
Pubmed

Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism.

SRRM1 SCAF1 SETD2 FXR1 CDK13 RBL2 DHX38 PTDSS1 TRA2A PRPF38B NKTR SREK1 GPATCH8 CPSF7

3.39e-071327701432694731
Pubmed

Transferrin Receptor Protein 1 Cooperates with mGluR2 To Mediate the Internalization of Rabies Virus and SARS-CoV-2.

SRRM1 U2AF1 FXR1 SRSF3 TRA2B LUC7L3 PTDSS1 SON

3.66e-0733370836779763
Pubmed

Interactome analysis of the human Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (hMTr1) protein.

SRRM1 FXR1 SRSF4 CPSF6 BCLAF1 U2AF2

3.72e-0713870630320910
Pubmed

A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.

CEP350 SCAF1 SETD2 SRSF3 CPSF6 U2AF2 GPATCH8 RSRC2 WNK2 CPSF7

3.83e-07608701016713569
Pubmed

WWP2 ubiquitylates RNA polymerase II for DNA-PK-dependent transcription arrest and repair at DNA breaks.

U2AF1 SRSF10 FXR1 SRSF3 LUC7L3 CPSF6 TRA2A FIP1L1 U2AF2 CPSF7

4.25e-07615701031048545
Pubmed

Spatial mapping of splicing factor complexes involved in exon and intron definition.

U2AF1 SRSF3 U2AF2

4.34e-07870318559666
Pubmed

SAF-B protein couples transcription and pre-mRNA splicing to SAR/MAR elements.

U2AF1 TRA2B CLK2

4.34e-0787039671816
Pubmed

HIV-1 Vpr induces cell cycle arrest and enhances viral gene expression by depleting CCDC137.

CPSF6 BCLAF1 RBMX2 MEPCE FIP1L1 SON

5.62e-0714870632538781
Pubmed

SPATA2-Mediated Binding of CYLD to HOIP Enables CYLD Recruitment to Signaling Complexes.

SRSF10 SRSF3 SRSF4 TRA2B CPSF6 BCLAF1 TRA2A FIP1L1

5.68e-0735370827545878
Pubmed

Characterization of staufen1 ribonucleoproteins by mass spectrometry and biochemical analyses reveal the presence of diverse host proteins associated with human immunodeficiency virus type 1.

SRSF10 SRSF4 LUC7L2 PTDSS1 DDX23 FIP1L1 CPSF7

5.81e-0724170723125841
Pubmed

MKRN2 Physically Interacts with GLE1 to Regulate mRNA Export and Zebrafish Retinal Development.

SCAF1 PPIG CLK2 CPSF6 BCLAF1 CLK4 PHRF1 SON

6.31e-0735870832460013
Pubmed

SARS-CoV-2 N Protein Antagonizes Stress Granule Assembly and IFN Production by Interacting with G3BPs to Facilitate Viral Replication.

FXR1 SRSF4 LUC7L3 CPSF6 BCLAF1 FIP1L1 U2AF2

6.49e-0724570735652658
Pubmed

The SR protein family.

SRSF3 SRSF4 SRSF11

6.50e-07970319857271
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

SRRM1 U2AF1 FXR1 SRSF3 LUC7L3 CPSF6 CDK13 LUC7L2 DHX38 PTDSS1 DDX23 U2AF2 RSRC1 SON

7.30e-071415701428515276
InteractionJMJD6 interactions

SCAF1 U2AF1 ZRSR2P1 SETD2 PPIG TRA2B AKAP17A LUC7L3 ZRSR2 CPSF6 LUC7L2 RBMX2 CLK4 DHX38 CCNL1 PHRF1 U2AF2 SRSF11 PRPF38B SREK1 RSRC2 RBM23 RSRC1 SCAF4 SON CPSF7

2.31e-342057026int:JMJD6
InteractionSRPK2 interactions

SRRM1 SCAF1 U2AF1 SETD2 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CLK2 CPSF6 CDK13 BCLAF1 LUC7L2 RBMX2 PTDSS1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B NKTR SREK1 GPATCH8 RSRC2 RBM23 RSRC1 SCAF4 SON CPSF7 SRSF12

1.03e-337177036int:SRPK2
InteractionRNPS1 interactions

SRRM1 U2AF1 SETD2 PPIG RIN3 SRSF10 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 CLK2 CPSF6 LUC7L2 DHX38 CCNL1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 NKTR SREK1 GPATCH8 TOPORS CCDC9 SCAF4 SON CPSF7

1.77e-304257029int:RNPS1
InteractionSRSF6 interactions

SRRM1 SCAF1 SETD2 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A CLK2 CPSF6 CDK13 BCLAF1 LUC7L2 CLK4 PHRF1 MEPCE DDX23 TRA2A U2AF2 SRSF11 PRPF38B NKTR SREK1 GPATCH8 TOPORS RBM23 SON SRSF12

7.70e-305037030int:SRSF6
InteractionCLK2 interactions

SRRM1 U2AF1 SETD2 SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CLK2 CPSF6 BCLAF1 LUC7L2 MEPCE TRA2A FIP1L1 U2AF2 SRSF11 NKTR GPATCH8 SON CPSF7 SRSF12

1.50e-291957023int:CLK2
InteractionSRSF4 interactions

SRRM1 SCAF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B AKAP17A CLK2 CDK13 CLK4 MEPCE DDX23 TRA2A U2AF2 SRSF11 NKTR SREK1 GPATCH8 TOPORS RBM23 SON CPSF7 SRSF12

1.05e-263007024int:SRSF4
InteractionDDX23 interactions

SRRM1 SCAF1 U2AF1 SETD2 PPIG SRSF10 SRSF4 AKAP17A LUC7L3 CPSF6 CDK13 BCLAF1 RBMX2 DHX38 PHRF1 TTC14 MEPCE DDX23 FIP1L1 U2AF2 SRSF11 NKTR SREK1 GPATCH8 RSRC2 RSRC1

1.37e-244807026int:DDX23
InteractionSRSF1 interactions

SRRM1 SCAF1 U2AF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CLK2 CPSF6 CDK13 LUC7L2 RBMX2 CLK4 MEPCE TRA2A U2AF2 SRSF11 SREK1 RSRC1 SON CPSF7 SRSF12

4.96e-245707027int:SRSF1
InteractionSNRNP70 interactions

SRRM1 SCAF1 U2AF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B TIAM1 LUC7L3 CLK2 CPSF6 BCLAF1 LUC7L2 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B NKTR SREK1 GPATCH8 RSRC2 CCDC9 RSRC1 SCAF4 SON CPSF7 SRSF12

9.79e-249847032int:SNRNP70
InteractionSRRM4 interactions

SRRM1 U2AF1 ZRSR2P1 SRSF4 AKAP17A ZRSR2 LUC7L2 RBMX2 CLK4 C16orf87 SRSF11 SREK1 RSRC1

1.10e-23377013int:SRRM4
InteractionSAP18 interactions

SRRM1 SCAF1 U2AF1 SETD2 PPIG SRSF10 SRSF3 TRA2B CLK2 CPSF6 PHRF1 DDX23 TRA2A U2AF2 SRSF11 PRPF38B NKTR SREK1 GPATCH8 TOPORS CCDC9 SON

1.90e-233057022int:SAP18
InteractionSRSF7 interactions

SRRM1 SCAF1 U2AF1 PPIG RIN3 SRSF10 FXR1 SRSF3 SRSF4 TRA2B LUC7L3 CLK2 CPSF6 BCLAF1 LUC7L2 MEPCE DDX23 TRA2A U2AF2 SRSF11 NKTR SREK1 CCDC9 SON

4.52e-234257024int:SRSF7
InteractionLUC7L interactions

SRRM1 SETD2 PPIG SRSF10 FXR1 LUC7L3 CLK2 BCLAF1 LUC7L2 MEPCE TRA2A U2AF2 SRSF11 PRPF38B NKTR GPATCH8 RBM23 RSRC1 SCAF4 CPSF7

1.67e-222427020int:LUC7L
InteractionDHX8 interactions

SRRM1 SCAF1 SETD2 SRSF4 AKAP17A LUC7L3 CPSF6 CDK13 BCLAF1 LUC7L2 RBMX2 DHX38 PHRF1 TTC14 DDX23 FIP1L1 SRSF11 NKTR GPATCH8 RSRC2 SON

2.38e-222927021int:DHX8
InteractionSRPK1 interactions

SRRM1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CPSF6 BCLAF1 LUC7L2 RBMX2 CLK4 PTDSS1 DDX23 U2AF2 SRSF11 SREK1 RSRC2 RBM23 RSRC1 SON SRSF12

6.91e-224777024int:SRPK1
InteractionSRSF11 interactions

SRRM1 PPIG SRSF10 SRSF3 SRSF4 TRA2B CLK2 BCLAF1 LUC7L2 DDX23 TRA2A U2AF2 SRSF11 PRPF38B SREK1 GPATCH8 SON SRSF12

7.78e-212037018int:SRSF11
InteractionPNN interactions

SRRM1 SCAF1 PPIG SRSF10 SRSF3 SRSF4 AKAP17A CLK2 CPSF6 BCLAF1 LUC7L2 RBMX2 DDX23 TRA2A U2AF2 SRSF11 NKTR SREK1 TOPORS CCDC9

1.43e-203027020int:PNN
InteractionSNIP1 interactions

SRRM1 SCAF1 PPIG SRSF10 SRSF4 TRA2B CLK2 CDK13 BCLAF1 LUC7L2 RBMX2 PHRF1 TTC14 MEPCE TRA2A FIP1L1 NKTR GPATCH8 TOPORS CCDC9 SON SRSF12

1.76e-204177022int:SNIP1
InteractionCLK3 interactions

SRRM1 PPIG SRSF10 SRSF3 SRSF4 TRA2B CLK2 BCLAF1 LUC7L2 MEPCE TRA2A U2AF2 SRSF11 PRPF38B GPATCH8 TOPORS CCDC9 SRSF12

3.37e-202207018int:CLK3
InteractionZC3H18 interactions

SRRM1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 CLK2 CPSF6 BCLAF1 LUC7L2 RBMX2 CLK4 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B NKTR RSRC2 TOPORS RSRC1 SON SRSF12

3.63e-198777027int:ZC3H18
InteractionMECP2 interactions

ZNF8 SRRM1 U2AF1 SETD2 PPIG SRSF10 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 ZRSR2 CPSF6 BCLAF1 LUC7L2 RBMX2 PTDSS1 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B NKTR SREK1 GPATCH8 RSRC2 SCAF4 SON CPSF7

4.09e-1912877031int:MECP2
InteractionSNRNP40 interactions

SRRM1 SCAF1 SETD2 SRSF10 SRSF3 PHF20L1 AKAP17A LUC7L3 CPSF6 BCLAF1 DHX38 PHRF1 TTC14 MEPCE DDX23 U2AF2 NKTR SREK1 GPATCH8 RSRC1 SCAF4 SON CPSF7

9.42e-186377023int:SNRNP40
InteractionRBM39 interactions

SRRM1 U2AF1 SETD2 PPIG RIN3 SRSF10 FXR1 SRSF3 SRSF4 TRA2B CLK2 CPSF6 BCLAF1 LUC7L2 DHX38 TTC14 MEPCE DDX23 TRA2A U2AF2 SRSF11 NKTR SREK1 GPATCH8 RBM23 RSRC1 SON

2.85e-1710427027int:RBM39
InteractionSRPK3 interactions

SRRM1 U2AF1 SRSF3 SRSF4 LUC7L3 CLK2 CDK13 LUC7L2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 SON

1.08e-161907015int:SRPK3
InteractionLUC7L2 interactions

U2AF1 SRSF10 FXR1 TRA2B LUC7L3 ZRSR2 CLK2 CPSF6 BCLAF1 LUC7L2 MEPCE TRA2A U2AF2 SRSF11 SREK1 GPATCH8 CCDC9 SRSF12

1.59e-163537018int:LUC7L2
InteractionU2AF2 interactions

SRRM1 SCAF1 U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B ZRSR2 CLK2 CPSF6 BCLAF1 LUC7L2 DDX23 TRA2A U2AF2 SRSF11 NKTR GPATCH8 SON CPSF7 SRSF12

2.26e-166517022int:U2AF2
InteractionNKAPD1 interactions

SRRM1 SCAF1 PPIG SRSF10 SRSF4 TRA2B CLK2 BCLAF1 CCNL1 DDX23 TRA2A U2AF2 NKTR CCDC9

3.19e-161617014int:NKAPD1
InteractionPRPF40A interactions

SRRM1 U2AF1 PPIG SRSF10 CPSF6 CDK13 RBMX2 CCNL1 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 SREK1 CCDC9 SCAF4 SON CPSF7

