Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionsodium ion binding

SCN8A SCN9A

1.25e-0414242GO:0031402
GeneOntologyMolecularFunctionvoltage-gated sodium channel activity

SCN8A SCN9A

4.42e-0426242GO:0005248
GeneOntologyMolecularFunctionalkali metal ion binding

SCN8A SCN9A

4.42e-0426242GO:0031420
GeneOntologyMolecularFunctionsodium channel activity

SCN8A SCN9A

1.77e-0352242GO:0005272
GeneOntologyMolecularFunctionbasal RNA polymerase II transcription machinery binding

RTF1 NOLC1

2.83e-0366242GO:0001099
GeneOntologyMolecularFunctionbasal transcription machinery binding

RTF1 NOLC1

2.83e-0366242GO:0001098
GeneOntologyMolecularFunctioncatalytic activity, acting on DNA

BPTF CHD1 REV3L

3.69e-03262243GO:0140097
GeneOntologyMolecularFunctionhistone binding

BPTF CHD1 RNF20

3.81e-03265243GO:0042393
GeneOntologyCellularComponentvoltage-gated sodium channel complex

SCN8A SCN9A

1.70e-0417242GO:0001518
GeneOntologyCellularComponentsodium channel complex

SCN8A SCN9A

5.03e-0429242GO:0034706
HumanPhenoFocal hemiclonic seizure

CUX2 SCN8A SCN9A

1.68e-0525113HP:0006813
HumanPhenoFocal clonic seizure

CUX2 SCN8A SCN9A

8.22e-0542113HP:0002266
MousePhenoabsent anterior visceral endoderm

BPTF CHD1

4.94e-057222MP:0012159
DomainNa_trans_cytopl

SCN8A SCN9A

2.37e-056242PF11933
DomainNa_trans_cytopl

SCN8A SCN9A

2.37e-056242IPR024583
DomainNa_channel_asu

SCN8A SCN9A

7.08e-0510242IPR001696
DomainNa_trans_assoc

SCN8A SCN9A

7.08e-0510242IPR010526
DomainNa_trans_assoc

SCN8A SCN9A

7.08e-0510242PF06512
Domain-

MYCBP2 BPTF KMT2C RNF20 MGRN1

2.29e-044492453.30.40.10
DomainZnf_RING/FYVE/PHD

MYCBP2 BPTF KMT2C RNF20 MGRN1

2.53e-04459245IPR013083
DomainZF_RING_2

MYCBP2 KMT2C RNF20 MGRN1

5.25e-04298244PS50089
DomainRING

MYCBP2 KMT2C RNF20 MGRN1

5.72e-04305244SM00184
DomainZnf_RING

MYCBP2 KMT2C RNF20 MGRN1

7.35e-04326244IPR001841
DomainChannel_four-helix_dom

SCN8A SCN9A

2.42e-0357242IPR027359
Domain-

SCN8A SCN9A

2.42e-03572421.20.120.350
DomainC1

CDC42BPB KMT2C

3.13e-0365242SM00109
DomainPE/DAG-bd

CDC42BPB KMT2C

3.23e-0366242IPR002219
DomainIQ

SCN8A SCN9A

3.73e-0371242PF00612
DomainPHD

BPTF KMT2C

4.15e-0375242PF00628
DomainZnf_PHD-finger

BPTF KMT2C

4.59e-0379242IPR019787
DomainIQ

SCN8A SCN9A

4.82e-0381242SM00015
Domain-

MEIS1 CUX2 SNAPC4

5.50e-032832431.10.10.60
DomainPHD

BPTF KMT2C

5.79e-0389242SM00249
DomainIQ_motif_EF-hand-BS

SCN8A SCN9A

5.92e-0390242IPR000048
DomainZF_RING_1

MYCBP2 RNF20 MGRN1

5.95e-03291243PS00518
DomainZnf_PHD

BPTF KMT2C

6.04e-0391242IPR001965
DomainIQ

SCN8A SCN9A

6.30e-0393242PS50096
DomainZF_PHD_2

BPTF KMT2C

6.57e-0395242PS50016
DomainZF_PHD_1

BPTF KMT2C

6.70e-0396242PS01359
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

RTF1 NOLC1 BPTF CHD1 BTF3L4 THOC5 SMCHD1 RNF20

2.47e-07101424832416067
Pubmed

Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones.

RTF1 MYCBP2 CDC42BPB KMT2C CUX2

4.17e-0722524512168954
Pubmed

Sodium channel slow inactivation interferes with open channel block.

SCN8A SCN9A

4.56e-07224227174182
Pubmed

Dynamic Protein Interactions of the Polycomb Repressive Complex 2 during Differentiation of Pluripotent Cells.

NOLC1 BPTF KMT2C CHD1 SMCHD1 SAP30BP

6.38e-0746924627634302
Pubmed

SETD1A Methyltransferase Is Physically and Functionally Linked to the DNA Damage Repair Protein RAD18.

NOLC1 CDC42BPB BPTF KMT2C SAP30BP

7.15e-0725124531076518
Pubmed

Expression of alternatively spliced sodium channel alpha-subunit genes. Unique splicing patterns are observed in dorsal root ganglia.

SCN8A SCN9A

1.37e-06324215302875
Pubmed

RE-IIBP Methylates H3K79 and Induces MEIS1-mediated Apoptosis via H2BK120 Ubiquitination by RNF20.

MEIS1 RNF20

1.37e-06324226206755
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

MYCBP2 BPTF KMT2C SMCHD1 KLC1 SAP30BP

1.59e-0654924638280479
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

RTF1 NOLC1 BPTF CHD1 SMCHD1 SAP30BP RNF20

3.34e-0698924736424410
Pubmed

Early development of electrical excitability in the mouse enteric nervous system.

SCN8A SCN9A

4.56e-06524222875929
Pubmed

Contactin regulates the current density and axonal expression of tetrodotoxin-resistant but not tetrodotoxin-sensitive sodium channels in DRG neurons.

SCN8A SCN9A

6.83e-06624216029194
Pubmed

A 'toothache tree' alkylamide inhibits Aδ mechanonociceptors to alleviate mechanical pain.

SCN8A SCN9A

6.83e-06624223652591
Pubmed

Proteome-scale mapping of binding sites in the unstructured regions of the human proteome.

