Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	ribonucleoside triphosphate phosphatase activity	MYH3 DNAH3 MYH8 ABCA1 RABL2B RABL2A SEPTIN4 LRRK2 DDX56 FANCM	2.21e-05	775	51	10	GO:0017111
GeneOntologyMolecularFunction	pyrophosphatase activity	MYH3 DNAH3 MYH8 ABCA1 RABL2B RABL2A SEPTIN4 LRRK2 DDX56 FANCM	4.34e-05	839	51	10	GO:0016462
GeneOntologyMolecularFunction	hydrolase activity, acting on acid anhydrides	MYH3 DNAH3 MYH8 ABCA1 RABL2B RABL2A SEPTIN4 LRRK2 DDX56 FANCM	4.38e-05	840	51	10	GO:0016817
GeneOntologyMolecularFunction	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	MYH3 DNAH3 MYH8 ABCA1 RABL2B RABL2A SEPTIN4 LRRK2 DDX56 FANCM	4.38e-05	840	51	10	GO:0016818
GeneOntologyMolecularFunction	phosphoprotein phosphatase activity	MYH3 MYH8 PTPRA PTPN21 PTPRU	1.19e-04	189	51	5	GO:0004721
GeneOntologyMolecularFunction	poly(A) RNA polymerase activity	TENT5C TENT5D	4.15e-04	12	51	2	GO:1990817
GeneOntologyMolecularFunction	phosphatase activity	MYH3 MYH8 PTPRA PTPN21 PTPRU	8.10e-04	287	51	5	GO:0016791
GeneOntologyMolecularFunction	transmembrane receptor protein tyrosine phosphatase activity	PTPRA PTPRU	8.49e-04	17	51	2	GO:0005001
GeneOntologyMolecularFunction	transmembrane receptor protein phosphatase activity	PTPRA PTPRU	8.49e-04	17	51	2	GO:0019198
GeneOntologyMolecularFunction	ATP hydrolysis activity	MYH3 DNAH3 MYH8 ABCA1 DDX56 FANCM	8.71e-04	441	51	6	GO:0016887
GeneOntologyMolecularFunction	ATP-dependent activity	MYD88 MYH3 DNAH3 MYH8 ABCA1 DDX56 FANCM	8.98e-04	614	51	7	GO:0140657
GeneOntologyMolecularFunction	syntaxin binding	VPS18 ABCA1 LRRK2	1.43e-03	87	51	3	GO:0019905
GeneOntologyMolecularFunction	protein tyrosine phosphatase activity	PTPRA PTPN21 PTPRU	2.32e-03	103	51	3	GO:0004725
GeneOntologyMolecularFunction	adenylyltransferase activity	TENT5C TENT5D	2.84e-03	31	51	2	GO:0070566
GeneOntologyMolecularFunction	phosphoric ester hydrolase activity	MYH3 MYH8 PTPRA PTPN21 PTPRU	2.98e-03	386	51	5	GO:0042578
GeneOntologyMolecularFunction	cytoskeletal motor activity	MYH3 DNAH3 MYH8	3.41e-03	118	51	3	GO:0003774
GeneOntologyMolecularFunction	microfilament motor activity	MYH3 MYH8	4.24e-03	38	51	2	GO:0000146
GeneOntologyMolecularFunction	SNARE binding	VPS18 ABCA1 LRRK2	5.07e-03	136	51	3	GO:0000149
GeneOntologyMolecularFunction	guanyl ribonucleotide binding	RABL2B RABL2A SEPTIN4 LRRK2 CHM	5.14e-03	439	51	5	GO:0032561
GeneOntologyMolecularFunction	guanyl nucleotide binding	RABL2B RABL2A SEPTIN4 LRRK2 CHM	5.14e-03	439	51	5	GO:0019001
GeneOntologyCellularComponent	SAGA complex	SUPT20HL1 SUPT20HL2 TRRAP	2.85e-05	25	50	3	GO:0000124
GeneOntologyCellularComponent	SAGA-type complex	SUPT20HL1 SUPT20HL2 TRRAP	1.11e-04	39	50	3	GO:0070461
GeneOntologyCellularComponent	9+2 motile cilium	GSTM3 DNAH3 RABL2B RABL2A SEPTIN4	2.56e-04	238	50	5	GO:0097729
GeneOntologyCellularComponent	Fanconi anaemia nuclear complex	FANCB FANCM	5.77e-04	15	50	2	GO:0043240
GeneOntologyCellularComponent	muscle myosin complex	MYH3 MYH8	6.59e-04	16	50	2	GO:0005859
GeneOntologyCellularComponent	intraciliary transport particle B	RABL2B RABL2A	1.14e-03	21	50	2	GO:0030992
GeneOntologyCellularComponent	histone acetyltransferase complex	SUPT20HL1 SUPT20HL2 TRRAP	1.48e-03	94	50	3	GO:0000123
GeneOntologyCellularComponent	motile cilium	GSTM3 DNAH3 RABL2B RABL2A SEPTIN4	1.55e-03	355	50	5	GO:0031514
GeneOntologyCellularComponent	myosin filament	MYH3 MYH8	1.62e-03	25	50	2	GO:0032982
GeneOntologyCellularComponent	sperm flagellum	GSTM3 RABL2B RABL2A SEPTIN4	1.70e-03	214	50	4	GO:0036126
GeneOntologyCellularComponent	protein acetyltransferase complex	SUPT20HL1 SUPT20HL2 TRRAP	1.98e-03	104	50	3	GO:0031248
GeneOntologyCellularComponent	myosin II complex	MYH3 MYH8	2.04e-03	28	50	2	GO:0016460
GeneOntologyCellularComponent	intraciliary transport particle	RABL2B RABL2A	2.04e-03	28	50	2	GO:0030990
GeneOntologyCellularComponent	pericentriolar material	RABL2B RABL2A	2.04e-03	28	50	2	GO:0000242
GeneOntologyCellularComponent	acetyltransferase complex	SUPT20HL1 SUPT20HL2 TRRAP	2.26e-03	109	50	3	GO:1902493
GeneOntologyCellularComponent	mitochondrial outer membrane	SEPTIN4 VPS13C LRRK2 ARMC1	2.62e-03	241	50	4	GO:0005741
Domain	ARM-type_fold	SMG1 PPP2R5E INF2 LRRK2 HUWE1 TRRAP ARMC1	2.72e-05	339	49	7	IPR016024
Domain	DUF1693	TENT5C TENT5D	4.03e-05	4	49	2	IPR012937
Domain	DUF1693	TENT5C TENT5D	4.03e-05	4	49	2	SM01153
Domain	NTP_transf_7	TENT5C TENT5D	4.03e-05	4	49	2	PF07984
Domain	P-loop_NTPase	MYH3 DNAH3 MYH8 ABCA1 RABL2B RABL2A SEPTIN4 LRRK2 DDX56 FANCM	5.79e-05	848	49	10	IPR027417
Domain	ARM-like	SMG1 PPP2R5E LRRK2 HUWE1 TRRAP ARMC1	7.17e-05	270	49	6	IPR011989
Domain	FAT	SMG1 TRRAP	1.00e-04	6	49	2	PS51189
Domain	FATC	SMG1 TRRAP	1.00e-04	6	49	2	PS51190
Domain	FATC_dom	SMG1 TRRAP	1.00e-04	6	49	2	IPR003152
Domain	PIK_FAT	SMG1 TRRAP	1.00e-04	6	49	2	IPR014009
Domain	FATC	SMG1 TRRAP	1.00e-04	6	49	2	SM01343
Domain	PTPc	PTPRA PTPN21 PTPRU	1.14e-04	36	49	3	SM00194
Domain	TYR_PHOSPHATASE_PTP	PTPRA PTPN21 PTPRU	1.45e-04	39	49	3	PS50055
Domain	PTPase_domain	PTPRA PTPN21 PTPRU	1.69e-04	41	49	3	IPR000242
Domain	Y_phosphatase	PTPRA PTPN21 PTPRU	1.69e-04	41	49	3	PF00102
Domain	PTPc_motif	PTPRA PTPN21 PTPRU	4.98e-04	59	49	3	SM00404
Domain	Tyr_Pase_cat	PTPRA PTPN21 PTPRU	4.98e-04	59	49	3	IPR003595
Domain	-	DNAH3 ABCA1 RABL2B RABL2A SEPTIN4 LRRK2 DDX56 FANCM	6.59e-04	746	49	8	3.40.50.300
Domain	Myosin_N	MYH3 MYH8	6.93e-04	15	49	2	PF02736
Domain	Myosin_N	MYH3 MYH8	6.93e-04	15	49	2	IPR004009
Domain	-	SMG1 TRRAP	7.90e-04	16	49	2	1.10.1070.11
Domain	PI3Kc	SMG1 TRRAP	7.90e-04	16	49	2	SM00146
Domain	Tyr_Pase_AS	PTPRA PTPN21 PTPRU	9.28e-04	73	49	3	IPR016130
Domain	PI3/4_kinase_cat_dom	SMG1 TRRAP	1.00e-03	18	49	2	IPR000403
Domain	Myosin_tail_1	MYH3 MYH8	1.00e-03	18	49	2	PF01576
Domain	Myosin_tail	MYH3 MYH8	1.00e-03	18	49	2	IPR002928
Domain	PI3_PI4_kinase	SMG1 TRRAP	1.00e-03	18	49	2	PF00454
Domain	PI3_4_KINASE_3	SMG1 TRRAP	1.00e-03	18	49	2	PS50290
Domain	PI3_4_KINASE_1	SMG1 TRRAP	1.00e-03	18	49	2	PS00915
