Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctiontranscription coactivator activity

BCL9L NCOA6 NRBF2 KDM5A KAT6A XPC BCL9 TSC22D1 SMARCA2 SMARCC1 EP300

1.32e-0630311411GO:0003713
GeneOntologyMolecularFunctionhistone H3K4me/H3K4me2/H3K4me3 demethylase activity

KDM5A KDM5C KDM5D

3.58e-0661143GO:0034647
GeneOntologyMolecularFunctionchromatin binding

NCOA6 SATB2 TOX KDM5A KAT6A UPF1 REST DHX30 SF3B1 SMARCA2 SMARCC1 NFAT5 TSPYL4 STAG2 EP300 HDAC2

4.62e-0673911416GO:0003682
GeneOntologyMolecularFunctionhistone H3K4 demethylase activity

KDM5A KDM5C KDM5D

9.94e-0681143GO:0032453
GeneOntologyMolecularFunctiontranscription coregulator activity

BCL9L NCOA6 NRBF2 KDM5A HIPK1 KAT6A XPC BCL9 TSC22D1 SMARCA2 SMARCC1 SUFU EP300

1.95e-0556211413GO:0003712
GeneOntologyMolecularFunctiontranscription factor binding

ATF7 NCOA6 ZBTB16 RARB NRBF2 KDM5C KAT6A XPC REST KDM5D SUFU NFAT5 EP300 HDAC2

9.94e-0575311414GO:0008134
GeneOntologyMolecularFunctionhistone H3 demethylase activity

KDM5A KDM5C KDM5D

5.35e-04281143GO:0141052
GeneOntologyMolecularFunctionRNA polymerase II-specific DNA-binding transcription factor binding

NCOA6 RARB NRBF2 KDM5C XPC REST KDM5D EP300 HDAC2

6.51e-044171149GO:0061629
GeneOntologyMolecularFunctionhistone demethylase activity

KDM5A KDM5C KDM5D

7.25e-04311143GO:0032452
GeneOntologyMolecularFunctionprotein demethylase activity

KDM5A KDM5C KDM5D

7.97e-04321143GO:0140457
GeneOntologyMolecularFunctionkinase binding

ATF7 MYH6 SPDYE17 UBQLN1 SPDYE10 ROR2 CEP192 SPDYE12 SPDYE11 SPDYE15 SPDYE8 SUFU EP300 SPDYE14

1.25e-0396911414GO:0019900
GeneOntologyMolecularFunctionprotein kinase binding

ATF7 MYH6 SPDYE17 SPDYE10 ROR2 CEP192 SPDYE12 SPDYE11 SPDYE15 SPDYE8 SUFU EP300 SPDYE14

1.43e-0387311413GO:0019901
GeneOntologyBiologicalProcesscardiocyte differentiation

SOX6 ATG5 MYH6 RARB REST NEB VWA5A EP300 HDAC2

2.11e-062211069GO:0035051
GeneOntologyBiologicalProcesschromatin organization

ATG5 SATB2 TOX KDM5A KDM5C KAT6A REST KDM5D INO80D EMSY SF3B1 SMARCA2 SMARCC1 NFAT5 TSPYL4 EP300 HDAC2

3.09e-0689610617GO:0006325
GeneOntologyBiologicalProcesscardiac muscle cell differentiation

SOX6 ATG5 MYH6 RARB NEB VWA5A EP300 HDAC2

3.70e-061771068GO:0055007
GeneOntologyBiologicalProcessstem cell population maintenance

BCL9L KAT6A REST BCL9 SMARCA2 SMARCC1 STAG2 PCM1 HDAC2

3.74e-062371069GO:0019827
GeneOntologyBiologicalProcessmaintenance of cell number

BCL9L KAT6A REST BCL9 SMARCA2 SMARCC1 STAG2 PCM1 HDAC2

4.44e-062421069GO:0098727
GeneOntologyBiologicalProcessstriated muscle cell differentiation

SOX6 ATG5 MYH6 RARB ADGRB3 BCL9 NEB NEO1 VWA5A EP300 HDAC2

5.48e-0639110611GO:0051146
GeneOntologyBiologicalProcessheart development

SOX6 ATG5 ATF7 NCOA6 MYH6 RARB IFT57 KAT6A REST NEB VWA5A WIF1 SUFU EP300 HDAC2

7.47e-0675710615GO:0007507
GeneOntologyBiologicalProcessmating behavior

DRD5 NLGN4Y CYP11A1 NLGN4X HDAC2

1.10e-05571065GO:0007617
GeneOntologyBiologicalProcessprotein-DNA complex organization

ATG5 SATB2 TOX KDM5A KDM5C KAT6A REST KDM5D INO80D EMSY SF3B1 SMARCA2 SMARCC1 NFAT5 TSPYL4 EP300 HDAC2

1.29e-0599910617GO:0071824
GeneOntologyBiologicalProcessmuscle cell differentiation

SOX6 ATG5 MYH6 RARB ADGRB3 BCL9 NEB NEO1 VWA5A SMARCA2 EP300 HDAC2

1.83e-0553110612GO:0042692
GeneOntologyBiologicalProcesspositive regulation of transcription by RNA polymerase II

SOX6 ATF7 BCL9L NCOA6 SATB2 ZBTB16 HIVEP2 RARB TOX EBF3 REST BCL9 PRDM4 TSC22D1 SF3B1 SMARCA2 SMARCC1 NFAT5 EP300 HDAC2

2.38e-05139010620GO:0045944
GeneOntologyBiologicalProcesschromatin remodeling

SATB2 KDM5A KDM5C KAT6A REST KDM5D INO80D SF3B1 SMARCA2 SMARCC1 NFAT5 TSPYL4 EP300 HDAC2

2.62e-0574110614GO:0006338
GeneOntologyBiologicalProcessmuscle structure development

SOX6 ATG5 BCL9L MYH6 RARB ADGRB3 REST BCL9 NEB NEO1 VWA5A SMARCA2 SMARCC1 EP300 HDAC2

3.24e-0585810615GO:0061061
GeneOntologyBiologicalProcessreproductive behavior

DRD5 NLGN4Y CYP11A1 NLGN4X HDAC2

3.96e-05741065GO:0019098
GeneOntologyBiologicalProcesscirculatory system development

SOX6 ATG5 COL4A1 ATF7 NCOA6 COL8A1 MYH6 RARB IFT57 HIPK1 KAT6A ADGRB3 REST NEB VWA5A WIF1 SMARCA2 SUFU EP300 HDAC2

4.01e-05144210620GO:0072359
GeneOntologyBiologicalProcessmale mating behavior

NLGN4Y NLGN4X HDAC2

5.74e-05151063GO:0060179
GeneOntologyBiologicalProcessterritorial aggressive behavior

NLGN4Y NLGN4X

7.82e-0531062GO:0002124
GeneOntologyBiologicalProcesspositive regulation of stem cell population maintenance

REST SMARCA2 SMARCC1 HDAC2

1.37e-04511064GO:1902459
GeneOntologyBiologicalProcessmale courtship behavior

NLGN4Y NLGN4X

1.56e-0441062GO:0008049
GeneOntologyBiologicalProcessorganelle assembly

ATG5 MYH6 UBQLN1 IFT57 CEP192 NEB AP3M1 DHX30 TBC1D10B PTPRS RP1L1 PAN2 STAG2 EP300 PCM1 HDAC2

2.25e-04113810616GO:0070925
GeneOntologyBiologicalProcesssarcomere organization

MYH6 NEB EP300 HDAC2

2.41e-04591064GO:0045214
GeneOntologyBiologicalProcesscardiac muscle tissue development

SOX6 ATG5 MYH6 RARB NEB VWA5A EP300 HDAC2

2.87e-043271068GO:0048738
GeneOntologyBiologicalProcessnegative regulation of transcription by RNA polymerase II

SOX6 ATF7 ZNF536 SATB2 ZBTB16 RARB KDM5A HIPK1 KDM5C REST NACC2 SMARCA2 SUFU EP300 HDAC2

3.13e-04105310615GO:0000122
GeneOntologyBiologicalProcesscell fate commitment

SOX6 TOX ROR2 PRDM4 VWA5A SUFU EP300 HDAC2

3.58e-043381068GO:0045165
GeneOntologyBiologicalProcesscentral nervous system development

SOX6 COL4A1 NCOA6 ZBTB16 RARB TOX NLGN4Y ROR2 ELP3 OGDH DHX30 NLGN4X PTPRS SUFU PCM1 HDAC2

3.95e-04119710616GO:0007417
GeneOntologyBiologicalProcesscardiac muscle cell development

ATG5 MYH6 NEB EP300 HDAC2

4.20e-041221065GO:0055013
GeneOntologyBiologicalProcessstriated muscle tissue development

SOX6 ATG5 MYH6 RARB NEB VWA5A EP300 HDAC2

4.43e-043491068GO:0014706
GeneOntologyBiologicalProcessnegative regulation of MHC class II biosynthetic process

MARCHF8 HDAC2

5.40e-0471062GO:0045347
GeneOntologyBiologicalProcesscourtship behavior

NLGN4Y NLGN4X

5.40e-0471062GO:0007619
GeneOntologyBiologicalProcesscardiac cell development

ATG5 MYH6 NEB EP300 HDAC2

6.01e-041321065GO:0055006
GeneOntologyBiologicalProcessmuscle tissue development

SOX6 ATG5 BCL9L MYH6 RARB BCL9 NEB VWA5A EP300 HDAC2

6.03e-0455810610GO:0060537
GeneOntologyBiologicalProcessmyoblast differentiation

BCL9L REST BCL9 SMARCA2 SMARCC1

6.88e-041361065GO:0045445
GeneOntologyBiologicalProcessregulation of stem cell population maintenance

REST SMARCA2 SMARCC1 HDAC2

7.02e-04781064GO:2000036
GeneOntologyBiologicalProcessnegative regulation of miRNA metabolic process

REST EP300 HDAC2

7.03e-04341063GO:2000629
GeneOntologyBiologicalProcessbrainstem development

NLGN4Y NLGN4X

7.18e-0481062GO:0003360
GeneOntologyBiologicalProcessmembraneless organelle assembly

ATG5 MYH6 CEP192 NEB DHX30 PAN2 STAG2 EP300 HDAC2

7.70e-044751069GO:0140694
GeneOntologyCellularComponenttranscription regulator complex

SOX6 ATF7 BCL9L NCOA6 SATB2 ZBTB16 HIVEP2 NRBF2 REST BCL9 ASCC3 NFAT5 EP300 HDAC2

1.51e-0659610414GO:0005667
GeneOntologyCellularComponentchromatin

SOX6 ATF7 SATB2 RARB KDM5A EBF3 KDM5C KAT6A XPC UPF1 REST KDM5D INO80D SF3B1 NACC2 SMARCA2 SMARCC1 NFAT5 TSPYL4 STAG2 EP300 HDAC2