5.52e-164467019int:PRPF40A
InteractionCPSF6 interactions

SRRM1 SETD2 PPIG SRSF10 FXR1 TRA2B AKAP17A CLK2 CPSF6 BCLAF1 LUC7L2 MEPCE DDX23 TRA2A FIP1L1 U2AF2 NKTR SCAF4 SON CPSF7

7.27e-165267020int:CPSF6
InteractionCLK1 interactions

SRRM1 PPIG SRSF10 SRSF3 SRSF4 TRA2B LUC7L3 ZRSR2 CLK2 BCLAF1 DDX23 TRA2A U2AF2 SRSF11 SRSF12

9.14e-162197015int:CLK1
InteractionSRSF5 interactions

SRRM1 SCAF1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B TIAM1 AKAP17A ZRSR2 CDK13 RBMX2 CLK4 MEPCE TRA2A U2AF2 SREK1 SON

1.68e-154747019int:SRSF5
InteractionSNRPA interactions

SRRM1 SETD2 PPIG SRSF10 SRSF4 TRA2B LUC7L3 CLK2 BCLAF1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 NKTR RSRC1 SCAF4 SON CPSF7

2.27e-154827019int:SNRPA
InteractionRAD18 interactions

SCAF1 ZRSR2P1 PPIG SRSF4 TRA2B AKAP17A LUC7L3 CLK2 CPSF6 BCLAF1 RBMX2 DDX23 TRA2A FIP1L1 PRPF38B SCAF4 CPSF7 SRSF12

1.41e-144577018int:RAD18
InteractionSRRM2 interactions

SRRM1 U2AF1 SRSF3 SRSF4 TRA2B AKAP17A CLK2 CPSF6 LUC7L2 CLK4 TTC14 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 SRRM3 SON

1.71e-144627018int:SRRM2
InteractionMYCN interactions

SRRM1 SCAF1 SETD2 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B CPSF6 CDK13 BCLAF1 LUC7L2 RBMX2 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B GPATCH8 CCDC9 RSRC1 SON CPSF7 SRSF12

2.58e-1413737027int:MYCN
InteractionSNRPC interactions

SRRM1 SETD2 SRSF10 SRSF4 TRA2B LUC7L3 CPSF6 BCLAF1 DDX23 TRA2A FIP1L1 NKTR SREK1 GPATCH8 SCAF4 SON CPSF7

1.17e-134407017int:SNRPC
InteractionNR2C2 interactions

SRRM1 SCAF1 PPIG SRSF10 FXR1 SRSF3 SRSF4 TRA2B AKAP17A LUC7L3 CLK2 CPSF6 LUC7L2 RBMX2 DHX38 PTDSS1 MEPCE DDX23 TRA2A U2AF2 SRSF11 PRPF38B NKTR SREK1 RSRC1 SON

3.66e-1314037026int:NR2C2
InteractionSRSF10 interactions

SRSF10 SRSF3 SRSF4 TRA2B CLK2 CPSF6 LUC7L2 CLK4 DDX23 TRA2A U2AF2 SRSF11 SREK1 SRSF12

4.46e-132717014int:SRSF10
InteractionSRSF12 interactions

SRSF10 SRSF3 SRSF4 TIAM1 CLK2 LUC7L2 RBMX2 TRA2A U2AF2 SRSF11 SRSF12

8.20e-131307011int:SRSF12
InteractionSRSF8 interactions

SRSF3 SRSF4 TRA2B CLK2 LUC7L2 RBMX2 TRA2A U2AF2 SREK1 CCDC9

1.44e-12987010int:SRSF8
InteractionSNRPB interactions

SRRM1 SETD2 PPIG SRSF4 TRA2B LUC7L3 ZRSR2 CPSF6 BCLAF1 MEPCE DDX23 U2AF2 NKTR RSRC1 SCAF4 SON CPSF7

1.56e-125177017int:SNRPB
InteractionSRSF3 interactions

SRRM1 SCAF1 U2AF1 PPIG SRSF10 SRSF3 SRSF4 TRA2B CLK2 CDK13 MEPCE TRA2A U2AF2 SRSF11 SREK1 CCDC9 SRSF12

1.82e-125227017int:SRSF3
InteractionSNRPF interactions

SRRM1 PPIG TRA2B LUC7L3 ZRSR2 CPSF6 BCLAF1 MEPCE DDX23 TRA2A U2AF2 NKTR RSRC1 SCAF4 CPSF7

3.49e-123857015int:SNRPF
InteractionBARD1 interactions

SRRM1 U2AF1 SRSF10 SRSF4 TRA2B LUC7L3 CPSF6 CDK13 BCLAF1 LUC7L2 MEPCE TRA2A U2AF2 SCAF4

4.80e-123237014int:BARD1
InteractionTRA2A interactions

SRRM1 PPIG SRSF10 SRSF3 SRSF4 TRA2B CLK2 CPSF6 LUC7L2 MEPCE TRA2A U2AF2 SRSF11 SRSF12

6.40e-123307014int:TRA2A
InteractionTOP1 interactions

SRRM1 SCAF1 SETD2 TRA2B TIAM1 CPSF6 RBL2 BCLAF1 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 TOPORS SCAF4 SON CPSF7

1.70e-116967018int:TOP1
InteractionTHRAP3 interactions

PPIG FXR1 SRSF3 SRSF4 CLK2 CPSF6 BCLAF1 LUC7L2 PHRF1 MEPCE DDX23 TRA2A U2AF2 SRSF11 SREK1

2.55e-114437015int:THRAP3
InteractionNKAP interactions

U2AF1 PPIG AKAP17A CPSF6 LUC7L2 RBMX2 TTC14 DDX23 NKTR TOPORS

2.93e-111327010int:NKAP
InteractionZCCHC10 interactions

SRRM1 U2AF1 PPIG AKAP17A CLK2 CPSF6 LUC7L2 SRSF11 NKTR SREK1 TOPORS SON

2.94e-112367012int:ZCCHC10
InteractionNUP43 interactions

SRRM1 SCAF1 SETD2 SRSF10 SRSF3 PHF20L1 TRA2B LUC7L3 BCLAF1 LUC7L2 RBMX2 PHRF1 TTC14 NKTR SREK1 GPATCH8 SON

3.13e-116257017int:NUP43
InteractionCSNK2A1 interactions

SRRM1 RIN3 SRSF10 FXR1 AKAP17A CLK2 CPSF6 RBL2 BCLAF1 LUC7L2 DHX38 CCNL1 PHRF1 MEPCE FIP1L1 SRSF11 NKTR SREK1 RSRC1 CPSF7

4.64e-119567020int:CSNK2A1
InteractionTRA2B interactions

SRRM1 U2AF1 SRSF10 SRSF3 SRSF4 TRA2B CLK2 CPSF6 LUC7L2 MEPCE TRA2A U2AF2 SRSF11 SREK1

4.99e-113857014int:TRA2B
InteractionDHX40 interactions

SCAF1 SETD2 CLK2 CPSF6 BCLAF1 DHX38 TTC14 MEPCE DDX23 FIP1L1 GPATCH8 CPSF7

5.48e-112497012int:DHX40
InteractionRBM25 interactions

SRRM1 U2AF1 SRSF10 SRSF3 CPSF6 MEPCE DDX23 TRA2A FIP1L1 SRSF11 SREK1 RBM23 CPSF7

7.57e-113237013int:RBM25
InteractionYWHAG interactions

CEP350 SRRM1 PPIG SRSF10 FXR1 SRSF3 TRA2B TIAM1 AKAP17A LUC7L3 CLK2 BCLAF1 LUC7L2 MEPCE TRA2A FIP1L1 SRSF11 PRPF38B NKTR RSRC1 SON SRSF12

1.07e-1012487022int:YWHAG
InteractionMAGOH interactions

SRRM1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B CPSF6 TRA2A CCDC9 SON CPSF7 SRSF12

1.08e-102647012int:MAGOH
InteractionOBSL1 interactions

SRRM1 SCAF1 U2AF1 SRSF10 SRSF3 TRA2B LUC7L3 CPSF6 BCLAF1 ECM2 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B SCAF4 SON CPSF7

1.41e-109027019int:OBSL1
InteractionHERC2 interactions

SRRM1 U2AF1 PPIG FXR1 SRSF4 AKAP17A LUC7L3 CLK2 LUC7L2 CCNL1 PTDSS1 U2AF2 SRSF11 PRPF38B SREK1

1.51e-105037015int:HERC2
InteractionNCBP3 interactions

SRSF3 SRSF4 AKAP17A CLK2 CPSF6 LUC7L2 TRA2A SRSF11 CCDC9 RSRC1

1.54e-101567010int:NCBP3
InteractionIK interactions

U2AF1 SRSF10 FXR1 SRSF3 BCLAF1 LUC7L2 TTC14 DDX23 TRA2A U2AF2 SRSF11

1.97e-102157011int:IK
InteractionPRPF38A interactions

U2AF1 PPIG SRSF3 SRSF4 CLK2 LUC7L2 CCNL1 MEPCE FIP1L1 CPSF7

2.10e-101617010int:PRPF38A
InteractionZRSR2 interactions

U2AF1 ZRSR2P1 ZRSR2 CLK2 LUC7L2 CCNL1 U2AF2 NKTR

2.44e-1077708int:ZRSR2
InteractionUBR5 interactions

SRRM1 U2AF1 SRSF10 SRSF4 AKAP17A LUC7L3 LUC7L2 CCNL1 PTDSS1 DDX23 TRA2A U2AF2 PRPF38B SREK1 SON

3.37e-105337015int:UBR5
InteractionCD2BP2 interactions

SRRM1 SRSF4 BCLAF1 DHX38 DDX23 SRSF11 PRPF38B NKTR GPATCH8 RSRC1 CPSF7

4.42e-102327011int:CD2BP2
InteractionACIN1 interactions

SRRM1 U2AF1 SRSF4 CLK2 CPSF6 LUC7L2 PHRF1 DDX23 U2AF2 SRSF11 SCAF4 SON

4.86e-103017012int:ACIN1
InteractionSUZ12 interactions

U2AF1 SRSF10 FXR1 SRSF3 TRA2B LUC7L3 CLK2 CPSF6 BCLAF1 LUC7L2 DDX23 TRA2A FIP1L1 U2AF2 SON CPSF7

4.91e-106447016int:SUZ12
InteractionU2AF1 interactions

U2AF1 SRSF3 TRA2B ZRSR2 CLK2 LUC7L2 DHX38 MEPCE DDX23 U2AF2 SON

6.06e-102397011int:U2AF1
InteractionNKTR interactions

SRSF4 ZRSR2 CLK2 CPSF6 DDX23 U2AF2 NKTR SON

8.67e-1090708int:NKTR
InteractionBRD3 interactions

SRRM1 SCAF1 TRA2B AKAP17A LUC7L2 DHX38 MEPCE TRA2A FIP1L1 U2AF2 SREK1 RSRC2 TOPORS SON

1.30e-094947014int:BRD3
InteractionUFL1 interactions

SRRM1 SRSF10 FXR1 SRSF3 TRA2B AKAP17A LUC7L3 CPSF6 BCLAF1 LUC7L2 PTDSS1 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B CPSF7

1.32e-0910317019int:UFL1
InteractionPRP4K interactions

SRSF3 SRSF4 TRA2B CLK2 CPSF6 BCLAF1 LUC7L2 MEPCE DDX23 FIP1L1 SRSF11 CPSF7

1.34e-093297012int:PRP4K
InteractionDOT1L interactions

SRRM1 U2AF1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B LUC7L3 LUC7L2 PTDSS1 MEPCE TRA2A FIP1L1 SRSF11 RSRC1 SON CPSF7

1.59e-098077017int:DOT1L
InteractionZRANB2 interactions

U2AF1 TRA2B AKAP17A LUC7L3 LUC7L2 DDX23 U2AF2 SRSF11 SREK1 SRRM3

1.67e-091997010int:ZRANB2
InteractionSRRM1 interactions

SRRM1 SRSF3 SRSF4 TRA2B CLK2 CPSF6 BCLAF1 DDX23 TRA2A U2AF2 SRSF11 RBM23

2.52e-093487012int:SRRM1
InteractionCSNK2B interactions

SRRM1 SETD2 RIN3 FXR1 AKAP17A CLK2 BCLAF1 LUC7L2 RBMX2 CCNL1 PHRF1 MEPCE NKTR TOPORS RSRC1

2.97e-096257015int:CSNK2B
InteractionZC3H11A interactions

PPIG SRSF10 SRSF3 AKAP17A CLK2 CPSF6 BCLAF1 TRA2A NKTR CCDC9

3.52e-092157010int:ZC3H11A
InteractionRBBP6 interactions

PPIG SRSF3 SRSF4 CLK2 CPSF6 BCLAF1 CLK4 DDX23 TRA2A SON

3.68e-092167010int:RBBP6
InteractionHDLBP interactions

SRRM1 U2AF1 SRSF10 FXR1 AKAP17A LUC7L3 CPSF6 LUC7L2 RBMX2 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B SCAF4 CPSF7