Domain	PI3_4_KINASE_2	SMG1 TRRAP	1.00e-03	18	49	2	PS00916
Domain	Myosin-like_IQ_dom	MYH3 MYH8	1.12e-03	19	49	2	IPR027401
Domain	-	MYH3 MYH8	1.12e-03	19	49	2	4.10.270.10
Domain	TYR_PHOSPHATASE_1	PTPRA PTPN21 PTPRU	1.49e-03	86	49	3	PS00383
Domain	TYR_PHOSPHATASE_2	PTPRA PTPN21 PTPRU	1.54e-03	87	49	3	PS50056
Domain	TYR_PHOSPHATASE_dom	PTPRA PTPN21 PTPRU	1.54e-03	87	49	3	IPR000387
Domain	-	PTPRA PTPN21 PTPRU	1.81e-03	92	49	3	3.90.190.10
Domain	Prot-tyrosine_phosphatase-like	PTPRA PTPN21 PTPRU	2.23e-03	99	49	3	IPR029021
Domain	-	PPP2R5E LRRK2 TRRAP ARMC1	2.71e-03	222	49	4	1.25.10.10
Domain	Myosin_head_motor_dom	MYH3 MYH8	4.46e-03	38	49	2	IPR001609
Domain	MYOSIN_MOTOR	MYH3 MYH8	4.46e-03	38	49	2	PS51456
Domain	Myosin_head	MYH3 MYH8	4.46e-03	38	49	2	PF00063
Domain	MYSc	MYH3 MYH8	4.46e-03	38	49	2	SM00242
Pubmed	Loss of miR-17~92 results in dysregulation of Cftr in nephron progenitors.	RABL2B RABL2A AMOTL1	1.99e-06	17	51	3	30838872
Pubmed	RABL2 Is Required for Hepatic Fatty Acid Homeostasis and Its Dysfunction Leads to Steatosis and a Diabetes-Like State.	RABL2B RABL2A	2.11e-06	2	51	2	27732084
Pubmed	Analysis of relative gene dosage and expression differences of the paralogs RABL2A and RABL2B by Pyrosequencing.	RABL2B RABL2A	2.11e-06	2	51	2	20138207
Pubmed	Two novel human RAB genes with near identical sequence each map to a telomere-associated region: the subtelomeric region of 22q13.3 and the ancestral telomere band 2q13.	RABL2B RABL2A	2.11e-06	2	51	2	10444334
Pubmed	Variants in RABL2A causing male infertility and ciliopathy.	RABL2B RABL2A	2.11e-06	2	51	2	33075816
Pubmed	RABL2 positively controls localization of GPCRs in mammalian primary cilia.	RABL2B RABL2A	2.11e-06	2	51	2	30578315
Pubmed	Macrophage ABCA1 reduces MyD88-dependent Toll-like receptor trafficking to lipid rafts by reduction of lipid raft cholesterol.	MYD88 ABCA1	6.32e-06	3	51	2	20650929
Pubmed	The p38-interacting protein (p38IP) regulates G2/M progression by promoting α-tubulin acetylation via inhibiting ubiquitination-induced degradation of the acetyltransferase GCN5.	SUPT20HL1 SUPT20HL2	6.32e-06	3	51	2	24220028
Pubmed	Identification of three developmentally controlled isoforms of human myosin heavy chains.	MYH3 MYH8	6.32e-06	3	51	2	1691980
Pubmed	Increased cellular free cholesterol in macrophage-specific Abca1 knock-out mice enhances pro-inflammatory response of macrophages.	MYD88 ABCA1	6.32e-06	3	51	2	18552351
Pubmed	3' RNA Uridylation in Epitranscriptomics, Gene Regulation, and Disease.	TENT5C TENT5D	6.32e-06	3	51	2	30057901
Pubmed	The human SPT20-containing SAGA complex plays a direct role in the regulation of endoplasmic reticulum stress-induced genes.	SUPT20HL1 SUPT20HL2 TRRAP	9.48e-06	28	51	3	19114550
Pubmed	A TFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing.	SUPT20HL1 SUPT20HL2 TRRAP	1.17e-05	30	51	3	18206972
Pubmed	Evaluation of embryonic and perinatal myosin gene mutations and the etiology of congenital idiopathic clubfoot.	MYH3 MYH8	1.26e-05	4	51	2	20357587
Pubmed	Three linked myosin heavy chain genes clustered within 370 kb of each other show independent transcriptional and post-transcriptional regulation during differentiation of a mouse muscle cell line.	MYH3 MYH8	1.26e-05	4	51	2	1985022
Pubmed	SPOP suppresses testicular germ cell tumors progression through ubiquitination and degradation of DPPA2.	MYD88 INF2	1.26e-05	4	51	2	33862460
Pubmed	Commensal bacteria direct selective cargo sorting to promote symbiosis.	MYD88 LRRK2	1.26e-05	4	51	2	26237551
Pubmed	The non-canonical poly(A) polymerase FAM46C acts as an onco-suppressor in multiple myeloma.	TENT5C TENT5D	1.26e-05	4	51	2	28931820
Pubmed	ABCA1 and ABCG1 protect against oxidative stress-induced macrophage apoptosis during efferocytosis.	MYD88 ABCA1	1.26e-05	4	51	2	20431058
Pubmed	Structural and Functional Analyses of the FAM46C/Plk4 Complex.	TENT5C TENT5D	1.26e-05	4	51	2	32433990
Pubmed	Genome-wide ENU mutagenesis to reveal immune regulators.	RABL2B RABL2A	1.26e-05	4	51	2	11567631
Pubmed	Human STAGA complex is a chromatin-acetylating transcription coactivator that interacts with pre-mRNA splicing and DNA damage-binding factors in vivo.	SUPT20HL1 SUPT20HL2 TRRAP	1.57e-05	33	51	3	11564863
Pubmed	Placentation defects are highly prevalent in embryonic lethal mouse mutants.	SMG1 TENT5C MED23 FUT8	1.63e-05	103	51	4	29539633
Pubmed	Rabl2 GTP hydrolysis licenses BBSome-mediated export to fine-tune ciliary signaling.	RABL2B RABL2A	2.10e-05	5	51	2	33241915
Pubmed	Sequential accumulation of mRNAs encoding different myosin heavy chain isoforms during skeletal muscle development in vivo detected with a recombinant plasmid identified as coding for an adult fast myosin heavy chain from mouse skeletal muscle.	MYH3 MYH8	2.10e-05	5	51	2	6196357
Pubmed	Developmental pattern of mouse skeletal myosin heavy chain gene transcripts in vivo and in vitro.	MYH3 MYH8	2.10e-05	5	51	2	3829126
Pubmed	Calpain-6 deficiency promotes skeletal muscle development and regeneration.	MYH3 MYH8	2.10e-05	5	51	2	23935533
Pubmed	Temporal regulation of the Mediator complex during muscle proliferation, differentiation, regeneration, aging, and disease.	MYH3 MYH8 MED23	2.62e-05	39	51	3	38690566
Pubmed	Distinct myogenic programs of embryonic and fetal mouse muscle cells: expression of the perinatal myosin heavy chain isoform in vitro.	MYH3 MYH8	3.15e-05	6	51	2	1728586
Pubmed	Organization of human and mouse skeletal myosin heavy chain gene clusters is highly conserved.	MYH3 MYH8	3.15e-05	6	51	2	10077619
Pubmed	Myogenin is required for late but not early aspects of myogenesis during mouse development.	MYH3 MYH8	3.15e-05	6	51	2	7532173
Pubmed	Spatial and temporal changes in myosin heavy chain gene expression in skeletal muscle development.	MYH3 MYH8	3.15e-05	6	51	2	10588881
Pubmed	A fast Myosin super enhancer dictates muscle fiber phenotype through competitive interactions with Myosin genes.	MYH3 MYH8	4.41e-05	7	51	2	35210422