CUX2 ASAP1 KLC1 SAP30BP MGRN1

9.88e-0643024535044719
Pubmed

Four enzymes cooperate to displace histone H1 during the first minute of hormonal gene activation.

BPTF KMT2C

1.27e-05824221447625
Pubmed

International Union of Pharmacology. XLVII. Nomenclature and structure-function relationships of voltage-gated sodium channels.

SCN8A SCN9A

1.64e-05924216382098
Pubmed

A PHD finger of NURF couples histone H3 lysine 4 trimethylation with chromatin remodelling.

BPTF CHD1

1.64e-05924216728976
Pubmed

Large-scale mapping of human protein-protein interactions by mass spectrometry.

RTF1 NOLC1 MYCBP2 CDC42BPB KMT2C CHD1 KLC1

1.83e-05128424717353931
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

NOLC1 BPTF KMT2C THOC5 SMCHD1 SAP30BP RNF20

1.93e-05129424730804502
Pubmed

The ubiquitin ligase Uhrf2 is a master regulator of cholesterol biosynthesis and is essential for liver regeneration.

NOLC1 BPTF SMCHD1

2.85e-058624337253089
Pubmed

Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification.

NOLC1 CHD1 BTF3L4 KLC1 RNF20

2.90e-0553824528524877
Pubmed

An integrated genetic, radiation hybrid, physical and transcription map of a region of distal mouse chromosome 12, including an imprinted locus and the 'Legs at odd angles' (Loa) mutation.

CDC42BPB KLC1

3.00e-051224211867214
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

NOLC1 CHD1 BTF3L4 SMCHD1 KLC1 SAP30BP

3.28e-0593424633916271
Pubmed

Regulation of neuronal voltage-gated sodium channels by the ubiquitin-protein ligases Nedd4 and Nedd4-2.

SCN8A SCN9A

3.54e-051324215123669
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

RTF1 BPTF SMCHD1 SAP30BP

4.01e-0528324430585729
Pubmed

SHP-1 dephosphorylates histone H2B to facilitate its ubiquitination during transcription.

RTF1 RNF20

5.44e-051624235938192
Pubmed

RAD6-Mediated transcription-coupled H2B ubiquitylation directly stimulates H3K4 methylation in human cells.

RTF1 RNF20

6.94e-051824219410543
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

NOLC1 MYCBP2 BPTF CHD1 SMCHD1

7.26e-0565324522586326
Pubmed

Menin and Menin-Associated Proteins Coregulate Cancer Energy Metabolism.

NOLC1 BPTF CHD1 SMCHD1

8.26e-0534124432971831
Pubmed

PRISMA and BioID disclose a motifs-based interactome of the intrinsically disordered transcription factor C/EBPα.

NOLC1 MYCBP2 BPTF KMT2C BTF3L4 SMCHD1

8.27e-05110324634189442
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

MYCBP2 CDC42BPB KMT2C REV3L SNAPC4 SCN8A

8.36e-05110524635748872
Pubmed

Conformation-specific binding of alpha-synuclein to novel protein partners detected by phage display and NMR spectroscopy.

KLC1 SAP30BP

1.05e-042224217893145
Pubmed

Gene expression in the developing mouse retina by EST sequencing and microarray analysis.

ASAP1 KLC1 RNF20

1.27e-0414224311812828
Pubmed

Identification of targets for calcium signaling through the copine family of proteins. Characterization of a coiled-coil copine-binding motif.

MYCBP2 CDC42BPB

1.36e-042524212522145
Pubmed

Arf GTPase-activating protein ASAP1 interacts with Rab11 effector FIP3 and regulates pericentrosomal localization of transferrin receptor-positive recycling endosome.

ASAP1 RNF20

1.59e-042724218685082
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

NOLC1 MYCBP2 BPTF SNAPC4 RNF20

1.61e-0477424515302935
Pubmed

Analysis of Ku70 S155 Phospho-Specific BioID2 Interactome Identifies Ku Association with TRIP12 in Response to DNA Damage.

RTF1 SMCHD1 SAP30BP

1.67e-0415624337108203
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

NOLC1 MYCBP2 CHD1 SMCHD1 ASAP1 RNF20

2.52e-04135324629467282
Pubmed

A quantitative telomeric chromatin isolation protocol identifies different telomeric states.

THOC5 SMCHD1

2.53e-043424224270157
Pubmed

A cryptic Tudor domain links BRWD2/PHIP to COMPASS-mediated histone H3K4 methylation.

NOLC1 CHD1

2.83e-043624229089422
Pubmed

A novel role for the peptidyl-prolyl cis-trans isomerase Cyclophilin A in DNA-repair following replication fork stalling via the MRE11-RAD50-NBS1 complex.

RTF1 BPTF CHD1 ASAP1

2.87e-0447224438943005
Pubmed

Assembly of the U5 snRNP component PRPF8 is controlled by the HSP90/R2TP chaperones.

RTF1 NOLC1 CHD1 BTF3L4 SMCHD1 RNF20

3.21e-04141524628515276
Pubmed

Multiplexed kinase interactome profiling quantifies cellular network activity and plasticity.

RTF1 NOLC1 CHD1 KLC1 SAP30BP

3.41e-0491024536736316
Pubmed

A High-Density Map for Navigating the Human Polycomb Complexome.

MYCBP2 BPTF KMT2C SMCHD1

3.44e-0449524427705803
Pubmed

FBXO22 promotes leukemogenesis by targeting BACH1 in MLL-rearranged acute myeloid leukemia.

RTF1 KMT2C SAP30BP SCN9A

3.49e-0449724436774506
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

NOLC1 BPTF SMCHD1 CUX2 SAP30BP SCN9A

3.55e-04144224635575683
Pubmed

RSPO-LGR4 functions via IQGAP1 to potentiate Wnt signaling.

MYCBP2 CDC42BPB SMCHD1

3.57e-0420224324639526
Pubmed

Oct4 links multiple epigenetic pathways to the pluripotency network.

BPTF SMCHD1 SAP30BP

3.62e-0420324322083510
Pubmed

Nuclear actin interactome analysis links actin to KAT14 histone acetyl transferase and mRNA splicing.

RTF1 NOLC1 SAP30BP RNF20

3.73e-0450624430890647
Pubmed

14-3-3 proteins sequester a pool of soluble TRIM32 ubiquitin ligase to repress autoubiquitylation and cytoplasmic body formation.

