Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyBiologicalProcessdichotomous subdivision of terminal units involved in salivary gland branching

SEMA3A SEMA3C

2.95e-055362GO:0060666
DomainE3_UB_ligase_RBR

RNF19A RNF19B

1.70e-0410372IPR031127
DomainIBR

RNF19A RNF19B

3.42e-0414372PF01485
DomainIBR

RNF19A RNF19B

3.42e-0414372SM00647
DomainIBR_dom

RNF19A RNF19B

3.95e-0415372IPR002867
Domain-

SEMA3A NBAS SEMA3C DMXL2 EIF3B

4.77e-043333752.130.10.10
DomainWD40/YVTN_repeat-like_dom

SEMA3A NBAS SEMA3C DMXL2 EIF3B

4.90e-04335375IPR015943
DomainSemaphorin

SEMA3A SEMA3C

7.09e-0420372IPR027231
DomainIG

SEMA3A CD79B SEMA3C MILR1 PECAM1

1.37e-03421375SM00409
DomainIg_sub

SEMA3A CD79B SEMA3C MILR1 PECAM1

1.37e-03421375IPR003599
DomainSEMA

SEMA3A SEMA3C

1.71e-0331372PS51004
DomainSema

SEMA3A SEMA3C

1.71e-0331372SM00630
DomainSemap_dom

SEMA3A SEMA3C

1.71e-0331372IPR001627
DomainSema

SEMA3A SEMA3C

1.71e-0331372PF01403
DomainIG_LIKE

SEMA3A CD79B SEMA3C MILR1 PECAM1

2.68e-03491375PS50835
DomainIg-like_dom

SEMA3A CD79B SEMA3C MILR1 PECAM1

2.97e-03503375IPR007110
DomainPSI

SEMA3A SEMA3C

3.43e-0344372IPR016201
DomainPSI

SEMA3A SEMA3C

3.74e-0346372SM00423
DomainIg_2

MILR1 PECAM1

9.19e-0373372PF13895
Domain-

SEMA3A CD79B SEMA3C MILR1 PECAM1

9.45e-036633752.60.40.10
DomainIg-like_fold

SEMA3A CD79B SEMA3C MILR1 PECAM1

1.22e-02706375IPR013783
DomainWD_REPEATS_1

NBAS DMXL2 EIF3B

1.75e-02278373PS00678
DomainWD_REPEATS_2

NBAS DMXL2 EIF3B

1.76e-02279373PS50082
DomainWD_REPEATS_REGION

NBAS DMXL2 EIF3B

1.76e-02279373PS50294
Pubmed

Vascular endothelial growth factor controls neuronal migration and cooperates with Sema3A to pattern distinct compartments of the facial nerve.

SEMA3A SEMA3C PECAM1

4.20e-08738315545635
Pubmed

Neuropilin-1 conveys semaphorin and VEGF signaling during neural and cardiovascular development.

SEMA3A SEMA3C PECAM1

6.71e-08838312852851
Pubmed

Sequencing analysis of forty-eight human image cDNA clones similar to Drosophila mutant protein.

TWIST2 NLK KCNH5

6.71e-08838310524757
Pubmed

Semaphorin 3E and plexin-D1 control vascular pattern independently of neuropilins.

SEMA3A SEMA3C PECAM1

1.44e-071038315550623
Pubmed

Canonical Notch signaling in the developing lung is required for determination of arterial smooth muscle cells and selection of Clara versus ciliated cell fate.

TWIST2 HES1 PECAM1

8.10e-071738320048339
Pubmed

PlexinD1 and semaphorin signaling are required in endothelial cells for cardiovascular development.

SEMA3A SEMA3C PECAM1

1.15e-061938315239958
Pubmed

Yolk sac angiogenic defect and intra-embryonic apoptosis in mice lacking the Ets-related factor TEL.

ETV6 PECAM1

1.16e-0623829250681
Pubmed

Increased class 3 semaphorin expression modulates the invasive and adhesive properties of prostate cancer cells.

SEMA3A SEMA3C

1.16e-06238217390026
Pubmed

Motor neurons use push-pull signals to direct vascular remodeling critical for their connectivity.

SEMA3A SEMA3C PECAM1

1.58e-062138336240771
Pubmed

Loss of semaphorin-neuropilin-1 signaling causes dysmorphic vascularization reminiscent of alveolar capillary dysplasia.

SEMA3A SEMA3C PECAM1

2.40e-062438323063659
Pubmed

Motor innervation directs the correct development of the mouse sympathetic nervous system.

SEMA3A SEMA3C PECAM1

2.72e-062538339152112
Pubmed

Canonical Notch signaling controls the early thymic epithelial progenitor cell state and emergence of the medullary epithelial lineage in fetal thymus development.

HES1 KRT8 PECAM1

3.07e-062638332467237
Pubmed

The influence of neuropilin-1 silencing on semaphorin 3A and 3C activity in B16(F10) murine melanoma cells.

SEMA3A SEMA3C

3.48e-06338222082309
Pubmed

Class 3 semaphorins control vascular morphogenesis by inhibiting integrin function.

SEMA3A PECAM1

3.48e-06338212879061
Pubmed

Expression of semaphorin 3A and its receptors in the human intervertebral disc: potential role in regulating neural ingrowth in the degenerate intervertebral disc.

SEMA3A PECAM1

3.48e-06338220051117
Pubmed

Integration of repulsive guidance cues generates avascular zones that shape mammalian blood vessels.

SEMA3A SEMA3C PECAM1

5.30e-063138322076636
Pubmed

Maternal IL-33 critically regulates tissue remodeling and type 2 immune responses in the uterus during early pregnancy in mice.

KRT8 PECAM1

6.96e-06438235994660
Pubmed

Sema3a-Nrp1 Signaling Mediates Fast-Twitch Myofiber Specificity of Tw2+ Cells.

SEMA3A TWIST2

6.96e-06438231474563
Pubmed

Human malignant glioma cells express semaphorins and their receptors, neuropilins and plexins.

SEMA3A SEMA3C

6.96e-06438212730958
Pubmed

Semaphorins act as attractive and repulsive guidance signals during the development of cortical projections.

SEMA3A SEMA3C

6.96e-0643829811588
Pubmed

Generation of a complete thymic microenvironment by MTS24(+) thymic epithelial cells.

KRT8 PECAM1

1.16e-05538212068292
Pubmed

Neuropilin-2, a novel member of the neuropilin family, is a high affinity receptor for the semaphorins Sema E and Sema IV but not Sema III.

SEMA3A SEMA3C

1.16e-0553829331348
Pubmed

Distinct roles for S100a8 in early embryo development and in the maternal deciduum.

KRT8 PECAM1

1.16e-05538222016186
Pubmed

The del22q11.2 candidate gene Tbx1 controls regional outflow tract identity and coronary artery patterning.

SEMA3C PECAM1

1.16e-05538218583714
Pubmed

Sinusoid development and morphogenesis may be stimulated by VEGF-Flk-1 signaling during fetal mouse liver development.