3.79e-098557017int:HDLBP
InteractionSNW1 interactions

SRRM1 U2AF1 FXR1 SRSF3 TRA2B LUC7L3 CPSF6 RBL2 LUC7L2 DHX38 TTC14 DDX23 FIP1L1 U2AF2 SRSF11 CPSF7

4.14e-097477016int:SNW1
InteractionZBTB2 interactions

SCAF1 PPIG SRSF10 FXR1 SRSF4 TRA2B LUC7L3 BCLAF1 RBMX2 TRA2A NKTR SON SRSF12

4.31e-094507013int:ZBTB2
InteractionDDRGK1 interactions

SRRM1 RIN3 SRSF10 FXR1 SRSF3 TRA2B AKAP17A LUC7L3 CPSF6 BCLAF1 LUC7L2 RBMX2 PTDSS1 DDX23 TRA2A FIP1L1 U2AF2 SRSF11 PRPF38B CPSF7

4.95e-0912497020int:DDRGK1
InteractionSRSF9 interactions

SRSF10 FXR1 SRSF3 TRA2B CPSF6 BCLAF1 TRA2A U2AF2 SRSF11 SREK1

5.22e-092247010int:SRSF9
InteractionRBMX interactions

SRRM1 SRSF10 SRSF3 SRSF4 TRA2B CPSF6 DHX38 MEPCE DDX23 TRA2A U2AF2 SREK1 CPSF7

5.75e-094617013int:RBMX
InteractionFOLR1 interactions

U2AF1 SRSF3 LUC7L3 CPSF6 LUC7L2 U2AF2 SRSF11 PRPF38B SREK1 RSRC1

5.93e-092277010int:FOLR1
InteractionMEN1 interactions

SRRM1 SRSF10 FXR1 SRSF3 SRSF4 PHF20L1 LUC7L3 CPSF6 BCLAF1 DHX38 PTDSS1 MEPCE DDX23 TRA2A FIP1L1 U2AF2 SREK1 SON

8.94e-0910297018int:MEN1
InteractionKIF23 interactions

SRRM1 U2AF1 PPIG SRSF10 FXR1 SRSF3 TRA2B AKAP17A LUC7L3 BCLAF1 DHX38 MEPCE DDX23 TRA2A U2AF2 PRPF38B SON SRSF12

9.22e-0910317018int:KIF23
InteractionCIT interactions

SRRM1 SCAF1 SRSF10 FXR1 SRSF3 TRA2B LUC7L3 BCLAF1 DHX38 MEPCE DDX23 TRA2A FIP1L1 U2AF2 PRPF38B NKTR SREK1 RBM23 SON CPSF7 SRSF12

1.09e-0814507021int:CIT
InteractionSART1 interactions

U2AF1 SRSF4 LUC7L3 ZRSR2 CPSF6 MEPCE DDX23 FIP1L1 U2AF2 SRSF11 CPSF7

1.16e-083177011int:SART1
InteractionRNF113A interactions

SRRM1 U2AF1 PPIG FXR1 SRSF3 TRA2B LUC7L3 CDK13 BCLAF1 LUC7L2 MEPCE DDX23 U2AF2 SRSF11 SREK1

1.17e-086927015int:RNF113A
InteractionPRPF6 interactions

U2AF1 ZRSR2 CLK2 CPSF6 LUC7L2 MEPCE DDX23 TRA2A U2AF2 SON CPSF7

2.12e-083367011int:PRPF6
InteractionSF3B2 interactions

SRRM1 U2AF1 RIN3 FXR1 SRSF3 SRSF4 TRA2B ZRSR2 CPSF6 TTC14 MEPCE U2AF2 SRSF11

2.24e-085177013int:SF3B2
InteractionS100A9 interactions

U2AF1 SRSF10 SRSF3 TRA2B LUC7L3 TRA2A U2AF2 SRSF11 TOPORS SON

2.59e-082657010int:S100A9
InteractionSMC5 interactions

SRRM1 U2AF1 SETD2 SRSF10 SRSF3 SRSF4 LUC7L3 CPSF6 BCLAF1 FIP1L1 U2AF2 SRSF11 SREK1 SCAF4 SON CPSF7 SRSF12

3.83e-0810007017int:SMC5
InteractionBMI1 interactions

SRRM1 U2AF1 FXR1 SRSF3 SRSF4 LUC7L3 BCLAF1 MEPCE DDX23 TRA2A GPATCH8 RSRC1 SON CPSF7

4.96e-086597014int:BMI1
InteractionRC3H2 interactions

SRRM1 SRSF10 FXR1 SRSF3 SRSF4 TRA2B CPSF6 CDK13 BCLAF1 LUC7L2 U2AF2 SRSF11 SREK1 SON

5.76e-086677014int:RC3H2
InteractionPIP4K2A interactions

SETD2 PPIG LUC7L2 MEPCE DDX23 PRPF38B GPATCH8 CCDC9 CPSF7

5.83e-08216709int:PIP4K2A
InteractionSRSF2 interactions

SRRM1 U2AF1 SRSF3 SRSF4 TRA2B ZRSR2 CCNL1 U2AF2 SRSF11 SREK1

6.04e-082907010int:SRSF2
InteractionSFPQ interactions

SRRM1 U2AF1 FXR1 SRSF3 SRSF4 CPSF6 MEPCE DDX23 U2AF2 SREK1 TOPORS SON CPSF7

6.07e-085637013int:SFPQ
InteractionATXN1 interactions

SRRM1 U2AF1 SETD2 PPIG SRSF10 FXR1 SRSF3 TRA2B CPSF6 CDK13 BCLAF1 LUC7L2 U2AF2 GPATCH8 WNK2 RSRC1 CPSF7

6.67e-0810397017int:ATXN1
InteractionMFAP1 interactions

U2AF1 FXR1 TRA2B CPSF6 DHX38 CCNL1 MEPCE DDX23 FIP1L1 CPSF7

7.09e-082957010int:MFAP1
Cytoband9q22.3

ECM2 WNK2

1.50e-04127029q22.3
Cytoband7p15.3

SP4 TRA2A

9.06e-04297027p15.3
CytobandEnsembl 112 genes in cytogenetic band chr1q32

GARIN4 TMCC2 LAD1 FCAMR

1.03e-03290704chr1q32
Cytoband11q12.2

ZP1 CPSF7

1.64e-033970211q12.2
CytobandEnsembl 112 genes in cytogenetic band chr21q22

U2AF1 TIAM1 SCAF4 SON

2.68e-03377704chr21q22
Cytoband21q22.11

TIAM1 SON

4.08e-036270221q22.11
Cytoband1p36.11

SRRM1 SRSF10

4.89e-03687021p36.11
GeneFamilyRNA binding motif containing

U2AF1 ZRSR2P1 SRSF10 SRSF3 SRSF4 TRA2B ZRSR2 CPSF6 RBMX2 TRA2A U2AF2 SRSF11 SREK1 RBM23 SCAF4 CPSF7 SRSF12

1.10e-212134617725
GeneFamilyRNA binding motif containing|Serine and arginine rich splicing factors

SRSF10 SRSF3 SRSF4 SRSF11 SRSF12

6.66e-1112465737
GeneFamilyCDC like kinases

CLK2 CLK4

3.79e-054462480
GeneFamilyCyclophilin peptidylprolyl isomerases

PPIG NKTR

1.05e-0319462909
GeneFamilyG-patch domain containing|Minor histocompatibility antigens

GPATCH8 SON

1.42e-0322462579
GeneFamilyZinc fingers CCCH-type

ZRSR2P1 ZRSR2

3.57e-033546273
GeneFamilyArmadillo repeat containing|Protein phosphatase 1 regulatory subunits

SRSF10 TRA2B PHRF1

1.09e-02181463694
CoexpressionGSE2770_IL12_VS_TGFB_AND_IL12_TREATED_ACT_CD4_TCELL_6H_DN

SRRM1 SETD2 FXR1 TRA2B CDK13 BCLAF1 CLK4 TRA2A U2AF2 RSRC2

1.35e-101997010M6060
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_3DY_DN

U2AF1 SRSF10 AKAP17A BCLAF1 LUC7L2 CLK4 CCNL1 TRA2A NKTR SREK1 RSRC2 SON

1.55e-094327012M41149
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

CEP350 PPIG FXR1 PHF20L1 LUC7L3 BCLAF1 CCNL1 NOX4 SRSF11 PRPF38B NKTR SREK1 RSRC2 SON

1.75e-096567014M18979
CoexpressionHOUNKPE_HOUSEKEEPING_GENES

SRRM1 SCAF1 U2AF1 SRSF10 SRSF3 SRSF4 LUC7L3 ZRSR2 RBMX2 DHX38 PHRF1 MEPCE DDX23 U2AF2 SRSF11 RSRC2 SON

4.88e-0911297017M42508
CoexpressionHOUNKPE_HOUSEKEEPING_GENES

SRRM1 SCAF1 U2AF1 SRSF10 SRSF3 SRSF4 LUC7L3 ZRSR2 RBMX2 DHX38 PHRF1 MEPCE DDX23 U2AF2 SRSF11 RSRC2 SON

7.11e-0911587017MM1338
CoexpressionGSE25146_UNSTIM_VS_HELIOBACTER_PYLORI_LPS_STIM_AGS_CELL_DN

SRSF10 ZRSR2 BCLAF1 CLK4 CCNL1 TTC14 PRPF38B NKTR

1.48e-08166708M8129
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_3DY_NEGATIVE

SETD2 PPIG SRSF3 PHF20L1 BCLAF1 LUC7L2 CLK4 SRSF11 NKTR RSRC2

4.35e-083637010M41103
CoexpressionGSE21927_SPLENIC_VS_TUMOR_MONOCYTES_FROM_C26GM_TUMOROUS_MICE_BALBC_DN

CEP350 SETD2 RBL2 CLK4 SRSF11 NKTR SON

1.01e-06198707M7605
CoexpressionFAN_OVARY_CL15_SMALL_ANTRAL_FOLLICLE_GRANULOSA_CELL

U2AF1 SRSF10 FXR1 SRSF3 TRA2B LUC7L3 CPSF6 CCNL1 TRA2A PRPF38B RSRC2

1.05e-066447011M41717
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

CEP350 SETD2 PPIG SRSF10 PHF20L1 TRA2B CDK13 RBL2 BCLAF1 CCNL1 PTDSS1 TTC14 PRPF38B GPATCH8 RSRC2 SON

1.49e-0614927016M40023
CoexpressionERWIN_COHEN_BLOOD_LIVE_VACCINE_TC_83_AGE_23_48YO_VACCINATED_VS_CONTROL_14DY_UP

PPIG SRSF10 SRSF3 TRA2B LUC7L3 CPSF6 BCLAF1 CLK4 TTC14 SRSF11 SREK1

1.97e-066877011M41022
CoexpressionCHEN_HOXA5_TARGETS_9HR_UP

PPIG SRSF10 CLK4 CCNL1 PRPF38B SREK1 RSRC2

2.23e-06223707M17621
CoexpressionGSE3920_IFNA_VS_IFNG_TREATED_ENDOTHELIAL_CELL_UP

LUC7L3 CLK4 CCNL1 TRA2A CCDC9 SON

6.34e-06170706M6697
CoexpressionTABULA_MURIS_SENIS_SPLEEN_PROERYTHROBLAST_AGEING

SRRM1 U2AF1 PPIG SRSF3 TRA2B LUC7L3 LUC7L2 CCNL1 U2AF2 SRSF11 PRPF38B RSRC2 SON

9.12e-0611447013MM3843
CoexpressionSENGUPTA_NASOPHARYNGEAL_CARCINOMA_WITH_LMP1_UP