MYCBP2 RNF20

3.86e-044224223444366
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

NOLC1 MYCBP2 CDC42BPB CHD1 THOC5 KLC1

4.19e-04148724633957083
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

MYCBP2 CDC42BPB BPTF KMT2C BTF3L4 MGRN1

4.22e-04148924628611215
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

NOLC1 BPTF CHD1 SMCHD1 SAP30BP

4.23e-0495424536373674
Pubmed

Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries.

NOLC1 KMT2C SMCHD1 MGRN1

4.42e-0452924414621295
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

NOLC1 BPTF CHD1 SMCHD1

4.54e-0453324430554943
Pubmed

TRIM33 drives prostate tumor growth by stabilizing androgen receptor from Skp2-mediated degradation.

KMT2C SMCHD1 RNF20

4.58e-0422024335785414
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

NOLC1 MYCBP2 BPTF CHD1 SMCHD1

5.84e-04102424524711643
InteractionTERF2IP interactions

RTF1 BPTF CHD1 SMCHD1 SAP30BP RNF20

3.63e-05552246int:TERF2IP
InteractionCEBPA interactions

NOLC1 MYCBP2 BPTF KMT2C CHD1 BTF3L4 THOC5 SMCHD1

6.25e-051245248int:CEBPA
InteractionCSNK2A1 interactions

RTF1 NOLC1 BTF3L4 THOC5 CUX2 SAP30BP SNAPC4

8.99e-05956247int:CSNK2A1
InteractionPAF1 interactions

RTF1 NOLC1 CHD1 RNF20

1.11e-04214244int:PAF1
InteractionBRD2 interactions

RTF1 NOLC1 BPTF SMCHD1 SAP30BP

1.30e-04429245int:BRD2
InteractionSCN11A interactions

SCN8A SCN9A

1.41e-0415242int:SCN11A
InteractionCTR9 interactions

RTF1 CHD1 SNAPC4 RNF20

1.54e-04233244int:CTR9
InteractionHDAC1 interactions

NOLC1 MYCBP2 BPTF CHD1 THOC5 KLC1 RNF20

2.26e-041108247int:HDAC1
InteractionPOLR1G interactions

RTF1 NOLC1 BPTF CHD1 SMCHD1

2.39e-04489245int:POLR1G
InteractionBRD3 interactions

NOLC1 BPTF CHD1 SMCHD1 SAP30BP

2.51e-04494245int:BRD3
Cytoband14q32.3

CDC42BPB KLC1

1.18e-051024214q32.3
CytobandEnsembl 112 genes in cytogenetic band chr18p11

TXNDC2 SMCHD1

5.38e-03210242chr18p11
GeneFamilySodium voltage-gated channel alpha subunits

SCN8A SCN9A

2.00e-0591421203
GeneFamilyPHD finger proteins

BPTF KMT2C

2.14e-039014288
GeneFamilyRing finger proteins

RNF20 MGRN1

1.86e-0227514258
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HDA2

MYCBP2 RCAN2 KLC1 REV3L SCN8A SCN9A

5.44e-06513246M39069
CoexpressionHAMAI_APOPTOSIS_VIA_TRAIL_UP

MYCBP2 BPTF CHD1 SMCHD1 REV3L RNF20

2.20e-05656246M18979
CoexpressionZHONG_PFC_C3_ASTROCYTE

CDC42BPB BPTF SNAPC4 SCN9A MGRN1

2.36e-05389245M39102
CoexpressionGSE27291_0H_VS_7D_STIM_GAMMADELTA_TCELL_DN

BPTF KMT2C SMCHD1 SCN9A

2.54e-05190244M8457
CoexpressionGSE20727_CTRL_VS_H2O2_TREATED_DC_DN

MYCBP2 CDC42BPB BTF3L4 RNF20

2.87e-05196244M9243
CoexpressionGSE40655_FOXO1_KO_VS_WT_NTREG_UP

NOLC1 MYCBP2 KMT2C SNAPC4

3.10e-05200244M9439
CoexpressionBUSSLINGER_GASTRIC_IMMUNE_CELLS

MYCBP2 BPTF KMT2C CHD1 SMCHD1 ASAP1 KLC1 REV3L

3.50e-051492248M40023
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_COMMON_DN

MYCBP2 BPTF CHD1 SMCHD1 REV3L

5.59e-05466245M13522
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

MYCBP2 BPTF CHD1 SMCHD1 KLC1 REV3L

9.69e-05856246M4500
CoexpressionGABRIELY_MIR21_TARGETS

RTF1 MYCBP2 MEIS1 REV3L

1.29e-04289244M2196
CoexpressionDAZARD_RESPONSE_TO_UV_NHEK_DN

BPTF CHD1 MEIS1 REV3L

1.49e-04300244M8702
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HDA1

RCAN2 KLC1 REV3L SCN8A SCN9A

1.61e-04584245M39068
CoexpressionGSE40274_FOXP3_VS_FOXP3_AND_HELIOS_TRANSDUCED_ACTIVATED_CD4_TCELL_DN

CHD1 REV3L SNAPC4

2.96e-04143243M9149
CoexpressionMANNO_MIDBRAIN_NEUROTYPES_HNBGABA

MYCBP2 KLC1 REV3L SCN8A SCN9A

3.81e-04703245M39070
CoexpressionACEVEDO_NORMAL_TISSUE_ADJACENT_TO_LIVER_TUMOR_UP

MYCBP2 CHD1 CUX2

5.16e-04173243M2480
CoexpressionGSE16385_IFNG_TNF_VS_ROSIGLITAZONE_STIM_MACROPHAGE_UP

CDC42BPB CHD1 SAP30BP

6.38e-04186243M8012
CoexpressionGSE11057_EFF_MEM_VS_CENT_MEM_CD4_TCELL_DN

MYCBP2 BPTF ASAP1

6.68e-04189243M3112
CoexpressionBOYAULT_LIVER_CANCER_SUBCLASS_G3_UP

ASAP1 KLC1 SAP30BP

6.78e-04190243M18436
CoexpressionGSE4984_UNTREATED_VS_GALECTIN1_TREATED_DC_UP

CHD1 ASAP1 RCAN2

6.89e-04191243M6495
CoexpressionGSE46606_IRF4_KO_VS_WT_CD40L_IL2_IL5_3DAY_STIMULATED_BCELL_DN