KRT8 PECAM1

1.16e-05538219918884
Pubmed

A novel class of murine semaphorins with homology to thrombospondin is differentially expressed during early embryogenesis.

SEMA3A SEMA3C

1.16e-0553828817451
Pubmed

Coronary stem development in wild-type and Tbx1 null mouse hearts.

SEMA3C PECAM1

1.74e-05638226708418
Pubmed

Possible roles of Plexin-A4 in positioning of oligodendrocyte precursor cells in developing cerebral cortex.

SEMA3A PECAM1

1.74e-05638222516460
Pubmed

Expression of class 3 semaphorins and neuropilin receptors in the developing mouse tooth.

SEMA3A SEMA3C

1.74e-05638211231073
Pubmed

Murine semaphorin D/collapsin is a member of a diverse gene family and creates domains inhibitory for axonal extension.

SEMA3A SEMA3C

1.74e-0563827748561
Pubmed

The guidance molecule Semaphorin3A is differentially involved in the arealization of the mouse and primate neocortex.

SEMA3A SEMA3C

1.74e-05638223709645
Pubmed

Notch pathway signaling in the skin antagonizes Merkel cell development.

HES1 KRT8

1.74e-05638229241683
Pubmed

Diverse gene expression and function of semaphorins in developing lung: positive and negative regulatory roles of semaphorins in lung branching morphogenesis.

SEMA3A SEMA3C

1.74e-05638211442635
Pubmed

Hes1 and Hes5 regulate vascular remodeling and arterial specification of endothelial cells in brain vascular development.

HES1 PECAM1

1.74e-05638223871867
Pubmed

An unexpected role of semaphorin3a-neuropilin-1 signaling in lymphatic vessel maturation and valve formation.

SEMA3A PECAM1

1.74e-05638222723300
Pubmed

Selective requirements for NRP1 ligands during neurovascular patterning.

SEMA3A PECAM1

2.43e-05738217428830
Pubmed

Three chemokine receptors cooperatively regulate homing of hematopoietic progenitors to the embryonic mouse thymus.

KRT8 PECAM1

2.43e-05738221502490
Pubmed

Programmed Cell Senescence in the Mouse Developing Spinal Cord and Notochord.

HES1 PECAM1

2.43e-05738233575260
Pubmed

PlexinA1 is crucial for the midline crossing of callosal axons during corpus callosum development in BALB/cAJ mice.

SEMA3A SEMA3C

2.43e-05738231430342
Pubmed

Expression of secreted semaphorins and their receptors in specific neuromeres, boundaries, and neuronal groups in the developing mouse and chick brain.

SEMA3A SEMA3C

2.43e-05738216360650
Pubmed

Repulsive Sema3E-Plexin-D1 signaling coordinates both axonal extension and steering via activating an autoregulatory factor, Mtss1.

SEMA3C PECAM1

2.43e-05738238526535
Pubmed

Invariant Sema5A inhibition serves an ensheathing function during optic nerve development.

SEMA3A SEMA3C

3.24e-05838212506007
Pubmed

Sox17 is required for normal pulmonary vascular morphogenesis.

TWIST2 PECAM1

3.24e-05838224418654
Pubmed

Semaphorins III and IV repel hippocampal axons via two distinct receptors.

SEMA3A SEMA3C

3.24e-0583829753685
Pubmed

Neuropilin-2 mediates axonal fasciculation, zonal segregation, but not axonal convergence, of primary accessory olfactory neurons.

SEMA3A SEMA3C

3.24e-05838211906695
Pubmed

Integration of opposing semaphorin guidance cues in cortical axons.

SEMA3A SEMA3C

3.24e-05838222368082
Pubmed

Combined in silico and in vivo analyses reveal role of Hes1 in taste cell differentiation.

HES1 KRT8

4.16e-05938219343206
Pubmed

The sensory innervation of the mouse spinal cord may be patterned by differential expression of and differential responsiveness to semaphorins.

SEMA3A SEMA3C

4.16e-0593828812066
Pubmed

Coordination between CCR7- and CCR9-mediated chemokine signals in prevascular fetal thymus colonization.

KRT8 PECAM1

4.16e-05938216809609
Pubmed

Cardia bifida, defective heart development and abnormal neural crest migration in embryos lacking hypoxia-inducible factor-1alpha.

SEMA3A PECAM1

4.16e-05938214659802
Pubmed

Uterine-specific Ezh2 deletion enhances stromal cell senescence and impairs placentation, resulting in pregnancy loss.

KRT8 PECAM1

4.16e-05938237360688
Pubmed

A Snail1/Notch1 signalling axis controls embryonic vascular development.

TWIST2 PECAM1

4.16e-05938224894949
Pubmed

Multiple roles of mouse Numb in tuning developmental cell fates.

HES1 PECAM1

4.16e-05938211412999
Pubmed

Functional consequences of cell type-restricted expression of laminin α5 in mouse placental labyrinth and kidney glomerular capillaries.

KRT8 PECAM1

5.20e-051038222911783
Pubmed

NRP1 Regulates CDC42 Activation to Promote Filopodia Formation in Endothelial Tip Cells.

HES1 PECAM1

5.20e-051038226051942
Pubmed

Reconstitution of the embryonic kidney identifies a donor cell contribution to the renal vasculature upon transplantation.

KRT8 PECAM1

5.20e-051038230718617
Pubmed

Jagged1 in the portal vein mesenchyme regulates intrahepatic bile duct development: insights into Alagille syndrome.

HES1 KRT8

5.20e-051038221062863
Pubmed

Defective cardiovascular development and elevated cyclin E and Notch proteins in mice lacking the Fbw7 F-box protein.

HES1 PECAM1

5.20e-051038214766969
Pubmed

Sox2 is required for development of taste bud sensory cells.

ADH7 KRT8

5.20e-051038217015430
Pubmed

The fate of Notch-deficient nephrogenic progenitor cells during metanephric kidney development.

HES1 PECAM1

5.20e-051038221270765
Pubmed

Increased expression of angiogenic genes in the brains of mouse meg3-null embryos.

HES1 PECAM1

5.20e-051038220392836
Pubmed

Class 3 semaphorins negatively regulate dermal lymphatic network formation.

SEMA3C PECAM1

6.35e-051138226319580
Pubmed

Interleukin-11 signaling is required for the differentiation of natural killer cells at the maternal-fetal interface.

KRT8 PECAM1

6.35e-051138215499555
Pubmed

Murine Jagged1/Notch signaling in the second heart field orchestrates Fgf8 expression and tissue-tissue interactions during outflow tract development.

SEMA3C PECAM1

6.35e-051138219509466
Pubmed

Delta-like ligand 4-mediated Notch signaling controls proliferation of second heart field progenitor cells by regulating Fgf8 expression.

SEMA3C PECAM1

6.35e-051138232778568
Pubmed

Meis1 is required for the maintenance of postnatal thymic epithelial cells.

KRT8 PECAM1

6.35e-051138224594519
Pubmed

Type 1 and 3 inositol trisphosphate receptors are required for extra-embryonic vascular development.