PPIG LUC7L3 BCLAF1 CLK4 TTC14 NKTR SREK1 SON

1.22e-05404708M19488
CoexpressionMILI_PSEUDOPODIA_HAPTOTAXIS_UP

ZRSR2P1 FXR1 SRSF3 TRA2B ZRSR2 CPSF6 BCLAF1 SRSF11 TOPORS

1.22e-05534709MM1054
CoexpressionGSE21927_SPLEEN_C57BL6_VS_EL4_TUMOR_BALBC_MONOCYTES_UP

CEP350 SETD2 RBL2 CLK4 RSRC2 SON

1.55e-05199706M7596
CoexpressionGSE21927_C26GM_VS_4T1_TUMOR_MONOCYTE_BALBC_DN

RBL2 CLK4 CCNL1 SRSF11 NKTR SON

1.55e-05199706M7607
CoexpressionPUJANA_ATM_PCC_NETWORK

ZNF8 SRRM1 U2AF1 PPIG SRSF10 SRSF3 TRA2B TIAM1 AKAP17A CLK2 CDK13 TRA2A SRSF11 NKTR

1.59e-0513947014M9585
CoexpressionGSE41867_NAIVE_VS_DAY15_LCMV_EFFECTOR_CD8_TCELL_DN

CLK4 DDX23 SRSF11 NKTR CCDC9 RSRC1

1.60e-05200706M9472
CoexpressionGSE20366_EX_VIVO_VS_HOMEOSTATIC_CONVERSION_TREG_UP

CEP350 ZRSR2 CLK4 MEPCE SRSF11 RSRC2

1.60e-05200706M4313
CoexpressionGRAHAM_CML_QUIESCENT_VS_NORMAL_DIVIDING_UP

FXR1 TRA2B CLK4 RSRC2

1.90e-0559704M17730
CoexpressionFAN_OVARY_CL5_HEALTHY_SELECTABLE_FOLLICLE_THECAL_CELL

U2AF1 TRA2B AKAP17A CLK4 CCNL1 SRSF11 RSRC2

2.26e-05318707M41707
CoexpressionBENPORATH_SOX2_TARGETS

SCAF1 SRSF4 BCLAF1 DHX38 TRA2A FIP1L1 NKTR RSRC2 RBM23 SCAF4

2.43e-057347010M3835
CoexpressionTOYOTA_TARGETS_OF_MIR34B_AND_MIR34C

SETD2 SRSF10 SRSF4 CPSF6 TRA2A FIP1L1 CCDC9 SCAF4

2.81e-05454708M19927
CoexpressionPICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_DN

SETD2 TRA2B CCNL1 RSRC2 SON

3.34e-05137705M4781
CoexpressionTABULA_MURIS_SENIS_MARROW_MATURE_ALPHA_BETA_T_CELL_AGEING

SCAF1 U2AF1 ZRSR2P1 PPIG ZRSR2 DHX38 DDX23 TRA2A PRPF38B

3.56e-05612709MM3804
CoexpressionNAKAYA_PBMC_FLUARIX_FLUVIRIN_AGE_18_50YO_CORRELATED_WITH_HAI_28DY_RESPONSE_AT_7DY_NEGATIVE

SRSF3 PHF20L1 TRA2B BCLAF1 CCNL1 NKTR TOPORS SCAF4

3.81e-05474708M40991
CoexpressionBENPORATH_NANOG_TARGETS

SCAF1 FXR1 SRSF4 TIAM1 BCLAF1 DHX38 DDX23 NKTR RSRC2 SCAF4 SON

5.83e-059887011M6616
CoexpressionBUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP

SETD2 FXR1 AKAP17A CLK4 CCNL1 SRSF11 SREK1 GPATCH8 RSRC2 TOPORS

6.30e-058227010M6782
CoexpressionMARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN

SP4 PPIG PHF20L1 BCLAF1 PRPF38B SREK1 RSRC2 SON

7.20e-05519708M3395
CoexpressionMILI_PSEUDOPODIA_HAPTOTAXIS_UP

FXR1 SRSF3 TRA2B ZRSR2 CPSF6 BCLAF1 SRSF11 TOPORS

7.60e-05523708M12707
CoexpressionGSE7509_UNSTIM_VS_FCGRIIB_STIM_MONOCYTE_DN

TIAM1 CLK2 LUC7L2 PRPF38B SON

8.33e-05166705M6826
CoexpressionMARTORIATI_MDM4_TARGETS_FETAL_LIVER_DN

SP4 PPIG PHF20L1 BCLAF1 PRPF38B SREK1 RSRC2 SON

9.85e-05543708MM997
CoexpressionFLECHNER_BIOPSY_KIDNEY_TRANSPLANT_OK_VS_DONOR_UP

SRRM1 LUC7L3 CDK13 RBL2 TRA2A SRSF11 RSRC2 TOPORS

1.34e-04568708M4023
CoexpressionBUSSLINGER_DUODENAL_IMMUNE_CELLS

PPIG RIN3 SRSF3 TRA2B RBL2 BCLAF1 CCNL1 PRPF38B NKTR SON

1.47e-049117010M40038
CoexpressionSHEN_SMARCA2_TARGETS_UP

CEP350 SRSF10 LUC7L3 BCLAF1 PRPF38B RSRC2 SON

1.48e-04429707M29
CoexpressionPGF_UP.V1_UP

CEP350 PPIG BCLAF1 SREK1 TOPORS

1.57e-04190705M2674
CoexpressionGSE29617_CTRL_VS_DAY3_TIV_FLU_VACCINE_PBMC_2008_UP

AKAP17A BCLAF1 CLK4 CCNL1 SREK1

1.81e-04196705M4928
CoexpressionGSE12845_IGD_NEG_BLOOD_VS_NAIVE_TONSIL_BCELL_DN

CCNL1 SRSF11 NKTR RBM23 RSRC1

1.86e-04197705M3193
CoexpressionGSE21360_PRIMARY_VS_QUATERNARY_MEMORY_CD8_TCELL_DN

CEP350 SETD2 RIN3 AKAP17A SON

1.90e-04198705M7610
CoexpressionGSE1432_CTRL_VS_IFNG_1H_MICROGLIA_DN

CACNB4 PLCH2 CCNL1 DDX23 CCDC9

1.90e-04198705M3401
CoexpressionGSE36826_WT_VS_IL1R_KO_SKIN_DN

SRSF10 AKAP17A LAD1 TRA2A SCAF4

1.90e-04198705M9530
CoexpressionGSE11864_UNTREATED_VS_CSF1_PAM3CYS_IN_MAC_UP

SETD2 SRSF3 ZRSR2 CDK13 BCLAF1

1.90e-04198705M3129
CoexpressionGSE41867_NAIVE_VS_DAY15_LCMV_ARMSTRONG_EFFECTOR_CD8_TCELL_DN

SETD2 SRSF3 PHF20L1 PHRF1 RSRC2

1.95e-04199705M9501
CoexpressionGSE22886_NAIVE_CD4_TCELL_VS_12H_ACT_TH1_UP

CEP350 PLCH2 CLK4 CCNL1 NKTR

1.95e-04199705M4521
CoexpressionGSE5589_WT_VS_IL6_KO_LPS_STIM_MACROPHAGE_45MIN_UP

SRSF10 LUC7L2 PRICKLE2 SON CPSF7

1.95e-04199705M6638
CoexpressionGSE17721_CTRL_VS_POLYIC_6H_BMDC_DN

CEP350 PPIG TRA2B CCNL1 PRPF38B

1.95e-04199705M3716
CoexpressionGSE27786_BCELL_VS_MONO_MAC_UP

SETD2 FXR1 BCLAF1 GPATCH8 SCAF4

1.99e-04200705M4817
CoexpressionTABULA_MURIS_SENIS_BRAIN_NON_MYELOID_NEURON_AGEING

SRRM1 U2AF1 CLK2 LUC7L2 TTC14 NKTR GRIK5 GPATCH8 SRRM3 CCDC9

2.13e-049547010MM3689
CoexpressionTABULA_MURIS_SENIS_MARROW_ERYTHROBLAST_AGEING

SRRM1 PPIG LUC7L3 SRSF11 SON

2.13e-04203705MM3795
CoexpressionKIM_WT1_TARGETS_DN

CEP350 PPIG SRSF10 FXR1 MEPCE SRSF11 NKTR

2.61e-04471707M17859
CoexpressionJOHNSTONE_PARVB_TARGETS_2_DN

SRRM1 SRSF10 FXR1 SRSF3 SRSF4 CDK13

3.17e-04344706M2239
CoexpressionBENPORATH_CYCLING_GENES

SRSF10 FXR1 SRSF3 BCLAF1 MEPCE TRA2A NKTR RSRC2

3.27e-04648708M8156
CoexpressionJOHNSTONE_PARVB_TARGETS_3_DN

CEP350 SETD2 SRSF3 TRA2B CPSF6 LUC7L2 TRA2A NKTR RSRC1

5.27e-04877709M2241
CoexpressionYOSHIMURA_MAPK8_TARGETS_DN

SRSF3 TRA2B BCLAF1 CCNL1 PRICKLE2 NKTR

5.28e-04379706M1885
CoexpressionFAN_OVARY_CL7_ANGEIOGENIC_ENDOTHELIAL_CELL

SRSF3 TRA2B BCLAF1 CCNL1 NKTR

5.64e-04251705M41709
CoexpressionGSE40274_FOXP3_VS_FOXP3_AND_HELIOS_TRANSDUCED_ACTIVATED_CD4_TCELL_DN

CEP350 SRRM1 CPSF6 RSRC2

5.89e-04143704M9149
CoexpressionTABULA_MURIS_SENIS_GONADAL_ADIPOSE_TISSUE_ENDOTHELIAL_CELL_AGEING

CEP350 PPIG RIN3 SRSF10 LUC7L3 MEPCE TRA2A SRSF11 SREK1 RSRC2

6.01e-0410887010MM3699
CoexpressionGSE6092_CTRL_VS_BORRELIA_BIRGDOFERI_INF_ENDOTHELIAL_CELL_DN

TRA2B CLK4 CCNL1 CCDC9

6.87e-04149704M6708
CoexpressionGSE7509_FCGRIIB_VS_TNFA_IL1B_IL6_PGE_STIM_DC_DN

TIAM1 LUC7L3 CLK2 LUC7L2

7.77e-04154704M6824
CoexpressionMARTINEZ_RESPONSE_TO_TRABECTEDIN_DN

SRSF3 SRSF4 RSRC2 SON CPSF7

8.10e-04272705M15123
CoexpressionRICKMAN_TUMOR_DIFFERENTIATED_MODERATELY_VS_POORLY_DN

SRSF3 LUC7L3

8.24e-0416702M17006
CoexpressionLAKE_ADULT_KIDNEY_C5_PROXIMAL_TUBULE_EPITHELIAL_CELLS_STRESS_INFLAM

TRA2B LUC7L3 PRICKLE2 SRSF11 PRPF38B SREK1

8.69e-04417706M39224
CoexpressionAtlasDevelopingGonad_e14.5_ epididymis_emap-29141_top-relative-expression-ranked_1000

SRRM1 SP4 SRSF3 TRA2B LUC7L3 BCLAF1 LUC7L2 TTC14 FIP1L1 NOX4 SRSF11 PRPF38B NKTR RSRC2 TOPORS

3.32e-088016915gudmap_developingGonad_e14.5_ epididymis_1000
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_1000

SRRM1 SP4 SRSF3 PHF20L1 TRA2B LUC7L3 BCLAF1 LUC7L2 TTC14 FIP1L1 SRSF11 PRPF38B NKTR RSRC2 TOPORS

3.60e-088066915gudmap_developingGonad_e12.5_epididymis_1000
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

CEP350 SRRM1 SP4 PPIG TRA2B LUC7L3 CLK2 CPSF6 BCLAF1 RBMX2 TTC14 FIP1L1 SRSF11 PRPF38B SREK1 RSRC2 TOPORS RSRC1

6.78e-0812576918facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasDevelopingGonad_P2_epididymis_emap-30199_k-means-cluster#3_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 TTC14 NOX4 SRSF11 PRPF38B NKTR

1.11e-07249699gudmap_developingGonad_P2_epididymis_1000_k3
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_k-means-cluster#3_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 TTC14 FIP1L1 SRSF11 PRPF38B NKTR

1.56e-07259699gudmap_developingGonad_e12.5_epididymis_k3_1000
CoexpressionAtlasDevelopingGonad_e14.5_ epididymis_emap-29141_k-means-cluster#3_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 TTC14 FIP1L1 SRSF11 PRPF38B NKTR

2.58e-07275699gudmap_developingGonad_e14.5_ epididymis_1000_k3
CoexpressionAtlasDevelopingGonad_e18.5_epididymis_emap-13166_k-means-cluster#3_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 TTC14 FIP1L1 NOX4 SRSF11 NKTR

