Cluster composition

Functions

Category	Name	IntersectionWithQuery	PValue	GenesInTerm	GenesInQuery	GenesInTermInQuery	ID
GeneOntologyMolecularFunction	H3K27me3 modified histone binding	TAF1 TAF1L	8.53e-05	5	59	2	GO:0061628
GeneOntologyMolecularFunction	lysine-acetylated histone binding	TAF1 TAF1L PHIP	9.40e-05	30	59	3	GO:0070577
GeneOntologyMolecularFunction	polysaccharide binding	CLEC18A CLEC18B CLEC18C	1.04e-04	31	59	3	GO:0030247
GeneOntologyMolecularFunction	acetylation-dependent protein binding	TAF1 TAF1L PHIP	1.04e-04	31	59	3	GO:0140033
GeneOntologyMolecularFunction	RNA polymerase I general transcription initiation factor activity	TAF1 TAF1L	3.05e-04	9	59	2	GO:0001181
GeneOntologyMolecularFunction	RNA polymerase II general transcription initiation factor activity	TAF1 TAF2 TAF1L	4.89e-04	52	59	3	GO:0016251
GeneOntologyMolecularFunction	general transcription initiation factor activity	TAF1 TAF2 TAF1L	1.07e-03	68	59	3	GO:0140223
GeneOntologyCellularComponent	endoplasmic reticulum exit site	SEC24B APOB SEC31B	2.38e-04	42	60	3	GO:0070971
GeneOntologyCellularComponent	transcription factor TFIID complex	TAF1 TAF2 TAF1L	3.33e-04	47	60	3	GO:0005669
Domain	TAF_II_230-bd	TAF1 TAF1L	9.15e-06	2	57	2	IPR009067
Domain	TFIID_sub1_DUF3591	TAF1 TAF1L	9.15e-06	2	57	2	IPR022591
Domain	-	TAF1 TAF1L	9.15e-06	2	57	2	1.10.1100.10
Domain	TBP-binding	TAF1 TAF1L	9.15e-06	2	57	2	PF09247
Domain	DUF3591	TAF1 TAF1L	9.15e-06	2	57	2	PF12157
Domain	TAF1_animal	TAF1 TAF1L	9.15e-06	2	57	2	IPR011177
Domain	-	CLEC18A CLEC18B CLEC18C	1.19e-05	15	57	3	3.40.33.10
Domain	CAP	CLEC18A CLEC18B CLEC18C	1.19e-05	15	57	3	PF00188
Domain	CAP_domain	CLEC18A CLEC18B CLEC18C	1.19e-05	15	57	3	IPR014044
Domain	SCP	CLEC18A CLEC18B CLEC18C	1.19e-05	15	57	3	SM00198
Domain	Allrgn_V5/Tpx1	CLEC18A CLEC18B CLEC18C	1.19e-05	15	57	3	IPR001283
Domain	Bromodomain_CS	TAF1 TAF1L PHIP	6.67e-05	26	57	3	IPR018359
Domain	ARM-type_fold	TNPO1 ARVCF SARM1 APOB PPP6R1 TAF2 CTNND1	7.40e-05	339	57	7	IPR016024
Domain	Plakophilin/d_Catenin	ARVCF CTNND1	1.90e-04	7	57	2	IPR028435
Domain	BROMODOMAIN_1	TAF1 TAF1L PHIP	1.95e-04	37	57	3	PS00633
Domain	Bromodomain	TAF1 TAF1L PHIP	2.11e-04	38	57	3	PF00439
Domain	BROMODOMAIN_2	TAF1 TAF1L PHIP	2.65e-04	41	57	3	PS50014
Domain	BROMO	TAF1 TAF1L PHIP	2.84e-04	42	57	3	SM00297
Domain	Bromodomain	TAF1 TAF1L PHIP	2.84e-04	42	57	3	IPR001487
Domain	-	TAF1 TAF1L PHIP	2.84e-04	42	57	3	1.20.920.10
Domain	C-type_lectin_CS	CLEC18A CLEC18B CLEC18C	3.05e-04	43	57	3	IPR018378
Domain	C_TYPE_LECTIN_1	CLEC18A CLEC18B CLEC18C	1.87e-03	80	57	3	PS00615
Domain	Lectin_C	CLEC18A CLEC18B CLEC18C	2.16e-03	84	57	3	PF00059
Domain	CLECT	CLEC18A CLEC18B CLEC18C	2.16e-03	84	57	3	SM00034
Domain	C_TYPE_LECTIN_2	CLEC18A CLEC18B CLEC18C	2.23e-03	85	57	3	PS50041