KRT8 PECAM1

6.35e-051138227514653
Pubmed

Pdgfrα functions in endothelial-derived cells to regulate neural crest cells and the development of the great arteries.

SEMA3C PECAM1

6.35e-051138228714851
Pubmed

Mesenchymal cell replacement corrects thymic hypoplasia in murine models of 22q11.2 deletion syndrome.

KRT8 PECAM1

6.35e-051138236136514
Pubmed

Effects of varying Notch1 signal strength on embryogenesis and vasculogenesis in compound mutant heterozygotes.

HES1 PECAM1

6.35e-051138220346184
Pubmed

Co-expression of Tbx6 and Sox2 identifies a novel transient neuromesoderm progenitor cell state.

TWIST2 PECAM1

6.35e-051138229084802
Pubmed

Pias1 is essential for erythroid and vascular development in the mouse embryo.

SEMA3A PECAM1

6.35e-051138227155222
Pubmed

Nemo-like kinase regulates the expression of vascular endothelial growth factor (VEGF) in alveolar epithelial cells.

NLK PECAM1

6.35e-051138227035511
Pubmed

mSEL-1L deficiency affects vasculogenesis and neural stem cell lineage commitment.

HES1 PECAM1

6.35e-051138228816361
Pubmed

Impaired angiogenesis and altered Notch signaling in mice overexpressing endothelial Egfl7.

HES1 PECAM1

7.62e-051238220947685
Pubmed

Functional loss of semaphorin 3C and/or semaphorin 3D and their epistatic interaction with ret are critical to Hirschsprung disease liability.

SEMA3A SEMA3C

7.62e-051238225839327
Pubmed

Perivascular cells support folliculogenesis in the developing ovary.

HES1 PECAM1

7.62e-051238236194632
Pubmed

Semaphorin 3F is a bifunctional guidance cue for dopaminergic axons and controls their fasciculation, channeling, rostral growth, and intracortical targeting.

SEMA3A SEMA3C

7.62e-051238219812329
Pubmed

Semaphorin 3A contributes to distal pulmonary epithelial cell differentiation and lung morphogenesis.

SEMA3A PECAM1

7.62e-051238222096573
Pubmed

Deletion of Sema3a or plexinA1/plexinA3 causes defects in sensory afferent projections of statoacoustic ganglion neurons.

SEMA3A SEMA3C

7.62e-051238223991118
Pubmed

Impaired pancreatic development in Hif2-alpha deficient mice.

HES1 PECAM1

7.62e-051238220678473
Pubmed

Molecular dissection of laminin alpha 5 in vivo reveals separable domain-specific roles in embryonic development and kidney function.

KRT8 PECAM1

7.62e-051238216750824
Pubmed

Defining the molecular pathologies in cloaca malformation: similarities between mouse and human.

KRT8 PECAM1

7.62e-051238224524909
Pubmed

Desmoglein 2 regulates cardiogenesis by restricting hematopoiesis in the developing murine heart.

KRT8 PECAM1

9.00e-051338234737300
Pubmed

Creld1 regulates myocardial development and function.

HES1 PECAM1

9.00e-051338233773996
Pubmed

Peripheral nerve-derived CXCL12 and VEGF-A regulate the patterning of arterial vessel branching in developing limb skin.

SEMA3A PECAM1

9.00e-051338223395391
Pubmed

Neural crest-derived SEMA3C activates endothelial NRP1 for cardiac outflow tract septation.

SEMA3C PECAM1

9.00e-051338226053665
Pubmed

Ontogeny of thymic cortical epithelial cells expressing the thymoproteasome subunit β5t.

KRT8 PECAM1

9.00e-051338221469133
Pubmed

Overexpression of lunatic fringe does not affect epithelial cell differentiation in the developing mouse lung.

HES1 PECAM1

9.00e-051338215591414
Pubmed

Prdm1 functions in the mesoderm of the second heart field, where it interacts genetically with Tbx1, during outflow tract morphogenesis in the mouse embryo.

SEMA3C PECAM1

9.00e-051338224821700
Pubmed

Induction of hematopoietic and endothelial cell program orchestrated by ETS transcription factor ER71/ETV2.

ETV6 PECAM1

9.00e-051338225802403
Pubmed

JAGGED1/NOTCH3 activation promotes aortic hypermuscularization and stenosis in elastin deficiency.

HES1 PECAM1

9.00e-051338234990407
Pubmed

Carbohydrate-binding protein CLEC14A regulates VEGFR-2- and VEGFR-3-dependent signals during angiogenesis and lymphangiogenesis.

HES1 PECAM1

9.00e-051338227991863
Pubmed

Transcription factor TFCP2L1 patterns cells in the mouse kidney collecting ducts.

HES1 KRT8

9.00e-051338228577314
Pubmed

Semaphorin3A, Neuropilin-1, and PlexinA1 are required for lymphatic valve formation.

SEMA3A PECAM1

9.00e-051338222723296
Pubmed

Placental vasculogenesis is regulated by keratin-mediated hyperoxia in murine decidual tissues.

KRT8 PECAM1

1.05e-041438221435445
Pubmed

Impaired embryonic haematopoiesis yet normal arterial development in the absence of the Notch ligand Jagged1.

HES1 PECAM1

1.05e-041438218528438
Pubmed

Sema3F (Semaphorin 3F) Selectively Drives an Extraembryonic Proangiogenic Program.

SEMA3A KRT8

1.05e-041438228729362
Pubmed

The extracellular domain of Notch2 increases its cell-surface abundance and ligand responsiveness during kidney development.

KRT8 PECAM1

1.05e-041438223806616
Pubmed

Creb1 regulates late stage mammalian lung development via respiratory epithelial and mesenchymal-independent mechanisms.

TWIST2 PECAM1

1.05e-041438227150575
CytobandEnsembl 112 genes in cytogenetic band chr15q21

DMXL2 SPPL2A ZNF280D RFX7

1.42e-05177384chr15q21
CytobandEnsembl 112 genes in cytogenetic band chr17q23

CD79B MILR1 PECAM1

1.37e-04120383chr17q23
Cytoband15q21.2

DMXL2 SPPL2A

2.67e-042938215q21.2
Cytoband17q23.3

MILR1 PECAM1

2.86e-043038217q23.3
Cytoband15q21.3

ZNF280D RFX7

3.90e-043538215q21.3
CytobandEnsembl 112 genes in cytogenetic band chr2p24

NBAS GEN1

2.07e-0381382chr2p24
CytobandEnsembl 112 genes in cytogenetic band chr7q21

SEMA3A SEMA3C

9.59e-03178382chr7q21
GeneFamilyImmunoglobulin like domain containing|Semaphorins

SEMA3A SEMA3C

3.43e-0420252736
GeneFamilyImmunoglobulin like domain containing

SEMA3A MILR1 PECAM1

2.32e-03193253594
GeneFamilyBasic helix-loop-helix proteins

TWIST2 HES1

1.00e-02110252420
CoexpressionGSE21380_NON_TFH_VS_GERMINAL_CENTER_TFH_CD4_TCELL_DN