Pubmed	The p38-MK2/3 Module Is Critical for IL-33-Induced Signaling and Cytokine Production in Dendritic Cells.	MYD88 RELB	4.41e-05	7	51	2	29288203
Pubmed	Cholesterol Accumulation in Dendritic Cells Links the Inflammasome to Acquired Immunity.	MYD88 ABCA1	4.41e-05	7	51	2	28479366
Pubmed	Evidence for subcomplexes in the Fanconi anemia pathway.	FANCB FANCM	4.41e-05	7	51	2	16720839
Pubmed	The interplay of UBE2T and Mule in regulating Wnt/β-catenin activation to promote hepatocellular carcinoma progression.	FANCB HUWE1	4.41e-05	7	51	2	33542213
Pubmed	Transmembrane homodimerization of receptor-like protein tyrosine phosphatases.	PTPRA PTPRU	4.41e-05	7	51	2	15978577
Pubmed	Diversity in transcriptional start site selection and alternative splicing affects the 5'-UTR of mouse striated muscle myosin transcripts.	MYH3 MYH8	4.41e-05	7	51	2	16819597
Pubmed	IkappaBzeta regulates T(H)17 development by cooperating with ROR nuclear receptors.	MYD88 RORA	4.41e-05	7	51	2	20383124
Pubmed	LXR Suppresses Inflammatory Gene Expression and Neutrophil Migration through cis-Repression and Cholesterol Efflux.	MYD88 ABCA1	4.41e-05	7	51	2	30590048
Pubmed	Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.	SMG1 DDX56 HUWE1 MED23 TRRAP RPL3	4.41e-05	440	51	6	34244565
Pubmed	Crosstalk between Nodal/activin and MAPK p38 signaling is essential for anterior-posterior axis specification.	SUPT20HL1 SUPT20HL2	5.87e-05	8	51	2	21802298
Pubmed	Genes for skeletal muscle myosin heavy chains are clustered and are not located on the same mouse chromosome as a cardiac myosin heavy chain gene.	MYH3 MYH8	5.87e-05	8	51	2	3864153
Pubmed	RORα-expressing T regulatory cells restrain allergic skin inflammation.	MYD88 RORA	5.87e-05	8	51	2	29500225
Pubmed	CRL3-SPOP ubiquitin ligase complex suppresses the growth of diffuse large B-cell lymphoma by negatively regulating the MyD88/NF-κB signaling.	MYD88 INF2	5.87e-05	8	51	2	31776466
Pubmed	Skeletal muscle phenotypes initiated by ectopic MyoD in transgenic mouse heart.	MYH3 MYH8	5.87e-05	8	51	2	1618148
Pubmed	Serine/Threonine Kinase 40 (Stk40) Functions as a Novel Regulator of Skeletal Muscle Differentiation.	MYH3 MYH8	5.87e-05	8	51	2	27899448
Pubmed	MicroRNA-33 Regulates the Innate Immune Response via ATP Binding Cassette Transporter-mediated Remodeling of Membrane Microdomains.	MYD88 ABCA1	5.87e-05	8	51	2	27471270
Pubmed	Intercrypt sentinel macrophages tune antibacterial NF-κB responses in gut epithelial cells via TNF.	MYD88 RELB	7.54e-05	9	51	2	34529751
Pubmed	FAAP100 is essential for activation of the Fanconi anemia-associated DNA damage response pathway.	FANCB FANCM	7.54e-05	9	51	2	17396147
Pubmed	Muscle-specific gene expression during myogenesis in the mouse.	MYH3 MYH8	7.54e-05	9	51	2	7787235
Pubmed	The expression of myosin genes in developing skeletal muscle in the mouse embryo.	MYH3 MYH8	9.42e-05	10	51	2	2211821
Pubmed	NEDD4L-mediated Merlin ubiquitination facilitates Hippo pathway activation.	AMOTL1 HUWE1	9.42e-05	10	51	2	33058421
Pubmed	The mahogany protein is a receptor involved in suppression of obesity.	ADRA1D PTPRA	9.42e-05	10	51	2	10086355
Pubmed	Modularized functions of the Fanconi anemia core complex.	FANCB FANCM	9.42e-05	10	51	2	24910428
Pubmed	Tel2 regulates the stability of PI3K-related protein kinases.	SMG1 TRRAP	9.42e-05	10	51	2	18160036
Pubmed	Myeloid differentiation primary response protein 88 couples reverse cholesterol transport to inflammation.	MYD88 ABCA1	9.42e-05	10	51	2	20519121
Pubmed	Acceleration of somitic myogenesis in embryos of myogenin promoter-MRF4 transgenic mice.	MYH3 MYH8	9.42e-05	10	51	2	8950513
Pubmed	Tti1 and Tel2 are critical factors in mammalian target of rapamycin complex assembly.	SMG1 TRRAP	1.15e-04	11	51	2	20427287
Pubmed	Prostate cancer-associated SPOP mutations lead to genomic instability through disruption of the SPOP-HIPK2 axis.	MYD88 INF2	1.15e-04	11	51	2	34133717
Pubmed	Whole exome sequencing identifies novel recurrently mutated genes in patients with splenic marginal zone lymphoma.	AMOTL1 TRRAP	1.15e-04	11	51	2	24349473
Pubmed	Glucagon regulates gluconeogenesis through KAT2B- and WDR5-mediated epigenetic effects.	SUPT20HL1 SUPT20HL2	1.15e-04	11	51	2	24051374
Pubmed	The FgfrL1 receptor is required for development of slow muscle fibers.	MYH3 MYH8	1.15e-04	11	51	2	25172430
Pubmed	A human ortholog of archaeal DNA repair protein Hef is defective in Fanconi anemia complementation group M.	FANCB FANCM	1.38e-04	12	51	2	16116422
Pubmed	The CEP19-RABL2 GTPase Complex Binds IFT-B to Initiate Intraflagellar Transport at the Ciliary Base.	RABL2B RABL2A	1.38e-04	12	51	2	28625565
Pubmed	Dysregulation of nuclear receptor COUP-TFII impairs skeletal muscle development.	MYH3 MYH8	1.38e-04	12	51	2	28600496
Pubmed	Contractile protein gene expression in primary myotubes of embryonic mouse hindlimb muscles.	MYH3 MYH8	1.63e-04	13	51	2	8404542
Pubmed	The inhibition of differentiation caused by TGFbeta in fetal myoblasts is dependent upon selective expression of PKCtheta: a possible molecular basis for myoblast diversification during limb histogenesis.	MYH3 MYH8	1.63e-04	13	51	2	8948582
Pubmed	Defective excitation-contraction coupling is partially responsible for impaired contractility in hindlimb muscles of Stac3 knockout mice.	MYH3 MYH8	1.90e-04	14	51	2	27184118
Pubmed	MHF1-MHF2, a histone-fold-containing protein complex, participates in the Fanconi anemia pathway via FANCM.	FANCB FANCM	1.90e-04	14	51	2	20347429
Pubmed	Destabilization of Atoh1 by E3 Ubiquitin Ligase Huwe1 and Casein Kinase 1 Is Essential for Normal Sensory Hair Cell Development.	HUWE1 TRRAP RPL3	1.94e-04	76	51	3	27542412
Pubmed	Integrated associations of genotypes with multiple blood biomarkers linked to coronary heart disease risk.	GSTM3 MYD88 UCP3	1.94e-04	76	51	3	19336475
Pubmed	The Fanconi anemia family of genes and its correlation with breast cancer susceptibility and breast cancer features.	FANCB FANCM	2.19e-04	15	51	2	19536649