Domain	C-type_lectin-like	CLEC18A CLEC18B CLEC18C	2.31e-03	86	57	3	IPR001304
Domain	-	CLEC18A CLEC18B CLEC18C	3.24e-03	97	57	3	3.10.100.10
Domain	C-type_lectin-like/link	CLEC18A CLEC18B CLEC18C	3.44e-03	99	57	3	IPR016186
Domain	Arm	ARVCF CTNND1	4.02e-03	31	57	2	PF00514
Domain	CTDL_fold	CLEC18A CLEC18B CLEC18C	4.27e-03	107	57	3	IPR016187
Domain	-	TNPO1 ARVCF SARM1 CTNND1	4.69e-03	222	57	4	1.25.10.10
Domain	EGF_3	CLEC18A CLEC18B CLEC18C NOTCH2	5.73e-03	235	57	4	PS50026
Domain	EGF	CLEC18A CLEC18B CLEC18C NOTCH2	5.73e-03	235	57	4	SM00181
Domain	ARM_REPEAT	ARVCF CTNND1	6.63e-03	40	57	2	PS50176
Domain	ARM	ARVCF CTNND1	6.63e-03	40	57	2	SM00185
Domain	EGF-like_dom	CLEC18A CLEC18B CLEC18C NOTCH2	7.01e-03	249	57	4	IPR000742
Domain	EGF_1	CLEC18A CLEC18B CLEC18C NOTCH2	7.61e-03	255	57	4	PS00022
Domain	WD40	WDR33 SEC31B WDR77 PHIP	8.03e-03	259	57	4	PF00400
Domain	EGF-like_CS	CLEC18A CLEC18B CLEC18C NOTCH2	8.24e-03	261	57	4	IPR013032
Domain	EGF_2	CLEC18A CLEC18B CLEC18C NOTCH2	8.69e-03	265	57	4	PS01186
Domain	WD40	WDR33 SEC31B WDR77 PHIP	9.03e-03	268	57	4	SM00320
Domain	Armadillo	ARVCF CTNND1	9.06e-03	47	57	2	IPR000225
Pubmed	Human CLEC18 Gene Cluster Contains C-type Lectins with Differential Glycan-binding Specificity.	CLEC18A CLEC18B CLEC18C	4.88e-09	3	60	3	26170455
Pubmed	The C-type lectin-like domain superfamily.	CLEC18A CLEC18B CLEC18C	4.88e-09	3	60	3	16336259
Pubmed	Endosomal TLR3 co-receptor CLEC18A enhances host immune response to viral infection.	CLEC18A CLEC18B CLEC18C	4.88e-09	3	60	3	33603190
Pubmed	The mannose receptor mediates uptake of soluble but not of cell-associated antigen for cross-presentation.	CLEC18A CLEC18B CLEC18C	1.95e-08	4	60	3	16709836
Pubmed	Defining the proximal interaction networks of Arf GTPases reveals a mechanism for the regulation of PLD1 and PI4KB.	CDCA3 GGA2 SEC24B UTP14A KDM3B APOB CTNND1 SDK1 NUP160 NOTCH2	8.04e-07	777	60	10	35844135
Pubmed	Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro.	GGA2 KDM3B PPP6R1 ANKHD1 CAMSAP2	1.04e-06	104	60	5	10470851
Pubmed	The TBN protein, which is essential for early embryonic mouse development, is an inducible TAFII implicated in adipogenesis.	TAF1 TAF2 TAF1L	2.19e-06	15	60	3	14580349
Pubmed	Taf1 knockout is lethal in embryonic male mice and heterozygous females show weight and movement disorders.	TAF1 TAF1L	2.93e-06	2	60	2	38804708
Pubmed	DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator.	TAF1 TAF2	2.93e-06	2	60	2	10469661
Pubmed	TAFII250, Egr-1, and D-type cyclin expression in mice and neonatal rat cardiomyocytes treated with doxorubicin.	TAF1 TAF1L	2.93e-06	2	60	2	10070062
Pubmed	Sustained expression of a neuron-specific isoform of the Taf1 gene in development stages and aging in mice.	TAF1 TAF1L	2.93e-06	2	60	2	22842574