TASP1 SPPL2A ZNF280D RFX7 GEN1 PECAM1

4.12e-07200386M7505
CoexpressionAtlasdev gonad_e11.5_M_GonMes_Sma_top-relative-expression-ranked_500

SEMA3A HES1 KRT8 SEMA3C RNF19A KIAA1217 RNF19B

8.35e-06432377gudmap_dev gonad_e11.5_M_GonMes_Sma_500
CoexpressionAtlasalpha beta T cells, T.4Mem.LN, TCRb CD44high CD122lo CD4, Lymph Node, avg-3

TASP1 MS4A6A RNF19A NLK PECAM1 SCML4

2.81e-05348376GSM538362_500
CoexpressionAtlasdev gonad_e11.5_F_GonMes_Sma_k-means-cluster#2_top-relative-expression-ranked_1000

KRT8 RNF19A KIAA1217 RNF19B

6.71e-05126374gudmap_dev gonad_e11.5_F_GonMes_Sma_k2_1000
CoexpressionAtlasdev gonad_e11.5_M_GonMes_Sma_top-relative-expression-ranked_1000

SEMA3A ETV6 HES1 KRT8 SEMA3C RNF19A KIAA1217 RNF19B

8.69e-05849378gudmap_dev gonad_e11.5_M_GonMes_Sma_1000
CoexpressionAtlasdev gonad_e11.5_F_GonMes_Sma_top-relative-expression-ranked_1000

SEMA3A ETV6 HES1 KRT8 SEMA3C RNF19A KIAA1217 RNF19B

9.36e-05858378gudmap_dev gonad_e11.5_F_GonMes_Sma_1000
CoexpressionAtlasdev gonad_e11.5_F_GonMes_Sma_top-relative-expression-ranked_500

SEMA3A HES1 KRT8 SEMA3C RNF19A RNF19B

9.81e-05436376gudmap_dev gonad_e11.5_F_GonMes_Sma_500
CoexpressionAtlasalpha beta T cells, T.4Nve.PP, TCR+ CD4+ CD44low CD62Lhigh, Peyer's Patch, avg-2

MS4A6A RNF19A NLK PECAM1 SCML4

2.44e-04327375GSM538380_500
CoexpressionAtlasalpha beta T cells, T.4.Pa.BDC, 4+ 8- BDC+, Pancreas, avg-2

MS4A6A RNF19A NLK PECAM1 SCML4

2.48e-04328375GSM605756_500
CoexpressionAtlasalpha beta T cells, T.4Nve.LN, 4+ 8- 25- 62Lhi 44lo, Lymph Node, avg-3

TASP1 MS4A6A NLK PECAM1 SCML4

2.77e-04336375GSM538374_500
CoexpressionAtlasalpha beta T cells, T.4.PLN.BDC, 4+ 8- BDC+, Lymph Node, avg-3

MS4A6A RNF19A NLK PECAM1 SCML4

2.77e-04336375GSM605758_500
CoexpressionAtlasdev gonad_e11.5_F_GonMes_Sma_top-relative-expression-ranked_200

SEMA3A HES1 SEMA3C RNF19B

2.82e-04183374gudmap_dev gonad_e11.5_F_GonMes_Sma_200
CoexpressionAtlasalpha beta T cells, T.4.TI.B16, 4+ 8- TCR+ 45+, B16 Melanoma Tumor, avg-3

TASP1 MS4A6A NLK PECAM1 SCML4

2.85e-04338375GSM605763_500
CoexpressionAtlasCD positive, CD4 Test DB, 4+8-B220-, Spleen, avg-1

TASP1 MS4A6A NLK PECAM1 SCML4

2.85e-04338375GSM403987_500
CoexpressionAtlasalpha beta T cells, T.8SP24int.Th, 4- 8+ TCRhi 24int, Thymus, avg-3

MS4A6A RNF19A GEN1 NLK SCML4

2.89e-04339375GSM399382_500
CoexpressionAtlasDevelopingKidney_e15.5_cortic collect duct_emap-28132_top-relative-expression-ranked_1000

UBR3 KRT8 SEMA3C ST3GAL6 RNF19A KIAA1217 TMEM51

3.29e-04774377gudmap_developingKidney_e15.5_cortic collect duct_1000
CoexpressionAtlasDevelopingKidney_e15.5_early proxim tubul_emap-28005_k-means-cluster#2_top-relative-expression-ranked_1000

KRT8 SEMA3C TMEM51

3.52e-0479373gudmap_developingKidney_e15.5_early proxim tubul_1000_k2
CoexpressionAtlasCD positive, CD4 Test NA, 4+8-B220-, Spleen, avg-1

TASP1 MS4A6A NLK PECAM1 SCML4

3.66e-04357375GSM403986_500
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_2500_k-means-cluster#4

HIPK3 LYPLA1 ZNF280D ST3GAL6 PECAM1

3.75e-04359375Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_2500_K4
CoexpressionAtlasalpha beta T cells, T.4Mem44h62l.Sp, CD4 TCRb CD44hi CD62Llo, Spleen, avg-3

TASP1 MS4A6A RNF19A NLK SCML4

3.75e-04359375GSM538371_500
CoexpressionAtlasdev gonad_e12.5_M_InterstitTestis_Sma_top-relative-expression-ranked_1000

SEMA3A HES1 KRT8 SEMA3C RNF19A GEN1 KIAA1217

3.81e-04793377gudmap_dev gonad_e12.5_M_InterstitTestis_Sma_1000
CoexpressionAtlasCD positive, CD4 Control, 4+ 8- B220-, Spleen, avg-4

TASP1 MS4A6A NLK SCML4

4.75e-04210374GSM403995_500
CoexpressionAtlaskidney_e10.5_UretericTip_HoxB7_top-relative-expression-ranked_500

SEMA3A KRT8 SEMA3C GEN1 KCNH5

5.10e-04384375gudmap_kidney_e10.5_UretericTip_HoxB7_500
CoexpressionAtlasgamma delta T cells, Tgd.vg2+.Sp, TCRd+ Vg2+ CD44-, Spleen, avg-3

CD79B MS4A6A NLK PECAM1 SCML4

5.22e-04386375GSM605787_500
CoexpressionAtlaskidney_e15.5_Podocyte_MafB_k-means-cluster#3_top-relative-expression-ranked_200

SEMA3A SEMA3C

5.50e-0420372gudmap_kidney_e15.5_Podocyte_MafB_k3_200
ToppCellPBMC-Control-Myeloid-Classical_Monocyte-Classical_Monocyte-cMono_4|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

HES1 DMXL2 MS4A6A TMEM51 PECAM1 RNF19B

1.16e-08192376f14ee74ac3275601749a23c5efe39c2413a62e1a
ToppCellPBMC-Control-Myeloid-Classical_Monocyte-Classical_Monocyte-cMono_4|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HES1 DMXL2 MS4A6A TMEM51 PECAM1 RNF19B