3.10e-07281699gudmap_developingGonad_e18.5_epididymis_1000_k3
CoexpressionAtlasDevelopingGonad_e16.5_epididymis_emap-29702_k-means-cluster#2_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 TTC14 FIP1L1 NOX4 SRSF11 NKTR

3.39e-07284699gudmap_developingGonad_e16.5_epididymis_1000_k2
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

CEP350 SRRM1 SP4 PPIG TRA2B LUC7L3 CLK2 CPSF6 BCLAF1 RBMX2 TTC14 FIP1L1 SRSF11 PRPF38B SREK1 RSRC2 TOPORS RSRC1

6.22e-0714596918facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlasFacebaseRNAseq_e8.5_Hind Brain Neural Epithelium_top-relative-expression-ranked_2500_k-means-cluster#3

FXR1 PHF20L1 ZRSR2 BCLAF1 C16orf87 DHX38 CCNL1 TTC14 TRA2A RSRC2 TOPORS

1.08e-065326911Facebase_RNAseq_e8.5_Hind Brain Neural Epithelium_2500_K3
CoexpressionAtlasDevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 BCLAF1 LUC7L2 TTC14 FIP1L1 NOX4 SRSF11 NKTR RSRC2 TOPORS

1.34e-067906913gudmap_developingGonad_e16.5_epididymis_1000
CoexpressionAtlasDevelopingGonad_e18.5_epididymis_emap-13166_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 BCLAF1 LUC7L2 TTC14 FIP1L1 NOX4 SRSF11 NKTR RSRC2 TOPORS

1.51e-067996913gudmap_developingGonad_e18.5_epididymis_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_top-relative-expression-ranked_2500_k-means-cluster#4

SRRM1 SP4 PPIG SRSF10 SRSF4 TRA2B LUC7L3 CLK4 PRPF38B GPATCH8 SON

3.19e-065956911Facebase_RNAseq_e10.5_Neural Epithelium Overlying Medial Eminence_2500_K4
CoexpressionAtlasDevelopingGonad_P2_epididymis_emap-30199_top-relative-expression-ranked_1000

SRRM1 SP4 SRSF3 TRA2B LUC7L3 BCLAF1 LUC7L2 TTC14 NOX4 SRSF11 PRPF38B NKTR

8.87e-067976912gudmap_developingGonad_P2_epididymis_1000
CoexpressionAtlasDevelopingGonad_e16.5_epididymis_emap-29702_k-means-cluster#2_top-relative-expression-ranked_500

SRRM1 SRSF3 TRA2B FIP1L1 SRSF11 NKTR

1.45e-05162696gudmap_developingGonad_e16.5_epididymis_500_k2
CoexpressionAtlasDevelopingGonad_e12.5_ovary_emap-28876_k-means-cluster#3_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 TTC14 FIP1L1 SRSF11

3.22e-05277697gudmap_developingGonad_e12.5_ovary_k3_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Maxillary Arch_top-relative-expression-ranked_2500_k-means-cluster#5

SRRM1 PPIG SRSF10 TRA2B LUC7L3 PLCH2 CLK4 SRSF11 PRPF38B SON

3.41e-056296910Facebase_RNAseq_e10.5_Maxillary Arch_2500_K5
CoexpressionAtlasDevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_500

SRRM1 SRSF3 TRA2B BCLAF1 LUC7L2 FIP1L1 SRSF11 NKTR

5.03e-05406698gudmap_developingGonad_e16.5_epididymis_500
CoexpressionAtlasDevelopingGonad_e14.5_ epididymis_emap-29141_top-relative-expression-ranked_500

SRRM1 SRSF3 TRA2B BCLAF1 LUC7L2 NOX4 SRSF11 NKTR

5.68e-05413698gudmap_developingGonad_e14.5_ epididymis_500
CoexpressionAtlasFacebaseRNAseq_e8.5_Floor Plate_top-relative-expression-ranked_2500_k-means-cluster#1

FXR1 PHF20L1 ZRSR2 BCLAF1 DHX38 PRPF38B RSRC2 TOPORS

1.37e-04469698Facebase_RNAseq_e8.5_Floor Plate_2500_K1
CoexpressionAtlasDevelopingGonad_e12.5_ovary_emap-28876_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B LUC7L3 BCLAF1 LUC7L2 TTC14 FIP1L1 SRSF11 TOPORS

2.58e-048046910gudmap_developingGonad_e12.5_ovary_1000
CoexpressionAtlasDevelopingGonad_e12.5_epididymis_emap-29139_top-relative-expression-ranked_500

SRRM1 SP4 TRA2B BCLAF1 LUC7L2 SRSF11 RSRC2

3.30e-04403697gudmap_developingGonad_e12.5_epididymis_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500_k-means-cluster#5

LUC7L3 BCLAF1 TTC14 SRSF11 PRPF38B

3.49e-04186695Facebase_RNAseq_e10.5_Mandibular Arch_500_K5
CoexpressionAtlasfacebase_RNAseq_e10.5_NeuroEpith_central_2500_K4

SRRM1 SP4 PPIG LUC7L3 CLK2 CPSF6 BCLAF1 RBMX2 MEPCE FIP1L1 PRPF38B GPATCH8 WNK2

4.12e-0413706913facebase_RNAseq_e10.5_NeuroEpith_central_2500_K4
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2

SRRM1 PPIG SRSF10 TRA2B CLK4 SRSF11 PRPF38B RSRC1

4.75e-04564698Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
CoexpressionAtlasDevelopingGonad_e18.5_ovary_emap-12283_k-means-cluster#2_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B SRSF11 NKTR

6.07e-04210695gudmap_developingGonad_e18.5_ovary_1000_k2
CoexpressionAtlasDevelopingGonad_e11.5_ovary + mesonephros_emap-3226_k-means-cluster#2_top-relative-expression-ranked_1000

SRRM1 SRSF3 TRA2B FIP1L1 SRSF11 NKTR

6.34e-04323696gudmap_developingGonad_e11.5_ovary + mesonephros_k2_1000
CoexpressionAtlasDevelopingGonad_e14.5_ ovary_emap-6699_top-relative-expression-ranked_1000

SP4 TRA2B ZRSR2 BCLAF1 LUC7L2 FIP1L1 SRSF11 NKTR RSRC2

8.84e-04776699gudmap_developingGonad_e14.5_ ovary_1000
CoexpressionAtlasDevelopingGonad_e16.5_ovary_emap-9563_k-means-cluster#2_top-relative-expression-ranked_1000

SRRM1 TRA2B LUC7L3 SRSF11 NKTR

9.13e-04230695gudmap_developingGonad_e16.5_ovary_1000_k2
CoexpressionAtlasDevelopingGonad_P2_epididymis_emap-30199_k-means-cluster#2_top-relative-expression-ranked_500

SRRM1 TRA2B NOX4 SRSF11

1.01e-03136694gudmap_developingGonad_P2_epididymis_500_k2
CoexpressionAtlasFacebaseRNAseq_e10.5_Mandibular Arch_top-relative-expression-ranked_500

LUC7L3 BCLAF1 PLCH2 TTC14 SRSF11 PRPF38B SRRM3

1.07e-03492697Facebase_RNAseq_e10.5_Mandibular Arch_500
CoexpressionAtlasDevelopingGonad_e11.5_ovary + mesonephros_emap-3226_top-relative-expression-ranked_1000

SRRM1 SRSF10 SRSF3 TRA2B BCLAF1 LUC7L2 FIP1L1 SRSF11 NKTR

1.25e-03815699gudmap_developingGonad_e11.5_ovary + mesonephros_1000
CoexpressionAtlasratio_EmbryoidBody-blastocyst_vs_EmbryoidBody-fibro_top-relative-expression-ranked_2500_k-means-cluster#1

RIN3 CLK4 CCNL1 PHRF1 FIP1L1 PRPF38B RSRC2 RBM23 SCAF4 CPSF7

1.32e-039936910ratio_EB-blastocyst_vs_EB-fibro_2500_K1
ToppCellCOVID-19_Severe-PLT_4|COVID-19_Severe / Disease Group and Platelet Clusters

SRRM1 PPIG SRSF10 SRSF3 TRA2B LUC7L3 CLK4 C16orf87 TRA2A FIP1L1 SREK1 RSRC2

3.21e-161987012abfddbee99ef8c7719e6e6f62571e9be030e4acf
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

CEP350 SETD2 SRSF10 TRA2B CDK13 BCLAF1 CCNL1 SRSF11 NKTR SREK1 RSRC2 SON

3.62e-16200701212f1685ce8f218433068e090c9d839cd5a1910bf
ToppCellCOVID-19_Severe-PLT_4|World / Disease Group and Platelet Clusters

SRRM1 PPIG SRSF10 SRSF3 TRA2B LUC7L3 CLK4 TRA2A FIP1L1 SREK1 RSRC2

1.40e-141967011ad43efdd4d73b6615f65f06a315b33576e317473
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

CEP350 PPIG LUC7L3 ZRSR2 CCNL1 SRSF11 PRPF38B NKTR SREK1 RSRC2

6.50e-1319770100fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SRRM1 PPIG TRA2B LUC7L3 CCNL1 SRSF11 PRPF38B RSRC2 SON

1.67e-11188709d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCellCOVID-19_Convalescent-PLT_4|COVID-19_Convalescent / Disease Group and Platelet Clusters

SRSF10 SRSF3 TRA2B CCNL1 TRA2A FIP1L1 SREK1 RSRC2 TOPORS

2.22e-11194709ce1fad4e76a87f0c35e430ed1f2262395df882fd
ToppCellCOVID-19_Mild-PLT_4|COVID-19_Mild / Disease Group and Platelet Clusters

SRRM1 SRSF10 SRSF3 TRA2B LUC7L3 TRA2A FIP1L1 SREK1 RSRC2

2.66e-111987093d8c33dba759df0974aeb2b9a6b5167ae7a18e1f
ToppCellCOVID-19|World / Disease, condition lineage and cell class

SETD2 SRSF10 TRA2B CDK13 BCLAF1 CCNL1 SREK1 RSRC2 SON

2.91e-112007097dec470c379cd89f05a0f37c8628b21f136e52f0
ToppCellCOVID-19_Convalescent-PLT_4|World / Disease Group and Platelet Clusters

ZNF8 SP4 SRSF3 TRA2B TRA2A SREK1 RSRC2 TOPORS

5.56e-101867085954a1e3ffafb33f2a9bc87af3343f304fda4c92
ToppCellsevere-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

SRSF10 LUC7L3 CDK13 CCNL1 TTC14 SRSF11 NKTR SREK1

8.77e-1019770857ebd552f10d6278623b52a3d484d4b91ae1d028
ToppCellmild-low-quality_cells|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

SRSF10 LUC7L3 CDK13 CCNL1 TTC14 SRSF11 NKTR SREK1

9.49e-10199708f0b0097df0026496470a80d8cc9375ffd8389b00
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25|PBMC_fresh-frozen / Compartment, severity and other cell annotations on 10x 3' data (130k)

SETD2 SRSF10 BCLAF1 CCNL1 SRSF11 NKTR RSRC2

2.13e-081917071ecd9849d14d5ebf3daf610e83fb50820cafd3ed
ToppCellH1299-infected|H1299 / Cell line, Condition and Strain

LUC7L3 CCNL1 SRSF11 PRPF38B NKTR SREK1 SON

2.21e-081927079cf8049bdc3e0f81ce69042beac72b08d8f38b4e
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

SRRM1 SRSF10 BCLAF1 CCNL1 NKTR SREK1 RSRC2

2.63e-081977075c33454b10023decd2f5ccda9229b6512659711e
ToppCell10x3'2.3-week_17-19-Lymphocytic_B|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

SRRM1 SRSF10 SRSF3 TRA2B CDK13 TRA2A RSRC2

2.73e-081987075f465cf5c7493e32d9afe9e9d05757d0a95acc33
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

SRRM1 SRSF10 SRSF3 TRA2B CDK13 TRA2A RSRC2

2.73e-0819870777ce3fe1ab161c0faf8987e73a64ab61294b9255
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

SRRM1 SRSF10 BCLAF1 CCNL1 NKTR SREK1 RSRC2

2.73e-0819870744417089b62056269cac38d3134ff209c05b7007
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

SRRM1 SRSF10 BCLAF1 CCNL1 NKTR SREK1 RSRC2

2.73e-0819870728ef3fc4c17dcb765537b75917f7db78baa522db
ToppCelldroplet-Bladder-nan|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SRRM1 PPIG TRA2B CCNL1 RSRC2 SON