2.97e-06148010422GO:0000785
GeneOntologyCellularComponentSWI/SNF superfamily-type complex

INO80D SF3B1 SMARCA2 SMARCC1 HDAC2

1.18e-04961045GO:0070603
GeneOntologyCellularComponentpostsynaptic density membrane

DRD5 NLGN4Y ADGRB3 NEO1 NLGN4X PTPRS

1.35e-041571046GO:0098839
GeneOntologyCellularComponentsymmetric, GABA-ergic, inhibitory synapse

NLGN4Y NLGN4X

1.46e-0441042GO:0098983
GeneOntologyCellularComponentasymmetric, glutamatergic, excitatory synapse

NLGN4Y ADGRB3 NLGN4X

2.24e-04241043GO:0098985
GeneOntologyCellularComponentATPase complex

INO80D SF3B1 SMARCA2 SMARCC1 HDAC2

4.67e-041291045GO:1904949
GeneOntologyCellularComponentpostsynaptic specialization membrane

DRD5 NLGN4Y ADGRB3 NEO1 NLGN4X PTPRS

5.09e-042011046GO:0099634
GeneOntologyCellularComponentbasement membrane collagen trimer

COL4A1 COL8A1

6.73e-0481042GO:0098651
GeneOntologyCellularComponentnetwork-forming collagen trimer

COL4A1 COL8A1

6.73e-0481042GO:0098642
GeneOntologyCellularComponentcollagen network

COL4A1 COL8A1

6.73e-0481042GO:0098645
GeneOntologyCellularComponentnuclear protein-containing complex

ATF7 BCL9L NCOA6 SATB2 UBQLN4 XPC UPF1 BCL9 PRDM4 INO80D NUP205 SF3B1 SMARCA2 SMARCC1 ASCC3 HDAC2

1.24e-03137710416GO:0140513
GeneOntologyCellularComponentnuclear periphery

SATB2 NUP205 SF3B1 SMARCC1 STAG2

1.65e-031711045GO:0034399
GeneOntologyCellularComponentbeta-catenin-TCF complex

BCL9L BCL9

1.84e-03131042GO:1990907
GeneOntologyCellularComponentsymmetric synapse

NLGN4Y NLGN4X

1.84e-03131042GO:0032280
GeneOntologyCellularComponentnpBAF complex

SMARCA2 SMARCC1

2.15e-03141042GO:0071564
GeneOntologyCellularComponentGBAF complex

SMARCA2 SMARCC1

2.15e-03141042GO:0140288
GeneOntologyCellularComponentbrahma complex

SMARCA2 SMARCC1

2.15e-03141042GO:0035060
GeneOntologyCellularComponentnBAF complex

SMARCA2 SMARCC1

2.81e-03161042GO:0071565
GeneOntologyCellularComponentautophagosome

ATG5 UBQLN1 NRBF2 UBQLN4

2.96e-031191044GO:0005776
HumanPhenoThin upper lip vermilion

SATB2 HIVEP2 EBF3 KDM5C ROR2 KAT6A PACS1 SMARCA2 ASCC3 STAG2 EP300

2.98e-053393911HP:0000219
HumanPhenoThin lips

SATB2 HIVEP2 EBF3 KDM5C ROR2 KAT6A PACS1 SMARCA2 ASCC3 STAG2 EP300

2.98e-053393911HP:0000213
HumanPhenoSmooth philtrum

SATB2 EBF3 KDM5C DHX30 PACS1 SMARCA2 STAG2 EP300

6.08e-05185398HP:0000319
HumanPhenoSandal gap

IFT57 EBF3 ROR2 KAT6A SMARCA2 EP300

7.56e-0596396HP:0001852
DomainLys_sp_deMease-like_dom

KDM5A KDM5C KDM5D

6.68e-0741043IPR013637
DomainPLU-1

KDM5A KDM5C KDM5D

6.68e-0741043PF08429
Domainzf-C5HC2

KDM5A KDM5C KDM5D

1.66e-0651043PF02928
DomainZnf_C5HC2

KDM5A KDM5C KDM5D

1.66e-0651043IPR004198
DomainJmjN

KDM5A KDM5C KDM5D

1.96e-05101043SM00545
DomainJMJN

KDM5A KDM5C KDM5D

1.96e-05101043PS51183
DomainJmjN

KDM5A KDM5C KDM5D

1.96e-05101043PF02375
DomainJmjN

KDM5A KDM5C KDM5D

1.96e-05101043IPR003349
DomainBCL9_beta-catenin-bd_dom

BCL9L BCL9

3.07e-0521042IPR024670
DomainBCL9

BCL9L BCL9

3.07e-0521042PF11502
DomainNLGN4

NLGN4Y NLGN4X

3.07e-0521042IPR030025
DomainBcl-9

BCL9L BCL9

3.07e-0521042IPR015668
Domain-

KDM5A KDM5C KDM5D

7.27e-051510431.10.150.60
DomainBRIGHT

KDM5A KDM5C KDM5D

7.27e-05151043SM00501
DomainARID_dom

KDM5A KDM5C KDM5D

7.27e-05151043IPR001606
DomainARID

KDM5A KDM5C KDM5D

7.27e-05151043PS51011
DomainARID

KDM5A KDM5C KDM5D

7.27e-05151043PF01388
DomainNlgn

NLGN4Y NLGN4X

3.04e-0451042IPR000460
DomainJmjC

KDM5A KDM5C KDM5D

3.12e-04241043PF02373
DomainIPT

EBF3 MST1R NFAT5

4.45e-04271043SM00429
DomainUbiquilin

UBQLN1 UBQLN4

4.54e-0461042IPR015496
DomainTIG

EBF3 MST1R NFAT5

6.73e-04311043PF01833
DomainJMJC

KDM5A KDM5C KDM5D

7.40e-04321043PS51184
DomainIPT

EBF3 MST1R NFAT5

7.40e-04321043IPR002909
DomainJmjC_dom

KDM5A KDM5C KDM5D

7.40e-04321043IPR003347
DomainJmjC

KDM5A KDM5C KDM5D

8.10e-04331043SM00558
DomainPHD

KDM5A KDM5C KAT6A KDM5D

8.14e-04751044PF00628
DomainZnf_PHD-finger

KDM5A KDM5C KAT6A KDM5D

9.89e-04791044IPR019787
DomainSTI1

UBQLN1 UBQLN4

1.34e-03101042SM00727
DomainSTI1_HS-bd

UBQLN1 UBQLN4

1.34e-03101042IPR006636
Domain-

KAT6A SATL1 ELP3

1.43e-034010433.40.630.30
DomainPHD

KDM5A KDM5C KAT6A KDM5D

1.54e-03891044SM00249
DomainZnf_PHD

KDM5A KDM5C KAT6A KDM5D

1.67e-03911044IPR001965
DomainZF_PHD_2

KDM5A KDM5C KAT6A KDM5D

1.96e-03951044PS50016
DomainAcyl_CoA_acyltransferase

KAT6A SATL1 ELP3

2.01e-03451043IPR016181
DomainZF_PHD_1

KDM5A KDM5C KAT6A KDM5D

2.04e-03961044PS01359
DomainCarboxylesterase_B_CS

NLGN4Y NLGN4X

2.30e-03131042IPR019819
DomainHEAT

ECPAS SF3B1 MROH1

2.42e-03481043PF02985
DomainCARBOXYLESTERASE_B_2

NLGN4Y NLGN4X

2.68e-03141042PS00941
DomainCOesterase

NLGN4Y NLGN4X

2.68e-03141042PF00135
DomainCarbesteraseB

NLGN4Y NLGN4X

2.68e-03141042IPR002018
DomainIg_E-set

EBF3 MST1R ASCC3 NFAT5

2.72e-031041044IPR014756
Domain-

KDM5A MARCHF8 KDM5C TRIM41 RNF44 KAT6A KDM5D RNF139

3.61e-0344910483.30.40.10
DomainZnf_RING-CH

MARCHF8 RNF139

3.95e-03171042IPR011016
DomainRINGv

MARCHF8 RNF139

3.95e-03171042SM00744
DomainZnf_RING/FYVE/PHD

KDM5A MARCHF8 KDM5C TRIM41 RNF44 KAT6A KDM5D RNF139

4.12e-034591048IPR013083
DomainHEAT

ECPAS SF3B1 MROH1

4.14e-03581043IPR000357
Domain6-PGluconate_DH_C-like

UBQLN1 UBQLN4

4.94e-03191042IPR008927
PathwayREACTOME_CHROMATIN_MODIFYING_ENZYMES

KDM5A KDM5C KAT6A REST KDM5D ELP3 SMARCA2 SMARCC1 EP300 HDAC2

6.56e-062728710M29619
Pubmed

Proteomic analyses reveal distinct chromatin-associated and soluble transcription factor complexes.

ATF7 ZNF536 SATB2 KDM5A EBF3 HIPK1 KDM5C ECPAS ELP3 EMSY NUP205 SF3B1 FAM120A NACC2 SMARCC1 ZFR SUFU STAG2 EP300 HDAC2

5.97e-128571142025609649
Pubmed

The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.

NCOA6 KDM5A KDM5C KAT6A REST KDM5D SMARCA2 SMARCC1 EP300 HDAC2

1.20e-101571141030186101
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

ATF7 NCOA6 SATB2 UBQLN1 EBF3 UPF1 BCL9 ECPAS INO80D EMSY FAM120A ERGIC3 SMARCA2 SMARCC1 KIAA1958 ZFR STAG2 EP300 PCM1 HDAC2

5.11e-1011031142034189442
Pubmed

Interaction network of human early embryonic transcription factors.

BCL9L NCOA6 ZNF536 SATB2 HIVEP2 KDM5A BCL9 EMSY DUXB SMARCA2 SMARCC1 EP300

2.03e-093511141238297188
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

ZNF449 ATF7 ZBTB16 HIVEP2 NLGN4Y ROR2 KAT6A CEP192 ECPAS OGDH PACS1 TSC22D1 FAM120A NACC2 PTPRS SMARCA2 CATSPERG NFAT5 FGGY STAG2 EP300 PCM1

2.80e-0914891142228611215
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

NCOA6 KDM5A KDM5C XPC REST BCL9 ECPAS EMSY PACS1 TBC1D10B SF3B1 SMARCA2 SMARCC1 KIAA1958 STAG2 PCM1

5.28e-097741141615302935
Pubmed

Human transcription factor protein interaction networks.

SOX6 BCL9L NCOA6 ZNF536 SATB2 KDM5A CEP192 UPF1 BCL9 INO80D EMSY DHX30 NUP205 FAM120A SMARCA2 SMARCC1 ZFR SUFU EP300 PCM1 HDAC2

7.46e-0914291142135140242
Pubmed

Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.

NCOA6 ZNF536 BCL9 SMARCA2 SMARCC1 STAG2 EP300

1.14e-0883114728794006
Pubmed

New nomenclature for chromatin-modifying enzymes.