1.16e-081923760219093e7921a0db78053aee13ec480b520f5662
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT2_L6_FEZF2-Exc_L6_FEZF2_KRT17|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A SEMA3C KIAA1217 KCNH5 SCML4

2.87e-0717037584d49a1f2989d98bd0acf9ec2d59f1042fc0f55b
ToppCellLPS-antiTNF-Lymphocytic_B|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B GEN1 MILR1 SCML4

3.22e-07174375cc493654ea3517bc6a145c7f787f304929636f86
ToppCellLPS-antiTNF-Lymphocytic_B-B_cells-B-cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B GEN1 MILR1 SCML4

3.22e-071743759eb3504f9340517ef5d056503044fbdb9ffeb714
ToppCellLPS-antiTNF-Lymphocytic_B-B_cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B GEN1 MILR1 SCML4

3.22e-07174375b4c2d1c029fcd0d4926aa79a5b789c713919dcf3
ToppCellmild_COVID-19_(asymptomatic)-Classical_Monocyte|World / disease group, cell group and cell class (v2)

DMXL2 MS4A6A TMEM51 PECAM1 RNF19B

6.25e-07199375727122b6f4ca265d2826c9271b10a4215a9d45a3
ToppCellBronchial-NucSeq-Endothelial-Endothelia_vascular-VE_alveolar_capillary_Car4_aerocyte|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SEMA3A HES1 KIAA1217 TMEM51 PECAM1

6.41e-07200375105c67e4f5eff036013d655c8e8ac577d32dae2e
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Myeloid-Macrophage-macrophage,_alveolar-Macro_c2-CCL3L1|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

DMXL2 MS4A6A TMEM51 RNF19B

8.62e-06157374a98d06cef80bfe8481b0940abce2b29675e45812
ToppCellfacs-Marrow-Granulocytes-24m-Lymphocytic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CD79B KRT8 ST3GAL6 TMEM51

9.06e-06159374f0611a7bf15e2f7dfe828dd247650a30b3d6d44d
ToppCelldroplet-Lung-nan-18m-Lymphocytic-plasma_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UBR3 NBAS CD79B GEN1

9.99e-061633745efecdd8a069a822bc9d35b407092925a865e629
ToppCellfacs-Marrow-Granulocytes-24m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CD79B KRT8 ST3GAL6 TMEM51

9.99e-06163374e04de78a52cc886623689a913f7852200a77605b
ToppCellfacs-Marrow-Granulocytes-24m-Lymphocytic-naive_B_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CD79B KRT8 ST3GAL6 TMEM51

9.99e-061633748509b87748ec460992ae6cedbb155e1c6f6e2e48
ToppCelldroplet-Lung-nan-18m-Lymphocytic-Plasma_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

UBR3 NBAS CD79B GEN1

9.99e-061633740d94a427f86e62aba12c397c6d7b8cd297f3a0e5
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT2_L6_FEZF2-Exc_L6_FEZF2_KRT17|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A SEMA3C KIAA1217 SCML4

1.05e-05165374fee7f2f8d0e25c0d067adc73f8913721bd709a3e
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Myeloid-Macrophage-macrophage,_alveolar|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

DMXL2 MS4A6A TMEM51 RNF19B

1.07e-0516637428a44448a0b0d72459e8fe84ce5d666f16f514b3
ToppCellPBMC_fresh-frozen-Mild-Moderate_convalescent_d36-51-Myeloid-Macrophage|Mild-Moderate_convalescent_d36-51 / Compartment, severity and other cell annotations on 10x 3' data (130k)

DMXL2 MS4A6A TMEM51 RNF19B

1.07e-051663742a04915d534a83e65aa168435d6856125b5bdd78
ToppCellP28|World / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

HES1 SEMA3C ST3GAL6 PECAM1

1.13e-051683744ee59a6147bbe7e4a03cc2d6fe9d6c10b18a3a06
ToppCellLPS-IL1RA-Lymphocytic_B-B_cells-B-cells|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B MILR1 SCML4

1.18e-0517037492e0873f618b2fa60c4d555b10f234d5cbcf3325
ToppCellLPS-IL1RA-Lymphocytic_B-B_cells|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B MILR1 SCML4

1.18e-05170374c181991f933b779f99afc3782f292306f209e2ac
ToppCellLPS-IL1RA-Lymphocytic_B|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B MILR1 SCML4

1.18e-0517037456284fbfd1e53f67c8c0b7fba64505a4002adba2
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT2_L6_FEZF2|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A SEMA3C KIAA1217 SCML4

1.23e-05172374cecfe5cf20f317ea01b4604789e07a14481c4cd6
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A SEMA3C KIAA1217 KCNH5

1.29e-05174374e4d65fe121a32ac4cdd6312e7b8f867f0852e991
ToppCellLPS_only-Lymphocytic_B-B_cells|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B MILR1 SCML4

1.38e-05177374c82332c5f656aa26513e4f7525d5d4d733019725
ToppCellLPS_only-Lymphocytic_B|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B MILR1 SCML4

1.38e-051773745ed65e08d773d157840317c72e0d43c261d438d4
ToppCellLPS_only-Lymphocytic_B-B_cells-B-cells|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SEMA3A CD79B MILR1 SCML4

1.38e-051773748a955a7ab84c434f9ad4b467246b8be3cb479406
ToppCellT_cells-TFH-like_cells|T_cells / Immune cells in Kidney/Urine in Lupus Nephritis

ETV6 MS4A6A RNF19A KIAA1217

1.41e-05178374e2ae43e5ec31de6197f2cbd6089f944adbf0a163
ToppCelldroplet-Lung-nan|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CD79B SEMA3C ST3GAL6 PECAM1

1.44e-05179374006f2b6887b0f1f26e58bb11c919468b62bf4d62
ToppCell10x5'-lymph-node_spleen-Myeloid_Mac-Intestinal_macrophages|lymph-node_spleen / Manually curated celltypes from each tissue

DMXL2 MS4A6A KIAA1217 TMEM51

1.48e-051803747be7d7a6906fff6dbdecd9cb013d855aba4eda2a
ToppCellpdx-Tumor_cells-T6|Tumor_cells / Sample and Cell Type and Tumor Cluster (all cells)

SEMA3A ETV6 SEMA3C RNF19A

1.54e-051823747b24a4f712e1ae1525e8f1c8ec4e1fc43489cbee
ToppCelldroplet-Lung-21m|Lung / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

CD79B SEMA3C ST3GAL6 PECAM1

1.64e-051853749c907298166e3dd65b1d1e7673a1b8d01b492bd0
ToppCelldroplet-Lung-nan-21m|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CD79B SEMA3C ST3GAL6 PECAM1

1.64e-0518537443b7345a61e31099718c9cecf194b4e9884b904b
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Myeloid-Monocytic-Nonclassical_Monocyte-Mono_c5-CD16|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)