5.00e-07187706663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCellcontrol-Lymphoid-CTL|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

CDK13 RBL2 BCLAF1 PRPF38B RSRC1 SON

6.02e-0719370689d407a88b5956559a589425b89b3eb8dc78e1dd
ToppCellCOVID-19_Mild-PLT_4|World / Disease Group and Platelet Clusters

SRSF3 TRA2B TRA2A FIP1L1 SREK1 RSRC2

6.02e-0719370698a52523aa1efd5d14a2878ed106828a80a33aa2
ToppCellControl-PLT_4|Control / Disease Group and Platelet Clusters

PPIG SRSF3 TRA2B TRA2A SREK1 RSRC2

6.98e-07198706387fd3037fd52e4d4c42de0588767e58af228b59
ToppCellPBMC_fresh-frozen|World / Compartment, severity and other cell annotations on 10x 3' data (130k)

SRRM1 TRA2B LUC7L3 SRSF11 NKTR SON

6.98e-07198706dcc223a0396b8b673e4ed8c6733ec6cd74e9a03a
ToppCell10x3'2.3-week_17-19-Lymphocytic_B-B_lineage-pre_B_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

SRRM1 SRSF10 SRSF3 C16orf87 TRA2A RSRC2

7.19e-07199706dd94e42b62af7cbd69c472681d3c758552694ae2
ToppCellsevere|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

SRRM1 TRA2B BCLAF1 CCNL1 RSRC2 SON

7.41e-07200706accc618d6b960bff30cb531c1226295bfc8650f6
ToppCell3'_v3-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

LUC7L3 CCNL1 TTC14 NKTR SREK1

3.55e-0614770594998bc40f5c08295cfe3bdcbe43f13b1e564b3d
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CEP350 SETD2 BCLAF1 CCNL1 DDX23

1.06e-051847051154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellBrain_organoid-organoid_Kanton_Nature|Brain_organoid / Sample Type, Dataset, Time_group, and Cell type.

SRSF10 TRA2B AKAP17A LUC7L2 NKTR

1.09e-05185705857c7ca8493e91ef1d0078ddafd6082020f9b169
ToppCellILEUM-inflamed-(3)_MNP-(3)_moDC|(3)_MNP / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TRA2B TRA2A NKTR SREK1 SCAF4

1.14e-051877050099def970fbc828756fbf853eca2ce77b8cd342
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

U2AF1 BCLAF1 CCNL1 NKTR SREK1

1.17e-05188705ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCellILEUM-non-inflamed-(1)_T_cell-(1)_CD8_Trm|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TRA2B LUC7L3 BCLAF1 TRA2A NKTR

1.20e-051897052c8a2fb76ea002bac554bc1c761ce960b5e116e1
ToppCellsevere-low-quality_cells|severe / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

LUC7L3 CDK13 TTC14 SRSF11 NKTR

1.33e-051937059337bc93e3904c7fc7c93c328518bcd6453b1e8c
ToppCell10x3'2.3|World / cell types per 3 fetal stages;per 3',per 5'

SRSF3 TRA2B CCNL1 TRA2A RSRC2

1.36e-05194705fc7ed8350ffe1475b8934dfbb107b51991876b0b
ToppCell10x3'2.3-week_17-19|World / cell types per 3 fetal stages;per 3',per 5'

SRSF3 TRA2B CCNL1 TRA2A RSRC2

1.47e-05197705f5cfad0b42d0f817e22cc78b9bfb2b4b7e4330ed
ToppCellCOVID-19_Mild-Classical_Monocyte-cMono_4|Classical_Monocyte / Disease condition and Cell class

SRRM1 SRSF4 BCLAF1 NKTR SREK1

1.47e-05197705e666f6580e9a20b5e550f02125706db17eec8510
ToppCell10x3'2.3-week_12-13-Lymphocytic_B-B_lineage-pre_B_progenitor|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

SRSF10 SRSF3 SRSF11 RSRC2 SON

1.47e-05197705106b0f9a0425facc634feb7498c9ba2c55edfbf8
ToppCellControl_saline-Endothelial-Endothelial-Activated_Gen_Cap|Control_saline / Treatment groups by lineage, cell group, cell type

TRA2B CCNL1 MEPCE PRPF38B TOPORS

1.51e-051987053c3a5d2555f6af4aa33f9ea778808315d0e39d86
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

CEP350 SRRM1 PPIG BCLAF1 PRPF38B

1.51e-0519870576d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCellmoderate-Lymphoid-CTL|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

RBL2 CCNL1 PRPF38B NKTR SON

1.51e-051987050a868098b1ee4b28b2149ed766acb09e9c0ce14c
ToppCellcontrol-Epithelial-Secretory|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

PHF20L1 LUC7L3 SRSF11 PRPF38B NKTR

1.54e-051997053d01f90ffd271ca00129192787e4921bdca7e01e
ToppCellmegakaryocytic-CD34+_Megakaryoblast|megakaryocytic / Lineage and Cell class

PPIG SRSF10 LUC7L3 BCLAF1 SRSF11

1.54e-0519970599a65887d3c8a2cde26693dd74404b101bba9d58
ToppCelldroplet-Pancreas-Endocrine-18m-Epithelial-nan|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L3 CLK2 TTC14 SON

1.36e-0416670466026988509e39e41274fa0de738383219e8ff30
ToppCellChildren_(3_yrs)-Epithelial-lung_neuroendocrine_cell_(PNEC)-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

LAD1 GRIK5 SRRM3 WNK2

1.45e-0416970496a2aec9acf8a6f966973c035e5ade456cf47772
ToppCell3'_v3-lymph-node_spleen|World / Manually curated celltypes from each tissue

TRA2B CDK13 CCNL1 NKTR

1.52e-041717047aae88da5b37c20f10118325a048f08906be994c
ToppCell5'-Adult-LymphNode-Hematopoietic-T_cells-gdT|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

RIN3 RBL2 GPATCH8 SCAF4

1.62e-04174704ccc79febfcf588d8294ffc712338be96de8a5033
ToppCelldroplet-Limb_Muscle-MUSCLE-30m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SRRM1 BCLAF1 DDX23 RSRC2

1.77e-0417870401dafd19de04eff459253eaa9a35debf8f3deedf
ToppCellILEUM-inflamed-(1)_T_cell-(1)_CD8_Trm|(1)_T_cell / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

TRA2B BCLAF1 TRA2A NKTR

2.01e-04184704cef3ee2a4a0af961aa3b4c92150d423e841ae8c1
ToppCellTCGA-Lung-Primary_Tumor-Lung_Carcinoma-Lung_Squamous_Cell_Carcinoma-3|TCGA-Lung / Sample_Type by Project: Shred V9

FXR1 TRA2B PTDSS1 WNK2

2.01e-04184704ea4ccebe2d54279fcc517e4f0bfa652b91a808bb
ToppCell390C-Lymphocytic-CD4_T-cell-Treg_cell_1|390C / Donor, Lineage, Cell class and subclass (all cells)

TIAM1 CDK13 RBL2 CCDC9

2.10e-04186704064b6047215597465bb51a8a1547ef5a226552f9
ToppCell10x_3'_v2v3-Neoplastic-Stem-like-NPC-like-NPC-like_neural-B|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

FIP1L1 TOPORS SRRM3 WNK2

2.23e-041897048e6b6025f5554672e26a5d19fe365acb4333789c
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c03-ITGA4|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

SETD2 AKAP17A RBL2 C16orf87

2.27e-0419070491ba66d4b56c59523485b17738e93f14bb00afa4
ToppCellhuman_hepatoblastoma-Tumor_cells|World / Sample and Cell Type and Tumor Cluster (all cells)

LUC7L3 CPSF6 NKTR SREK1

2.36e-04192704916fbec1c7ab7969bda711886ac88e877e30c280
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

CCNL1 SRSF11 NKTR SREK1

2.36e-0419270447646d7e4990be85072987f92bf18d52f8da752e
ToppCelldroplet-Pancreas-Endocrine|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 TTC14 NKTR SON

2.36e-041927040dfd1e9896c34aee0f842f8de5d0e3af62a15f68
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 SRSF11 NKTR SON

2.41e-04193704fe451b3295d77b2bd1ac25cf29310c85835a45fe
ToppCellhuman_hepatoblastoma|World / Sample and Cell Type and Tumor Cluster (all cells)

LUC7L3 CPSF6 NKTR SREK1

2.41e-04193704e6a688bc834f845ff64dae1be64f073eec5091a1
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 SRSF11 NKTR SON

2.41e-04193704471e65f02937bc18d7c5facdacdf1df58cf0f839
ToppCellremission|World / disease stage, cell group and cell class

LUC7L3 RBL2 TTC14 NKTR

2.41e-0419370486cfd0c230ba96a43d343216935952fff6a5254e
ToppCelldroplet-Pancreas-Endocrine-21m|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 SRSF11 NKTR SON

2.46e-041947043a3ecedcdc7691cf21775818b598208fcb980c29
ToppCelldroplet-Limb_Muscle-MUSCLE|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 TTC14 RSRC2 SON

2.46e-04194704e3d63874111d1e8da3977329426e4dcf68d6de87
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LUC7L2 SRSF11 NKTR SON

2.46e-041947040b023de48ed8a550d169bbe954881eb04bf4f981
ToppCell(1)_T_cells-(1)_T_CD4_naive|(1)_T_cells / Spleen cell shreds - cell class (v1) and cell subclass (v1)

SETD2 LUC7L3 TTC14 NKTR

2.51e-04195704d3fa551bc6f5ee5890af1040415e61ecd5d46201
ToppCelldroplet-Limb_Muscle-MUSCLE-30m-Mesenchymal|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

BCLAF1 ECM2 CCNL1 NKTR

2.51e-041957045c86fddd6d0530beecf45ea5ba6b823123847696
ToppCelllymphoid-T_cell-unlabelled(multiplets)|World / Lineage, cell class and subclass

SRRM1 SRSF3 TRA2B RSRC2

2.56e-0419670478b006922307c154622d71fcbc79ae5eed3f4b23
ToppCellmoderate-Lymphoid-Treg|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

CCNL1 TTC14 PRPF38B NKTR

2.56e-041967049152f4a8a27ff4ee28f231c5ad00eb2edd9ea6da
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)

LUC7L3 NKTR GPATCH8 SON

2.56e-04196704a9157809122e6fc5783a291522f103bef30943e4
ToppCellControl-Classical_Monocyte-cMono_2|Classical_Monocyte / Disease condition and Cell class

TRA2B BCLAF1 CCNL1 SON

2.61e-04197704eb7610c9496a95a5fd866e16abcbc39b83abe617
ToppCellCOVID_non-vent-Lymphocytic-T_cell-CD4+_Naive_T_cell|COVID_non-vent / Disease condition, Lineage, Cell class and subclass

LUC7L3 RBL2 SRSF11 NKTR

2.61e-04197704836dd8110d5689f944ad1d301def38c32278b5b5
ToppCellPBMC|World / Compartment, Disease Groups and Clusters

SRSF3 TRA2B BCLAF1 CCNL1

2.66e-0419870484f5b43dad0c57556171dbc0b799735654582ecf
ToppCellkidney_cells-CKD+DKD_normotensive-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell-Adaptive_/_Maladaptive_/_Repairing_Proximal_Tubule_Epithelial_Cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

LUC7L3 SRSF11 GPATCH8 SON

2.71e-04199704174f6013af6eafa577f84205a62927f2b367fda3
ToppCellHealthy/Control|World / Disease group and Cell class

SRRM1 LUC7L3 TTC14 NKTR

2.71e-041997042623c42b3e79e401a485879b52e8bbcbc581544d
ToppCellCOVID_vent-Lymphocytic-T_cell-CD4+_Naive_T_cell|COVID_vent / Disease condition, Lineage, Cell class and subclass

LUC7L3 RBL2 CCNL1 NKTR

2.71e-04199704885bc902b6e2af0b61e452c4154160cd3f1cf98e
ToppCellhuman_hepatoblastoma-Tumor_cells-T9|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

FXR1 TRA2B CCNL1 RSRC2

2.71e-04199704e9c83555d2197b740797a9f33b64f8f7a7ba1ee2
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

CEP350 SRRM1 PPIG BCLAF1

2.71e-04199704c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

CEP350 SRRM1 PPIG BCLAF1

2.71e-04199704fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCellTCGA-Bile_Duct-Primary_Tumor|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

SCAF1 RBMX2 DDX23 U2AF2

2.76e-042007040350e5ffd36033099b7e32a1fdd790fff99790dc
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuronal-Intermediate|6m / Sample Type, Dataset, Time_group, and Cell type.