KDM5A KDM5C KAT6A KDM5D ELP3 EP300

3.44e-0857114618022353
Pubmed

Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.

SOX6 ATF7 SATB2 TOX KDM5A EBF3 KDM5C REST KDM5D PRDM4 TSC22D1 SMARCA2 SMARCC1 ZFR NFAT5

6.74e-088081141520412781
Pubmed

Multiplexed barcoded CRISPR-Cas9 screening enabled by CombiGEM.

KDM5A KDM5C KDM5D EP300 HDAC2

7.64e-0833114526864203
Pubmed

A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract.

ZNF536 ZBTB16 HIVEP2 RARB TOX EBF3 RNF44 REST PRDM4 SMARCA2 SMARCC1 ZFR RNF139 NFAT5

9.02e-087091141422988430
Pubmed

Novel JARID1C/SMCX mutations in patients with X-linked mental retardation.

KDM5A KDM5C KDM5D

1.37e-074114316541399
Pubmed

Dual role of NRSF/REST in activation and repression of the glucocorticoid response.

REST SMARCA2 HDAC2

1.37e-074114317984088
Pubmed

TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.

NCOA6 ZNF536 SATB2 XPC BCL9 NEB AP3M1 MEPE ACAD11 SMARCA2 SMARCC1 STAG2 EP300

1.88e-076381141331182584
Pubmed

Chr21 protein-protein interactions: enrichment in proteins involved in intellectual disability, autism, and late-onset Alzheimer's disease.

SOX6 ATG5 HIVEP2 RARB UBQLN1 KDM5A HIPK1 UBQLN4 ADGRB3 XPC PRDM4 DHX30 CS SF3B1 FAM120A WIF1 EP300 PCM1

2.04e-0712851141835914814
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

UPF1 ECPAS DHX30 NUP205 SF3B1 FAM120A SMARCA2 SMARCC1 ZFR ASCC3 STAG2 PCM1 HDAC2

2.45e-076531141322586326
Pubmed

Functional proteomics mapping of a human signaling pathway.

NCOA6 ZBTB16 RARB UBQLN1 CYP11A1 HIPK1 UBQLN4 XPC PRDM4 DHX30 SF3B1 ASCC3

5.94e-075911141215231748
Pubmed

Systematic bromodomain protein screens identify homologous recombination and R-loop suppression pathways involved in genome integrity.

ZNF536 ATP7B KDM5A KDM5C KAT6A XPC INO80D TBC1D10B FAM120A ACAD11 SMARCA2 SMARCC1 ASCC3 EP300 PCM1 HDAC2

7.68e-0711161141631753913
Pubmed

Requirement for SWI/SNF chromatin-remodeling complex in Tat-mediated activation of the HIV-1 promoter.

SMARCA2 SMARCC1 EP300

1.19e-067114316601680
Pubmed

Proteomic analysis of FOXP proteins reveals interactions between cortical transcription factors associated with neurodevelopmental disorders.

SATB2 TOX EMSY NFAT5

2.11e-0628114429365100
Pubmed

REST repression of neuronal genes requires components of the hSWI.SNF complex.

REST SMARCA2 SMARCC1 HDAC2

2.11e-0628114412192000
Pubmed

Purification and characterization of mSin3A-containing Brg1 and hBrm chromatin remodeling complexes.

SMARCA2 SMARCC1 HDAC2

4.05e-0610114311238380
Pubmed

Screen identifies bromodomain protein ZMYND8 in chromatin recognition of transcription-associated DNA damage that promotes homologous recombination.

KDM5A EMSY SMARCA2 EP300 HDAC2

4.98e-0675114525593309
Pubmed

The histone H3K4 demethylase SMCX links REST target genes to X-linked mental retardation.

KDM5C REST HDAC2

5.55e-0611114317468742
Pubmed

Ikaros DNA-binding proteins direct formation of chromatin remodeling complexes in lymphocytes.

SMARCA2 SMARCC1 HDAC2

5.55e-0611114310204490
Pubmed

The primary microRNA-208b interacts with Polycomb-group protein, Ezh2, to regulate gene expression in the heart.

MYH6 SMARCA2 HDAC2

5.55e-0611114324137001
Pubmed

Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism.

KDM5A KDM5C UPF1 REST PRDM4 FAM186B INO80D EMSY MAD2L1BP DHX30 NUP205 CS SMARCC1 RNF139 EP300 PCM1

7.05e-0613271141632694731
Pubmed

Proteomics of herpes simplex virus replication compartments: association of cellular DNA replication, repair, recombination, and chromatin remodeling proteins with ICP8.

SMARCA2 SMARCC1 HDAC2

7.38e-0612114315140983
Pubmed

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.

ECPAS SF3B1 SMARCA2 SMARCC1 ZFR EP300 HDAC2

8.54e-06220114735785414
Pubmed

Identification and Functional Characterization of a Novel Androgen Receptor Coregulator, EAP1.

SMARCA2 SMARCC1 EP300 HDAC2

9.13e-0640114434585037
Pubmed

Dynamic patterns of histone H3 lysine 4 methyltransferases and demethylases during mouse preimplantation development.

KDM5A KDM5C KDM5D

9.58e-0613114324619213
Pubmed

A protein interaction network for pluripotency of embryonic stem cells.

REST NACC2 SMARCC1 HDAC2

1.01e-0541114417093407
Pubmed

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1-CoREST interactome during embryonic stem cell differentiation.

ZNF536 SATB2 KDM5A UBQLN4 ECPAS KIAA1958 ASCC3 PCM1 HDAC2

1.02e-05418114934709266
Pubmed

Mouse H-Y encoding Smcy gene and its X chromosomal homolog Smcx.

KDM5C KDM5D

1.07e-052114210441747
Pubmed

Inefficient purifying selection: the mammalian Y chromosome in the rodent genus Mus.

KDM5C KDM5D

1.07e-052114216416087
Pubmed

Development of an autism severity score for mice using Nlgn4 null mutants as a construct-valid model of heritable monogenic autism.

NLGN4Y NLGN4X

1.07e-052114223183221
Pubmed

Juvenile manifestation of ultrasound communication deficits in the neuroligin-4 null mutant mouse model of autism.

NLGN4Y NLGN4X

1.07e-052114224855039
Pubmed

Essential role of BCL9-2 in the switch between beta-catenin's adhesive and transcriptional functions.

BCL9L BCL9

1.07e-052114215371335
Pubmed

Epigenetic regulation of cardiac electrophysiology in atrial fibrillation: HDAC2 determines action potential duration and suppresses NRSF in cardiomyocytes.

REST HDAC2

1.07e-052114233630168
Pubmed

Sex-specific microglia state in the Neuroligin-4 knock-out mouse model of autism spectrum disorder.

NLGN4Y NLGN4X

1.07e-052114237001827
Pubmed

Mutations of histone demethylase genes encoded by X and Y chromosomes, Kdm5c and Kdm5d, lead to noncompaction cardiomyopathy in mice.

KDM5C KDM5D

1.07e-052114232081420
Pubmed

MOZ is fused to p300 in an acute monocytic leukemia with t(8;22).

KAT6A EP300

1.07e-052114210824998
Pubmed

SMARCA2 and other genome-wide supported schizophrenia-associated genes: regulation by REST/NRSF, network organization and primate-specific evolution.

REST SMARCA2

1.07e-052114220457675
Pubmed

BCL9/BCL9L promotes tumorigenicity through immune-dependent and independent mechanisms in triple negative breast cancer.

BCL9L BCL9

1.07e-052114233767438
Pubmed

A mouse Y chromosome gene encoded by a region essential for spermatogenesis and expression of male-specific minor histocompatibility antigens.

KDM5C KDM5D

1.07e-05211427524912
Pubmed

Regulation of RE1 protein silencing transcription factor (REST) expression by HIP1 protein interactor (HIPPI).

IFT57 REST

1.07e-052114221832040
Pubmed

Unusually rapid evolution of Neuroligin-4 in mice.

NLGN4Y NLGN4X

1.07e-052114218434543
Pubmed

Targeting BCL9/BCL9L enhances antigen presentation by promoting conventional type 1 dendritic cell (cDC1) activation and tumor infiltration.

BCL9L BCL9

1.07e-052114238811552
Pubmed

Increased Network Inhibition in the Dentate Gyrus of Adult Neuroligin-4 Knock-Out Mice.

NLGN4Y NLGN4X

1.07e-052114237080762
Pubmed

Autism Related Neuroligin-4 Knockout Impairs Intracortical Processing but not Sensory Inputs in Mouse Barrel Cortex.

NLGN4Y NLGN4X

1.07e-052114229106499
Pubmed

Perturbed Hippocampal Synaptic Inhibition and γ-Oscillations in a Neuroligin-4 Knockout Mouse Model of Autism.

NLGN4Y NLGN4X

1.07e-052114226456829
Pubmed

Nlgn4 knockout induces network hypo-excitability in juvenile mouse somatosensory cortex in vitro.

NLGN4Y NLGN4X

1.07e-052114224104404
Pubmed

A Cluster of Autism-Associated Variants on X-Linked NLGN4X Functionally Resemble NLGN4Y.

NLGN4Y NLGN4X

1.07e-052114232243781
Pubmed

Analysis of mutation rates in the SMCY/SMCX genes shows that mammalian evolution is male driven.

KDM5C KDM5D

1.07e-05211429060413
Pubmed

Absence of deficits in social behaviors and ultrasonic vocalizations in later generations of mice lacking neuroligin4.

NLGN4Y NLGN4X

1.07e-052114222989184
Pubmed

Bcl9/Bcl9l are critical for Wnt-mediated regulation of stem cell traits in colon epithelium and adenocarcinomas.

BCL9L BCL9

1.07e-052114220682801
Pubmed

USP7 targets XIAP for cancer progression: Establishment of a p53-independent therapeutic avenue for glioma.

NCOA6 MYO7B NEB OGDH DHX30 SF3B1 SMARCC1

1.27e-05234114736243803
Pubmed

Wnt regulation: exploring Axin-Disheveled interactions and defining mechanisms by which the SCF E3 ubiquitin ligase is recruited to the destruction complex.

SATL1 ECPAS OGDH DHX30 TBC1D10B CS SF3B1 FAM120A SMARCC1 ASCC3 NFAT5 HDAC2

1.46e-058091141232129710
Pubmed

BRG1-SWI/SNF-dependent regulation of the Wt1 transcriptional landscape mediates epicardial activity during heart development and disease.

MYH6 SMARCA2 SMARCC1

1.52e-0515114328737171
Pubmed

Distinct mammalian SWI/SNF chromatin remodeling complexes with opposing roles in cell-cycle control.

SMARCA2 SMARCC1 HDAC2

1.52e-0515114317255939
Pubmed

Cyclin E associates with BAF155 and BRG1, components of the mammalian SWI-SNF complex, and alters the ability of BRG1 to induce growth arrest.

SF3B1 SMARCA2 SMARCC1

1.52e-051511439891079
Pubmed

Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders.

