Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionDNA-binding transcription factor activity, RNA polymerase II-specific

ZNF140 ARNT ZNF35 FEZF1 ZNF460 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529 NR1H4

1.77e-0414127415GO:0000981
GeneOntologyMolecularFunctionRNA polymerase II transcription regulatory region sequence-specific DNA binding

ZNF140 ARNT ZNF35 FEZF1 ZNF460 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529 NR1H4

2.53e-0414597415GO:0000977
DomainZINC_FINGER_C2H2_2

ZNF140 ZNF35 FEZF1 ZNF460 HELZ2 AEBP2 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529

2.07e-077757215PS50157
DomainZINC_FINGER_C2H2_1

ZNF140 ZNF35 FEZF1 ZNF460 HELZ2 AEBP2 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529

2.14e-077777215PS00028
DomainZnf_C2H2-like

ZNF140 ZNF35 FEZF1 ZNF460 HELZ2 AEBP2 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529

2.91e-077967215IPR015880
DomainZnf_C2H2/integrase_DNA-bd

ZNF140 ZNF35 FEZF1 ZNF460 AEBP2 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529

3.41e-076947214IPR013087
DomainZnF_C2H2

ZNF140 ZNF35 FEZF1 ZNF460 HELZ2 AEBP2 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529

3.53e-078087215SM00355
Domain-

ZNF140 ZNF35 FEZF1 ZNF460 AEBP2 ZNF324 ZNF621 ZNF350 ZNF619 ZFP69B BCL6 SNAI3 ZNF529

1.70e-0667972133.30.160.60
DomainZnf_C2H2

ZNF140 ZNF35 FEZF1 ZNF460 AEBP2 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529

1.99e-068057214IPR007087
Domainzf-C2H2

ZNF140 ZNF35 FEZF1 ZNF460 ZNF324 ZNF621 ZNF350 ZNF619 ZFP69B BCL6 SNAI3 ZNF529

1.23e-056937212PF00096
DomainTOM1

TOM1L2 TOM1

4.39e-053722IPR014645
Domain-

TOM1L2 TOM1

2.18e-0467221.20.58.160
DomainGAT

TOM1L2 TOM1

2.18e-046722PS50909
DomainGAT_dom

TOM1L2 TOM1

2.18e-046722IPR004152
DomainGAT

TOM1L2 TOM1

2.18e-046722PF03127
DomainDUF3585

MICALL1 MICAL1

3.04e-047722IPR022735
DomainDUF3585

MICALL1 MICAL1

3.04e-047722PF12130
DomainKRAB

ZNF140 ZNF460 ZNF324 ZNF621 ZNF350 ZFP69B ZNF529

4.53e-04358727PS50805
DomainKRAB

ZNF140 ZNF460 ZNF324 ZNF621 ZNF350 ZFP69B ZNF529

4.53e-04358727PF01352
DomainVHS

TOM1L2 TOM1

5.18e-049722PF00790
DomainVHS

TOM1L2 TOM1

5.18e-049722PS50179
DomainVHS

TOM1L2 TOM1

5.18e-049722SM00288
DomainVHS_dom

TOM1L2 TOM1

5.18e-049722IPR002014
DomainKRAB

ZNF140 ZNF460 ZNF324 ZNF621 ZNF350 ZFP69B ZNF529

5.43e-04369727SM00349
DomainKRAB

ZNF140 ZNF460 ZNF324 ZNF621 ZNF350 ZFP69B ZNF529

5.52e-04370727IPR001909
Domainzf-C2H2_6

ZNF140 FEZF1 ZNF324 ZNF621 ZNF619 ZFP69B

1.33e-03314726PF13912
DomainG-protein_beta_WD-40_rep

DAW1 WDR86 TAF5

4.33e-0385723IPR020472
Domain-

TOM1L2 TOM1

4.49e-03267221.25.40.90
DomainCys-rich_flank_reg_C

NTRK2 ADGRA2 ADGRA3

5.08e-0390723IPR000483
DomainLRRCT

NTRK2 ADGRA2 ADGRA3

5.08e-0390723SM00082
DomainHRM

ADGRA2 ADGRA3

5.19e-0328722PF02793
DomainENTH_VHS

TOM1L2 TOM1

5.56e-0329722IPR008942
DomainGPS

ADGRA2 ADGRA3

7.59e-0334722SM00303
DomainGPS

ADGRA2 ADGRA3

8.03e-0335722PF01825
DomainGPS

ADGRA2 ADGRA3

8.48e-0336722PS50221
DomainGPS

ADGRA2 ADGRA3

8.95e-0337722IPR000203
Pubmed

Genetic susceptibility to distinct bladder cancer subphenotypes.