KMT2C SMCHD1 REV3L

7.31e-04195243M9824
CoexpressionGSE20727_DNFB_ALLERGEN_VS_ROS_INH_AND_DNFB_ALLERGEN_TREATED_DC_UP

GCNA CDC42BPB ASAP1

7.42e-04196243M9241
CoexpressionGSE37416_0H_VS_12H_F_TULARENSIS_LVS_NEUTROPHIL_UP

GCNA THOC5 MGRN1

7.53e-04197243M5347
CoexpressionGSE32986_CURDLAN_LOWDOSE_VS_GMCSF_AND_CURDLAN_LOWDOSE_STIM_DC_DN

MYCBP2 ASAP1 SNAPC4

7.64e-04198243M8628
CoexpressionGSE17721_0.5H_VS_12H_LPS_BMDC_UP

NOLC1 MYCBP2 SAP30BP

7.64e-04198243M4067
CoexpressionGSE13411_IGM_MEMORY_BCELL_VS_PLASMA_CELL_UP

BPTF CHD1 MGRN1

7.64e-04198243M3249
CoexpressionGSE24671_CTRL_VS_SENDAI_VIRUS_INFECTED_MOUSE_SPLENOCYTES_DN

NOLC1 KMT2C SNAPC4

7.76e-04199243M9443
CoexpressionGSE22527_ANTI_CD3_INVIVO_VS_UNTREATED_MOUSE_TREG_UP

CDC42BPB CUX2 KLC1

7.76e-04199243M7710
CoexpressionGSE33425_CD161_INT_VS_NEG_CD8_TCELL_DN

MYCBP2 CHD1 KLC1

7.87e-04200243M8543
CoexpressionGSE7548_NAIVE_VS_DAY7_PCC_IMMUNIZATION_CD4_TCELL_UP

NOLC1 REV3L MGRN1

7.87e-04200243M6836
CoexpressionGSE20366_EX_VIVO_VS_DEC205_CONVERSION_DN

CHD1 SMCHD1 REV3L

7.87e-04200243M4318
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_top-relative-expression-ranked_1000

MYCBP2 BPTF CHD1 MEIS1 ASAP1 REV3L SCN8A MGRN1

1.61e-06795248gudmap_developingKidney_e15.5_anlage of loop of Henle_1000
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_1000

MYCBP2 BPTF CHD1 ASAP1 REV3L MGRN1

3.19e-06379246gudmap_developingKidney_e15.5_1000_k3
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_top-relative-expression-ranked_500

MYCBP2 CHD1 ASAP1 REV3L SCN8A MGRN1

4.47e-06402246gudmap_developingKidney_e15.5_anlage of loop of Henle_500
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500_K3

NOLC1 BPTF CHD1 BTF3L4 SMCHD1 REV3L SCN8A RNF20

4.62e-051257248facebase_RNAseq_e10.5_Emin_LatNas_2500_K3
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_k-means-cluster#4_top-relative-expression-ranked_1000

MYCBP2 CHD1 ASAP1 REV3L MGRN1

6.11e-05385245gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000_k4
CoexpressionAtlasDevelopingKidney_e15.5_anlage of loop of Henle_emap-31283_k-means-cluster#3_top-relative-expression-ranked_500

MYCBP2 CHD1 REV3L MGRN1

7.14e-05201244gudmap_developingKidney_e15.5_500_k3
CoexpressionAtlasDevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_top-relative-expression-ranked_500

MYCBP2 MEIS1 CUX2 REV3L MGRN1

8.41e-05412245gudmap_developingKidney_e15.5_Pelvic Mesenchyme_500
CoexpressionAtlasfacebase_RNAseq_e10.5_Emin_LatNas_2500

NOLC1 BPTF CHD1 BTF3L4 SMCHD1 REV3L SCN8A RNF20

1.32e-041459248facebase_RNAseq_e10.5_Emin_LatNas_2500
CoexpressionAtlasDevelopingKidney_e15.5_Ureteral Smooth Musc_emap-28812_top-relative-expression-ranked_1000

MYCBP2 CHD1 MEIS1 CUX2 REV3L MGRN1

1.74e-04772246gudmap_developingKidney_e15.5_Ureteral Smooth Musc_1000
CoexpressionAtlasDevelopingKidney_e15.5_cortic collect duct_emap-28132_top-relative-expression-ranked_1000

MYCBP2 CHD1 CUX2 REV3L SCN8A MGRN1

1.76e-04774246gudmap_developingKidney_e15.5_cortic collect duct_1000
CoexpressionAtlasDevelopingKidney_e15.5_stage III -IV renal corpusc_emap-27945_k-means-cluster#4_top-relative-expression-ranked_500

MYCBP2 REV3L MGRN1

2.27e-04106243gudmap_developingKidney_e15.5_stage III -IV renal corpusc_500_k4
CoexpressionAtlasDevelopingLowerUrinaryTract_e14.5_ urogenital sinus_emap-5517_top-relative-expression-ranked_1000

MYCBP2 CHD1 CUX2 ASAP1 REV3L MGRN1

2.38e-04818246gudmap_developingLowerUrinaryTract_e14.5_ urogenital sinus_1000
CoexpressionAtlasDevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_k-means-cluster#3_top-relative-expression-ranked_500

MYCBP2 REV3L MGRN1

2.96e-04116243gudmap_developingKidney_e15.5_Pelvic Mesenchyme_500_k3
CoexpressionAtlasDevelopingLowerUrinaryTract_e15.5_Urothelium_emap-28091_k-means-cluster#3_top-relative-expression-ranked_500

MYCBP2 REV3L SCN8A

3.43e-04122243gudmap_developingLowerUrinaryTract_e15.5_Urothelium_500_k3
CoexpressionAtlasFacebaseRNAseq_e9.5_Mandibular Arch_top-relative-expression-ranked_2500_k-means-cluster#2

RTF1 MYCBP2 BPTF SMCHD1 RNF20

3.63e-04564245Facebase_RNAseq_e9.5_Mandibular Arch_2500_K2
CoexpressionAtlasDevelopingKidney_e15.5_stage III -IV renal corpusc_emap-27945_k-means-cluster#1_top-relative-expression-ranked_200

MYCBP2 REV3L

5.58e-0431242gudmap_developingKidney_e15.5_stage III -IV renal corpusc_200_k1
CoexpressionAtlasDevelopingKidney_e15.5_cortic collect duct_emap-28132_k-means-cluster#4_top-relative-expression-ranked_1000