KDM5A EBF3 ADGRB3 UPF1 BCL9 EMSY SF3B1 FAM120A PTPRS SMARCC1 ZFR PCM1 HDAC2

1.71e-059631141328671696
Pubmed

A human RNA polymerase II complex containing factors that modify chromatin structure.

SMARCA2 SMARCC1 EP300

1.86e-051611439710619
Pubmed

Cohesin regulates tissue-specific expression by stabilizing highly occupied cis-regulatory modules.

REST STAG2 EP300

1.86e-0516114322780989
Pubmed

Comparative Application of BioID and TurboID for Protein-Proximity Biotinylation.

BCL9L NCOA6 BCL9 AP3M1 NUP205 SMARCA2 SMARCC1 ZFR EP300

2.07e-05457114932344865
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

ATF7 NCOA6 KDM5A UBQLN4 XPC REST INO80D EMSY SF3B1 SMARCC1 ZFR STAG2 EP300 SAMD4A HDAC2

2.21e-0512941141530804502
Pubmed

The polycomb group protein L3mbtl2 assembles an atypical PRC1-family complex that is essential in pluripotent stem cells and early development.

KDM5C REST SMARCC1 HDAC2

2.43e-0551114422770845
Pubmed

Systematic analysis of human protein complexes identifies chromosome segregation proteins.

STK26 XPC CEP192 MAD2L1BP DHX30 PACS1 SF3B1 FAM120A SMARCA2 SMARCC1 ZFR STAG2 PCM1 HDAC2

2.61e-0511551141420360068
Pubmed

TRIM28 interacts with EZH2 and SWI/SNF to activate genes that promote mammosphere formation.

SMARCA2 SMARCC1 EP300

2.70e-0518114328068325
Pubmed

mSin3A/histone deacetylase 2- and PRMT5-containing Brg1 complex is involved in transcriptional repression of the Myc target gene cad.

SMARCA2 SMARCC1 HDAC2

2.70e-0518114314559996
Pubmed

Hdac4 Interactions in Huntington's Disease Viewed Through the Prism of Multiomics.

ADGRB3 UPF1 AP3M1 DHX30 TBC1D10B FAM120A ZFR NFAT5 PCM1

2.80e-05475114931040226
Pubmed

The interactions of Bcl9/Bcl9L with β-catenin and Pygopus promote breast cancer growth, invasion, and metastasis.

BCL9L BCL9

3.19e-053114234545187
Pubmed

Histone acetyltransferase activity of p300 is required for transcriptional repression by the promyelocytic leukemia zinc finger protein.

ZBTB16 EP300

3.19e-053114215964811
Pubmed

RBP2 belongs to a family of demethylases, specific for tri-and dimethylated lysine 4 on histone 3.

KDM5A KDM5C

3.19e-053114217320161
Pubmed

KDM5 family of demethylases promotes CD44-mediated chemoresistance in pancreatic adenocarcinomas.

KDM5A KDM5C

3.19e-053114237880235
Pubmed

KIF15 promotes human glioblastoma progression under the synergistic transactivation of REST and P300.

REST EP300

3.19e-053114239430242
Pubmed

Disruption of SATB2 or its long-range cis-regulation by SOX9 causes a syndromic form of Pierre Robin sequence.

SATB2 EP300

3.19e-053114224363063
Pubmed

ATRA activates and PDGF-BB represses the SM22α promoter through KLF4 binding to, or dissociating from, its cis-DNA elements.

EP300 HDAC2

3.19e-053114221252119
Pubmed

Histone demethylase KDM5 regulates cardiomyocyte maturation by promoting fatty acid oxidation, oxidative phosphorylation, and myofibrillar organization.

KDM5A KDM5C

3.19e-053114238230606
Pubmed

Allosteric remodelling of the histone H3 binding pocket in the Pygo2 PHD finger triggered by its binding to the B9L/BCL9 co-factor.

BCL9L BCL9

3.19e-053114220637214
Pubmed

Acetylation inactivates the transcriptional repressor BCL6.

EP300 HDAC2

3.19e-053114212402037
Pubmed

Evolution of the Autism-Associated Neuroligin-4 Gene Reveals Broad Erosion of Pseudoautosomal Regions in Rodents.

NLGN4Y NLGN4X

3.19e-053114232011705
Pubmed

Differential regulation of β-catenin-mediated transcription via N- and C-terminal co-factors governs identity of murine intestinal epithelial stem cells.

BCL9L BCL9

3.19e-053114233649334
Pubmed

Identification of a mouse male-specific transplantation antigen, H-Y.

KDM5C KDM5D

3.19e-05311427544442
Pubmed

Characterization of a Linked Jumonji Domain of the KDM5/JARID1 Family of Histone H3 Lysine 4 Demethylases.

KDM5A KDM5C

3.19e-053114226645689
Pubmed

Analysis of the neuroligin 4Y gene in patients with autism.

NLGN4Y NLGN4X

3.19e-053114218628683
Pubmed

A new hepatocytic isoform of PLZF lacking the BTB domain interacts with ATP7B, the Wilson disease protein, and positively regulates ERK signal transduction.

ZBTB16 ATP7B

3.19e-053114216676348
Pubmed

Acetylation-Dependent Control of Global Poly(A) RNA Degradation by CBP/p300 and HDAC1/2.

EP300 HDAC2

3.19e-053114227635759
Pubmed

Neuroligin-4 is localized to glycinergic postsynapses and regulates inhibition in the retina.

NLGN4Y NLGN4X

3.19e-053114221282647
Pubmed

An atlas of combinatorial transcriptional regulation in mouse and man.

SOX6 ZBTB16 HIVEP2 RARB EBF3 KDM5C REST KDM5D PRDM4 SUFU EP300 HDAC2

3.22e-058771141220211142
Pubmed

ALL-1 is a histone methyltransferase that assembles a supercomplex of proteins involved in transcriptional regulation.

SMARCA2 SMARCC1 HDAC2

4.37e-0521114312453419
Pubmed

Requiem protein links RelB/p52 and the Brm-type SWI/SNF complex in a noncanonical NF-kappaB pathway.

SMARCA2 SMARCC1 HDAC2

4.37e-0521114320460684
Pubmed

Two Distinct Types of E3 Ligases Work in Unison to Regulate Substrate Ubiquitylation.

ATF7 ZYG11B UPF1 ELP3 ACAD11

4.89e-05120114527565346
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

STK26 UPF1 ECPAS DHX30 NUP205 SF3B1 SMARCC1 ASCC3 STAG2 HDAC2

4.95e-056381141033239621
Pubmed

MECP2 directly interacts with RNA polymerase II to modulate transcription in human neurons.

KDM5A EBF3 XPC UPF1 OGDH DHX30 NUP205 TBC1D10B SF3B1 PAN2 SMARCC1 CATSPERG HDAC2

5.66e-0510821141338697112
Pubmed

Mutations of the Transcriptional Corepressor ZMYM2 Cause Syndromic Urinary Tract Malformations.

SATB2 UBQLN1 UBQLN4 KIAA1958 HDAC2

5.94e-05125114532891193
Pubmed

MOZ-TIF2 alters cofactor recruitment and histone modification at the RARbeta2 promoter: differential effects of MOZ fusion proteins on CBP- and MOZ-dependent activators.

RARB KAT6A

6.36e-054114216613851
Pubmed

The X-linked mental retardation gene SMCX/JARID1C defines a family of histone H3 lysine 4 demethylases.

KDM5C KDM5D

6.36e-054114217320160
Pubmed

Herp enhances ER-associated protein degradation by recruiting ubiquilins.

UBQLN1 UBQLN4

6.36e-054114218307982
InteractionERG interactions

SOX6 NCOA6 SATB2 HIPK1 BCL9 EMSY SF3B1 SMARCA2 SMARCC1 EP300

2.84e-0722310610int:ERG
InteractionEGR2 interactions

BCL9L NCOA6 ZNF536 HIVEP2 BCL9 EMSY SMARCA2 SMARCC1 EP300

3.00e-071711069int:EGR2
InteractionCEBPA interactions

ATF7 NCOA6 SATB2 ZBTB16 RARB UBQLN1 EBF3 UPF1 BCL9 ECPAS INO80D EMSY FAM120A ERGIC3 SMARCA2 SMARCC1 KIAA1958 ZFR STAG2 EP300 PCM1 HDAC2

4.31e-07124510622int:CEBPA
InteractionLHX6 interactions

BCL9L ZNF536 SATB2 KDM5C ROR2 BCL9

5.95e-07581066int:LHX6
InteractionSP7 interactions

BCL9L NCOA6 ZNF536 SATB2 BCL9 DHX30 NUP205 SMARCA2 SMARCC1 ZFR EP300

5.99e-0730410611int:SP7
InteractionGATA3 interactions

ZNF536 SATB2 RARB BCL9 SMARCA2 SMARCC1 ZFR EP300 HDAC2

6.37e-071871069int:GATA3
InteractionHDAC1 interactions

SOX6 ZNF536 SATB2 ZBTB16 RARB KDM5A KDM5C UBQLN4 REST ECPAS PRDM4 EMSY NACC2 SMARCA2 SMARCC1 ASCC3 STAG2 EP300 PCM1 HDAC2