NAT1 ARNT LMOD1 ZNF350 BCL6 XRCC5 NR1H4 CDK4

3.24e-0642174819692168
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

MICALL1 PIKFYVE ABCA2 ARHGEF40 CLTCL1 SZT2 INTS1 HELZ2 CLASP2 SRGAP2 ADGRA2 BAHD1

3.56e-061105741235748872
Pubmed

Analysis of BCL6-interacting proteins by tandem mass spectrometry.

PIKFYVE HELZ2 BCL6 DDX6

9.59e-066274416147992
Pubmed

BCL6--regulated by AhR/ARNT and wild-type MEF2B--drives expression of germinal center markers MYBL1 and LMO2.

ARNT BCL6

1.34e-05374225769544
Pubmed

Autophagy receptors link myosin VI to autophagosomes to mediate Tom1-dependent autophagosome maturation and fusion with the lysosome.

TOM1L2 TOM1

1.34e-05374223023224
Pubmed

Direct binding of the human homologue of the Drosophila disc large tumor suppressor gene to seven-pass transmembrane proteins, tumor endothelial marker 5 (TEM5), and a novel TEM5-like protein.

ADGRA2 ADGRA3

1.34e-05374215021905
Pubmed

PTEN identified as important risk factor of chronic obstructive pulmonary disease.

ARNT LMOD1 ZNF350 BCL6 XRCC5 NR1H4 CDK4

1.52e-0537474719625176
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

MICALL1 IFT140 ABCA2 SZT2 ANKRD50 ADGRA2 BAHD1 STAB1

1.70e-0552974814621295
Pubmed

Pathway-based evaluation of 380 candidate genes and lung cancer susceptibility suggests the importance of the cell cycle pathway.

ARNT LMOD1 ZNF350 BCL6 XRCC5 NR1H4 CDK4

1.72e-0538174718676680
Pubmed

Polymorphisms in innate immunity genes and lung cancer risk in Xuanwei, China.

ARNT LMOD1 ZNF350 BCL6 XRCC5 NR1H4 CDK4

1.75e-0538274719170196
Pubmed

Systematic mapping of genetic interactions for de novo fatty acid synthesis identifies C12orf49 as a regulator of lipid metabolism.

ASNSD1 PTCHD1 ARNT UBR5 SZT2 RECQL5 INTS1 AEBP2 CLASP2 BAHD1 DDX6 CDK4

2.23e-051327741232694731
Pubmed

Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA.

TFB2M PNP

2.67e-05474212068295
Pubmed

Tollip coordinates Parkin-dependent trafficking of mitochondrial-derived vesicles.

TOM1L2 TOM1

2.67e-05474232311122
Pubmed

MICALs, a family of conserved flavoprotein oxidoreductases, function in plexin-mediated axonal repulsion.

MICALL1 MICAL1

4.45e-05574212110185
Pubmed

Recruitment of clathrin onto endosomes by the Tom1-Tollip complex.

TOM1L2 TOM1

4.45e-05574216412388
Pubmed

The interaction of JRAB/MICAL-L2 with Rab8 and Rab13 coordinates the assembly of tight junctions and adherens junctions.

MICALL1 MICAL1

4.45e-05574218094055
Pubmed

Ku proteins function as corepressors to regulate farnesoid X receptor-mediated gene expression.

XRCC5 NR1H4

4.45e-05574219833092
Pubmed

MICAL-1 isoforms, novel rab1 interacting proteins.

MICALL1 MICAL1

4.45e-05574212788069
Pubmed

Expression pattern of LRR and Ig domain-containing protein (LRRIG protein) in the early mouse embryo.

NTRK2 ADGRA2 ADGRA3

5.28e-053474318848646
Pubmed

A peptide aptamer to antagonize BCL-6 function.

BCL6 CDK4

6.66e-05674216331266
Pubmed

There exist at least 30 human G-protein-coupled receptors with long Ser/Thr-rich N-termini.

ADGRA2 ADGRA3

9.31e-05774212565841
Pubmed

The ancestral ESCRT protein TOM1L2 selects ubiquitinated cargoes for retrieval from cilia.

TOM1L2 TOM1

9.31e-05774237019113
Pubmed

HIF-1 Interacts with TRIM28 and DNA-PK to release paused RNA polymerase II and activate target gene transcription in response to hypoxia.