Pubmed	Identification of FAAP24, a Fanconi anemia core complex protein that interacts with FANCM.	FANCB FANCM	2.19e-04	15	51	2	17289582
Pubmed	Cooperative activity of cdk8 and GCN5L within Mediator directs tandem phosphoacetylation of histone H3.	MED23 TRRAP	2.19e-04	15	51	2	18418385
Pubmed	Directed proteomic analysis of the human nucleolus.	ILF2 DDX56 RPL3 SNRPD3	2.49e-04	208	51	4	11790298
Pubmed	DelK32-lamin A/C has abnormal location and induces incomplete tissue maturation and severe metabolic defects leading to premature death.	MYH3 MYH8	2.50e-04	16	51	2	22090424
Pubmed	Identification of cAMP analogue inducible genes in RAW264 macrophages.	ABCA1 LRRK2	2.50e-04	16	51	2	11004510
Pubmed	Esophageal Atresia / Tracheoesophageal Fistula Overview – RETIRED CHAPTER, FOR HISTORICAL REFERENCE ONLY	FANCB FANCM	2.50e-04	16	51	2	20301753
Pubmed	Elucidation of the Fanconi Anemia Protein Network in Meiosis and Its Function in the Regulation of Histone Modifications.	FANCB FANCM	2.50e-04	16	51	2	27760317
Pubmed	A histone-fold complex and FANCM form a conserved DNA-remodeling complex to maintain genome stability.	FANCB FANCM	2.50e-04	16	51	2	20347428
Pubmed	Slow and fast fiber isoform gene expression is systematically altered in skeletal muscle of the Sox6 mutant, p100H.	MYH3 MYH8	2.83e-04	17	51	2	16124007
Pubmed	FAAP20: a novel ubiquitin-binding FA nuclear core-complex protein required for functional integrity of the FA-BRCA DNA repair pathway.	FANCB FANCM	3.18e-04	18	51	2	22343915
Pubmed	Defective myogenesis in the absence of the muscle-specific lysine methyltransferase SMYD1.	MYH3 MYH8	3.18e-04	18	51	2	26688546
Pubmed	The DNA sequence of the human X chromosome.	SUPT20HL1 SUPT20HL2 HUWE1 CHM TENT5D	3.23e-04	407	51	5	15772651
Pubmed	OTUB2 Promotes Cancer Metastasis via Hippo-Independent Activation of YAP and TAZ.	ILF2 AMOTL1 PTPN21	3.29e-04	91	51	3	30472188
Pubmed	The cell proliferation antigen Ki-67 organises heterochromatin.	SMG1 MYH3 DNAH3 DDX56 TRRAP	3.34e-04	410	51	5	26949251
Pubmed	LGALS3BP regulates centriole biogenesis and centrosome hypertrophy in cancer cells.	SMG1 ILF2 PPP2R5E HUWE1 RPL3 SNRPD3	3.35e-04	639	51	6	23443559
Pubmed	A Global Analysis of the Receptor Tyrosine Kinase-Protein Phosphatase Interactome.	SMG1 ABCA1 PTPRA PTPRU RPL3	3.73e-04	420	51	5	28065597
Pubmed	RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity.	GSTM3 ILF2 DDX56 RPL3 SNRPD3	3.94e-04	425	51	5	21081503
Pubmed	A large multiethnic GWAS meta-analysis of cataract identifies new risk loci and sex-specific effects.	TENT5C RORA	3.94e-04	20	51	2	34127677
Pubmed	Disruption of the mouse MRF4 gene identifies multiple waves of myogenesis in the myotome.	MYH3 MYH8	3.94e-04	20	51	2	7588068
Pubmed	A ubiquitin-binding protein, FAAP20, links RNF8-mediated ubiquitination to the Fanconi anemia DNA repair network.	FANCB FANCM	3.94e-04	20	51	2	22705371
Pubmed	Cripto is required for mesoderm and endoderm cell allocation during mouse gastrulation.	SUPT20HL1 SUPT20HL2	4.35e-04	21	51	2	23747598
Pubmed	Supt20 is required for development of the axial skeleton.	SUPT20HL1 SUPT20HL2	4.35e-04	21	51	2	27894818
Pubmed	p38 and a p38-interacting protein are critical for downregulation of E-cadherin during mouse gastrulation.	SUPT20HL1 SUPT20HL2	4.78e-04	22	51	2	16751104
Pubmed	Opposing gene regulatory programs governing myofiber development and maturation revealed at single nucleus resolution.	MYH3 MYH8	4.78e-04	22	51	2	37468485
Pubmed	A new role for the calcineurin/NFAT pathway in neonatal myosin heavy chain expression via the NFATc2/MyoD complex during mouse myogenesis.	MYH3 MYH8	4.78e-04	22	51	2	24301466
Pubmed	Multiple genetic variants along candidate pathways influence plasma high-density lipoprotein cholesterol concentrations.	ABCA1 UCP3 RELB MED23	5.00e-04	250	51	4	18660489
Cytoband	Xp22.11	SUPT20HL1 SUPT20HL2	2.51e-04	21	51	2	Xp22.11
Cytoband	15q22.2	VPS13C RORA	4.82e-04	29	51	2	15q22.2
Cytoband	16p12.3	SMG1 DNAH3	6.63e-04	34	51	2	16p12.3
Cytoband	Ensembl 112 genes in cytogenetic band chrXp22	SUPT20HL1 FANCB SUPT20HL2	2.74e-03	250	51	3	chrXp22
GeneFamily	RAB like GTPases	RABL2B RABL2A	3.22e-05	5	33	2	394
GeneFamily	Myosin heavy chains	MYH3 MYH8	3.34e-04	15	33	2	1098
GeneFamily	Ring finger proteins\|Fanconi anemia complementation groups\|Protein phosphatase 1 regulatory subunits\|BRCA1 A complex\|BRCA1 B complex\|BRCA1 C complex	FANCB FANCM	6.01e-04	20	33	2	548
GeneFamily	Protein tyrosine phosphatases, receptor type	PTPRA PTPRU	6.64e-04	21	33	2	813
ToppCell	PND10\|World / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	C6orf62 SEPTIN4 AMOTL1 P2RY14 RORA	2.31e-06	190	50	5	d67e2814047c8df2ae4b7bc8be9539f5df6ecef2
ToppCell	COVID_non-vent-Lymphocytic\|COVID_non-vent / Disease condition, Lineage, Cell class and subclass	SMG1 TENT5C RORA GNLY RPL3	2.76e-06	197	50	5	c672915f8c8c1e948d251f6eaf9f84a5600c1193
ToppCell	facs-Pancreas-Exocrine-24m-Epithelial-pancreatic_B_cell\|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	GSTM3 RORA TGM7 PTPRU	6.89e-06	109	50	4	0d4128af237afcc0adb4dfdd206fa3ddbe5b0e86
ToppCell	Parenchymal-10x3prime_v2-Stromal-Pericyte-Muscle_pericyte_systemic\|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations	RABL2A SEPTIN4 AMOTL1 PTPN21	1.90e-05	141	50	4	dcc56aef1b31bfe0de84cb0b5c77d242681cf19c
ToppCell	367C-Lymphocytic-NK_cells-NK_cell_B0\|367C / Donor, Lineage, Cell class and subclass (all cells)	RABL2B RABL2A CHM FANCM	2.36e-05	149	50	4	41f28138bde45d0b814e116837e5a32b5e80d54a
ToppCell	PND14-Immune-Immune_Myeloid-Monocytic-Macrophage-AM-AM_mature\|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif	GSTM3 C6orf62 UCP3 DLEC1	4.53e-05	176	50	4	b0b87eebcf5c994386b39ca607e17f10e9d9de74
ToppCell	Fetal_29-31_weeks-Epithelial-ciliated_cell-D088\|Fetal_29-31_weeks / Lineage, Cell type, age group and donor	DNAH3 RABL2B RABL2A DLEC1	5.05e-05	181	50	4	dfce05bd472f67e6e2bb60ebd6fd34f0a9aeeca6