1.14e-06110810620int:HDAC1
InteractionTBR1 interactions

BCL9L ZNF536 SATB2 BCL9 MST1R SMARCA2 EP300

2.23e-061131067int:TBR1
InteractionTBXT interactions

NCOA6 ZNF536 SATB2 BCL9 SMARCA2 SMARCC1 EP300

2.66e-061161067int:TBXT
InteractionFOXK2 interactions

SATB2 KDM5A KAT6A REST EMSY SF3B1 FAM120A EP300 HDAC2

2.95e-062251069int:FOXK2
InteractionGATA1 interactions

SATB2 ZBTB16 BCL9 SMARCA2 SMARCC1 ZFR EP300 HDAC2

3.39e-061711068int:GATA1
InteractionTLX1 interactions

ZNF536 SATB2 KAT6A BCL9 DHX30 SMARCA2 SMARCC1 EP300

4.03e-061751068int:TLX1
InteractionPAX9 interactions

BCL9L NCOA6 ZNF536 SATB2 BCL9 SMARCA2 EP300

5.67e-061301067int:PAX9
InteractionCRX interactions

BCL9L ZNF536 SATB2 ROR2 BCL9 SMARCA2 SMARCC1 SUFU EP300

7.89e-062541069int:CRX
InteractionCHD3 interactions

SOX6 SATB2 KAT6A DHX30 TSC22D1 SF3B1 FAM120A PTPRS SMARCA2 SMARCC1 ZFR ASCC3 STAG2 EP300 HDAC2

9.83e-0675710615int:CHD3
InteractionGATA2 interactions

NCOA6 ZNF536 SATB2 ZBTB16 BCL9 SMARCA2 SMARCC1 EP300

1.04e-051991068int:GATA2
InteractionHDAC2 interactions

SOX6 SATB2 ZBTB16 KDM5A KDM5C UBQLN4 REST PRDM4 ELP3 EMSY NACC2 SMARCA2 SMARCC1 STAG2 EP300 HDAC2

1.14e-0586510616int:HDAC2
InteractionNR3C1 interactions

NCOA6 ZNF536 SATB2 ZBTB16 RARB KDM5A XPC BCL9 NEB AP3M1 MEPE ACAD11 SMARCA2 SMARCC1 STAG2 EP300 HDAC2

1.26e-0597410617int:NR3C1
InteractionKLF4 interactions

UPF1 BCL9 DHX30 SMARCA2 ZFR EP300 HDAC2

2.20e-051601067int:KLF4
InteractionMORF4L1 interactions

ZNF449 KDM5A KDM5C TRIM41 EMSY EP300 PCM1 HDAC2

2.21e-052211068int:MORF4L1
InteractionRARA interactions

NCOA6 ZBTB16 RARB UBQLN1 NRBF2 KDM5A EP300 HDAC2

2.36e-052231068int:RARA
InteractionSLBP interactions

KAT6A UPF1 SF3B1 ACAD11 EP300

2.73e-05671065int:SLBP
InteractionING2 interactions

SOX6 SMARCC1 EP300 PCM1 HDAC2

2.93e-05681065int:ING2
InteractionGCM1 interactions

ZNF536 BCL9 SMARCA2 SMARCC1 EP300

2.93e-05681065int:GCM1
InteractionMORF4L2 interactions

SATB2 KDM5A KDM5C TRIM41 KAT6A EMSY HDAC2

3.01e-051681067int:MORF4L2
InteractionDDIT3 interactions

ATF7 EMSY SMARCA2 SMARCC1 EP300 PCM1

4.13e-051201066int:DDIT3
InteractionALG13 interactions

ROR2 UPF1 BCL9 FAM120A ZFR EP300 PCM1

5.19e-051831067int:ALG13
InteractionLHX2 interactions

BCL9L ZNF536 SATB2 BCL9 DHX30 SMARCA2 SMARCC1

5.19e-051831067int:LHX2
InteractionTFF1 interactions

UBQLN1 UBQLN4 EP300 HDAC2

6.30e-05411064int:TFF1
InteractionHNF1B interactions

SOX6 ZNF536 SATB2 BCL9 SMARCA2 SMARCC1 EP300

6.58e-051901067int:HNF1B
InteractionFOXJ2 interactions

ZNF536 SATB2 KDM5C EMSY HDAC2

6.83e-05811065int:FOXJ2
InteractionFOXC2 interactions

ZNF536 SATB2 EBF3 HDAC2

6.94e-05421064int:FOXC2
InteractionMYB interactions

ZNF536 SATB2 UPF1 EMSY SMARCA2 EP300

7.33e-051331066int:MYB
InteractionFOXB1 interactions

SATB2 ECPAS NUP205 SF3B1 ZFR STAG2

7.97e-051351066int:FOXB1
InteractionFOXL1 interactions

ZNF536 SATB2 BCL9 ECPAS NUP205 SF3B1 HDAC2

8.00e-051961067int:FOXL1
InteractionSLC5A10 interactions

UBQLN1 UBQLN4

8.19e-0531062int:SLC5A10
InteractionKDM5C interactions

SATB2 KDM5A KDM5C REST SUFU HDAC2

9.36e-051391066int:KDM5C
InteractionFOXP3 interactions

SATB2 HIPK1 ELP3 DHX30 NACC2 SMARCC1 ZFR NFAT5 EP300 HDAC2

9.41e-0543210610int:FOXP3
InteractionGSC interactions

BCL9L ZNF536 SATB2 BCL9 EP300

9.61e-05871065int:GSC
InteractionFA2H interactions

MARCHF8 UBQLN4 ECPAS ERGIC3

9.95e-05461064int:FA2H
InteractionHNF4A interactions

NCOA6 SATB2 NRBF2 ELP3 EMSY SMARCA2 SMARCC1 EP300

1.03e-042751068int:HNF4A
InteractionPPARA interactions

NCOA6 COL8A1 NRBF2 VWA5A EP300

1.25e-04921065int:PPARA
InteractionFOXI1 interactions

ZNF536 SATB2 BCL9 SMARCA2 EP300

1.25e-04921065int:FOXI1
InteractionSIN3B interactions

ZBTB16 KDM5A REST EMSY SMARCA2 HDAC2

1.27e-041471066int:SIN3B
InteractionFOSB interactions

ATF7 ROR2 EP300 HDAC2

1.28e-04491064int:FOSB
InteractionSIRT7 interactions

UPF1 ECPAS DHX30 NUP205 SF3B1 FAM120A SMARCA2 SMARCC1 ZFR ASCC3 STAG2 PCM1 HDAC2

1.44e-0474410613int:SIRT7
InteractionRAI2 interactions

SOX6 UBQLN1 UBQLN4

1.51e-04201063int:RAI2
InteractionTLX3 interactions

BCL9L NCOA6 SATB2 ROR2 BCL9 DHX30 SMARCA2 EP300

1.52e-042911068int:TLX3
InteractionSOX9 interactions

NCOA6 BCL9 SMARCA2 SMARCC1 EP300

1.61e-04971065int:SOX9
InteractionFOXP4 interactions

SOX6 SATB2 TOX EMSY NFAT5

1.69e-04981065int:FOXP4
InteractionCENPA interactions

ZNF536 KAT6A XPC ECPAS ELP3 NUP205 SMARCA2 SMARCC1 STAG2

1.70e-043771069int:CENPA
InteractionRNF2 interactions

NCOA6 KDM5C TRIM41 UPF1 REST EMSY DHX30 NUP205 SF3B1 FAM120A PAN2 SMARCC1 ZFR HDAC2

1.77e-0486610614int:RNF2
InteractionTFCP2L1 interactions

SATB2 UBQLN4 EMSY SMARCC1 HDAC2

1.77e-04991065int:TFCP2L1
InteractionDHX9 interactions

ATG5 MARCHF8 KAT6A UPF1 REST OGDH DHX30 TBC1D10B FAM120A PAN2 ZFR EP300

1.88e-0466210612int:DHX9
InteractionNFIX interactions

SOX6 ZNF536 SATB2 EMSY CS SMARCA2 SMARCC1

1.99e-042271067int:NFIX
InteractionSSBP4 interactions

BCL9L ZYG11B BCL9 EP300

2.63e-04591064int:SSBP4
InteractionRXRA interactions

NCOA6 ZBTB16 RARB NRBF2 UBQLN4 EP300

2.72e-041691066int:RXRA
InteractionEWSR1 interactions

BCL9L NCOA6 NRBF2 KDM5C KAT6A UPF1 REST BCL9 SF3B1 SMARCC1 ZFR EP300 PCM1 HDAC2

2.81e-0490610614int:EWSR1
InteractionPTN interactions

UBQLN1 UBQLN4 MAD2L1BP TSC22D1 PTPRS

3.02e-041111065int:PTN
InteractionIGF2BP1 interactions

SOX6 UBQLN1 UPF1 REST DHX30 FAM120A PAN2 ZFR EP300 HDAC2

3.47e-0450810610int:IGF2BP1
InteractionASF1A interactions

SOX6 NCOA6 ZNF536 EMSY PAN2 SMARCC1 EP300

3.48e-042491067int:ASF1A
InteractionSATB1 interactions

SOX6 SATB2 ZBTB16 EP300 HDAC2

3.70e-041161065int:SATB1
InteractionPIPSL interactions

CEP192 ELP3 TLR10 FAM120A VWA5A TSPYL4 STAG2

3.74e-042521067int:PIPSL
InteractionABT1 interactions

TRIM41 UPF1 ELP3 DHX30 SF3B1 FAM120A ZFR ASCC3 EP300

3.96e-044231069int:ABT1
InteractionNUP35 interactions

BCL9L NCOA6 BCL9 NUP205 WIF1 SMARCA2 SMARCC1 ZFR EP300

4.03e-044241069int:NUP35
InteractionRNPS1 interactions

EBF3 TRIM41 KAT6A UBQLN4 XPC UPF1 SF3B1 ZFR EP300

4.10e-044251069int:RNPS1
InteractionKDM1A interactions

SOX6 KIAA0408 SATB2 NRBF2 KDM5A UBQLN4 ECPAS SMARCA2 SMARCC1 KIAA1958 ASCC3 EP300 PCM1 HDAC2

4.12e-0494110614int:KDM1A
InteractionZFPM2 interactions

UBQLN4 EP300 HDAC2

4.21e-04281063int:ZFPM2
InteractionRBM4B interactions

STK26 KAT6A UPF1 DHX30 FAM120A ZFR ASCC3

4.73e-042621067int:RBM4B
InteractionMTA2 interactions

SATB2 ZBTB16 DHX30 NACC2 SMARCA2 SMARCC1 STAG2 EP300 HDAC2

4.85e-044351069int:MTA2
CytobandEnsembl 112 genes in cytogenetic band chr7q11

SPDYE17 SPDYE10 SPDYE9 SPDYE12 SPDYE11 SPDYE13 SPDYE15 SPDYE8 SPDYE14

3.35e-082711169chr7q11
Cytoband7q11.23

SPDYE10 SPDYE9 SPDYE8 SPDYE14

1.12e-049711647q11.23
GeneFamilyHistone deacetylases, class I|EMSY complex|NuRD complex|SIN3 histone deacetylase complex

KDM5A EMSY HDAC2

1.09e-05126831243
GeneFamilyAT-rich interaction domain containing

KDM5A KDM5C KDM5D

2.24e-0515683418
GeneFamilyZinc fingers ZZ-type|Lysine acetyltransferases

KAT6A ELP3 EP300

3.33e-0517683486
GeneFamilyPHD finger proteins|Lysine demethylases

KDM5A KDM5C KDM5D

9.73e-0524683485
GeneFamilyUbiquilin family

UBQLN1 UBQLN4

1.38e-045682783
GeneFamilyPHD finger proteins

KDM5A KDM5C KAT6A KDM5D

3.67e-049068488
GeneFamilySpeedy/RINGO cell cycle regulator family

SPDYE9 SPDYE8

8.98e-0412682756
GeneFamilyGCN5 related N-acetyltransferases

SATL1 ELP3

3.65e-03246821134
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

HIVEP2 TOX KDM5A HIPK1 RNF44 KAT6A SUSD3 REST AP3M1 INO80D PACS1 SF3B1 VWA5A SMARCA2 ZFR ASCC3 RNF139 NFAT5 STAG2 EP300 PCM1