MYCBP2 CHD1 REV3L MGRN1

7.69e-04375244gudmap_developingKidney_e15.5_cortic collect duct_1000_k4
CoexpressionAtlasDevelopingKidney_e15.5_Pelvic Mesenchyme_emap-8241_k-means-cluster#5_top-relative-expression-ranked_500

MEIS1 CUX2

8.40e-0438242gudmap_developingKidney_e15.5_Pelvic Mesenchyme_500_k5
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

MYCBP2 BPTF KMT2C CHD1 SMCHD1

6.55e-0820024512f1685ce8f218433068e090c9d839cd5a1910bf
ToppCellCOVID-19|World / Disease, condition lineage and cell class

MYCBP2 BPTF KMT2C CHD1 SMCHD1

6.55e-082002457dec470c379cd89f05a0f37c8628b21f136e52f0
ToppCelldroplet-Marrow-nan-3m-Myeloid-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 CHD1 SMCHD1 ASAP1

2.58e-06182244f8c73baaaca145e2efc48f10f636feb79c8fc779
ToppCelldroplet-Marrow-nan-3m-Myeloid|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 CHD1 SMCHD1 ASAP1

2.76e-061852447adfa929930cfa795cbfbd9f1a0b439e08aa765d
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 CUX2 RCAN2 REV3L

3.40e-061952444f70157d42a16ff0259bc24a62803c4df4285c44
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-high_collagen-matrisome_fibroblast-|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 CUX2 RCAN2 REV3L

3.40e-06195244803f714d91f2d97ecbee8c15a5139fd9310f66c7
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2 REV3L

3.47e-061962442b36b9a40fe415917afccff99ad9c3474e087d0d
ToppCell(11)_FOXN4+-(2)_GFP_FOXI1|(11)_FOXN4+ / shred by cell type by condition

RTF1 MYCBP2 BPTF CHD1

3.61e-0619824476d40b8c2f8399725b3a62ee2ae0896559cf91eb
ToppCellLPS_only-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_only / Treatment groups by lineage, cell group, cell type

MYCBP2 MEIS1 RCAN2 REV3L

3.76e-06200244a7ef7022b8efcaedb7319b0b43d8c4e99d788fe2
ToppCell10x5'-bone_marrow-Lymphocytic_T_CD4-T_CD4/CD8|bone_marrow / Manually curated celltypes from each tissue

KMT2C CHD1 SMCHD1

7.84e-051562431545169694f686d28648a68b552c2ae606599d66
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

9.26e-05165243cd8de98af8a1a8a6c81d71fae807cc07f319f4c9
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte-|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

9.26e-051652434f83ac71efc57be3668d8db1e62bad05dc6a5e2b
ToppCelldroplet-Spleen-nan-18m|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 CHD1 SMCHD1

1.24e-04182243eeb5dfa4539e9ca5220f26bc2b65717ddcf13b6c
ToppCelldroplet-Spleen-nan-18m-Lymphocytic|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 CHD1 SMCHD1

1.26e-0418324328cbf909424f3be4491d49832f0aca0386560814
ToppCelldroplet-Spleen-nan-18m-Lymphocytic-nan|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 CHD1 SMCHD1

1.26e-041832433fa608aa6b119869ec3280dc388dfee57160e63a
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Myocytic_interstitial_cell|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.26e-04183243667717366cb181b8a04a347e64f0f5a4dfc6ee7f
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Glutamatergic_Excit-Glut_C-D_(RORB)-Glut_C_(IT_L4_RORB)|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

CUX2 RCAN2 SCN9A

1.28e-041842436475a43201b136dcc9b113d2ca4cfa154ed9d65d
ToppCelldroplet-Marrow-nan-3m|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 CHD1 SMCHD1

1.28e-041842431154a5ad7b8512272b7476f949ddac350910bfb7
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.30e-041852437092436b4db90289516ed130ade596e3021cffaf
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.30e-04185243a8ca7819066d5297ef6966e7f3e2c9f8a7673fdc
ToppCell3'-Broncho-tracheal-Immune_Lymphocytic-Lymphocytic_B-B_cell-B_cells-B_cells_L.1.5.0.1|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

MYCBP2 CHD1 SMCHD1

1.30e-04185243e913c64f9b4873443d88dce270f0b7b6d1b4cbce
ToppCelldroplet-Bladder-nan|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RTF1 MYCBP2 CHD1

1.34e-04187243663991a8afe652e92363b64bcbd68c14d0307f0e
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4-T_CD4/CD8|GI_small-bowel / Manually curated celltypes from each tissue

KMT2C CHD1 SMCHD1

1.36e-04188243ab9b725d6e0cdab8e9ddda6dee09e14730e9a578
ToppCelldroplet-Tongue-nan|Tongue / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RTF1 BPTF CHD1

1.36e-04188243d62cc37e86b7b186e53aeb7f421c4e5ee28f23bd
ToppCelldroplet-Kidney-nan-21m-Epithelial-kidney_mesangial_cell|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MEIS1 RCAN2 SCN9A

1.41e-041902431803b1e7c36285f9eaabc3c6e9a9752c5908db3d
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.43e-041912437b0d42a877540dbb346a76a62403e0d5d3e07fa6
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

MEIS1 ASAP1 REV3L

1.43e-0419124308720998aa55131d7377c4c67c4c935865bd7d79
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Mesenchymal-Myocytic_interstitial_cell-Vascular_Smooth_Muscle_Cell_/_Pericyte-|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.43e-04191243cd854b9c426924fdc84bf7f411f6dea447143e79
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

KMT2C CHD1 SMCHD1

1.45e-0419224347646d7e4990be85072987f92bf18d52f8da752e
ToppCellLPS_only-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MEIS1 RCAN2 REV3L

1.45e-04192243df1545670370fb1010c567cd059c2783eab315f7
ToppCellLA-14._Fibroblast_III|LA / Chamber and Cluster_Paper

CHD1 MEIS1 REV3L

1.47e-041932437426c291bac59e539c427bcaae18abc7d397d44e
ToppCellNeuron-Postmitotic-Inhibitory_Neuron-MGE2|World / Primary Cells by Cluster

RCAN2 REV3L SCN9A

1.49e-04194243b42fd64b0fb95434a9e4e6586f31d26114a4074b
ToppCellNeuron-Postmitotic-Inhibitory_Neuron-MGE2-10|World / Primary Cells by Cluster