ToppCell	10x5'-Liver-Lymphocytic_T_CD4-T_CD4/CD8\|Liver / Manually curated celltypes from each tissue	SMG1 RORA HUWE1 FUT8	5.05e-05	181	50	4	f2315414e714ac86211546a935660c4be6e85f1b
ToppCell	Posterior_cortex-Neuronal-Inhibitory-iN2(Gad1Gad2)-Cplx3-Inhibitory_Neuron.Gad1Gad2.Cplx3-Npy_(Cortical_subplate_interneuron)\|Posterior_cortex / BrainAtlas - Mouse McCarroll V32	GSTM3 MYH8 POPDC3	5.13e-05	64	50	3	28acc0d394b8cd2fd93ae5e0801f0ff1dd4b16ac
ToppCell	Posterior_cortex-Neuronal-Inhibitory-iN2(Gad1Gad2)-Cplx3-Inhibitory_Neuron.Gad1Gad2.Cplx3-Npy_(Cortical_subplate_interneuron)-\|Posterior_cortex / BrainAtlas - Mouse McCarroll V32	GSTM3 MYH8 POPDC3	5.13e-05	64	50	3	61414e0fa2242f156f0f45f8733b831b7f965dd8
ToppCell	CF-Lymphoid-T_cell_&_NK_cell\|CF / Disease state, Lineage and Cell class	TENT5C RORA GNLY FUT8	5.16e-05	182	50	4	a8dfc59a3974e3433f434676b7c2749d0fcfc8b2
ToppCell	367C-Lymphocytic-NK_cells-NK_cell_B0\|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)	RABL2B RABL2A CHM FANCM	5.61e-05	186	50	4	74c238759c5d3fd39127ec0060d0c2cb16b326d4
ToppCell	367C-Lymphocytic-NK_cells-NK_cell_B0\|NK_cells / Donor, Lineage, Cell class and subclass (all cells)	RABL2B RABL2A CHM FANCM	5.73e-05	187	50	4	816d37a70f7ec382a268fe828b3dfe737a36a4bf
ToppCell	10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8\|GI_small-bowel / Manually curated celltypes from each tissue	SMG1 VPS13C RORA HUWE1	5.85e-05	188	50	4	ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCell	tumor_Lymph_Node_/_Brain-T/NK_cells-CD4+_Th\|T/NK_cells / Location, Cell class and cell subclass	TENT5C RORA RELB RPL3	6.48e-05	193	50	4	7fcd6139ac3e1384a1017b6b8152e3431e056f6a
ToppCell	Smart-seq2-tissue-resident_(Smart-seq2)-lymphocytic\|tissue-resident_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	TENT5C RORA GNLY RPL3	6.48e-05	193	50	4	81fdb825245cd346bf7277086b95d72a47bded73
ToppCell	PBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_Tem\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	TENT5C RORA GNLY RPL3	6.61e-05	194	50	4	e72be6dc2711c1d4f16943c8615cf9dc2e961ff3
ToppCell	PBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_Tem\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	TENT5C RORA GNLY RPL3	6.61e-05	194	50	4	ac03be73fdc32dacd4a450c0fb28617e043b8444
ToppCell	PBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_Tem-\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	TENT5C RORA GNLY RPL3	6.61e-05	194	50	4	7ab4418a8a12c488d74af3676bdac672628da80c
ToppCell	E12.5\|World / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase	GSTM3 ILF2 RPL3 SNRPD3	6.61e-05	194	50	4	4b335e4da58de1cd94194dc4208ce83854e5e50a
ToppCell	PBMC-Control-Lymphocyte-T/NK-CD8+_T-CD8+_Tem-\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	TENT5C RORA GNLY RPL3	6.61e-05	194	50	4	760761ce7d22edf9a8cec71e8ab0caa273fce3f7
ToppCell	mild_COVID-19-CD4+_CTL\|World / disease group, cell group and cell class (v2)	TENT5C RORA GNLY RPL3	6.74e-05	195	50	4	980909246c30471c9f2f97c3b20b6d6d20fe574e
ToppCell	Healthy-CD8+_Tem\|World / disease group, cell group and cell class	TENT5C RORA GNLY RPL3	6.74e-05	195	50	4	3d6f46b31c0254e9577a560364694b42964df198
ToppCell	moderate-Epithelial-Ciliated\|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	DNAH3 RABL2B RABL2A DLEC1	6.74e-05	195	50	4	3486eae5fdb062a75a907b896c9d7b396d2aa195
ToppCell	moderate-Epithelial-Ciliated\|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	DNAH3 RABL2B RABL2A DLEC1	6.74e-05	195	50	4	e80f5cdf0b18066b3e6c2f5452e58f101c67932c
ToppCell	tumor_Lung-T/NK_cells\|tumor_Lung / Location, Cell class and cell subclass	TENT5C RORA GNLY RPL3	6.88e-05	196	50	4	13396bb5f0dd0dce7219d3f7a1fc1fcb6b1ee134
ToppCell	Healthy/Control-gd_T\|Healthy/Control / Disease group and Cell class	TENT5C RORA GNLY RPL3	6.88e-05	196	50	4	a6f9e55cd1cd7facadb3f508bded68023c997f3f
ToppCell	Healthy-CD4+_CTL\|Healthy / disease group, cell group and cell class	TENT5C RORA GNLY RPL3	6.88e-05	196	50	4	9da0ea4ad84d6e20e4349d3d1a8cc4d61d08c84f
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d12-22-Lymphocytic\|Severe-critical_progression_d12-22 / Compartment, severity and other cell annotations on 10x 3' data (130k)	SMG1 RORA GNLY RPL3	6.88e-05	196	50	4	a9157809122e6fc5783a291522f103bef30943e4
ToppCell	moderate-Lymphoid-Treg\|Lymphoid / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	SMG1 ABCA1 VPS13C RORA	6.88e-05	196	50	4	9152f4a8a27ff4ee28f231c5ad00eb2edd9ea6da
ToppCell	Healthy/Control-CD8+_Tem\|World / Disease group and Cell class	TENT5C RORA GNLY RPL3	6.88e-05	196	50	4	a6dc92476156a695e15373ea57dc04e30014ac55
ToppCell	NS-control-d_0-4-Epithelial-Ciliated\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	DNAH3 RABL2B RABL2A DLEC1	6.88e-05	196	50	4	d46ab80554dd3c1cc81e1938ea2acfd5e85c6d2a
ToppCell	Healthy/Control-gd_T\|World / Disease group and Cell class	TENT5C RORA GNLY RPL3	6.88e-05	196	50	4	b982c84552e7efbff2be861f0f569f40804f5d88
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD8+_T-CD8+_Tem\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	TENT5C RORA GNLY RPL3	7.01e-05	197	50	4	902e2ce011a938c1de39ff53ebbb2ec5557e48bc
ToppCell	normal-na-Lymphocytic_NK-T_mait\|normal / PBMC cell types (v2) per disease, treatment status, and sex	TENT5C P2RY14 RORA GNLY	7.01e-05	197	50	4	5abe983f9750085ec7b57bcb8c36bdfe78a6ee4c
ToppCell	NS-moderate-d_0-4-Epithelial-Ciliated\|d_0-4 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)	DNAH3 RABL2B RABL2A DLEC1	7.01e-05	197	50	4	71fea4aa6ce96c7693fa94792d08770622873850
ToppCell	368C-Lymphocytic\|368C / Donor, Lineage, Cell class and subclass (all cells)	TENT5C RORA GNLY RPL3	7.01e-05	197	50	4	04d069a03ed659bd93395972979a37402f500b9c
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD8+_T-CD8+_Tem-\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	TENT5C RORA GNLY RPL3	7.01e-05	197	50	4	836fcb20d3a1f9cf14f6fd505fbb6bad4650fd28