7.75e-07149210921M40023
CoexpressionGSE17974_0H_VS_48H_IN_VITRO_ACT_CD4_TCELL_UP

SOX6 TOX MARCHF8 KAT6A VWA5A RNF139 TSPYL4

1.61e-051921097M4174
CoexpressionGSE4984_LPS_VS_VEHICLE_CTRL_TREATED_DC_DN

NCOA6 ZBTB16 TOX ECPAS OGDH SUFU NFAT5

1.96e-051981097M6511
CoexpressionAtlasDevelopingGonad_e16.5_epididymis_emap-29702_top-relative-expression-ranked_1000

COL8A1 KDM5C STK26 ADGRB3 REST SF3B1 ADGRG2 VWA5A WIF1 SMARCA2 SMARCC1 ZFR NFAT5 SAMD4A HDAC2

6.15e-0679010315gudmap_developingGonad_e16.5_epididymis_1000
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

STK26 KAT6A SMARCC1 ASCC3 STAG2 EP300 PCM1

4.05e-0718411171154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellTracheal-NucSeq-Stromal-Chondrocytic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SOX6 ZBTB16 TOX SLC38A4 STK26 ROR2 SAMD4A

7.09e-072001117b5a54b9baf79aea01f76a161f0a39bbe87eb4945
ToppCellTracheal-NucSeq-Stromal-Chondrocytic-Chondrocyte|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SOX6 ZBTB16 TOX SLC38A4 STK26 ROR2 SAMD4A

7.09e-072001117f5bd0b30e478dac09f68c46b0781f5f2e7e3c693
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_PVALB_2|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX6 COL4A1 ZNF536 TOX NACC2 WIF1

6.22e-061811116153709b4dd3d81e09f251fa8765b58bed1932fda
ToppCellCOVID-19-Heart-Fib_2|COVID-19 / Disease (COVID-19 only), tissue and cell type

SOX6 COL4A1 COL8A1 EBF3 ADGRB3 NLGN4X

7.05e-0618511168f95d8e591bf7379d13f5a0545b0cb49e2b1ab5d
ToppCellCOVID-19-Heart-Fib_1|COVID-19 / Disease (COVID-19 only), tissue and cell type

SOX6 COL4A1 COL8A1 EBF3 ADGRB3 NLGN4X

7.73e-061881116fe361215f4ba841aa5e1e581fb56f2f4d3ccd201
ToppCellE12.5-Mesenchymal-mesenchymal_fibroblast-tracheal_fibroblast|E12.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

SOX6 KIAA0408 RARB TOX TSC22D1 WIF1

7.73e-0618811169b95730ddd13eb4624321bab3ab4989414977ca3
ToppCellPSB-critical-LOC-Epithelial-Ionocyte|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

COL4A1 COL8A1 ADGRB3 SUSD3 NLGN4X ADGRG2

8.46e-0619111168f4637e801554e2343b974fe7794f01dd2151418
ToppCellLV-01._Fibroblast_I|LV / Chamber and Cluster_Paper

COL4A1 COL8A1 ZBTB16 ADGRB3 NLGN4X PTPRS

8.98e-061931116dc17f3b9758936d428cf17f77a1ce6d4c479b165
ToppCelldroplet-Limb_Muscle-MUSCLE-1m|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A1 ZBTB16 TSC22D1 NEO1 PTPRS WIF1

9.52e-061951116fee9d13f48149cd5f921cfe4b8b3053cf6a6dbd2
ToppCellPND03-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway-SCMF-SCMF_mature|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF536 SLC38A4 TSC22D1 ADGRG2 WIF1 SAMD4A

1.01e-05197111643b5f8e917506c1717f9311584901b506ffd2c79
ToppCellBronchial-NucSeq-Stromal-Chondrocytic|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SOX6 EBF3 SLC38A4 ROR2 ADGRB3 SAMD4A

1.10e-052001116b7b9441fa7ab0d43741a2ebd5ec1a48d537c6d47
ToppCellBronchial-NucSeq-Stromal-Chondrocytic-Chondrocyte|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

SOX6 EBF3 SLC38A4 ROR2 ADGRB3 SAMD4A

1.10e-0520011167c673ad0ea503ebd196579684d25d5f9e6a41030
ToppCellTCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma-Serous_Cystadenocarcinoma-5|TCGA-Ovary / Sample_Type by Project: Shred V9

HIPK1 FAM186B INO80D PAN2 SMARCC1

6.02e-05166111532d2eaf8a5d03881bf74d680825af2d5110b082d
ToppCellLA-16._Neuronal|World / Chamber and Cluster_Paper

ZNF536 TOX ADGRB3 NLGN4X TMEM132A

6.37e-0516811152fd1fd2a16ac1c5eb028f93cc3a2477c7747693e
ToppCelldroplet-Heart-nan-3m|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYH6 ZBTB16 ZFR ASCC3 PCM1

7.93e-051761115749b47eac5436fa34e0d243ffbc6f1897f4e431e
ToppCellMid-temporal_gyrus_(MTG)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_PVALB_2|Mid-temporal_gyrus_(MTG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX6 COL4A1 ZNF536 NACC2 WIF1

8.59e-0517911153b0f8781232e1d42b6f8913bc989a14b3f978e79
ToppCellFetal_29-31_weeks-Mesenchymal-myofibroblast_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

COL4A1 ZNF536 ROR2 ADGRB3 SAMD4A

9.29e-051821115ed6ae0fd8653f213fe29906a6a4e0729a62e1b75
ToppCellHippocampus-Neuronal-Inhibitory|Hippocampus / BrainAtlas - Mouse McCarroll V32

ZNF536 NEB NACC2 WIF1 TSPYL4

9.29e-051821115b54ae650c04dfd0759c5f5e752b9bf684dd36516
ToppCellCOVID-19-Heart-Fib_+_EC_+_Pericyte|COVID-19 / Disease (COVID-19 only), tissue and cell type

COL4A1 COL8A1 EBF3 ADGRB3 NLGN4X

9.29e-051821115fbd5e332df73bf7141c822fa67b76367dc962017
ToppCellControl-Stromal_mesenchymal-Lung_smooth_muscle-MatrixFB_->_Myofibroblast|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

KIAA0408 ZNF536 ROR2 PTPRS WIF1

9.53e-0518311157eae9b3b4d1c9b135fa7cff348393d4adec474b4
ToppCell21-Trachea-Mesenchymal-Airway_Smooth_Muscle|Trachea / Age, Tissue, Lineage and Cell class

COL4A1 ZNF536 CYP11A1 ROR2 ADGRB3

9.78e-05184111586a96cd88e50eacad1f0badfbbf6dc626f41725e
ToppCellPCW_05-06-Mesenchymal-Mesenchymal_fibroblastic-mes_immature_COL13A1^pos_fibro2_(5)|PCW_05-06 / Celltypes from embryonic and fetal-stage human lung

SOX6 COL8A1 ZNF536 TOX ROR2

1.03e-0418611157def03dd856b765bd3f493288641981c4f7fd26e
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1-6_LAMP5_CA13_(Lamp5_Lhx6_1)|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX6 COL4A1 ZNF536 TOX ROR2

1.08e-0418811153139540a656c0436b2123ea50741ff8d00112165
ToppCellControl-Stromal_mesenchymal-Lung_smooth_muscle|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

KIAA0408 ZNF536 NLGN4Y ROR2 PTPRS

1.11e-04189111545e588b2a4ad9e3ff74e22d9d627ed3571f3b8b8
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_PVALB_1|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX6 ZNF536 MEPE NACC2 WIF1

1.14e-0419011153f22c118d552345f731d4d49f0bcb5765d93de3b
ToppCellLV-01._Fibroblast_I|World / Chamber and Cluster_Paper

COL4A1 COL8A1 ZBTB16 ADGRB3 NLGN4X

1.14e-04190111512992ec80a7b4f4f17de693f0719ee061a9918fd
ToppCellLV-02._Fibroblast_II|World / Chamber and Cluster_Paper

COL8A1 ZBTB16 NLGN4Y ADGRB3 NLGN4X

1.16e-041911115d36565257ccba8c1bbed2c1c01be66a9cbb5f834
ToppCellRV-01._Fibroblast_I|World / Chamber and Cluster_Paper

COL4A1 ZBTB16 ADGRB3 NLGN4X PTPRS

1.16e-04191111570c067c54084bfb02c29bab085f4defd477194fb
ToppCellRV-01._Fibroblast_I|RV / Chamber and Cluster_Paper

COL4A1 COL8A1 ADGRB3 NLGN4X PTPRS

1.19e-041921115356160b113c3305a61ceeaff33ce3c9da0be2878
ToppCell10x5'v1-week_17-19-Mesenchymal_osteo-stroma-early_osteoblast|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

COL8A1 SATB2 RARB MEPE WIF1

1.22e-0419311155e46a9f65e85aca78f825fdef88a95b97eec8743
ToppCellprimary_auditory_cortex_(A1C)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_PVALB_1|primary_auditory_cortex_(A1C) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX6 ZNF536 MEPE VWA5A WIF1

1.22e-041931115c4b22b62f3cc7bf0ec0eba76e1504c236290bbc9
ToppCellRV-02._Fibroblast_II|RV / Chamber and Cluster_Paper

COL4A1 COL8A1 ADGRB3 NLGN4X PTPRS

1.25e-04194111511c79a8c56ece42713b04b321982e41e239f07a5
ToppCellLV-02._Fibroblast_II|LV / Chamber and Cluster_Paper

COL4A1 COL8A1 ZBTB16 ADGRB3 NLGN4X

1.25e-041941115014d2feb5db2a6a35ef759761a41e466e108c3c1
ToppCell10x_3'_v2v3-Non-neoplastic-Lymphoid-CD4/CD8-CD8_cytotoxic-C|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

KDM5A STK26 KDM5D ACAD11 TSPYL4

1.28e-04195111583c125223e7ca0f08a31414b3a16347912564765
ToppCellE17.5-Mesenchymal-myocytic_cell-aortic_smooth_muscle_cell|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.28e-0419511151daddd801bd4596fffbdb822fc326d5127c96004
ToppCellE17.5-Mesenchymal-myocytic_cell|E17.5 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.28e-04195111501a750d660993017af00736215cbcff2de5909c1
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KDM5D FAM120A ZFR ASCC3 PCM1

1.28e-0419511153e519cffa6144a62b06124642a14c9ff39b76554
ToppCellFibroblast-B_(Myofibroblast)|World / shred on cell class and cell subclass (v4)

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.28e-041951115a8d6416518f226e1ec2d6bdc9d4b90cef5cb1365
ToppCellE18.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.28e-0419511152414b158dc7bdec43a9671544bfb7ffc5f5168fd
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

KDM5D FAM120A ZFR ASCC3 PCM1

1.28e-0419511157796ea9247f4c63762f0de8490fed08b9717fa23
ToppCellMatrixFB-Fibroblast-B_(Myofibroblast)|MatrixFB / shred on cell class and cell subclass (v4)

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.31e-04196111538ea0eaf42f95c321ca23570d0d7752980cf00f8
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Slc17a7.Cplx3_(Cortical_subplate)--|Striatum / BrainAtlas - Mouse McCarroll V32