Pubmed	Frameshift Mutations in the Mononucleotide Repeats of TAF1 and TAF1L Genes in Gastric and Colorectal Cancers with Regional Heterogeneity.	TAF1 TAF1L	2.93e-06	2	60	2	27571988
Pubmed	Striatal Cholinergic Dysregulation after Neonatal Decrease in X-Linked Dystonia Parkinsonism-Related TAF1 Isoforms.	TAF1 TAF1L	2.93e-06	2	60	2	34403156
Pubmed	Regulated expression of TAF1 in 1-cell mouse embryos.	TAF1 TAF1L	8.77e-06	3	60	2	16822332
Pubmed	Spatiotemporal expression of retrogene-host pair Mcts2/H13 in mouse embryo, and Mcts2 has no influence on H13 transcription pattern in NIH/3T3 cells.	MCTS2 MCTS1	8.77e-06	3	60	2	24063864
Pubmed	Leukocyte trafficking-associated vascular adhesion protein 1 is expressed and functionally active in atherosclerotic plaques.	AOC3 APOB	8.77e-06	3	60	2	27731409
Pubmed	TAFII55 binding to TAFII250 inhibits its acetyltransferase activity.	TAF1 TAF1L	8.77e-06	3	60	2	11592977
Pubmed	Functional substitution for TAF(II)250 by a retroposed homolog that is expressed in human spermatogenesis.	TAF1 TAF1L	8.77e-06	3	60	2	12217962
Pubmed	TAF7: a possible transcription initiation check-point regulator.	TAF1 TAF1L	8.77e-06	3	60	2	16407123
Pubmed	A case-by-case evolutionary analysis of four imprinted retrogenes.	MCTS2 MCTS1	1.75e-05	4	60	2	21166792
Pubmed	ARVCF localizes to the nucleus and adherens junction and is mutually exclusive with p120(ctn) in E-cadherin complexes.	ARVCF CTNND1	1.75e-05	4	60	2	10725230
Pubmed	TAF1 histone acetyltransferase activity in Sp1 activation of the cyclin D1 promoter.	TAF1 TAF2	1.75e-05	4	60	2	15870300
Pubmed	Essential roles for the splicing regulator nSR100/SRRM4 during nervous system development.	ARVCF TAF1 TAF1L	2.12e-05	31	60	3	25838543
Pubmed	N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.	ZFYVE16 SEC24B UTP14A KDM3B TACC2 PPP6R1 CTNND1 ANKHD1 CAMSAP2	3.03e-05	934	60	9	33916271
Pubmed	The nuclear interactome of DYRK1A reveals a functional role in DNA damage repair.	PPP6R1 ANKHD1 CAMSAP2 NOTCH2	3.49e-05	106	60	4	31024071
Pubmed	Comparison of the gene expression profiles from normal and Fgfrl1 deficient mouse kidneys reveals downstream targets of Fgfrl1 signaling.	CLEC18A CLEC18B CLEC18C	3.64e-05	37	60	3	22432025
Pubmed	Cloning and expression of human TAFII250: a TBP-associated factor implicated in cell-cycle regulation.	TAF1 TAF2	4.37e-05	6	60	2	7680771
Pubmed	Transforming growth factor-beta regulates basal transcriptional regulatory machinery to control cell proliferation and differentiation in cranial neural crest-derived osteoprogenitor cells.	TAF1 TAF1L	4.37e-05	6	60	2	19959467