ST3GAL6 MS4A6A MILR1 TMEM51

1.71e-051873745917bdfe84cf5941e21b415aebbab3090cc5d576
ToppCellPND07-Endothelial-Endothelial_blood-vessel-Microvascular_EC-CAP1|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.82e-051903746847afca73e1b76c2e86187ccb1a164aefd8f17b
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Myeloid-Monocytic-Classical_Monocyte-Mono_c2-CD14-HLA-DPB1|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

HES1 DMXL2 ST3GAL6 MS4A6A

1.82e-051903744b9bac17eb7ceadada932f2d4a20a5f176088d53
ToppCellPND07-Endothelial-Endothelial_blood-vessel-Microvascular_EC-CAP1-CAP1_mature|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.82e-051903742245f61ae0a720db21e29fcd4e910cf590d2655d
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-3m-Endothelial-Endothelial_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HES1 SEMA3C ST3GAL6 PECAM1

1.94e-05193374e4b440d50ae7391b26924778be6d9d53e0692449
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-3m-Endothelial|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HES1 SEMA3C ST3GAL6 PECAM1

1.94e-05193374e523dc5751f6fdcd4fc1a62b1eecd43f6ae79da9
ToppCellfacs-Brain_Non-Myeloid-Hippocampus-3m-Endothelial-endothelial_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

HES1 SEMA3C ST3GAL6 PECAM1

1.94e-051933741772f2ac217727de63c4a9303881b3a19a6bb0f0
ToppCellPND14-Endothelial|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.98e-05194374cee89d4340738f09d07a159cd6aeee4300776988
ToppCellPND14-Endothelial-Endothelial_blood-vessel|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.98e-0519437432962060d80f3edffbe9f0ecad3000c3a9817865
ToppCellPND07-Endothelial-Endothelial_blood-vessel|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.98e-0519437412496bc964d1c572241410524a89ca1a9fdb7e34
ToppCellPND07-Endothelial-Endothelial_blood-vessel-Microvascular_EC|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.98e-0519437446e36817fd1ed27af8013375214c38c9a9271640
ToppCellCOPD-Endothelial-VE_Peribronchial|Endothelial / Disease state, Lineage and Cell class

HIPK3 LYPLA1 CD79B NLK

1.98e-051943748dcde77767b23e75360adb316cdccf56a00e3726
ToppCellPND07-Endothelial|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.98e-05194374d1080c86884916c22894b27994141463f5919812
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

HES1 SEMA3C ST3GAL6 PECAM1

1.98e-05194374c6cee7d15af76f9a60d7f414ef0bcc1735c47b7a
ToppCellMonocytes-M2-like_CD16+_macrophages|World / Immune cells in Kidney/Urine in Lupus Nephritis

ST3GAL6 MS4A6A MILR1 TMEM51

2.02e-0519537410fa47bdcf6c9784ea930b75a5861e139421feed
ToppCellMonocytes|World / Immune cells in Rheumatoid Arthritis Joint Synovial Tissues

DMXL2 ST3GAL6 MS4A6A TMEM51

2.06e-05196374ab0a8f5f388c9794d7f41f99fb0a5f2fd6fff6b3
ToppCell10x5'-GI_small-bowel-Myeloid_Mac-Intestinal_macrophages|GI_small-bowel / Manually curated celltypes from each tissue

HES1 DMXL2 MS4A6A TMEM51

2.06e-05196374075e5746fa5cb121115a1d51b823c0fbf8d54305
ToppCellCOVID-19-Myeloid-Monocytes|COVID-19 / group, cell type (main and fine annotations)

ETV6 DMXL2 MS4A6A PECAM1

2.06e-0519637404d710267658ea5601ae2cfb4ed5acb8a29bd8a1
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22-Myeloid-Monocytic-Classical_Monocyte-Mono_c2-CD14-HLA-DPB1|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)

SEMA3C DMXL2 MS4A6A PECAM1

2.06e-051963745bcb57c57d5da0440220a1133a96aa89407bd871
ToppCellnucseq-Endothelial|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

SEMA3A HES1 KIAA1217 PECAM1

2.10e-05197374ebf9be068eaa658493fa7884fd19f34642922acb
ToppCell5'-Airway_Nasal-Epithelial-Epithelial_transtional-secretory-nasal_mucosa_goblet_cell-Goblet_(nasal)-Goblet_(nasal)_L.0.2.2.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

ADH7 KRT8 SEMA3C KIAA1217

2.10e-051973745c4cee914baf7cb43e9cb99cc9e3ae823856dc15
ToppCellPBMC-Severe-Myeloid-Classical_Monocyte-Classical_Monocyte-cMono_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

HES1 DMXL2 MS4A6A RNF19B

2.10e-05197374383d598ce3f8f5fc98bef3300e4cf7b6992aec9c
ToppCellPBMC-Severe-Myeloid-Classical_Monocyte-Classical_Monocyte-cMono_4|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

HES1 DMXL2 MS4A6A RNF19B

2.10e-051973743cc4e56a77f96a43f9b5a24cf1b9524c927ef795
ToppCell3'-Broncho-tracheal-Epithelial-Airway_epithelium-respiratory_basal_cell-Suprabasal-Suprabasal_L.0.0.1.2|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

SEMA3A ADH7 HES1 KRT8

2.14e-051983749718f4c013c347f1b3c785ae232dd2fb6c1fe298
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Myeloid-Monocytic-Classical_Monocyte-Mono_c2-CD14-HLA-DPB1|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)

DMXL2 MS4A6A TMEM51 RNF19B

2.14e-05198374c26c909e95225440abdf558b1b858ffc06177000
ToppCellNS-critical-d_07-13|critical / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

ADH7 KRT8 SEMA3C KIAA1217

2.14e-05198374a6e11c87b31beffb6af190c64b4ef3ee1d9dab8d
ToppCellMonocytes|World / Immune cells in Kidney/Urine in Lupus Nephritis

DMXL2 ST3GAL6 MS4A6A TMEM51

2.14e-051983748beccf03c9ec9cd02a96107a9d7ca9a6764c6a61
ToppCellParenchymal-10x5prime-Immune_Myeloid-Macrophage_other-Macro_interstitial|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

ETV6 DMXL2 MS4A6A RNF19B

2.14e-051983741259a6c14c85a406b7f4e9918ae148ee92b99f30
ToppCellBronchial-NucSeq-Endothelial|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SEMA3A HES1 KIAA1217 PECAM1

2.19e-0519937436a230b80096455df26c2e2c8c05fd6b231508c5
ToppCell3'_v3-GI_small-bowel-Myeloid_Mac|GI_small-bowel / Manually curated celltypes from each tissue

HES1 DMXL2 MS4A6A TMEM51

2.19e-051993748990a3d69e24cb3aaba9d6def3d0be9ee973436d
ToppCell3'_v3-GI_small-bowel-Myeloid_Mac-Intestinal_macrophages|GI_small-bowel / Manually curated celltypes from each tissue

HES1 DMXL2 MS4A6A TMEM51

2.19e-0519937496070b5ffcbab4952970f43b536969ddd2ca5d14
ToppCellTracheal-NucSeq-Immune_Myeloid-Monocytic-Monocyte_CD14|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MS4A6A MILR1 TMEM51 PECAM1