ToppCell	normal-na-Lymphocytic_NK-T_mait-female\|normal / PBMC cell types (v2) per disease, treatment status, and sex	TENT5C P2RY14 RORA GNLY	7.01e-05	197	50	4	8752c0f37979aa7bf2e8aee6990fb6307a6666b7
ToppCell	normal_Lung-T/NK_cells-CD8_low_T\|normal_Lung / Location, Cell class and cell subclass	TENT5C RORA GNLY RPL3	7.01e-05	197	50	4	559b22ff973a1551e614a972085343e7d8e8a668
ToppCell	control-Epithelial-Ciliated\|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls	DNAH3 RABL2B RABL2A DLEC1	7.01e-05	197	50	4	d4e963c1f82996371bf3d63578ee9fce8e00c5a8
ToppCell	Healthy-CD8+_Tem\|Healthy / disease group, cell group and cell class	TENT5C RORA GNLY RPL3	7.01e-05	197	50	4	8d60fdd5ce80c3496637fd3257d25258df6d7f75
ToppCell	COVID_vent-Lymphocytic\|COVID_vent / Disease condition, Lineage, Cell class and subclass	TENT5C RORA GNLY RPL3	7.15e-05	198	50	4	ee80f647317377081b4bd194ee2801f556b3a53b
ToppCell	Healthy_donor-gd_T\|Healthy_donor / disease group, cell group and cell class (v2)	TENT5C RORA GNLY RPL3	7.15e-05	198	50	4	25158815287efbdd8f463baa755cbb874f3905f3
ToppCell	mild_COVID-19_(asymptomatic)-CD8+_Tem\|mild_COVID-19_(asymptomatic) / disease group, cell group and cell class (v2)	TENT5C RORA GNLY RPL3	7.15e-05	198	50	4	a7519bbbb67d319635ddbe05a2a154c46b77ce87
ToppCell	(220)_CD8+_Cytotoxic_T_cell\|World / immune cells in Peripheral Blood (logTPM normalization)	TENT5C RORA GNLY RPL3	7.15e-05	198	50	4	2af389b8ea5767ba56fe64d719afe5be3f9a43ec
ToppCell	normal_Lung-T/NK_cells\|normal_Lung / Location, Cell class and cell subclass	TENT5C RORA GNLY RPL3	7.15e-05	198	50	4	88efe668d1986ba1695eeb1f3768767d2927dd64
ToppCell	PBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic\|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)	TENT5C RORA GNLY RPL3	7.15e-05	198	50	4	a3bd099ef0e606c2da690a6fcf6f79e9360c9c9f
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD8+_T\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	TENT5C RORA GNLY RPL3	7.29e-05	199	50	4	1c12b15004fa6ca9ae72a6d6f8f9a5fdeb755bd1
ToppCell	PBMC-Mild-Lymphocyte-T/NK-CD8+_T\|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	TENT5C RORA GNLY RPL3	7.29e-05	199	50	4	c8c89779dda4dcfb26bf86492c2e5a4f158eb8d2
ToppCell	Smart-seq2-bone_marrow_(Smart-seq2)-lymphocytic\|bone_marrow_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	C6orf62 TENT5C GNLY RPL3	7.29e-05	199	50	4	fe6f2e85df56057907c711e68629c57a3b3d3e05
ToppCell	Severe-Lymphoid\|Severe / Condition, Lineage, Cell class and cell subclass	TENT5C RORA GNLY RPL3	7.29e-05	199	50	4	928e346b0f31d991ebab12fefb4eb9f4249e601d
ToppCell	Sepsis-ICU-NoSEP-Lymphocyte-T/NK-gd_T\|ICU-NoSEP / Disease, condition lineage and cell class	SEPTIN4 RORA GNLY RPL3	7.44e-05	200	50	4	2c2cea7691c340912f6ad77667a580a071eaeb8b
ToppCell	Biopsy_IPF-Epithelial-Ciliated\|Biopsy_IPF / Sample group, Lineage and Cell type	DNAH3 RABL2B RABL2A DLEC1	7.44e-05	200	50	4	bb8c99156e547a8eb6599b6b6bc3c66bf77af7f8
ToppCell	primary_visual_cortex-Neuronal-GABAergic_neuron-Lamp5-Lamp5_Fam19a1_Pax6\|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype	PIEZO2 POPDC3 TBC1D8B	4.18e-04	130	50	3	60e28d452d0e2af768459ba8dbe998117c94a251
ToppCell	PND01-03-samps-Mesenchymal-Myofibroblast-myofibroblast_-_mature_-_B\|PND01-03-samps / Age Group, Lineage, Cell class and subclass	AMOTL1 P2RY14 RORA	4.98e-04	138	50	3	8d70e64843f7c3be8ee4203cc126fdf1001f0df5
ToppCell	(00)_Basal\|World / shred by cell type and Timepoint	ABCA1 AMOTL1 RPL3	6.22e-04	149	50	3	49e39206f37cee124ca4763c79425b805e50624b
ToppCell	saliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_B\|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DNAH3 DLEC1 FUT8	6.35e-04	150	50	3	53de595376a9fc92491dfd58ff25938b0bf79903
ToppCell	390C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_0.5\|390C / Donor, Lineage, Cell class and subclass (all cells)	RORA GNLY MED23	6.35e-04	150	50	3	fdbfc8f743cf848978cf0488493f6df60be53982
ToppCell	saliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_B-B_cell\|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)	DNAH3 DLEC1 FUT8	6.35e-04	150	50	3	e4b40b3243ed26d0c46bf196ac06e148834e7ed2
ToppCell	Int-URO-Lymphocyte-T_NK-CD4_CTL\|Int-URO / Disease, Lineage and Cell Type	SEPTIN4 RORA GNLY	6.72e-04	153	50	3	fdc7dfa8f4db90bfdc7180bf178cf6d2dd064d97
ToppCell	TCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma-Stomach_Adenocarcinoma_-_Tubular-6\|TCGA-Stomach / Sample_Type by Project: Shred V9	FBXW10B INF2 TBC1D8B	7.51e-04	159	50	3	655c0749c238bd68cb797adb83e25a23b8a3cc9d
ToppCell	Control-Stromal-Pericyte\|Stromal / Disease state, Lineage and Cell class	ADRA1D SEPTIN4 CHM	7.51e-04	159	50	3	6f50c381cd8a26a5a90bf0ce909713cea96910d7
ToppCell	PBMC-Control-Lymphocyte-T/NK-CD4+_T-Treg-Treg_6\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)	FBXW10B MYH3 TENT5C	7.93e-04	162	50	3	6ffcf369d954c20ce036aa1d072cee4e205f728e
ToppCell	PBMC-Control-Lymphocyte-T/NK-CD4+_T-Treg-Treg_6\|Control / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	FBXW10B MYH3 TENT5C	7.93e-04	162	50	3	bcbf7f80a2a1c80def795e345f16cf16e8b9d03b
ToppCell	367C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_6\|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)	LRRK2 FANCM TRRAP	8.07e-04	163	50	3	63b0badaee3b2d827b1f4524510e3384d8f8fcde
ToppCell	saliva-Severe-critical_progression_d28-40-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c02-GPR183\|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)	UCP3 DLEC1 ARMC1	8.51e-04	166	50	3	ceb0a48c0d853448fd45ac31dde046df9a178571
ToppCell	COVID-19-APC-like-Monocyte-derived_macrophages\|COVID-19 / group, cell type (main and fine annotations)	RABL2A DDX56 DLEC1	8.66e-04	167	50	3	854a5dbd43f2b25825a71d37fd7779507783a99a
ToppCell	droplet-Large_Intestine-COLON_PROXIMAL-30m-Epithelial-Lgr5+_amplifying_undifferentiated_cell\|Large_Intestine / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	VPS13C LRRK2 TBC1D8B	8.81e-04	168	50	3	d69452e2cfeb74023b5cf3d09064d7dcad0008ec