Pubmed	SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.	WDR33 SEC24B KDM3B TAF1 TAF2 CTNND1 ANKHD1	4.40e-05	549	60	7	38280479
Pubmed	Novel Cul3 binding proteins function to remodel E3 ligase complexes.	LRRC7 WDR77 PHIP	4.61e-05	40	60	3	25011449
Pubmed	Proteomic profiling of Myc-associated proteins.	MIPEP CTNND1 SEC31B SDK1	4.63e-05	114	60	4	21150319
Pubmed	E-cadherin interactome complexity and robustness resolved by quantitative proteomics.	CDCA3 ZFYVE16 ARVCF SEC24B LRRC7 CTNND1 NOTCH2	5.28e-05	565	60	7	25468996
Pubmed	Dominant and redundant functions of TFIID involved in the regulation of hepatic genes.	APOB TAF1 TAF1L	5.73e-05	43	60	3	18722179
Pubmed	IRF6 is a mediator of Notch pro-differentiation and tumour suppressive function in keratinocytes.	IRF6 NOTCH2	6.11e-05	7	60	2	21909072
Pubmed	DIPA-family coiled-coils bind conserved isoform-specific head domain of p120-catenin family: potential roles in hydrocephalus and heterotopia.	ARVCF CTNND1	6.11e-05	7	60	2	25009281
Pubmed	Molecular cloning and expression of the 32-kDa subunit of human TFIID reveals interactions with VP16 and TFIIB that mediate transcriptional activation.	TAF1 TAF2	6.11e-05	7	60	2	7597030
Pubmed	Histone recognition and large-scale structural analysis of the human bromodomain family.	TAF1L PHIP	6.11e-05	7	60	2	22464331
Pubmed	Systematically defining selective autophagy receptor-specific cargo using autophagosome content profiling.	TNPO1 ZFYVE16 SEC24B KDM3B APOB TTC13 BSCL2 ANKHD1 NUP160 NOTCH2	6.94e-05	1297	60	10	33545068
Pubmed	NOTCH1 nuclear interactome reveals key regulators of its transcriptional activity and oncogenic function.	TNPO1 VPS39 PPP6R1 NOTCH2	7.50e-05	129	60	4	23022380
Pubmed	Conservation of position and exclusive expression of mouse Xist from the inactive X chromosome.	TAF1 TAF1L	8.14e-05	8	60	2	2034279
Pubmed	Arvcf Dependent Adherens Junction Stability is Required to Prevent Age-Related Cortical Cataracts.	ARVCF CTNND1	8.14e-05	8	60	2	35874813
Pubmed	A screen for retrotransposed imprinted genes reveals an association between X chromosome homology and maternal germ-line methylation.	MCTS2 MCTS1	8.14e-05	8	60	2	17291163
Pubmed	Physical mapping of 2000 kb of the mouse X chromosome in the vicinity of the Xist locus.	TAF1 TAF1L	8.14e-05	8	60	2	8468051
Pubmed	Genetic mapping in the region of the mouse X-inactivation center.	TAF1 TAF1L	8.14e-05	8	60	2	1974879
Pubmed	Deletion of Prl7d1 causes placental defects at mid-pregnancy in mice.	TAF1 TAF1L	8.14e-05	8	60	2	31012985
Pubmed	SEC24A deficiency lowers plasma cholesterol through reduced PCSK9 secretion.	SEC24B APOB	8.14e-05	8	60	2	23580231
Pubmed	The Erbin PDZ domain binds with high affinity and specificity to the carboxyl termini of delta-catenin and ARVCF.	ARVCF CTNND1	8.14e-05	8	60	2	11821434