2.19e-051993741413156b7be5373fd02bbe39ec50ccfe165fa6d1
ToppCellTracheal-NucSeq|Tracheal / Cell types per location group and 10X technology with lineage, and cell group designations

ETV6 UBR3 NBAS RFX7

2.19e-0519937494b94b17ca18b8dc27b91da1f2ccf89e03cc7035
ToppCellmild_COVID-19_(asymptomatic)-Classical_Monocyte|mild_COVID-19_(asymptomatic) / disease group, cell group and cell class (v2)

DMXL2 MS4A6A PECAM1 RNF19B

2.19e-0519937473a98d19871ffbc3c631de330998d42e9afa6da2
ToppCellTracheal-NucSeq-Immune_Myeloid-Macrophage_other-Macro_CHIT1|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MS4A6A MILR1 TMEM51 PECAM1

2.19e-051993746ce7612ee2ae211eb0f73391e96089ad5431c537
ToppCellParenchymal-10x3prime_v2-Endothelial-Endothelia_vascular-VE_alveolar_capillary_Car4_aerocyte|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

SEMA3A HES1 TMEM51 PECAM1

2.23e-052003743653002c805c314043e2a7b0c9980dfe952dc53e
ToppCellNS-moderate-d_0-4-Epithelial|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

TSGA10 ADH7 KRT8 KIAA1217

2.23e-0520037464462a18afca3c1a8548a857924b8166058bf958
ToppCellNeuronal-Excitatory-eC(RORB)-eC_1-TWIST2-|Neuronal / cells hierarchy compared to all cells using T-Statistic

SEMA3A TWIST2 HES1 KCNH5

2.23e-05200374af5d4a3d735f38c6e07b5d7bd2965b0486632c4e
ToppCellBronchial-NucSeq-Immune_Myeloid-Macrophage_alveolar|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SEMA3C DMXL2 TMEM51 PECAM1

2.23e-05200374a443e475e7a10c26a6173d1af961de6219e0e567
ToppCellNeuronal-Excitatory-eC(RORB)-eC_1-TWIST2|Neuronal / cells hierarchy compared to all cells using T-Statistic

SEMA3A TWIST2 HES1 KCNH5

2.23e-05200374bbfbefd24cc070b010e787e08ff6bff4a7ee3f7c
ToppCellBronchial-NucSeq-Immune_Myeloid|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DMXL2 MS4A6A TMEM51 PECAM1

2.23e-052003742f5b71e55c2de0e77fdae6667eb57f333acc6cd1
ToppCellBronchial-NucSeq-Immune_Myeloid-Macrophage_alveolar-Macro_alveolar|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SEMA3C DMXL2 TMEM51 PECAM1

2.23e-05200374ed785a6d08ca2b350dc3307b587eadfb2886d1f9
ToppCellNeuronal-Excitatory-eC(RORB)-eC_1-TWIST2--L3-5|Neuronal / cells hierarchy compared to all cells using T-Statistic

SEMA3A TWIST2 HES1 KCNH5

2.23e-05200374b9ef0e11c8e22f2c9c926fd48fa2005ef8d22752
ToppCellE18.5-samps-Epithelial-Alveolar_epithelial-AT1_-_meso|E18.5-samps / Age Group, Lineage, Cell class and subclass

SEMA3A PPP1R37 KRT8

2.21e-0414237377fd145c1c500d580f70ac4e54c3fd879ecf0ab3
ToppCellSmart-seq2-lymph_node_(Smart-seq2)-myeloid-myeloid_dendritic-CD141-positive_myeloid_dendritic_cell|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

ST3GAL6 MS4A6A TMEM51

2.30e-04144373a9305d2499189f23b942775285be9fb260ce4214
ToppCellTCGA-Bladder-Primary_Tumor-Urothelial_Carcinoma-Papillary_Muscle_Invasive_Urothelial_Carcinoma-8|TCGA-Bladder / Sample_Type by Project: Shred V9

TSGA10 PPP1R37 TMEM51

2.55e-0414937389705865e94360c1288ee98c5a6b381f3c6242b3
ToppCellSmart-seq2-lymph_node_(Smart-seq2)-myeloid-myeloid_dendritic|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

ST3GAL6 MS4A6A TMEM51

2.60e-04150373f4aed24b79e1be38abc7a1120256821601893d6d
ToppCellnormal_Lymph_Node-Myeloid_cells-mo-Mac|Myeloid_cells / Location, Cell class and cell subclass

HES1 DMXL2 MS4A6A

2.75e-041533735424494ea1f09542799045a875cc3eac13de5079
ToppCellCOVID-19-kidney-Epithelial_(EC)|kidney / Disease (COVID-19 only), tissue and cell type

SEMA3A CACNA1C PECAM1

3.14e-041603730d4880f85565d8c540c94a8f8109147b3029279a
ToppCellnucseq-Epithelial-Epithelial_Airway-Basal/Suprabasal-Suprabasal|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

SEMA3A ADH7 HES1

3.25e-04162373112fa4de685727f6c8bf6fc4afb82de0524070ad
ToppCell10x5'-bone_marrow-Lymphocytic_B-ABC_aged-B_naive|bone_marrow / Manually curated celltypes from each tissue

TWIST2 HES1 KIAA1217

3.25e-0416237344832055b11a789e320c802aadb345e065defc8f
ToppCelldroplet-Lung-18m-Hematologic-lymphocytic-plasma_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

UBR3 NBAS GEN1

3.37e-04164373b92e7c91910d518627376166c6ea9ed333b3d07e
ToppCelldroplet-Lung-18m-Hematologic-lymphocytic-plasma_cell-plasma_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

UBR3 NBAS GEN1

3.37e-04164373a1e43c6b3e2553f5604100db6e92bf244b70c36d
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_intercalated_cell-Intercalated_Cell_Type_B|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

SEMA3C TMEM51 KCNH5

3.43e-04165373dc570154baed59ed109e5369589448e075ba66a9
ToppCellLV-13._Vascular_Smooth_Muscle|World / Chamber and Cluster_Paper

CACNA1C ETV6 TMEM51

3.43e-04165373f37fd95adc95d7753cf6e55ae819976513c7ec77
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT2_L6_FEZF2-Exc_L6_FEZF2_KRT17|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A SEMA3C KIAA1217

3.49e-04166373739dfbe927f409821ff23aca6e47ebe78f57e859
ToppCellfacs-Lung-EPCAM-24m-Myeloid-Plasmacytoid_Dendritic|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GEN1 MILR1 SCML4

3.56e-04167373e0f2509e86302eca8352821bce12597f6c51fc24
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT2_L6_FEZF2|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A SEMA3C KIAA1217

3.56e-04167373a6ff7a3d9b80839c0efa91658836812e868561fa
ToppCellfacs-Lung-EPCAM-24m-Myeloid-plasmacytoid_dendritic_cell|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GEN1 MILR1 SCML4