FXR1 BCLAF1 CCNL1 RSRC2

2.76e-042007047c261e39ac30b318511373ab7302aa53b8b81b9c
ToppCellTCGA-Bile_Duct-Primary_Tumor-Cholangiocarcinoma|TCGA-Bile_Duct / Sample_Type by Project: Shred V9

SCAF1 RBMX2 DDX23 U2AF2

2.76e-04200704ad2a6da0b1ae7a9212a3c91e5eec4baa7481d8dc
ToppCellCOVID-19-COVID-19_Mild|COVID-19 / Disease, condition lineage and cell class

SRRM1 BCLAF1 CCNL1 NKTR

2.76e-0420070462c25042086f1afd1102e0720e933c2e476468fd
ComputationalRNA splicing.

U2AF1 SRSF10 SRSF3 TRA2B DDX23 SRSF11

7.95e-0765546MODULE_183
ComputationalNeighborhood of HDAC1

SRRM1 SRSF10 SRSF3 SRSF4 TRA2B CLK2 TRA2A

1.16e-06110547GNF2_HDAC1
ComputationalNeighborhood of G22P1

U2AF1 SRSF3 TRA2B CPSF6

2.97e-0536544GNF2_G22P1
ComputationalNeighborhood of APEX1

U2AF1 SRSF10 SRSF3 TRA2B CPSF6

9.35e-0592545GNF2_APEX1
ComputationalNeighborhood of APEX1

FXR1 SRSF3 SRSF4 TRA2B BCLAF1

2.57e-04114545GCM_APEX1
ComputationalNeighborhood of ACTG1

U2AF1 FXR1 TRA2B BCLAF1 DHX38

3.79e-04124545GCM_ACTG1
ComputationalNeighborhood of ACP1

SRRM1 U2AF1 PPIG SRSF3 TRA2B DHX38

6.27e-04211546MORF_ACP1
ComputationalNeighborhood of TDG

SRSF3 TRA2B CPSF6

7.00e-0435543GNF2_TDG
ComputationalGenes in the cancer module 98.

SRSF10 SRSF3 TRA2B CLK2 CPSF6 DDX23 SRSF11 SON

7.08e-04393548MODULE_98
ComputationalNeighborhood of FBL

SRRM1 SRSF10 SRSF3 TRA2B CPSF6

7.99e-04146545GNF2_FBL
ComputationalNeighborhood of RAD21

SRSF4 TRA2B BCLAF1

8.25e-0437543GCM_RAD21
ComputationalNeighborhood of UBE2N

SRRM1 U2AF1 SRSF3 TRA2B

1.29e-0395544MORF_UBE2N
ComputationalNeighborhood of UBE2I

U2AF1 SRSF3 TRA2B

1.37e-0344543GNF2_UBE2I
ComputationalNeighborhood of MLL

PPIG LUC7L3 CLK4 TTC14 MEPCE

1.75e-03174545GCM_MLL
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

CEP350 LUC7L3 SON

1.88e-0349543GAVISH_3CA_MALIGNANT_METAPROGRAM_41_UNASSIGNED
ComputationalGenes upregulated in subsets of cells of a given type within various tumors

CDK13 CCNL1 NKTR

1.99e-0350543GAVISH_3CA_METAPROGRAM_B_CELLS_B_CELLS_1
ComputationalNeighborhood of DEK

SRRM1 U2AF1 SRSF3 TRA2B DHX38 SON

1.99e-03264546MORF_DEK
ComputationalNeighborhood of DAP3

SRRM1 SRSF3 TRA2B CPSF6

2.95e-03119544GNF2_DAP3
ComputationalNeighborhood of DEK

SRSF3 TRA2B CPSF6

3.04e-0358543GNF2_DEK
DrugAC1NRA5C

U2AF1 SRSF10 SRSF3 SRSF4 TRA2B AKAP17A CDK13 CCNL1 TRA2A U2AF2 SREK1 RBM23 SRSF12

6.27e-151747013CID005287709
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A_EA

SRSF4 CDK13 LUC7L2 MEPCE DDX23 SREK1 RBM23 SON

5.71e-081727081072_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 CDK13 LUC7L2 LAD1 MEPCE U2AF2 SREK1 RBM23

5.71e-081727086993_DN
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A_EA

SRSF4 CDK13 LUC7L2 CLK4 MEPCE SREK1 RBM23

1.12e-061757071058_DN
DrugCaptopril [62571-86-2]; Down 200; 17.2uM; PC3; HT_HG-U133A

PPIG FXR1 LUC7L3 NKTR GPATCH8 RSRC1 SON

1.30e-061797074585_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

SETD2 PPIG FXR1 NKTR RSRC2 RSRC1 SON

1.75e-061877074302_DN
Drug((5Z)5-(1,3-benzodioxol-5-yl)methylene-2-phenylamino-3,5-dihydro-4H-imidazol-4-one)

SRSF4 CLK2 CLK4

6.00e-0612703ctd:C578491
Drugtestosterone enanthate

PPIG FXR1 LUC7L3 RBL2 BCLAF1 DHX38 TRA2A NKTR GPATCH8 RSRC1

9.92e-065757010ctd:C004648
DrugLanatoside C [17575-22-3]; Up 200; 4uM; MCF7; HT_HG-U133A

CEP350 CLK4 CCNL1 TRA2A RSRC2 SON

1.14e-051647063852_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 LAD1 MEPCE SREK1 RBM23

1.18e-051657065625_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

SRSF4 LUC7L2 MEPCE DDX23 SREK1 RBM23

1.40e-051707061050_DN
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A

SRSF4 CDK13 LUC7L2 MEPCE SREK1 RBM23

1.60e-051747065580_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE U2AF2 SREK1 RBM23

1.65e-051757065935_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A_EA

SRSF4 CDK13 LUC7L2 MEPCE SREK1 RBM23

1.65e-051757061014_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE DDX23 SREK1 RBM23

1.76e-051777065308_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

PPIG SRSF4 CDK13 LUC7L2 MEPCE RBM23

1.82e-051787065086_DN
DrugEtifenin [63245-28-3]; Down 200; 12.4uM; PC3; HT_HG-U133A

CEP350 FXR1 RBL2 NKTR RSRC1 SON

1.82e-051787063998_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE U2AF2 SREK1 RBM23

1.82e-051787066276_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HG-U133A

SETD2 SRSF4 CLK2 MEPCE RBM23 SON

2.06e-051827061891_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE DDX23 SREK1 RBM23

2.13e-051837064770_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; HL60; HG-U133A

SETD2 LUC7L2 U2AF2 SREK1 CCDC9 SON

2.63e-051907061612_DN
DrugAmoxapine [14028-44-5]; Down 200; 12.8uM; PC3; HG-U133A

TRA2B LUC7L3 CDK13 RBL2 PRPF38B NKTR

3.22e-051977061931_DN
DrugTolnaftate [2398-96-1]; Up 200; 13uM; HL60; HG-U133A

LUC7L3 MEPCE U2AF2 SRSF11 TOPORS SCAF4

3.40e-051997062001_UP
Drug2-(ethylsulfonyl)ethanol

SRRM1 SRSF3 TRA2B TRA2A U2AF2 RBM23

4.60e-05210706CID000010549
DrugLanatoside C [17575-22-3]; Up 200; 4uM; PC3; HT_HG-U133A

TRA2B CLK4 CCNL1 TRA2A RSRC2

1.31e-041597054328_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.39e-041617054768_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.47e-041637055594_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.56e-041657056085_DN
DrugHelveticoside [630-64-8]; Up 200; 7.4uM; MCF7; HT_HG-U133A

CEP350 CLK4 CCNL1 TRA2A RSRC2

1.56e-041657053851_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.56e-041657052835_DN
DrugDigoxin [20830-75-5]; Up 200; 5.2uM; MCF7; HT_HG-U133A

CLK4 CCNL1 TRA2A GPATCH8 RSRC2

1.60e-041667055324_UP
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.65e-041677055217_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.69e-041687053868_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 LAD1 MEPCE SREK1

1.69e-041687056820_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 MEPCE GRIK5 SREK1 RBM23

1.74e-041697056064_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.79e-041707057043_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 MEPCE DDX23 SREK1 RBM23

1.84e-041717057407_DN
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A_EA

CDK13 LUC7L2 MEPCE SREK1 RBM23

1.84e-041717051000_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.84e-041717056879_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE DDX23 SREK1

1.84e-041717054954_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.89e-041727054112_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

SRSF4 LUC7L2 MEPCE RBM23 CPSF7

1.89e-041727056439_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.89e-041727052330_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 MEPCE U2AF2 SREK1 RBM23

1.89e-041727055209_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.89e-041727051637_DN
Drugmetrizoate

SCAF1 FCAMR

1.94e-047702CID000002528
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

SRSF4 CDK13 LUC7L2 MEPCE RBM23

1.94e-041737054565_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.94e-041737055336_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.99e-041747056579_DN
DrugHC toxin from Helminthosporium carbonum; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.99e-04174705909_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.99e-041747055945_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

1.99e-041747055693_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

SRSF4 LUC7L2 MEPCE RBM23 CCDC9

2.05e-041757053787_DN
DrugSAHA; Down 200; 10uM; PC3; HT_HG-U133A

SRSF4 LUC7L2 MEPCE PRPF38B RBM23

2.05e-041757051220_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.05e-041757057236_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.10e-041767053312_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

SRSF4 LUC7L2 MEPCE RBM23 CPSF7

2.10e-041767051212_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.10e-041767056784_DN
Drugtrichostatin A ; Down 200; 1uM; MCF7; HT_HG-U133A_EA

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.10e-04176705981_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 MEPCE SREK1 RBM23 SON

2.10e-041767056932_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

LUC7L2 MEPCE U2AF2 SREK1 RBM23

2.10e-041767051535_DN
Drugtrichostatin A ; Down 200; 1uM; MCF7; HT_HG-U133A_EA

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.16e-04177705873_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.16e-041777056972_DN
DrugICI 182,780; Down 200; 1uM; MCF7; HT_HG-U133A_EA

CEP350 PPIG NKTR GPATCH8 SON

2.16e-04177705985_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.16e-041777053227_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.22e-041787051471_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.22e-041787057245_DN
Drugfisetin; Down 200; 50uM; PC3; HG-U133A

SRSF4 LUC7L3 RSRC2 SON CPSF7

2.22e-04178705579_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.22e-04178705992_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.22e-041787054710_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 0.1uM; MCF7; HT_HG-U133A_EA

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.22e-041787051112_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

SETD2 SRSF4 LUC7L2 MEPCE RBM23

2.33e-041807056886_DN
Drugtrichostatin A, Streptomyces sp.; Down 200; 1uM; PC3; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.39e-041817057077_DN
DrugTrichostatin A, Streptomyces sp.; Down 200; 1uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.39e-041817056951_DN
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; PC3; HG-U133A

PPIG SRSF4 LUC7L2 MEPCE RBM23

2.46e-041827051951_DN
DrugSAHA; Down 200; 10uM; MCF7; HT_HG-U133A

SRSF4 LUC7L2 MEPCE SREK1 RBM23

2.58e-041847056939_DN
Drug2-deoxy-D-glucose; Up 200; 10000uM; MCF7; HG-U133A

SETD2 LUC7L3 RBL2 GRIK5 SON

2.71e-04186705344_UP
DrugCantharidin [56-25-7]; Down 200; 20.4uM; HL60; HT_HG-U133A

TRA2A SRSF11 RBM23 SCAF4 SON

2.78e-041877053075_DN
Drug2-propylpentanoic acid; Down 200; 10000uM; MCF7; HG-U133A

RBL2 LUC7L2 MEPCE SREK1 MEPE

2.85e-04188705345_DN
DrugNeostigmine bromide [114-80-7]; Down 200; 13.2uM; PC3; HT_HG-U133A

CEP350 RBL2 NKTR RSRC1 SON

2.85e-041887056735_DN
DrugCloperastine hydrochloride [14984-68-0]; Down 200; 11uM; PC3; HT_HG-U133A

CEP350 FXR1 RBL2 TRA2A RSRC1

2.92e-041897054271_DN
DrugSulfamethazine sodium salt [1981-58-4]; Down 200; 13.4uM; PC3; HT_HG-U133A

TIAM1 RBL2 SRSF11 NKTR RSRC2

2.99e-041907054322_DN
DrugNorgestrel-(-)-D [797-63-7]; Down 200; 12.8uM; PC3; HT_HG-U133A