ToppCell	ICU-NoSEP-Lymphocyte-T_NK-CD4_CTL\|ICU-NoSEP / Disease, Lineage and Cell Type	RORA GNLY RPL3	8.96e-04	169	50	3	cbda36f32bd78322dcfe303a44413415d08e5ea3
ToppCell	3'-Broncho-tracheal-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.0.2\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH3 RABL2A DLEC1	8.96e-04	169	50	3	14aadc2d1bf66eb47dac33b4d61ddb3c942caa4f
ToppCell	normal_Lung-Fibroblasts-Pericytes\|Fibroblasts / Location, Cell class and cell subclass	ADRA1D SEPTIN4 P2RY14	9.12e-04	170	50	3	d69c0ea4cb6b204f19d0a5d2164afb42184779ac
ToppCell	Control-Stromal_mesenchymal-Lung_smooth_muscle-Pericyte_2\|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2	ADRA1D AMOTL1 P2RY14	9.12e-04	170	50	3	5570c0e825bca77613bf0ebde620cf744fa1cb84
ToppCell	Smart-seq2-lymph_node_(Smart-seq2)-lymphocytic\|lymph_node_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type	C6orf62 TENT5C RPL3	9.27e-04	171	50	3	2991096336eea87740708360e34f84a00cb2eff2
ToppCell	Control-MAIT\|Control / Disease group and Cell class	ABCA1 UCP3 P2RY14	9.43e-04	172	50	3	552bc62e8e8bb0ac1cd0452f4410a3af087787eb
ToppCell	367C-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_6\|CD8+_Cytotoxic_T-cell / Donor, Lineage, Cell class and subclass (all cells)	LRRK2 FANCM TRRAP	9.43e-04	172	50	3	da959c1abadafd79b7a0088a25eb8ef8efa3a0c2
ToppCell	3'-Distal_airway-Epithelial-Airway_ciliated-ciliated_columnar_cell_of_tracheobronchial_tree-Multiciliated_(non-nasal)-Multiciliated_(non-nasal)_L.0.3.3.0\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH3 RABL2A DLEC1	9.59e-04	173	50	3	c3762655caa79ac4879876f470d32578a3c93b01
ToppCell	mild_COVID-19_(asymptomatic)-gd_T\|World / disease group, cell group and cell class (v2)	TENT5C RORA GNLY	9.59e-04	173	50	3	b6615ff02f5017d7150b1e33b53f8c7a26081a0d
ToppCell	AT1_cells-Donor_07\|World / lung cells shred on cell class, cell subclass, sample id	UCP3 RELB PTPN21	9.59e-04	173	50	3	b29816427428c7053017477f59b828bf1357f3b2
ToppCell	Int-URO-Lymphocyte-T_NK-NK_CD56bright\|Int-URO / Disease, Lineage and Cell Type	MYH3 GNLY RPL3	9.75e-04	174	50	3	93c7acd5941a5f235ec4c57461f78ee2871e7336
ToppCell	facs-Heart-RV-24m-Mesenchymal-valve_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ADRA1D SEPTIN4 P2RY14	9.91e-04	175	50	3	bfac175b79bb7d3d81074a2407c206a7647ee75d
ToppCell	droplet-Lung-1m-Hematologic-myeloid-myeloid_dendritic_cell-Ccr7+_dendritic\|1m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype	RELB DLEC1 PTPN21	9.91e-04	175	50	3	1b910c08d2bfbcc77431ee66103e63a11a9d39fe
ToppCell	facs-Heart-RV-24m-Mesenchymal-valve_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ADRA1D SEPTIN4 P2RY14	9.91e-04	175	50	3	c94fb35bbac95123201ca87ca835aecaefc0c490
ToppCell	Int-URO-Lymphocyte-T_NK-gdT\|Int-URO / Disease, Lineage and Cell Type	RORA GNLY RPL3	1.01e-03	176	50	3	15016a73c953d8d3e7c32a05ead5e7261f9914ca
ToppCell	CV-Severe-7\|CV / Virus stimulation, Condition and Cluster	SMG1 P2RY14 HUWE1	1.01e-03	176	50	3	3de0c7d77210049e5616db21eed1490a17a5ec2d
ToppCell	CV-Severe-7\|Severe / Virus stimulation, Condition and Cluster	SMG1 P2RY14 HUWE1	1.02e-03	177	50	3	82fdd6185b368f54f03de389427cbe3071d21a99
ToppCell	3'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-pericyte_cell-Pericytes-Pericytes_L.2.3.1.1\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	ADRA1D SEPTIN4 P2RY14	1.02e-03	177	50	3	452ec2df36c6d656a7cdadc55be545ccdb146a29
ToppCell	3'_v3\|World / Manually curated celltypes from each tissue	C6orf62 GNLY SNRPD3	1.04e-03	178	50	3	42502f14d9c756df8104900ac6484477b885d3d9
ToppCell	3'-Broncho-tracheal-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Multiciliated_(nasal)-Multiciliated_(nasal)_L.0.3.1.1\|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5	DNAH3 RABL2A DLEC1	1.04e-03	178	50	3	3b12db04006db6e94fc45649a4b3a63b92f21a61
ToppCell	IIF-Lymphocyte-T_NK-gdT\|IIF / Disease, Lineage and Cell Type	RORA GNLY RPL3	1.04e-03	178	50	3	3344d1328fd9c570c3a4b2629edec627a442d0e0
ToppCell	3'-Child09-12-SmallIntestine-Hematopoietic-T_cells-MAIT_cell\|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract	FANCB RORA GNLY	1.04e-03	178	50	3	0290868dc990878eac5c182fe64968333bc52450
ToppCell	368C-Lymphocytic-CD4_T-cell-Treg_cell_2\|368C / Donor, Lineage, Cell class and subclass (all cells)	TENT5C RORA MED23	1.07e-03	180	50	3	551b8de8d933d11bcd3897aeb2fd033355f958e2
ToppCell	control-CD8+_Tem\|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class	TENT5C GNLY RPL3	1.07e-03	180	50	3	592fb72cc344efff1bd3376d9f28c79745c61469
ToppCell	normal_Lung-Fibroblasts-Pericytes\|normal_Lung / Location, Cell class and cell subclass	ADRA1D SEPTIN4 P2RY14	1.09e-03	181	50	3	f74941e49950027360d71ea3b205fc20c6929766
ToppCell	facs-Marrow-T-cells-3m-Hematologic\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AMOTL1 TENT5C HUWE1	1.09e-03	181	50	3	57f0cc749ae8b6a3d77e2af31f9a6e4739c57049
ToppCell	facs-Heart-LV-3m-Mesenchymal-valve_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ADRA1D SEPTIN4 P2RY14	1.09e-03	181	50	3	1db1eb7d330a7e5090994007ae287e11f0a74450
ToppCell	facs-Heart-LV-3m-Mesenchymal-valve_cell\|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation	ADRA1D SEPTIN4 P2RY14	1.09e-03	181	50	3	06174ce9240c9261c0f51a1b0d875335d60722e5
ToppCell	facs-Marrow-T-cells-3m-Hematologic-hematopoietic_stem_cell\|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation	AMOTL1 TENT5C HUWE1	1.09e-03	181	50	3	d01b35cc2fc57991a35be6a06cb7351fbabd9a11
ToppCell	PBMC-Severe-Lymphocyte-T/NK-CD8+_T-MAIT-\|Severe / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)	TENT5C RORA RPL3	1.11e-03	182	50	3	f30e5a21b49f30b82e2b6f1fd2daefd805a40083
ToppCell	droplet-Liver-Npc-21m-Endothelial\|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation	SEPTIN4 AMOTL1 PTPRU	1.11e-03	182	50	3	dc55de945c6f78f32eb3a1b3520835eb8417e068
Drug	salicyl-AMP	PTPRU ARMC1	4.35e-06	2	48	2	CID000636428