Pubmed	High-density molecular map of the central span of the mouse X chromosome.	TAF1 TAF1L	8.14e-05	8	60	2	1675191
Pubmed	Essential role of the TFIID subunit TAF4 in murine embryogenesis and embryonic stem cell differentiation.	TAF1 TAF2 TAF1L	9.03e-05	50	60	3	27026076
Pubmed	RNF43 inhibits WNT5A-driven signaling and suppresses melanoma invasion and resistance to the targeted therapy.	CDCA3 ZFYVE16 SEC24B LRRC7 CTNND1	9.26e-05	263	60	5	34702444
Pubmed	Construction of long-transcript enriched cDNA libraries from submicrogram amounts of total RNAs by a universal PCR amplification method.	TNPO1 VPS39 GNG13 RPEL1 UTP14A APOB TACC2 EPDR1 ANKHD1	9.52e-05	1084	60	9	11544199
Pubmed	ALS/FTD-causing mutation in cyclin F causes the dysregulation of SFPQ.	TNPO1 UTP14A CTNND1 ANKHD1 WDR77 NUP160 NOTCH2	9.81e-05	624	60	7	33729478
Pubmed	The TAF10-containing TFIID and SAGA transcriptional complexes are dispensable for early somitogenesis in the mouse embryo.	TAF1 TAF2 TAF1L	1.02e-04	52	60	3	28893950
Pubmed	The intracellular localisation of TAF7L, a paralogue of transcription factor TFIID subunit TAF7, is developmentally regulated during male germ-cell differentiation.	TAF1 TAF1L	1.05e-04	9	60	2	12665565
Pubmed	Cloning and characterization of a new human Xq13 gene, encoding a putative helicase.	TAF1 TAF1L	1.05e-04	9	60	2	7874112
Pubmed	HIV-1 tat binds TAFII250 and represses TAFII250-dependent transcription of major histocompatibility class I genes.	TAF1 TAF1L	1.05e-04	9	60	2	9751712
Pubmed	Hypertonicity-responsive ubiquitin ligase RNF183 promotes Na, K-ATPase lysosomal degradation through ubiquitination of its β1 subunit.	TNPO1 ZFYVE16 SEC24B CTNND1 ANKHD1 NOTCH2	1.24e-04	449	60	6	31732153
Pubmed	The SOX2-interactome in brain cancer cells identifies the requirement of MSI2 and USP9X for the growth of brain tumor cells.	TNPO1 UTP14A PPP6R1 TAF2 CTNND1	1.28e-04	282	60	5	23667531
Pubmed	Genetic and molecular evidence of an X-chromosome deletion spanning the tabby (Ta) and testicular feminization (Tfm) loci in the mouse.	TAF1 TAF1L	1.31e-04	10	60	2	2055107
Pubmed	New nomenclature for chromatin-modifying enzymes.	KDM3B TAF1 TAF1L	1.34e-04	57	60	3	18022353
Pubmed	BioID reveals an ATG9A interaction with ATG13-ATG101 in the degradation of p62/SQSTM1-ubiquitin clusters.	CDCA3 GGA2 ZFYVE16 TACC2 NOTCH2	1.35e-04	285	60	5	34369648
Pubmed	Characterization of a murine gene expressed from the inactive X chromosome.	TAF1 TAF1L	1.59e-04	11	60	2	2034278
Pubmed	Proteomic Analysis Reveals a Role for RSK in p120-catenin Phosphorylation and Melanoma Cell-Cell Adhesion.	CDCA3 GGA2 CTNND1 NOTCH2	1.72e-04	160	60	4	31678930