SATB2 SLC38A4 ROR2 MST1R

1.33e-0410411147642c6ac1a51b431a8d48d35520930c072a3710e
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Slc17a7.Cplx3_(Cortical_subplate)|Striatum / BrainAtlas - Mouse McCarroll V32

SATB2 SLC38A4 ROR2 MST1R

1.33e-04104111459e982b521610af0532c63b2caf934fa65644b0b
ToppCellStriatum-Neuronal-Excitatory-eN3(Slc17a7_Gad1Gad2)-Excitatory_Neuron.Slc17a7.Cplx3_(Cortical_subplate)-|Striatum / BrainAtlas - Mouse McCarroll V32

SATB2 SLC38A4 ROR2 MST1R

1.33e-041041114016704f1d1c43e6d4067ad1d81c22cc660e605d0
ToppCellfacs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l34|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SOX6 COL8A1 TSC22D1 WIF1 SAMD4A

1.35e-0419711156e111ba16fc8adde782b3f7da250248cddf11228
ToppCelldroplet-Trachea-nan-3m-Mesenchymal-chondrocyte|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL8A1 NRBF2 TSC22D1 WIF1 SAMD4A

1.35e-0419711158786125b669d5d0b15e12df0ade6b319f09f7333
ToppCellfacs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SOX6 COL8A1 TSC22D1 WIF1 SAMD4A

1.35e-0419711154b6c0e028b9669c102df8e9dc63e284f8d5fd9ee
ToppCellfacs-Trachea-3m-Mesenchymal-myofibroblast-tracheobronchial_smooth_muscle_cell-smooth_muscle_cell_of_trachea_l1|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

KIAA0408 COL8A1 TSC22D1 PTPRS WIF1

1.35e-0419711153fe665c0277d091290b63f0dd24c0c6536a45309
ToppCellPND03-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.35e-0419711159d7a1c7dc70ba5e35645f19f9e056e4fa2494aa0
ToppCellfacs-Trachea-3m-Mesenchymal-myofibroblast|3m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

SOX6 COL8A1 TSC22D1 WIF1 SAMD4A

1.35e-041971115ece0c17eb68f394b20e588c0b0626d3987a4dbbb
ToppCell10x_3'_v3-tissue-resident_(10x_3'_v3)-myeloid-myeloid_monocytic-monocyte|tissue-resident_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

SOX6 COL8A1 ZNF536 ADGRB3 NLGN4X

1.35e-041971115b2f4d7c301c0b24003374923b31d6d058e40b213
ToppCellPND03-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway-SCMF|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF536 SLC38A4 ADGRG2 WIF1 SAMD4A

1.35e-041971115090a251194da3e2806989d9a522588f83f52da7f
ToppCellE16.5-Mesenchymal-Mesenchymal_myocytic|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

COL4A1 TSC22D1 ADGRG2 WIF1 SAMD4A

1.35e-041971115e132f4b9deef6a565262c0aa0863cafe28f248e6
ToppCellE16.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.38e-04198111563f7d25201613bd3404c28fb936954190bca91d3
ToppCellE16.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway-ASMC|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.38e-041981115a73534b6ca202c277a70a52281d5b97a3e6cb8ef
ToppCellE16.5-Mesenchymal-Mesenchymal_myocytic-Myofibroblast_airway-ASMC-ASMC_mature|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

ZNF536 TSC22D1 ADGRG2 WIF1 SAMD4A

1.38e-041981115d1e1bdd36c84e1bac21ba137f018defe98456a8c
ToppCell5'-GW_trimst-2-SmallIntestine-Neuronal-Glial_immature|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL8A1 ZNF536 RARB ADGRB3 NLGN4X

1.38e-04198111550dfe6efca76ea9683a19b6bff59cb5030d346f1
ToppCellfacs-Trachea-nan-3m-Mesenchymal-chondrocyte|Trachea / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SOX6 COL8A1 TSC22D1 WIF1 SAMD4A

1.38e-04198111571e847e8c24744d6df4a960348ad2ecf310373b4
ToppCell(10)_Ciliated-(2)_GFP_FOXI1|(10)_Ciliated / shred by cell type by condition

REST FAM120A SMARCA2 ZFR STAG2

1.41e-04199111561b1ed2db71b96157b92b7535d1955a4033098da
ToppCellFetal_brain-fetalBrain_Zhong_nature-GW23|fetalBrain_Zhong_nature / Sample Type, Dataset, Time_group, and Cell type.

ZNF536 ZBTB16 NLGN4Y FAM178B KDM5D

1.41e-041991115f30e9d3d095a1e12d759debe27540aad32861db6
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

REST INO80D FAM120A SMARCA2 STAG2

1.41e-041991115c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-1_mon-Proliferating-Cycling_Progenitors|1_mon / Sample Type, Dataset, Time_group, and Cell type.

COL4A1 ZNF536 STK26 CS FAM120A

1.41e-041991115358c4b3037f59378db8916a2fbe9ed4830cf1449
ToppCellNeuronal-Inhibitory-iB-iB_2(PVALB)|Neuronal / cells hierarchy compared to all cells using T-Statistic

SOX6 ZNF536 MEPE NACC2 WIF1

1.44e-0420011151276bfa911fddada4235e12e3081baa53164574b
ToppCellBronchial-NucSeq-Stromal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

COL4A1 ROR2 ADGRB3 PTPRS SAMD4A

1.44e-042001115389cc775c8419d90fb77cd794376d2160a7bf44e
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW23|organoid_Tanaka_cellReport / Sample Type, Dataset, Time_group, and Cell type.

ZNF536 ZBTB16 NLGN4Y FAM178B KDM5D

1.44e-042001115e16bde12326f0cfc4d03f9307cba0e21ea2389cb
ToppCellASK440-Epithelial|ASK440 / Donor, Lineage and Cell class of Lung cells from Dropseq

KIAA0408 IFT57 TSC22D1 WIF1 FGGY

1.44e-042001115cb617e2a0ca82b470b473b8d5906bc8879c85718
DrugAC1L2E0P

NCOA6 ZBTB16 RARB NRBF2 KDM5A CYP11A1 KAT6A SMARCA2 EP300 HDAC2

2.07e-0630710810CID000019390
DrugFenbufen [36330-85-5]; Down 200; 15.8uM; PC3; HT_HG-U133A

KDM5A HIPK1 KAT6A REST NEB SF3B1 ZFR NFAT5

3.64e-0619110884279_DN
Drugtroglitazone; Down 200; 10uM; MCF7; HT_HG-U133A_EA

HIPK1 PRDM4 MAD2L1BP NEO1 NACC2 ZFR PCM1 SAMD4A

4.75e-0619810881070_DN
Diseasesyndromic X-linked intellectual disability Claes-Jensen type (implicated_via_orthology)

KDM5A KDM5C KDM5D

1.75e-0741053DOID:0060809 (implicated_via_orthology)
Diseasealcohol use disorder (implicated_via_orthology)

DRD5 KDM5A KDM5C KDM5D SMARCA2 SMARCC1 EP300 HDAC2

5.08e-071951058DOID:1574 (implicated_via_orthology)
Diseasesyndromic intellectual disability (implicated_via_orthology)

KDM5A KDM5C KDM5D

2.37e-05161053DOID:0050888 (implicated_via_orthology)
Diseaseamyotrophic lateral sclerosis type 15 (implicated_via_orthology)

UBQLN1 UBQLN4

3.75e-0531052DOID:0060206 (implicated_via_orthology)
DiseaseColorectal Carcinoma

ATG5 SATB2 RARB ATP7B NLGN4X ERGIC3 PTPRS WIF1 PAN2 UGT3A2 EP300

4.20e-0570210511C0009402
Diseasepuberty onset measurement

SOX6 NCOA6 ZNF536 ECPAS NFAT5

8.66e-051251055EFO_0005677
Diseaseintellectual disability (implicated_via_orthology)

HIVEP2 KDM5A KDM5C KDM5D

1.52e-04751054DOID:1059 (implicated_via_orthology)
Diseaseautism spectrum disorder (implicated_via_orthology)

KDM5A NLGN4Y KDM5C KDM5D NLGN4X

2.17e-041521055DOID:0060041 (implicated_via_orthology)
DiseaseHeart Failure, Diastolic

COL4A1 COL8A1 MYH6

2.21e-04331053C1135196
DiseaseC-reactive protein measurement

SOX6 NCOA6 ZNF536 RARB SLC38A4 CEP192 TLR10 MST1R PACS1 NEO1 SPATA16 RP1L1 NFAT5

3.56e-04120610513EFO_0004458
Diseaserisk-taking behaviour

ZNF536 RARB TOX UBQLN4 REST NEO1 RP1L1 ASCC3 NFAT5 EP300

4.03e-0476410510EFO_0008579
Diseaseopportunistic bacterial infectious disease (implicated_via_orthology)

SMARCA2 SMARCC1

4.44e-0491052DOID:0050340 (implicated_via_orthology)
Diseasealopecia areata (is_marker_for)

KDM5A HDAC2

5.54e-04101052DOID:986 (is_marker_for)
Diseaseendometrial carcinoma, endometriosis

RARB TLR10

6.76e-04111052EFO_0001065, EFO_1001512
Diseasefrontotemporal dementia (implicated_via_orthology)

UBQLN1 UBQLN4

8.09e-04121052DOID:9255 (implicated_via_orthology)
DiseaseSquamous cell carcinoma

RARB XPC EP300 HDAC2

1.02e-031241054C0007137
Diseaseinsomnia measurement

ZNF536 RARB IFT57 SPATA16 NADK ASCC3 EP300

1.06e-034431057EFO_0007876
Diseasesmoking cessation

SOX6 NRBF2 IFT57 OGDH MST1R NFAT5

1.10e-033251056EFO_0004319
Diseasesuperior frontal gyrus grey matter volume measurement

COL8A1 SMARCA2

1.11e-03141052EFO_0006516
Diseaseresponse to 5-fluorouracil, response to cyclophosphamide, chemotherapy-induced alopecia, response to doxorubicin

BCL9 SMARCA2

1.11e-03141052EFO_0005400, GO_0036275, GO_1902518, GO_1902520
Diseasemood instability measurement

SOX6 HIVEP2 RARB EP300

1.15e-031281054EFO_0008475
DiseaseSjogren syndrome

ATG5 NACC2 NFAT5

1.29e-03601053EFO_0000699
Diseasevital capacity

SOX6 NCOA6 COL8A1 ZBTB16 HIVEP2 RARB NRBF2 SMARCA2 PAN2 NADK NFAT5 SAMD4A

1.49e-03123610512EFO_0004312
Diseasebanks of the superior temporal sulcus volume measurement