Disease	Distal arthrogryposis	MYH3 MYH8 PIEZO2	3.37e-07	9	48	3	cv:C0265213
Disease	ARTHROGRYPOSIS, DISTAL, TYPE 2B	MYH3 PIEZO2	3.87e-05	6	48	2	C1834523
Disease	low density lipoprotein cholesterol measurement, cholesteryl esters:total lipids ratio	ABCA1 DDX56 RORA RELB	1.13e-04	153	48	4	EFO_0004611, EFO_0020944
Disease	dilated cardiomyopathy 1S (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:0110454 (implicated_via_orthology)
Disease	autosomal dominant hyaline body myopathy (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:0111269 (implicated_via_orthology)
Disease	congenital myopathy 6 (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:0080719 (implicated_via_orthology)
Disease	distal arthrogryposis type 2B3 (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:0111602 (implicated_via_orthology)
Disease	inclusion body myositis (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:3429 (implicated_via_orthology)
Disease	distal arthrogryposis type 2A (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:0111605 (implicated_via_orthology)
Disease	familial hypertrophic cardiomyopathy (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:0080326 (implicated_via_orthology)
Disease	distal arthrogryposis type 1 (implicated_via_orthology)	MYH3 MYH8	1.16e-04	10	48	2	DOID:0111596 (implicated_via_orthology)
Disease	distal myopathy (implicated_via_orthology)	MYH3 MYH8	1.69e-04	12	48	2	DOID:11720 (implicated_via_orthology)
Disease	myotonia congenita (implicated_via_orthology)	MYH3 MYH8	1.69e-04	12	48	2	DOID:2106 (implicated_via_orthology)
Disease	prediabetes syndrome (biomarker_via_orthology)	UCP3 RELB	1.69e-04	12	48	2	DOID:11716 (biomarker_via_orthology)
Disease	restrictive cardiomyopathy (implicated_via_orthology)	MYH3 MYH8	2.00e-04	13	48	2	DOID:397 (implicated_via_orthology)
Disease	membranous glomerulonephritis (biomarker_via_orthology)	ABCA1 PTPRU	2.33e-04	14	48	2	DOID:10976 (biomarker_via_orthology)
Disease	distal arthrogryposis (implicated_via_orthology)	MYH3 MYH8	2.68e-04	15	48	2	DOID:0050646 (implicated_via_orthology)
Disease	Bone marrow hypocellularity	FANCB FANCM	3.90e-04	18	48	2	C1855710
Disease	lipid measurement, intermediate density lipoprotein measurement	ABCA1 DDX56 RELB	5.19e-04	96	48	3	EFO_0004529, EFO_0008595
Disease	phospholipid measurement, intermediate density lipoprotein measurement	ABCA1 DDX56 RELB	5.68e-04	99	48	3	EFO_0004639, EFO_0008595
Disease	Ovarian Serous Adenocarcinoma	LRRK2 TRRAP	6.41e-04	23	48	2	C1335177
Disease	free cholesterol measurement, intermediate density lipoprotein measurement	ABCA1 DDX56 RELB	6.56e-04	104	48	3	EFO_0008591, EFO_0008595
Disease	Fanconi Anemia	FANCB FANCM	7.59e-04	25	48	2	C0015625
Disease	Pancytopenia	FANCB FANCM	8.21e-04	26	48	2	C0030312
Disease	Acute monocytic leukemia	FANCB FANCM	8.21e-04	26	48	2	C0023465
Disease	free cholesterol measurement	ABCA1 DDX56 RELB	8.34e-04	113	48	3	EFO_0008591
Disease	total cholesterol measurement, low density lipoprotein cholesterol measurement	ABCA1 DDX56 RELB	8.56e-04	114	48	3	EFO_0004574, EFO_0004611
Disease	Colorectal Carcinoma	GSTM3 DNAH3 VPS18 ABCA1 P2RY14 PTPRU	9.31e-04	702	48	6	C0009402
Disease	low density lipoprotein cholesterol measurement, phospholipid measurement	ABCA1 DDX56 RELB	9.93e-04	120	48	3	EFO_0004611, EFO_0004639
Disease	Miller Dieker syndrome	FANCB FANCM	1.02e-03	29	48	2	C0265219
Disease	NEPHROTIC SYNDROME, STEROID-RESISTANT, AUTOSOMAL RECESSIVE	INF2 TBC1D8B	1.09e-03	30	48	2	C1868672
Disease	cholesteryl ester measurement, low density lipoprotein cholesterol measurement	ABCA1 DDX56 RELB	1.14e-03	126	48	3	EFO_0004611, EFO_0010351
Disease	Ovarian Mucinous Adenocarcinoma	LRRK2 TRRAP	1.17e-03	31	48	2	C1335167
Disease	Abnormality of radial ray	FANCB FANCM	1.32e-03	33	48	2	C4228778
Disease	allergic rhinitis	ABCA1 RORA DLEC1	1.34e-03	133	48	3	EFO_0005854
Disease	lifestyle measurement, anxiety disorder measurement	ADRA1D PIEZO2 RORA	1.45e-03	137	48	3	EFO_0007795, EFO_0010724
Disease	free cholesterol measurement, low density lipoprotein cholesterol measurement	ABCA1 DDX56 RELB	1.45e-03	137	48	3	EFO_0004611, EFO_0008591

Protein segments in the cluster

Peptide	Gene	Start	Entry
TYPEVVRMVSCNIFR	PPP2R5E	111	Q16537
RYQSMRRDVIGCTQE	C6orf62	96	Q9GZU0
TNQAIRTISRFMECV	ABCA1	491	O95477
VISFTFQMAVQRCVV	ARMC1	171	Q9NVT9
VVQANRRCQDMEYTI	AMOTL1	741	Q8IY63
ENMCSRVQYRQISRA	CHM	441	P24386
VDMNVVRICFQASYR	RELB	261	Q01201
ACIMVFDIQRKVTYR	RABL2A	96	Q9UBK7
ACIMVFDVQRKVTYR	RABL2B	96	Q9UNT1
VLMEERNVFCGTYNV	FBXW10B	391	O95170
NGCDYIVSNRMVVER	FANCM	1851	Q8IYD8
MIQQLATYCARDVRV	DDX56	101	Q9NY93
TQAVCRGFLMRVEYQ	MYH8	791	P13535
VCRNFMRRYQSRVTQ	GNLY	106	P22749
QERTRCMIEIGVAFY	MED23	1261	Q9ULK4
CRRMVVVVSDDYLQS	MYD88	216	Q99836
RVIYNFCNSVRVMMT	LRRK2	2446	Q5S007
NQVMDFRTQLIRLCY	GSTM3	106	P21266
RRYTVQFTTMVQVNE	HUWE1	1656	Q7Z6Z7
VCSQQYRFSIVMNEL	INF2	171	Q27J81
CSRRVNMIQTEEQYI	PTPRU	1121	Q92729
QRMMLVQTLCQYTFV	PTPN21	1146	Q16825
ILIIYSRNQTVMFQC	FANCB	716	Q8NB91
NIRVEVVSMCKYFQE	DNAH3	2616	Q8TD57
YERCSRRNMYVNIAV	LINC00032	76	P0C843
QQDMVCYTAQTLVRI	ILF2	306	Q12905
TCFVSQQRVREVYLM	DLEC1	1646	Q9Y238
VICFMQFVHIAYQVR	POPDC3	86	Q9HBV1
YGFVSRIRAQRCQMV	PTPRA	471	P18433
RAQEIGYTVCLIQMF	OR52L2P	106	Q8NGH6
TFSSQVCRVAYEIMQ	FUT8	466	Q9BYC5
CVIVEVRDYRQSSNM	SUPT20HL1	141	Q3ZLR7
NYRAQCIQSMTRLVV	SEPTIN4	406	O43236
YCQVIRVIAHTQMRL	RPL3	156	P39023
DVLYRVMRCVTAANQ	SMG1	431	Q96Q15
VNESTVCLMSYERRQ	TENT5D	306	Q8NEK8
SIFCIQYNIRSFMNV	MYH3	811	P11055
VFVCRVSAVLFYVNM	P2RY14	91	Q15391
RYNIIMNRHTCNFVV	OR9A4	131	Q8NGU2
YLMILRRVVNESTVC	TENT5C	306	Q5VWP2
CVIVEVRDYRQSSNM	SUPT20HL2	141	P0C7V6
VVMYCRVYVVARSTT	ADRA1D	271	P25100
IMRNAIVNCAEVVTY	UCP3	186	P55916
VSCSQISIVMVYFQL	TM9SF4	546	Q92544
IHSMRCRNRLYVIQT	TBC1D8B	761	Q0IIM8
IRMCRAFDSQNNTVY	RORA	366	P35398
QVSQAIRYMEFCVNV	VPS18	641	Q9P253
NTLVARSEMVCYFVI	PIEZO2	1916	Q9H5I5
VNCSMSYQRSREQIL	VPS13C	261	Q709C8
CQMSNITVTYRDGRV	SNRPD3	41	P62318
RNDVVYVCRVVSAMI	TGM7	216	Q96PF1
GQTYIRVANCQTVRM	TRRAP	611	Q9Y4A5