RCAN2 REV3L SCN9A

1.49e-0419424381e7bc6516ab8d02ccd1c76a56a3533b788c27c8
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.49e-0419424390efdbd7f1c85fd7fd622b10340250b1d8fc1197
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast-|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.49e-04194243df82cce5ebeb73740b02cf816c6df82253cfd566
ToppCell3'-GW_trimst-1-SmallIntestine-Neuronal-neurons_A-Branch_A3_(IPAN/IN)|GW_trimst-1 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

CUX2 RCAN2 SCN9A

1.52e-041952435a6a5048af638872700b76b7c71a8fa3fb8d3772
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 KMT2C REV3L

1.52e-041952437796ea9247f4c63762f0de8490fed08b9717fa23
ToppCelldroplet-Pancreas-PANCREAS-30m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MYCBP2 KMT2C REV3L

1.52e-041952433e519cffa6144a62b06124642a14c9ff39b76554
ToppCellBrain_organoid-organoid_Paulsen_bioRxiv-1_mon-Neuronal-Subcortical|1_mon / Sample Type, Dataset, Time_group, and Cell type.

MEIS1 KLC1 SCN9A

1.54e-04196243bf8fe28193348342987d361c8e8b9e1d6d542678
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 CUX2 RCAN2

1.56e-04197243b349f8e96d61a4c296af64711e11fc44459a9413
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

KMT2C CHD1 SMCHD1

1.56e-041972435c33454b10023decd2f5ccda9229b6512659711e
ToppCellrenal_medulla_nuclei-CKD+DKD_normotensive-Mesenchymal|CKD+DKD_normotensive / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 ASAP1 RCAN2

1.56e-0419724380e153790cef37b743e22a7370ff5b3a6abf147d
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Mesenchymal-Fibroblast-Collagen-low_Matrisome-low_fibroblast-|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 CUX2 RCAN2

1.56e-04197243c2e390653d5dee7e731c1840cfdab41987dede9b
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

KMT2C CHD1 SMCHD1

1.59e-0419824344417089b62056269cac38d3134ff209c05b7007
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

KMT2C CHD1 SMCHD1

1.59e-0419824328ef3fc4c17dcb765537b75917f7db78baa522db
ToppCell(02)_MMP9/10+-(2)_GFP_FOXI1|(02)_MMP9/10+ / shred by cell type by condition

RTF1 BPTF REV3L

1.61e-0419924318a7f9ced4364f45b184bd529f32ef02c27779d3
ToppCellLPS_only-Mesenchymal_fibroblastic-Fibroblasts-Activated_MatrixFB|LPS_only / Treatment groups by lineage, cell group, cell type

MYCBP2 MEIS1 REV3L

1.61e-04199243fde2b65afde69f402f1b7b056eaa266e9fd5b227
ToppCellLPS_IL1RA-Mesenchymal_fibroblastic-Fibroblasts-MatrixFB|LPS_IL1RA / Treatment groups by lineage, cell group, cell type

MYCBP2 MEIS1 REV3L

1.61e-04199243a7dd94b172c973a131a6792f8ccd9bfe44d984ac
ToppCellLPS_only-Mesenchymal_fibroblastic-Fibroblasts|LPS_only / Treatment groups by lineage, cell group, cell type

MYCBP2 MEIS1 REV3L

1.61e-041992431a0add79f4e34078b3475eb11c85a4234bda197c
ToppCell(03)_KRT6B+-(2)_GFP_FOXI1|(03)_KRT6B+ / shred by cell type by condition

RTF1 BPTF REV3L

1.61e-04199243c425e7975f492ed5cfcca022248adb627e1d27d4
ToppCellLPS_IL1RA_TNF-Mesenchymal_fibroblastic-Fibroblasts-Activated_MatrixFB|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

MEIS1 RCAN2 REV3L

1.61e-04199243e1849505b92820a219c5a2c35492bdd55579fb48
ToppCellLPS_only-Mesenchymal_fibroblastic|LPS_only / Treatment groups by lineage, cell group, cell type

MYCBP2 MEIS1 REV3L

1.61e-04199243211c3a08f2d484ab7a3368006767289088f0d957
ToppCellBrain_organoid-organoid_Tanaka_cellReport-1m-Neuronal|1m / Sample Type, Dataset, Time_group, and Cell type.

RCAN2 KLC1 SCN9A

1.63e-04200243418821561c8949ed96c07f9bea3aabc287c04ff1
ToppCellNeuronal|World / cells hierarchy compared to all cells using T-Statistic

RTF1 MYCBP2 SCN8A

1.63e-0420024348d801219bc771d6c7e151dc88ca4c179988de85
ToppCellVE|World / Condition, Cell_class and T cell subcluster

MYCBP2 BPTF SMCHD1

1.63e-042002438ae7cb81de3ffac5acdf3466d4b516d80cac95d3
ToppCellBrain_organoid-organoid_Tanaka_cellReport-1m-Neuronal-Cortical_neuron|1m / Sample Type, Dataset, Time_group, and Cell type.

RCAN2 KLC1 SCN9A

1.63e-042002430185b4ad6b512d24efff806460ee1b57e42096e9
ToppCellControl_saline-Endothelial-Endothelial-Activated_Alv_Cap|Control_saline / Treatment groups by lineage, cell group, cell type

SMCHD1 KLC1 SCN9A

1.63e-04200243be55cef682ba87250dad97689332c8820b3a7420
ToppCellTCGA-Ovary-Primary_Tumor|TCGA-Ovary / Sample_Type by Project: Shred V9

RTF1 CDC42BPB

1.47e-0310624214f548be39cec604fbdae0382cbf434fa4049840
ToppCellTCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma|TCGA-Ovary / Sample_Type by Project: Shred V9

RTF1 CDC42BPB

1.47e-03106242939b80950d39cdc7149a05fdfb64c8810064cdb1
ToppCellTCGA-Ovary-Primary_Tumor-Ovarian_Carcinoma-Serous_Cystadenocarcinoma|TCGA-Ovary / Sample_Type by Project: Shred V9

RTF1 CDC42BPB

1.47e-03106242e9e1b55f32b3d5b9eeec94a997912e5c21c1fb48
ToppCellParenchymal-10x3prime_v2-Immune_Myeloid-Dendritic_cell-DC_plasmacytoid|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