ARNT XRCC5

1.24e-04874235031618
Pubmed

MRE11 complex links RECQ5 helicase to sites of DNA damage.

UBR5 RECQL5

2.43e-041174219270065
Pubmed

Periostin is required for maturation and extracellular matrix stabilization of noncardiomyocyte lineages of the heart.

ACAN STAB1

2.91e-041274218296617
Pubmed

EHBP1L1 coordinates Rab8 and Bin1 to regulate apical-directed transport in polarized epithelial cells.

MICALL1 MICAL1

3.43e-041374226833786
Pubmed

Glycogen synthase kinase 3 β-dependent Snail degradation directs hepatocyte proliferation in normal liver regeneration.

NR1H4 CDK4

5.26e-041674221690373
Pubmed

Meta-analysis of genome-wide association studies in celiac disease and rheumatoid arthritis identifies fourteen non-HLA shared loci.

DDX6 CDK4

5.95e-041774221383967
Pubmed

Acetylation-Mimic Mutation of TRIM28-Lys304 to Gln Attenuates the Interaction with KRAB-Zinc-Finger Proteins and Affects Gene Expression in Leukemic K562 Cells.

ZNF140 ZNF460 ZNF324 ZNF529

6.15e-0418174437372979
Pubmed

Role of Ostm1 Cytosolic Complex with Kinesin 5B in Intracellular Dispersion and Trafficking.

ARNT UBR5

6.68e-041874226598607
Pubmed

Defining the membrane proteome of NK cells.

ABCA2 CLTCL1 UBR5 INTS1 HELZ2 CLASP2 NUF2 XRCC5 DDX6

8.22e-04116874919946888
Pubmed

Transcriptional regulation of endochondral ossification by HIF-2alpha during skeletal growth and osteoarthritis development.

ARNT ACAN

8.28e-042074220495570
Pubmed

Identification of substrates of SMURF1 ubiquitin ligase activity utilizing protein microarrays.

TOM1L2 TOM1 ANKRD50

8.62e-048774320804422
Pubmed

HES1 is a novel downstream modifier of the SHH-GLI3 Axis in the development of preaxial polydactyly.

ACAN CDK4

9.14e-042174234928956
Pubmed

A Large-scale genetic association study of esophageal adenocarcinoma risk.

ARNT ACCS BCL6 XRCC5 CDK4

9.27e-0435174520453000
Pubmed

Comparison of substrate specificity of the ubiquitin ligases Nedd4 and Nedd4-2 using proteome arrays.

TOM1L2 ACAN NTRK2 TOM1

9.42e-0420374419953087
Pubmed

Shotgun sequencing of the human transcriptome with ORF expressed sequence tags.

CLTCL1 SZT2 NTRK2 HELZ2 DDX6 STAB1

1.16e-0355274610737800
Pubmed

The RNA-mediated estrogen receptor α interactome of hormone-dependent human breast cancer cell nuclei.

EEFSEC RECQL5 TOM1 INTS1 HELZ2 CLASP2 SRGAP2 TFB2M TAF5 DDX6

1.24e-031497741031527615
Pubmed

Global genetic analysis in mice unveils central role for cilia in congenital heart disease.

IFT140 DAW1 ACAN

1.29e-0310074325807483
Pubmed

C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.

PPP3CB UBR5 TOM1 INTS1 TFB2M XRCC5 DDX6 CDK4 PNP

1.37e-03125774937317656
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

UBR5 HELZ2 ADGRA2 STAB1

1.38e-0322574412168954
Pubmed

Identification of motif-based interactions between SARS-CoV-2 protein domains and human peptide ligands pinpoint antiviral targets.

PIKFYVE DNAH3 FEZF1 ZNF529

1.56e-0323374437704626
Pubmed

The human and mouse repertoire of the adhesion family of G-protein-coupled receptors.

ADGRA2 ADGRA3

1.75e-032974215203201
Pubmed

Analysis of lipid pathway genes indicates association of sequence variation near SREBF1/TOM1L2/ATPAF2 with dementia risk.

TOM1L2 ABCA2

1.75e-032974220167577
Pubmed

Maintenance of silent chromatin through replication requires SWI/SNF-like chromatin remodeler SMARCAD1.

ZNF460 ZNF324 XRCC5

1.97e-0311674321549307
Pubmed

Identification of interaction partners for individual SH3 domains of Fas ligand associated members of the PCH protein family in T lymphocytes.