SETD2 FXR1 SRSF11 NKTR RSRC1

3.07e-041917054269_DN
Drug2-propylpentanoic acid; Down 200; 1000uM; PC3; HG-U133A

PPIG DHX38 FIP1L1 SON CPSF7

3.14e-04192705458_DN
Drug0317956-0000 [391210-11-0]; Up 200; 1uM; MCF7; HT_HG-U133A

CDK13 RBL2 TRA2A U2AF2 NKTR

3.14e-041927053858_UP
DrugTrichostatin A, from Streptomyces sp.; Down 200; 0.1uM; HL60; HG-U133A

TRA2B LUC7L2 MEPCE U2AF2 SREK1

3.14e-041927051971_DN
DrugCP-690334-01 [459212-38-5]; Down 200; 10uM; MCF7; HT_HG-U133A

CEP350 ZNF8 RIN3 CDK13 SON

3.22e-041937053906_DN
DrugFlutamide [13311-84-7]; Down 200; 14.4uM; MCF7; HT_HG-U133A

CEP350 RBL2 TRA2A NKTR SON

3.30e-041947054361_DN
DrugBenfotiamine [22457-89-2]; Down 200; 8.6uM; PC3; HT_HG-U133A

RBL2 TRA2A SRSF11 NKTR RSRC1

3.30e-041947054312_DN
Drugpioglitazone HCl; Up 200; 10uM; MCF7; HT_HG-U133A

ZNF8 PHF20L1 CDK13 FIP1L1 SCAF4

3.30e-041947057523_UP
DrugBaclofen (R,S) [1134-47-0]; Down 200; 18.8uM; HL60; HG-U133A

PPIG FXR1 PTDSS1 SRSF11 NKTR

3.45e-041967052036_DN
DrugIsocorydine (+) [475-67-2]; Down 200; 11.8uM; MCF7; HT_HG-U133A

RIN3 TIAM1 CDK13 CCDC9 SCAF4

3.45e-041967052780_DN
DrugStachydrine hydrochloride; Down 200; 22.2uM; PC3; HT_HG-U133A

SETD2 RIN3 TOPORS CCDC9 SCAF4

3.45e-041967054469_DN
DrugOxybutynin chloride [1508-65-2]; Down 200; 10.2uM; HL60; HG-U133A

CEP350 FXR1 CPSF6 NKTR CCDC9

3.54e-041977051551_DN
DrugTriflusal [322-79-2]; Down 200; 16.2uM; HL60; HG-U133A

ZNF8 SETD2 SRSF11 GPATCH8 TOPORS

3.54e-041977051717_DN
DrugMedrysone [2668-66-8]; Down 200; 11.6uM; PC3; HT_HG-U133A

CEP350 FXR1 RBL2 TRA2A SRSF11

3.54e-041977054266_DN
DrugMethyldopa (L,-) [555-30-6]; Down 200; 19uM; HL60; HG-U133A

TRA2B LUC7L2 RBMX2 SRSF11 SON

3.62e-041987051619_DN
Drug5255229; Down 200; 13uM; MCF7; HT_HG-U133A_EA

PHF20L1 CLK4 LAD1 U2AF2 CPSF7

3.62e-04198705833_DN
DrugTrimethobenzamide hydrochloride [554-92-7]; Up 200; 9.4uM; HL60; HG-U133A

SRSF11 GRIK5 TOPORS SCAF4 SON

3.62e-041987052002_UP
DrugEdrophonium chloride [116-38-1]; Up 200; 19.8uM; PC3; HG-U133A

SETD2 RIN3 TRA2B NKTR RSRC1

3.70e-041997051936_UP
Diseaseright ventricular diastolic volume measurement

RBL2 LUC7L2 RSRC1

3.07e-0528643EFO_0021814
DiseaseChronic Lymphocytic Leukemia

U2AF1 ZRSR2 RBL2

2.36e-0455643C0023434
Diseasepalmitoylcarnitine measurement

CACNB4 FAM47B

9.47e-0421642EFO_0021044
Diseasebone density, lean body mass

RIN3 MEPE

9.47e-0421642EFO_0003923, EFO_0004995
Diseasemacular degeneration (is_marker_for)

SRSF10 TRA2B

1.46e-0326642DOID:4448 (is_marker_for)
DiseaseRetinitis Pigmentosa

GARIN4 DHX38 TOPORS

1.52e-03104643C0035334
DiseaseHematopoetic Myelodysplasia

U2AF1 ZRSR2

1.81e-0329642C2713368
Diseasecardiovascular disease

SRRM1 SCAF1 CACNB4 DDX23 MEPE

3.14e-03457645EFO_0000319
Diseasesystemic juvenile idiopathic arthritis

RIN3 PRICKLE2

3.43e-0340642EFO_1001999
Diseasedilated cardiomyopathy (is_implicated_in)

SP4 CACNB4

3.95e-0343642DOID:12930 (is_implicated_in)
Diseaseresponse to tenofovir

RIN3 WNK2

5.51e-0351642EFO_0009279

Protein segments in the cluster

PeptideGeneStartEntry
HRSFERSHRRISERS

C2orf16

1831

Q68DN1
SSYRSQRSSRRKHRR

CLK2

106

P49760
RRRRSRTFSRSSSQH

CLK2

121

P49760
RDRRERSRSFERSHK

CCNL1

496

Q9UK58
RARKSRNRLSSSSQH

CACNB4

466

O00305
DRRSSSGRSKERHRE

CDK13

201

Q14004
SHNKSRDRKRSRSRD

RBM23

66

Q86U06
SRSRSRDKSHRHKRA

RBMX2

291

Q9Y388
RHKRARRSRERESSN

RBMX2

301

Q9Y388
SSRKRHRSRERSPSR

CPSF7

416

Q8N684
RKRRNSGSSDSRSHQ

RBL2

936

Q08999
RRRHRNLSSTTDDEA

LAD1

31

O00515
RHRKRRRTSSKSEAG

MEPCE

361

Q7L2J0
PHSNRRFSSRRRDDS

MEPE

496

Q9NQ76
TDASESHHSTNRRRR

FXR1

491

P51114
SSHRRRTGESRHKTR

GARIN4

436

Q8IYT1
RKHRDFRSSDFSRSS

KIAA1109

2611

Q2LD37
QRRAGTKRSSRSSHR

GPATCH8

796

Q9UKJ3
QSRSRSRSHTRERSR

GPATCH8

941

Q9UKJ3
SRSRSKRRSRSTTAH

GPATCH8

966

Q9UKJ3
SDSLQRRHTSRKLRD

FAM47B

451

Q8NA70
HKSSRSNSRRRHESE

FIP1L1

541

Q6UN15
RDRRKRRSRSPSSEH

PHRF1

1156

Q9P1Y6
KRSRSRSRHSSRTSD

LUC7L3

291

O95232
RSRHSSRTSDRRCSR

LUC7L3

296

O95232
SRTSDRRCSRSRDHK

LUC7L3

301

O95232
RRSRSHDRSERKHRS

LUC7L3

331

O95232
RKHRSRSRDRRRSKS

LUC7L3

341

O95232
SRSRSKSAERERRHK

DDX23

61

Q9BUQ8
SRRTRRLLDKSRTFH

NOX4

91

Q9NPH5
RSRTHDRDRSRSKEY

PPIG

576

Q13427
RSRRSRRSRSDNALH

PRICKLE2

686

Q7Z3G6
RSSVTNRARASKDRR

FCAMR

286

Q8WWV6
RSREKSRRHKSRSRD

CPSF6

501

Q16630
RSRSNSHSDHIRRGR

C16orf87

86

Q6PH81
QHKAEASSRRRRKSS

CCDC9

336

Q9Y3X0
KRRSVSSQRSRSRSR

BCLAF1

116

Q9NYF8
HRHLQRNSERSRSKS

CEP350

481

Q5VT06
RRLRKSSTSHKHRSN

ECM2

36

O94769
SRSKSHRRKRSRSIE

CLK4

126

Q9HAZ1
HAVSCRKTSRSRRRR

GRIK5

851

Q16478
RHMSDNRKSRSRSAS

SCAF4

426

O95104
ERRRTLNKARASRSS

RIN3

861

Q8TB24
RTRSKSREKRHRHRS

LUC7L2

291

Q9Y383
SREKRHRHRSRSSSR

LUC7L2

296

Q9Y383
RSSSRSRSRSHQRSR

LUC7L2

306

Q9Y383
SRSRSHQRSRHSSRD

LUC7L2

311

Q9Y383
HQRSRHSSRDRSRER

LUC7L2

316

Q9Y383
HSSRDRSRERSKRRS

LUC7L2

321

Q9Y383
FKHSERRRRSQRLAT

PHF20L1

406

A8MW92
HRSRSRSKEGRRHES

RSRC2

61

Q7L4I2
ERKSSRGRSHSRSRS

RSRC2

116

Q7L4I2
HSRSRSRSRHSRKSR

SRSF4

191

Q08170
KRFTRSDELQRHRRT

SP4

686

Q02446
SGSRRKRRHRSRSSK

SRRM3

216

A6NNA2
RHSEAEATRARRRSR

SRRM3

541

A6NNA2
RRRSREREHQTSQDS

TMCC2

91

O75069
RSRSKSETKSRHRTR

NKTR

1316

P30414
SHSRRKRSQSKHRSR

SREK1

206

Q8WXA9
SHNRSRSRQKDRRRS

SREK1

221

Q8WXA9
RERRKSRSRSHSRDK

SREK1

246

Q8WXA9
SRSRSHSRDKRKDTR

SREK1

251

Q8WXA9
RRRSDSLKESRHRRF

SRSF12

131

Q8WXF0
ADRHKRERSRARRAS

AKAP17A

596

Q02040
SRRSHSKDRHRRERS

AKAP17A

646

Q02040
SASRKHSRHRRRSER

AKAP17A

666

Q02040
TRQRRSSGHRNDTAR

ZP1

551

P60852
TSRSLRLSHKTRRTR

TIAM1

26

Q13009
HSRSRSPNKARDRSR

SRRM5

401

B3KS81
RSRSPNKARDHSRSR

SRRM5

451

B3KS81
HSRSRSPNKARDRSR

SRRM5

461

B3KS81
RDRSRSRSPSKERDH

SRRM5

471

B3KS81
QSRSSSKERDHRRSR

SRRM5

511

B3KS81
RRQSRSSSEERDHSR

SRRM5

581

B3KS81
RERNHKPSRSFSRSR

SRSF3

141

P84103
KHRNRSFSRSKSNSR

SRSF10

166

O75494
HSRERGRRSRSTSKT

SRSF11

296

Q05519
TRRIKSCRFHRRRSS

PLEKHD1

431

A6NEE1
SSSSSRRERHRGKHR

SCAF1

621

Q9H7N4
RRSSSRSHSRVRAIA

PLCH2

1336

O75038
RSHSRVRAIASRARQ

PLCH2

1341

O75038
SSPVRRERKRSHSRS

SRRM1

186

Q8IYB3
RSRSRSRNAGKRSRS

PRPF38B

436

Q5VTL8
RSRSKSRSRSRRHSH

TRA2A

51

Q13595
KRNRSESSRSSRRHS

TTC14

506

Q96N46
RKRDRDERDRSRHSS

DHX38

166

Q92620
DERDRSRHSSRSERD

DHX38

171

Q92620
DSERSHRLSTRDRDR

DHX38

241

Q92620
KKHRSRSRSRERRSR

U2AF1

191

Q01081
SERERRRSRSHSRSE

SETD2

396

Q9BYW2
SHSRSSERSSHRRTR

RSRC1

116

Q96IZ7
SERSSHRRTRSRSRD

RSRC1

121

Q96IZ7
HRKRGRSRSSDSRSQ

TOPORS

591

Q9NS56
RSRSSDHGKRRSRSR

TOPORS

671

Q9NS56
RHRSRSLSSNRSRTA

TOPORS

766

Q9NS56
ENRHRKRSHSRSRSR

U2AF2

21

P26368
KRSHSRSRSRDRKRR

U2AF2

26

P26368
HGRSRRREQSSSRNS

ZNF8

496

P17098
RSQSRRSHRSRSQSS

ZRSR2P1

441

Q15695
RSHRSRSQSSSRCRS

ZRSR2P1

446

Q15695
HRRSTRARSRQERAS

WNK2

1171

Q9Y3S1
RHTPARSRSKEDSRR

TRA2B

31

P62995
ESHSSRRRNRHSKSK

PTDSS1

451

P48651
TSKSRERHNSRSRGR

ZRSR2

411

Q15696
SRERKRKRSSSRDNR

SON

1901

P18583