CUX2 SCN9A

2.33e-031342420e3f37ef041b751ed45060b5ce39385a2731370b
ToppCellTCGA-Peripheral_Nervous_System-Primary_Tumor-Paraganglioma-Paraganglioma-3|TCGA-Peripheral_Nervous_System / Sample_Type by Project: Shred V9

ASAP1 SCN8A

2.36e-03135242ac20133d4a36f48338b45bffb13e842cb66f83ad
ToppCellfacs-Marrow-B-cells-3m-Myeloid-granulocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCN8A SCN9A

2.43e-031372424dcb15de821439011df1bb0bbd7682d674bd725d
ToppCellfacs-Marrow-B-cells-3m-Myeloid-granulocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

SCN8A SCN9A

2.43e-03137242c05ceeb7b483324604cb3f647d2da2b3786071b1
ToppCell(08)_Brush+PNEC-(2)_GFP_FOXI1|(08)_Brush+PNEC / shred by cell type by condition

RTF1 BPTF

2.47e-03138242817e3f639604ea95adae01e8685ffaa2e0aff7a8
ToppCellSmart-seq2-tissue-resident_(Smart-seq2)-lymphocytic-T_lymphocytic-CD4-positive,_alpha-beta_memory_T_cell|tissue-resident_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

SMCHD1 RCAN2

2.50e-031392427c02caed5b9baf233bd6fb9a453708b3e157c790
ToppCellCTRL-Lymphoid-pDC|CTRL / Disease state, Lineage and Cell class

CUX2 SCN9A

2.50e-03139242bbc10812b0c5b8c85e78171c12316becde8895c3
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Collecting_tubule_epithelial_cell-kidney_collecting_duct_intercalated_cell-Intercalated_Cell_Type_B|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

RCAN2 SCN9A

2.75e-03146242ec1f793409d1a81c0f9323eb3c82ffe01dae0e44
ToppCell10x_3'_v3-lymph_node_(10x_3'_v3)-myeloid-myeloid_dendritic-plasmacytoid_dendritic_cell|lymph_node_(10x_3'_v3) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

CUX2 SCN9A

2.75e-03146242bee5074c29b132180d35f57d307e342efa9b8cd1
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW19-Neuronal-Cortical_neuron|GW19 / Sample Type, Dataset, Time_group, and Cell type.

CUX2 KLC1

2.83e-03148242a1269312903fc27830c1835dabf660c659a711be
ToppCellIonocyte|World / shred by cell class for nasal brushing

RCAN2 SCN9A

3.06e-031542426b78fb0c96fc7b5e901c39b3424f4aa8d0a6b9cf
ToppCell343B-Lymphocytic-NK_cells-NK_cell_B0|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

KLC1 SCN9A

3.10e-03155242583cfaa41c755c63aee312eb442e9d97f645d5f7
ToppCellEntopeduncular-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Junb_(Mural,_IEG+)-|Entopeduncular / BrainAtlas - Mouse McCarroll V32

NOLC1 SMCHD1

3.14e-031562425df19a235843829f5a1a90ca21b0964ef8b4e115
ToppCellEntopeduncular-Endothelial-MURAL-M1(Rgs5Acta2)-M1_1-MURAL_Mural.Rgs5Acta2.Junb_(Mural,_IEG+)|Entopeduncular / BrainAtlas - Mouse McCarroll V32

NOLC1 SMCHD1

3.14e-03156242029ba0832ee9c4a2c85620e4df2260e02d86b45c
ToppCellPND03-Immune-Immune_Myeloid-Monocytic-Macrophage-iMON-iMON_prolif|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

SMCHD1 SNAPC4

3.18e-03157242eea53cf8d8a607264e1ee00b7a97c94bcf2ac80d
ToppCellIPF-Epithelial-Ionocyte|Epithelial / Disease state, Lineage and Cell class

TXNDC2 RCAN2

3.21e-0315824267adf625a959444762d32268b3b7441f6f8b3b8c
ToppCellControl-Stromal-Pericyte|Stromal / Disease state, Lineage and Cell class

ASAP1 RCAN2

3.25e-031592426f50c381cd8a26a5a90bf0ce909713cea96910d7
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-high_Fibroblast-|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 KLC1

3.25e-03159242cbb331eb689d8cea9e1146ba85e0a05d23301c47
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Mesenchymal-Fibroblast-Collagen-high_Fibroblast|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

MEIS1 KLC1

3.25e-03159242330ecbba97d47bc818a5e8d1d84b05d056bd831e
ToppCellTCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma-3|TCGA-Skin / Sample_Type by Project: Shred V9

ASAP1 REV3L

3.25e-03159242fb222c42f66901852b01cec073ec0732245ee973
ToppCell5'-Adult-Appendix-Hematopoietic-T_cells-TRGV5/7_gdT|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

THOC5 KLC1

3.25e-03159242006076bac619bf14a4c98f1158ac336bd9908914
ToppCellIPF-Epithelial-Ionocyte|IPF / Disease state, Lineage and Cell class

RCAN2 SCN9A

3.29e-03160242d65d19f4fae60836bfd4303a1bb7de34e9d83e35
ToppCellCOVID_non-vent-Lymphocytic-Dendritic-pDC|COVID_non-vent / Disease condition, Lineage, Cell class and subclass

CUX2 SCN9A

3.29e-0316024261f4cb4eb4313d8318aadbb99595a6cb7fd919f7
ToppCellCOVID_non-vent-Lymphocytic-Dendritic|COVID_non-vent / Disease condition, Lineage, Cell class and subclass

CUX2 SCN9A

3.29e-0316024234b4f710cfcb6ec370b8b074f3cbfe272f392cec
ToppCellIPF-Epithelial-Ionocyte|World / Disease state, Lineage and Cell class

RCAN2 SCN9A

3.34e-03161242f1cd5c938cdc08ad8995371b72493850a6cf277a
ToppCellLAM-Lymphoid-pDC|LAM / Condition, Lineage and Cell class

CUX2 SCN9A

3.34e-03161242bb5b44713e4da4406cdaa79dcf2aa9f97e3cf75a
ToppCell3'-Distal_airway-Epithelial-Neuro-endocrine/ionocytic|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

RCAN2 SCN9A

3.38e-0316224240265af9b36fd144a8577b8dacccd4fc0888a593
ToppCellfacs-Heart-RA-3m-Mesenchymal-atrial_cardiomyocyte|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CUX2 RCAN2