3.56e-04167373b25646b6653cd8814dbeae4c74ce899ede105200
ToppCelldroplet-Lung-30m-Hematologic-myeloid-non-classical_monocyte-nonclassical_monocyte_l4|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

HES1 TMEM51 RNF19B

3.62e-04168373d823979335ac6b5d1f062ebb741c759d2f919dbf
ToppCellLPS-IL1RA+antiTNF-Lymphocytic_B-B_cells-B-cells|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CD79B MILR1 SCML4

3.62e-04168373eeb381b62c7ba263af96de1194ed59e57b6ca3ae
ToppCellLPS-IL1RA+antiTNF-Lymphocytic_B-B_cells|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CD79B MILR1 SCML4

3.62e-04168373063d0368d656962b335154c230bdcd9236e7c9ad
ToppCellSigmoid-Macrophage-Macrophage|Macrophage / Region, Cell class and subclass

HES1 ST3GAL6 TMEM51

3.62e-04168373bb16e135b6ae0d66615420b61edd6f62f2a3233c
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)-Glut_CT2_L6_FEZF2|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A SEMA3C KIAA1217

3.62e-04168373217770a94ace446cdfc7687b459dece707576e76
ToppCellFetal_29-31_weeks-Epithelial-basal_cell-D150|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

ADH7 HES1 KIAA1217

3.62e-041683736521bead9789d626b86cbd08692c621c5a5aef33
ToppCellLPS-IL1RA+antiTNF-Lymphocytic_B|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CD79B MILR1 SCML4

3.62e-04168373a7c4251d8a83bc30196a444028a35c17c24dc291
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Glutamatergic_Excit-Glut_A_(CT)|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SEMA3A KIAA1217 KCNH5

3.62e-041683737abaddbcc55e44653d54aa15464266aa6bd5c9d2
ToppCelldroplet-Lung-30m-Hematologic-myeloid-non-classical_monocyte|30m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

HES1 TMEM51 RNF19B

3.62e-04168373f377ff4c066a9857ad14d245e56325ad220e22e1
Diseasefactor XI measurement, fibrinogen measurement, tissue plasminogen activator measurement, factor VII measurement

ADH7 SPPL2A MS4A6A

4.42e-0556363EFO_0004619, EFO_0004623, EFO_0004694, EFO_0004791
Diseasefibrinogen measurement, factor VII measurement

ADH7 SPPL2A MS4A6A

4.91e-0558363EFO_0004619, EFO_0004623
Diseaseglycolipid transfer protein domain-containing protein 2 measurement

ADH7 MS4A6A

5.18e-059362EFO_0801643
DiseaseImmunologic Deficiency Syndromes

CACNA1C NBAS

3.60e-0423362C0021051
DiseaseIschemic stroke, factor VII measurement

ADH7 MS4A6A

5.76e-0429362EFO_0004619, HP_0002140
DiseaseThrombocytopenia

ETV6 PECAM1

5.76e-0429362C0040034
Diseasered blood cell density measurement

CACNA1C ETV6 SEMA3C ZNF217 SPPL2A RFX7

6.27e-04880366EFO_0007978
Diseasevenous thromboembolism, factor VII measurement

ADH7 MS4A6A

9.90e-0438362EFO_0004286, EFO_0004619
Diseasefibrinogen measurement, tissue plasminogen activator measurement

SPPL2A MS4A6A

1.39e-0345362EFO_0004623, EFO_0004791
Diseasefibrinogen measurement, plasminogen activator inhibitor 1 measurement

SPPL2A MS4A6A

1.39e-0345362EFO_0004623, EFO_0004792
Diseaselung adenocarcinoma, family history of lung cancer

TASP1 SEMA3C

1.78e-0351362EFO_0000571, EFO_0006953
Diseaseabdominal fat cell number

ADH7 SPPL2A KIAA1217

1.81e-03198363EFO_0021534
Diseaseepisodic memory

NBAS SEMA3C

1.85e-0352362EFO_0004333
Diseasefactor VII measurement

ADH7 MS4A6A

2.06e-0355362EFO_0004619
Diseaseresponse to carboplatin

MRPL39 NBAS

2.29e-0358362GO_0097328

Protein segments in the cluster

PeptideGeneStartEntry
YNTSCSKAYVNHMMS

ZNF280D

651

Q6N043
TMIDALASCHMNYGT

ADH7

286

P40394
SDCTVMNIAEHYMAS

EIF3B

641

P55884
NIMMYACINATKDSH

DMXL2

561

Q8TDJ6
VKMHCYMNSASGNVS

CD79B

61

P40259
MQNMSIHTKTTSGYA

KRT8

406

P05787
GNHKNRTNMTYEKMS

ETV6

381

P41212
ADVMQKSSTCSFMYG

KCNH5

56

Q8NCM2
YGTMSYSTEMKNNCD

BEND2

401

Q8NDZ0
MMHCQTLKDQPSAYS

TSFM

146

P43897
SVMAMVEHSGNYTCK

PECAM1

291

P16284
KMMAAYNGGTSAAAA

NLK

11

Q9UBE8
KMISCSNHYNSVMPQ

HIPK3

716

Q9H422
DYKAASMHCQELMAT

NBAS

1296

A2RRP1
SMHCQELMATGYPKS

NBAS

1301

A2RRP1
VMKGQNVSMFCSHKN

MILR1

46

Q7Z6M3
QAAAHMMRKTSCLQY

PPP1R37

181

O75864
MGKMHKTCYNQEGIA

CACNA1C

291

Q13936
YIGNSGMSSKMTHDC

MS4A6A

226

Q9H2W1
KTYEGMMHSSCQQEM

LYPLA1

201

O75608
TMNTKDPHVDCYTMS

GEN1

171

Q17RS7
GHLANCMTQINAMTY

HES1

141

Q14469
MNKNISTPYSCAMHL

MRPL39

81

Q9NYK5
SAYIIKMNDGSCNHM

RNF19B

291

Q6ZMZ0
AFSHSEMQMINQYCK

SEMA3C

696

Q99985
SASAYCNPSMQAEMH

KIAA1217

431

Q5T5P2
ATMSLMNKNAYHNVT

ST3GAL6

296

Q9Y274
SSNIFKGSAVCMYSM

SEMA3A

331

Q14563
AYIIKMNDGSCNHMT

RNF19A

306

Q9NV58
KGNSYQMMDHLDCAT

SPPL2A

491

Q8TCT8
MMAQSKANGSHYALT

TMEM51

1

Q9NW97
MSMNNSHSYGNCLGM

RFX7

801

Q2KHR2
SMHNKSATYSVGMQK

RHPN2P1

496

A8MT19
NAYHMSSTMKPNTKC

TSGA10

656

Q9BZW7
AMTYVQSHFCNSMID

UBR3

696

Q6ZT12
HMRTHKDSFTYGCNM

ZNF217

146

O75362
SHTTESMCVGYMSAQ

TASP1

371

Q9H6P5
MKMAVHNLYSASAGS

SCML4

21

Q8N228
MDNKMTSCSYVAHER

TWIST2

126

Q8WVJ9