MICALL1 SRGAP2

2.00e-033174219041431
Pubmed

Pooled-matrix protein interaction screens using Barcode Fusion Genetics.

ARNT BCL6 ZNF529 DDX6 CDK4

2.02e-0341974527107012
Pubmed

Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.

TOM1L2 PPP3CB UBE2Q1 AEBP2 CLASP2 SRGAP2 TFB2M ANKRD50

2.12e-03108474811544199
Cytoband1p34.2

SZT2 ZFP69B ZMYM6

1.06e-04577331p34.2
GeneFamilyZinc fingers C2H2-type|ZF class homeoboxes and pseudogenes

ZNF140 ZNF35 FEZF1 ZNF460 ZNF324 ZNF621 ZNF350 ZNF518B ZNF619 ZFP69B BCL6 SNAI3 ZNF529

3.84e-08718491328
GeneFamilyImmunoglobulin like domain containing|Adhesion G protein-coupled receptors, subfamily A

ADGRA2 ADGRA3

2.15e-053492911
CoexpressionGSE24574_BCL6_LOW_TFH_VS_NAIVE_CD4_TCELL_DN

TOM1L2 ZNF460 ZFP69B BCL6 DDX6 STAB1

1.87e-05197736M8339
CoexpressionGSE17721_POLYIC_VS_CPG_16H_BMDC_DN

ASNSD1 PIKFYVE PPP3CB NUF2 TFB2M CDK4

2.04e-05200736M3951
DrugClorgyline hydrochloride [17780-75-5]; Down 200; 13uM; MCF7; HT_HG-U133A

MICALL1 ARNT RECQL5 TOM1 INTS1 ZNF324 ZNF350

3.17e-061967375005_DN
Disease4-hydroxyphenylacetylglutamine measurement

DNAH3 ACSM3

1.71e-053712EFO_0800688
DiseaseX-17676 measurement

DNAH3 ACSM3

1.58e-048712EFO_0800785
Diseaseprogression free survival, urinary bladder cancer

IFT140 AEBP2

3.71e-0412712EFO_0004920, MONDO_0001187
Diseaseadverse effect, response to xenobiotic stimulus

ABCA2 BCL6 ADARB2

3.94e-0459713EFO_0009658, GO_0009410
Diseasebeta-hydroxyisovalerate measurement

ACSM3 THEM5

5.10e-0414712EFO_0800125
Diseasemonocyte count

TOM1L2 PCED1A EEFSEC NEURL3 GALM UBE2Q1 SZT2 THEM5 NUF2 BCL6

1.19e-0313207110EFO_0005091
Diseaselymphoma

BCL6 DDX6

1.52e-0324712EFO_0000574
Diseaseurinary uromodulin measurement

DNAH3 ACSM3 GRAMD1C

1.63e-0396713EFO_0005663
Diseaseneuroblastoma

ARHGEF40 SERPINB8 NUF2

2.79e-03116713EFO_0000621
DiseaseGlobal developmental delay

SZT2 INTS1 DDX6

4.09e-03133713C0557874
Diseasesevere acute respiratory syndrome, COVID-19

MICALL1 NTRK2 AEBP2 SRGAP2 ADARB2

4.48e-03447715EFO_0000694, MONDO_0100096
Diseaseautistic disorder (is_implicated_in)

PTCHD1 NTRK2

4.62e-0342712DOID:12849 (is_implicated_in)