Pubmed	A High-Density Human Mitochondrial Proximity Interaction Network.	CDCA3 WDR33 SARM1 SEC24B UTP14A MIPEP TACC2 TTC13 PHIP NUP160	2.23e-04	1496	60	10	32877691
Pubmed	Mapping of loci and translocation breakpoints in Xq13: isolation of a conserved locus that maps close to CCG1 in human and mouse.	TAF1 TAF1L	2.26e-04	13	60	2	8012115
Pubmed	Requirement of tissue-selective TBP-associated factor TAFII105 in ovarian development.	TAF1 TAF1L	2.26e-04	13	60	2	11557891
Pubmed	Rps4 maps near the inactivation center on the mouse X chromosome.	TAF1 TAF1L	2.26e-04	13	60	2	1740345
Pubmed	XIST and the mapping of the X chromosome inactivation centre.	TAF1 TAF1L	2.26e-04	13	60	2	1772416
Pubmed	The murine interleukin-2 receptor gamma chain gene: organization, chromosomal localization and expression in the adult thymus.	TAF1 TAF1L	2.26e-04	13	60	2	7805729
Pubmed	Structure of promoter-bound TFIID and model of human pre-initiation complex assembly.	TAF1 TAF2	2.63e-04	14	60	2	27007846
Pubmed	The Hedgehog pathway promotes blood-brain barrier integrity and CNS immune quiescence.	APOB CTNND1	2.63e-04	14	60	2	22144466
Pubmed	Human TFIID binds to core promoter DNA in a reorganized structural state.	TAF1 TAF2	2.63e-04	14	60	2	23332750
Pubmed	Genetic and Proteomic Interrogation of Lower Confidence Candidate Genes Reveals Signaling Networks in β-Catenin-Active Cancers.	TNPO1 ARVCF WDR33 SEC24B UTP14A PPP6R1 CTNND1 CAMSAP2 WDR77	2.71e-04	1247	60	9	27684187
Pubmed	Targeting TRIM37-driven centrosome dysfunction in 17q23-amplified breast cancer.	SEC24B UTP14A CAMSAP2 NOTCH2	2.93e-04	184	60	4	32908313
Pubmed	Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria.	TAF1 TAF2 TAF1L	3.14e-04	76	60	3	22323595
Pubmed	Mutations in the carboxy-terminal domain of TBP affect the synthesis of human immunodeficiency virus type 1 full-length and short transcripts similarly.	TAF1 TAF2	3.46e-04	16	60	2	8764009
Pubmed	Direct interaction of human TFIID with the HIV-1 transactivator tat.	TAF1 TAF2	3.46e-04	16	60	2	8121496
Pubmed	Wild-type and transactivation-defective mutants of human immunodeficiency virus type 1 Tat protein bind human TATA-binding protein in vitro.	TAF1 TAF2	3.46e-04	16	60	2	8680883
Pubmed	A novel LBP-1-mediated restriction of HIV-1 transcription at the level of elongation in vitro.	TAF1 TAF2	3.46e-04	16	60	2	7836461
Pubmed	Novel mechanism and factor for regulation by HIV-1 Tat.	TAF1 TAF2	3.46e-04	16	60	2	7835343
Pubmed	MKRN2 Physically Interacts with GLE1 to Regulate mRNA Export and Zebrafish Retinal Development.	SARM1 TAF1 SDK1 PHIP NOTCH2	3.86e-04	358	60	5	32460013
Pubmed	A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning.	GGA2 MCTS1 SEC24B UTP14A KDM3B PPP6R1 CTNND1 CAMSAP2	3.97e-04	1038	60	8	26673895