TOX SMARCA2

1.65e-03171052EFO_0010286
Diseasenoggin measurement

HIVEP2 SUFU

1.85e-03181052EFO_0021995
DiseaseMyeloid Leukemia

STAG2 HDAC2

1.85e-03181052C0023470
DiseaseLeukemia, Monocytic, Chronic

STAG2 HDAC2

1.85e-03181052C0023466
Diseasemelanoma

XPC TSPYL4 STAG2 EP300 HDAC2

1.97e-032481055C0025202
Diseaseforced expiratory volume

NCOA6 COL8A1 ZBTB16 RARB NRBF2 REST BCL9 SMARCA2 NFAT5

2.04e-037891059EFO_0004314
Diseasemean reticulocyte volume

SOX6 ZBTB16 MARCHF8 REST NEB SPDYE12 NUP205 STAG2 PCM1

2.23e-037991059EFO_0010701
Diseaseprostate cancer (is_marker_for)

KDM5A WIF1 SMARCA2 EP300

2.38e-031561054DOID:10283 (is_marker_for)
Diseasediastolic blood pressure, systolic blood pressure

SOX6 COL4A1 COL8A1 MYH6 BCL9 NFAT5 FGGY PCM1

2.74e-036701058EFO_0006335, EFO_0006336
Diseasesmoking status measurement

ZBTB16 RARB TOX IFT57 ADGRB3 REST INO80D SPATA16 SMARCC1 ASCC3 NFAT5

2.83e-03116010511EFO_0006527
Diseasegeneralized anxiety disorder

SOX6 FAM120A

3.02e-03231052EFO_1001892
Diseaseprostate cancer, disease progression measurement

EBF3 MROH1

3.29e-03241052EFO_0008336, MONDO_0008315

Protein segments in the cluster

PeptideGeneStartEntry
LGPHMQGNLMVPVFI

CATSPERG

866

Q6ZRH7
QIFQRPIQHQMPPMT

EP300

1946

Q09472
MSVAQHGQPLNMAPQ

EP300

2016

Q09472
SKVIIQQPTGLHMPM

ADGRB3

1246

O60242
QQPTGLHMPMSMNEL

ADGRB3

1251

O60242
MLIPSNEPHQSMVLD

ATP7B

671

P35670
MINQVSRLLHSPPDM

ADGRG2

401

Q8IZP9
VMHLANGQTMPVLPG

ATF7

196

P17544
MPIQSHVIMTPQSQS

ATF7

466

P17544
QPLSPEQMLQDQHTM

FAM186B

191

Q8IYM0
TVHMPKVVLNMNLTP

AP3M1

311

Q9Y2T2
NQVMIHGIEPMLETP

ATG5

236

Q9H1Y0
ILPVHSNIPMMDQKA

DHX30

701

Q7L2E3
QHSMILVPMNTPGVK

ACAD11

566

Q709F0
MVMAVHSQTIQIPPC

COL4A1

1556

P02462
MPPLIQEMLENSEGH

RARB

406

P10826
IHMMPNAVTPGNREV

DRD5

411

P21918
IHMSMQMGNEPPISL

NUP205

421

Q92621
THTTFIPLMLNEMPQ

PAN2

956

Q504Q3
EPAQMVGAQIVLAHM

REST

671

Q13127
PPLMGTVVMAQGHRN

MAD2L1BP

206

Q15013
LIRNNMQHIMGPVTA

MEPE

146

Q9NQ76
HNSVQPTAMIPEAMG

HIPK1

771

Q86Z02
MNPNTLMSHGVPVVR

KDM5D

561

Q9BY66
MEGKPQPQQDSLMHL

ECPAS

126

Q5VYK3
AGASMIHPNVPAIMI

NADK

331

O95544
VMPSNVASPQVHFIM

PCM1

1041

Q15154
PLDHTNVTAPQASMM

ERGIC3

261

Q9Y282
QEMPNVTNIPHGDPM

KIAA0408

201

Q6ZU52
MSMPLHQISAIPSQD

MARCHF8

1

Q5T0T0
AMLNPANVPTHLMVL

FAM120A

701

Q9NZB2
NMTPQGLQIMIEHLS

MROH1

911

Q8NDA8
QMQPPMFHSQSTIAV

NFAT5

1111

O94916
LVTIMNPNVLMEHGV

KDM5A

536

P29375
MEVMEGPLNLAHQQS

NRBF2

1

Q96F24
INMAEVMQHPNEGAL

PACS1

216

Q6VY07
PMSHEIMPGGNVNIT

PTPRS

251

Q13332
HPMQPVSVNRQMNPA

NCOA6

241

Q14686
TNMVPPHVQAMQGNS

NCOA6

826

Q14686
RPLQQMPPQLMQHVA

NCOA6

981

Q14686
PSHVVLPQNQLMMTG

NCOA6

1151

Q14686
PMMDVPSVSDHSQQV

KAT6A

1531

Q92794
LQQLTNTIMDPHAMP

KAT6A

1756

Q92794
MIPNTLMGMQPLHTF

NLGN4Y

781

Q8NFZ3
NGHNEMDEPMFTQPL

OGDH

511

Q02218
HVAAMNIPIPFNLVM

UPF1

986

Q92900
NMTRNMHATVIPEPA

IFT57

411

Q9NWB7
GHVMMLTTPEEPQSI

FBXO9

306

Q9UK97
NPLFVQMHADITGMP

FGGY

461

Q96C11
QMHADITGMPVVLSQ

FGGY

466

Q96C11
NPLKSPTMHQVQSPM

BCL9

861

O00512
VVTMLDNFPTNLHPM

CS

151

O75390
LHQGVMSPPQGLMTQ

BCL9L

1416

Q86UU0
QQVPHMPLAKDGLAM

COL8A1

56

P27658
HQAQGDMATMLQLVP

CYP11A1

361

P05108
FHVSQGPNVMIMQPT

DUXB

226

A0A1W2PPF3
VVAHMMPDLPNVGLE

ELP3

281

Q9H9T3
VTRLAGPSVVNHMMP

CEP192

1566

Q8TEP8
HNQEQPTTLSMPLLM

ENO4

266

A6NNW6
SAEMPIMAQHLLPTQ

INO80D

861

Q53TQ3
MSNIMQSIANSLPPH

EMSY

241

Q7Z589
QIPTLGNNPAHTGMM

EBF3

421

Q9H4W6
LRMLPHAPGVQMQAI

HDAC2

371

Q92769
MIPNTLTGMQPLHTF

NLGN4X

781

Q8N0W4
PMHGNGLELPVVMET

PRDM4

256

Q9UKN5
MAAVGPPQQQVRMAH

RNF139

1

Q8WU17
PQAQVMVHMANPRQP

SUSD3

221

Q96L08
LANMVQVIRQMHPTP

TRIM41

201

Q8WV44
PQEGMHQMHKPIDGI

SMARCA2

66

P51531
LTISNAQMPHMLFPN

TLR10

331

Q9BXR5
MVPAPQHVTELELGM

TMEM132A

836

Q24JP5
MAHSPVAVQVPGMQN

STK26

1

Q9P289
SMPPHSTMLQQEGAV

OPLAH

866

O14841
QMSHGLQMAGPQETV

FAM178B

26

Q8IXR5
NPMVIMVTGNHRKPS

KIR3DS1

111

Q14943
SHPGEMQVTIQNLMP

NEO1

491

Q92859
QVPSHPDMSQPGMSQ

SATL1

206

Q86VE3
CVLGQRPMHLPNMNQ

SATB2

246

Q9UPW6
GKIMMSHQPQPQEER

SPDYE10

6

P0DUX0
GKIMMSHQPQPQEER

SPDYE11

6

P0DTA3
GKIMMSHQPQPQEER

SPDYE8

6

P0DUD1
MSTLAHPPNILEMSQ

SPATA16

31

Q9BXB7
ASPSQDMEMPLINQH

ROR2

446

Q01974
QQQPMVSTQMAPGHV

TSC22D1

631

Q15714
LSFNNTLPMHVVMLP

SLC38A4

261

Q969I6
TLPMHVVMLPNNSES

SLC38A4

266

Q969I6
KAPGVMDNPLVMHQL

MYH6

681

P13533
GQHMPGRMIPTVAAN

SMARCC1

1026

Q92922
QQIQVQGHMPPLMIP

SOX6

256

P35712
EGSMKDHPQQQPGML

TMEM263

21

Q8WUH6
VHQIPSVMMEASIQP

ASCC3

1176

Q8N3C0
VVTGMRNHPMNLPVQ

ZYG11B

366

Q9C0D3
MGMIQLQNPSHPTGL

ZBTB16

6

Q05516
PGATMMGQEHTQAQP

RP1L1

1481

Q8IWN7
REQTLHTPVMMQTPQ

STAG2

1106

Q8N3U4
TPGHIMSMTPEQLQA

SF3B1

371

O75533
GKIMMSHQPQPQEEQ

SPDYE12

6

P0DUX1
GKIMMSHQPQPQEER

SPDYE13

6

A0A494C0Z2
GKIMMSHQPQPQEER

SPDYE14

6

P0DUD3
GKIMMSHQPQPQEER

SPDYE15

6

P0DUD4
GKIMMSHQPQPQEER

SPDYE17

6

P0DUD2
RMLHPATQQSPFMVD

RNF44

81

Q7L0R7
RNPEISHMLNNPDIM

UBQLN1

221

Q9UMX0
HMLLTEDPQMQPVQT

SUFU

176

Q9UMX1
HPQLSPMISGQDEDM

TSPYL4

261

Q9UJ04
QAQAPVAAVLLMHMP

TBC1D10B

446

Q4KMP7
RVQGMQPLLLMQAPH

TEX13C

216

A0A0J9YWL9
EVHTPSVVLEMGMPN

VWA5A

236

O00534
RMPAIPVNIHSMNFT

WIF1

76

Q9Y5W5
VPVPMGGMSQEAHAN

ZNF536

411

O15090
IHKVLGMDPLPQMSQ

ZFR

1026

Q96KR1
GMDPLPQMSQRFNIH

ZFR

1031

Q96KR1
GKIMMSHQPQPQEER

SPDYE9

6

A0A494C191
GQNSIMEAIQHGVPM

UGT3A2

371

Q3SY77
MMPIGCVQLNLPNLH

XPC

766

Q01831
PQIMHMDSQESLRNP

HIVEP2

1156

P31629
RNPEISHMLNNPELM

UBQLN4

231

Q9NRR5
MNLGPSTSHEMNVRP

MST1R

1361

Q04912
DIRQQPGMMPHGQLT

TOX

166

O94900
PGMMPHGQLTTINQS

TOX

171

O94900
LPVHTSPQNMLMFQQ

SAMD4A

666

Q9UPU9
MHLESPALQVMGPAQ

ZNF449

141

Q6P9G9
MNPNTLMSHGVPVVR

KDM5C

571

P41229
PPGTHGTNQQVAMQM

KIAA1958

296

Q8N8K9
MSQMLHIEIPNFGNT

NACC2

1

Q96BF6
LSPMHPNSVQGVDDM

MYO7B

56

Q6PIF6
HIMPDTPEIMLARQN

NEB

3221

P20929