Protein segments in the cluster

PeptideGeneStartEntry
VHCLVGFTLTHRRFN

NAT1

231

P18440
RHNIEGIFTFVDHRC

ARNT

366

P27540
EHRNRVFHDFRNGLC

DDX6

371

P26196
IRHRAICFNLSAHIE

AEBP2

406

Q6ZN18
HGRLFINRIFHISAD

GRAMD1C

326

Q8IYS0
FHRTHFLRELQGCAT

ARHGEF40

1136

Q8TER5
FRFVFSDQVHRLCLG

ACCS

456

Q96QU6
LGLFVFTHHCARRRD

ADGRA2

1061

Q96PE1
LSFSAFFVVHHCVNR

ADGRA3

1036

Q8IWK6
RGLHRQALAFHFCKA

ANKRD50

101

Q9ULJ7
IHRQFFSNCTVDRVH

RAMP3

96

O60896
CHAEVVARRAFLHFL

ADARB2

431

Q9NS39
CLLGRLTELRTFNHH

NR1H4

446

Q96RI1
CQEHAAVLLHRAFLV

INTS1

2151

Q8N201
TLTELRFHNQRHICG

LMOD1

416

P29536
LSGIINFIHFREACR

NUF2

121

Q9BZD4
VRQFCSGSGHHLVRF

PCED1A

96

Q9H1Q7
HTFRGHTAEIVCLSF

DAW1

171

Q8N136
FRDGLAFCAILHRHR

MICALL1

31

Q8N3F8
VLERLCVNGHFFHRS

MICAL1

706

Q8TDZ2
LSRHHAFCFRGISAV

ACAN

666

P16112
AIAHTANTFRLHFCG

OR9G4

171

Q8NGQ1
LFLCRHSSHRGVFLS

PORCN

86

Q9H237
HIRRFVHGQGCVQII

PIKFYVE

1281

Q9Y2I7
FCARVHHAASGRVLE

GALM

256

Q96C23
HHFGVRHRFCTQTLG

GUCD1

76

Q96NT3
LFGLCFFHAVVQERR

DNAH3

3671

Q8TD57
RGLDFLHANCIVHRD

CDK4

126

P11802
VRQFHGLLVKRFHCA

ABCA2

1436

Q9BZC7
VFLCRHVYDFRHGRI

BAHD1

761

Q8TBE0
TCGARFVQVAHLRAH

BCL6

606

P41182
QCLFSAHVLHLRGVL

ASNSD1

46

Q9NWL6
CLQGFVGREVLSFHR

CXorf38

31

Q8TB03
QVQRSHCGHFLEVAR

HELZ2

1861

Q9BYK8
STLFLLRGNHECRHL

PPP3CB

151

P16298
HKFVICRLDQHIFSG

SDIM1

116

Q6ZPB5
ARDHFSLVRIHCFQG

IFT140

981

Q96RY7
IVARHCGLRVFGFSL

PNP

226

P00491
QVLVRFRHHNVYCSL

RTL1

751

A6NKG5
SRVCVHCHRNLGLIF

SYTL5

61

Q8TDW5
RIFAGHLADVNCTRF

TAF5

621

Q15542
FLHLTCSVRLRGQHS

SZT2

1566

Q5T011
LHRGLRTCFSRLGHF

PTCHD1

6

Q96NR3
GFRQASTLCRHKIIH

FEZF1

296

A0PJY2
FHLLKHCFGRRSATV

TFB2M

321

Q9H5Q4
FIRHHKTNCILFCGR

SERPINB8

356

P50452
RQLHCHLQVGRVFTC

SNAI3

171

Q3KNW1
RHAKCFQRLAIFGSV

ACSM3

11

Q53FZ2
FRFAQLCGLHIVIHA

CLTCL1

1266

P53675
SGCAAIRFIIRHTHV

CLASP2

196

O75122
HFVHRDLATRNCLVG

NTRK2

671

Q16620
LIRHFFHGRARCESE

RECQL5

966

O94762
GKAFSCFSHLIVHQR

ZNF35

396

P13682
DIHTNTCRLAFHGIL

EEFSEC

436

P57772
AFCRTTNLIRHFSIH

ZNF460

456

Q14592
CGRAFRERPALFHHQ

ZNF324

486

O75467
MIRRCFQVAARLGHH

THEM5

1

Q8N1Q8
CGHRFHVLVASQDFV

TOM1

81

O60784
CIRFISRHGLQHEGI

SRGAP2

511

O75044
RAHRQLVFRYHVVGC

STAB1

1636

Q9NY15
CIAHRRTTFHDGIVF

NEURL3

36

Q96EH8
GFIQKTCLIAHQRFH

ZNF350

326

Q9GZX5
AFGCRSLFIVHQRIH

ZNF621

271

Q6ZSS3
AFTHCFIHRERLVAE

ZMYM6

1006

O95789
CGKAFFQIRHLRQHE

ZFP69B

396

Q9UJL9
CGKAFRRFSHLTRHQ

ZNF140

306

P52738
FCGKSFRVHAQLTRH

ZNF529

286

Q6P280
CGHRFHILVANRDFI

TOM1L2

81

Q6ZVM7
FRGHTFIINCIQVHG

WDR86

311

Q86TI4
ERHVHRLECNGVIFT

ZNF619

61

Q8N2I2
RFQRLFQCLLHRALH

XRCC5

486

P13010
FISHRCDGNRNILHA

UBR5

911

O95071
IFHRGHERFRIASAC

UBE2Q1

51

Q7Z7E8
CQLGIRRHHVRLTYQ

ZNF518B

981

Q9C0D4