Pubmed	Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID.	TAF1 TAF2	4.40e-04	18	60	2	29111974
Pubmed	Phosphorylation on Thr-55 by TAF1 mediates degradation of p53: a role for TAF1 in cell G1 progression.	TAF1 TAF2	4.40e-04	18	60	2	15053879
Pubmed	Role of flanking E box motifs in human immunodeficiency virus type 1 TATA element function.	TAF1 TAF2	4.40e-04	18	60	2	7933101
Pubmed	The Functional Proximal Proteome of Oncogenic Ras Includes mTORC2.	CDCA3 ARVCF APOB TAF2 CTNND1 NOTCH2	4.42e-04	569	60	6	30639242
Pubmed	Cell cycle-dependent phosphorylation regulates RECQL4 pathway choice and ubiquitination in DNA double-strand break repair.	TNPO1 ZFYVE16 MCTS1 UTP14A PPP6R1 CTNND1 ANKHD1 WDR77 NUP160	4.46e-04	1335	60	9	29229926
Pubmed	Transcription factor Foxp3 and its protein partners form a complex regulatory network.	TNPO1 WDR33 UTP14A TAF1 TAF1L	4.48e-04	370	60	5	22922362
Pubmed	Interactomes of Glycogen Synthase Kinase-3 Isoforms.	OTULIN PPP6R1 CTNND1 CAMSAP2	4.75e-04	209	60	4	36779422
Pubmed	Interaction of human immunodeficiency virus type 1 Tat with a unique site of TFIID inhibits negative cofactor Dr1 and stabilizes the TFIID-TFIIA complex.	TAF1 TAF2	4.91e-04	19	60	2	8764062
Pubmed	p120 catenin is required for normal renal tubulogenesis and glomerulogenesis.	ARVCF CTNND1	4.91e-04	19	60	2	21521738
Pubmed	Lost in transcription: molecular mechanisms that control HIV latency.	TAF1 TAF2	4.91e-04	19	60	2	23518577
Pubmed	Functional proteomics mapping of a human signaling pathway.	HIPK3 ZFYVE16 KDM3B GPNMB SDK1 NOTCH2	5.40e-04	591	60	6	15231748
Pubmed	The RepID-CRL4 ubiquitin ligase complex regulates metaphase to anaphase transition via BUB3 degradation.	WDR77 PHIP	5.45e-04	20	60	2	31911655
Pubmed	Function of TAF(II)-containing complex without TBP in transcription by RNA polymerase II.	TAF1 TAF2	5.45e-04	20	60	2	9603525
Pubmed	STAGA recruits Mediator to the MYC oncoprotein to stimulate transcription and cell proliferation.	TAF1 TAF2	5.45e-04	20	60	2	17967894
Pubmed	Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4.	TAF1 TAF2	5.45e-04	20	60	2	17884155
Pubmed	Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme.	TNPO1 TAF1 TAF2 TAF1L WDR77	5.69e-04	390	60	5	17643375
Pubmed	Inactivation of Notch signaling in the renal collecting duct causes nephrogenic diabetes insipidus in mice.	NOTCH2 CA2	6.02e-04	21	60	2	19855135
Pubmed	Spatiotemporal-resolved protein networks profiling with photoactivation dependent proximity labeling.	TNPO1 WDR33 KDM3B WDR77 CA2	6.31e-04	399	60	5	35987950
Cytoband	13q12	KL MIPEP	4.55e-04	24	60	2	13q12
GeneFamily	C-type lectin domain family	CLEC18A CLEC18B CLEC18C	8.50e-05	47	33	3	494
GeneFamily	WD repeat domain containing	WDR33 SEC31B WDR77 PHIP	1.27e-03	262	33	4	362
GeneFamily	Armadillo repeat containing\|Protein phosphatase 1 regulatory subunits	ARVCF CTNND1	2.78e-03	43	33	2	409
Disease	glutamine measurement, amino acid measurement	TNPO1 MIPEP	2.06e-04	11	58	2	EFO_0005134, EFO_0009768
Disease	Intellectual Disability	KDM3B ACTL6B TAF1 TAF2 PHIP CA2	2.43e-04	447	58	6	C3714756
Disease	gamma-glutamylglutamine measurement	TNPO1 MIPEP	8.55e-04	22	58	2	EFO_0021138
Disease	Dupuytren Contracture	TACC2 EPDR1 SDK1	1.27e-03	108	58	3	EFO_0004229
Disease	amyotrophic lateral sclerosis (implicated_via_orthology)	SARM1 ATP13A2	1.59e-03	30	58	2	DOID:332 (implicated_via_orthology)

Protein segments in the cluster

Peptide	Gene	Start	Entry
MTLTQPWDPLDIPQN	EPDR1	116	Q9UM22
PMAWQQLVLQEQSPG	ARVCF	61	O00192
EPNLHPVLMSEAPWN	ACTL6B	111	O94805
TMWQIPQPRQLEVDP	GJA10	301	Q969M2
NIIQMTDVLMPVPWP	GPNMB	391	Q14956
CPQMEWENPNVEPSK	BTBD11	476	A6QL63
FVPMAVPWSPEHQLQ	AOC3	546	Q16853
SVEEQMPPWNQTEFP	CDCA3	131	Q99618
PVPVPADWMNRMEVN	NOTCH2	2246	Q04721
EQFPGIEPWLNQIMP	MCTS1	31	Q9ULC4
EQFPGIEPWLNQIMP	MCTS2	31	A0A3B3IRV3
PWARCDQQIQDMPVP	LRRC7	506	Q96NW7
DMPVPQNDPQLAWGC	LRRC7	516	Q96NW7
PQQSDPDAMNLWIPS	KDM3B	961	Q7LBC6
PQPVWDIMFQVAVPK	GGA2	526	Q9UJY4
PFLNPDLMKNNPWVE	GNG13	46	Q9P2W3
QMLVPAWQQVTPLAP	HIPK3	681	Q9H422
EAIPMPPHWENVNTQ	PARP11	121	Q9NR21
QAVGLPPWLQDPELM	OTULIN	141	Q96BN8
IDQMLNSELQWPVPD	APOB	2676	P04114
PLWEPQLQAMEEPPV	ATP13A2	606	Q9NQ11
QLRPNDQVWVQMPSD	COL8A2	666	P25067
ITPVVALWQPMAPNQ	KL	631	Q9UEF7
MVNDPPVPALLWAQE	BSCL2	1	Q96G97
MTPVWAPVPNLNADL	SEC24B	536	O95487
TNQSIMVQWQPPPET	SDK1	781	Q7Z5N4
QMREQQSWVISPPQP	CAMSAP2	921	Q08AD1
PNWRQPELPEVIAML	CTNND1	361	O60716
EWNLPPNAPACMERQ	WDR77	16	Q9BQA1
QESWQPMQPTPSMQL	IRF6	446	O14896
IIDPNIWNPQPSQMN	FAM83G	431	A6ND36
PNVLLMANVTWPQGP	GARIN1A	91	Q6NXP2
PQFWPTPMAQAEAQA	SPATA31C2	341	B4DYI2
PQQNMSQPEVKDPWN	TAF1L	571	Q8IZX4
EPQQNMSQPEVKDPW	TAF1	551	P21675
ELQWLLNMIQNDPVP	TAF2	906	Q6P1X5
WDINDPQMPQELALF	GCM2	21	O75603
ELVPQNMTPWEIPIT	SEC31B	546	Q9NQW1
TNMPGNIIPWVDNNV	NPTX2	396	P47972
QWNPVFMQPLPEEEI	NUP160	431	Q12769
PEELMVDNWRPAQPL	CA2	236	P00918
PDPAWNPMIKVIQNS	ANKHD1	2501	Q8IWZ3
AEVWPPQLQEQAPMA	CLEC18A	26	A5D8T8
AEVWPPQLQEQAPMA	CLEC18B	26	Q6UXF7
AEVWPPQLQEQAPMA	CLEC18C	26	Q8NCF0
AMPQPVNPQLSAWTI	TRIM77	261	I1YAP6
ADPDQPVLWLDQMPA	TTC13	576	Q8NBP0
PAQDPVKPWQLLENM	TAS1R3	416	Q7RTX0
QELLMVQANPDASPW	TULP2	41	O00295
LNPQNSEVMPWDPPY	MIPEP	346	Q99797
SPWDMELIPNNAVFP	PHIP	1116	Q8WWQ0
PEQWVKPMAVAEANQ	RPEL1	76	Q2QD12
EWPEPQVLPEDMQAV	SARM1	661	Q6SZW1
MTPFWINSPDQVPEQ	PRR19	211	A6NJB7
QPVPAPQQKMECWAT	TACC2	1091	O95359
VVNEVQMNADGPNPW	UTP14A	361	Q9BVJ6
LDQSPCAQPTMPWQD	MPL	206	P40238
PQEVAPMLQQFIRPW	TNPO1	791	Q92973
PPHLQAMVAWVTQEP	PPP6R1	51	Q9UPN7
QAWMQNKVPIPAPNE	WDR33	506	Q9C0J8
QPTWVPDSEAPNCMN	ZFYVE16	741	Q7Z3T8
LNWTDIPVAMEHQPP	VPS39	241	Q96JC1