3.38e-03162242593939be9d38690c89c31d4c58e351de26cbf9ab
ToppCell3'-Distal_airway-Epithelial-Neuro-endocrine/ionocytic-ionocyte-Ionocyte|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

RCAN2 SCN9A

3.38e-031622429522af31f6b2f3cb81b6b84bd08353eea504d1d6
ToppCell3'-Distal_airway-Epithelial-Neuro-endocrine/ionocytic-ionocyte|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

RCAN2 SCN9A

3.38e-031622429a18286e361e1dd18e6f943ce27db58b199fb6e4
ToppCellfacs-Heart-RA-3m-Mesenchymal-atrial_myocyte|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CUX2 RCAN2

3.38e-031622423a61eda548afa2a41bdf6293d1050103dc210e52
ToppCellChildren_(3_yrs)-Immune-dendritic_cell-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

CUX2 SCN9A

3.38e-0316224286a0b9dabd150dc993bfc0f3344804de7f8e4042
ToppCell3'-Distal_airway-Epithelial-Neuro-endocrine/ionocytic-ionocyte-Ionocyte-Ionocyte_L.0.7.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

RCAN2 SCN9A

3.38e-031622423395e4dffdb9304d157c325e1fc0f12b433c7bd3
ToppCellControl-Epithelial-Ionocyte|World / Disease state, Lineage and Cell class

MEIS1 SCN9A

3.38e-03162242e3b9b46ce2faff7d099502df14bbf51e9f183f8c
ToppCellControl-Epithelial-Ionocyte|Control / Disease state, Lineage and Cell class

MEIS1 SCN9A

3.42e-03163242bf09fa39bf3e6b3a776d5e79c30c96df572956a3
ToppCell343B-Lymphocytic-CD8+_Cytotoxic_T-cell-CD8+_Cytotoxic_T_cell_0|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

MEIS1 SNAPC4

3.42e-031632420ab043b68e8739adcedda01165a3758cd0d22728
ToppCell367C-Myeloid-Monocyte-CD16+_Monocyte|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

GCNA THOC5

3.46e-031642421aff83fc73b4e41e6f0d4b04dbca153bcc7a3518
ToppCellURO-Lymphocyte-T_NK-MAIT|URO / Disease, Lineage and Cell Type

RCAN2 SCN8A

3.46e-03164242cb42a70433b3968caca67f7aa98ea536cd90a0bc
ToppCell10x5'-lymph-node_spleen-Hematopoietic_progenitors-Progenitor|lymph-node_spleen / Manually curated celltypes from each tissue

MEIS1 SCN9A

3.50e-031652427b992843bd8ef92a7a76b1d681fa84efde6f5bdd
ToppCellcontrol-Epithelial-Ionocyte|control / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

RCAN2 SCN9A

3.50e-031652425cfba9a46bd8ceeca74a6493057b4d38af6b06fe
DiseaseB Virus Infection

SCN8A SCN9A

1.90e-063242C0037140
DiseasePostherpetic neuralgia

SCN8A SCN9A

1.90e-063242C0032768
DiseaseHerpesviridae Infections

SCN8A SCN9A

1.90e-063242C0019372
Diseasegeneralized epilepsy with febrile seizures plus 2 (implicated_via_orthology)

SCN8A SCN9A

2.84e-0510242DOID:0111294 (implicated_via_orthology)
DiseaseDravet syndrome (implicated_via_orthology)

SCN8A SCN9A

2.84e-0510242DOID:0080422 (implicated_via_orthology)
Diseasegeneralized epilepsy with febrile seizures plus (implicated_via_orthology)

SCN8A SCN9A

4.16e-0512242DOID:0060170 (implicated_via_orthology)
DiseaseNeurodevelopmental Disorders

CDC42BPB KMT2C SCN8A

5.85e-0593243C1535926
DiseaseBladder Neoplasm

BPTF KMT2C ASAP1

1.97e-04140243C0005695
DiseaseMalignant neoplasm of urinary bladder

BPTF KMT2C ASAP1

2.01e-04141243C0005684
Diseasecircadian rhythm

MEIS1 ASAP1 SCN8A

3.08e-04163243EFO_0004354
DiseaseIntellectual Disability

BPTF KMT2C CUX2 SCN8A

4.34e-04447244C3714756
Diseaseneutrophil percentage of granulocytes

RTF1 BPTF CHD1

8.17e-04228243EFO_0007994
Diseaseeosinophil percentage of granulocytes

RTF1 BPTF CHD1

8.81e-04234243EFO_0007996
Diseasecongenital heart disease (implicated_via_orthology)

KMT2C RNF20

1.44e-0369242DOID:1682 (implicated_via_orthology)
Diseasewaist-hip ratio

MYCBP2 BPTF MEIS1 SMCHD1 CUX2

2.70e-031226245EFO_0004343
Diseasesleep duration

MYCBP2 MEIS1 ASAP1

3.06e-03362243EFO_0005271

Protein segments in the cluster

PeptideGeneStartEntry
DEPAELKPDSEDLSS

RNF20

531

Q5VTR2
LASPEEDPSEDDSIK

CUX2

416

O14529
SLEKDSDDKTPDDDP

BPTF

601

Q12830
SDDKTPDDDPEQGKS

BPTF

606

Q12830
SPLPSEKSDEDDDKL

CHD1

1356

O14646
DSDIEEEEDPKTSPK

RCAN2

166

Q14206
SDESDSSSEEEKKPP

NOLC1

326

Q14978
SDSDSSEDDEAPSKP

NOLC1

366

Q14978
ASPSTGDDDDPDKDK

MEIS1

256

O00470
PSDGLEEKLDSDDPS

KMT2C

2681

Q8NEZ4
EEKLDSDDPSVKELD

KMT2C

2686

Q8NEZ4
KDDADSPTEDGDKPR

MGRN1

101

O60291
PDQDFDKEPDSDSTK

CDC42BPB

1661

Q9Y5S2
DSKAPKPEDIDEEDD

BTF3L4

126

Q96K17
ESDDDLDDKPSPIKK

ASAP1

716

Q9ULH1
DSDVPDDKSDDSDVP

GCNA

211

Q96QF7
DSEAPDDKSDDSDVP

GCNA

301

Q96QF7
DDKSDDSDVPEDKSD

GCNA

306

Q96QF7
DKDTDSTKEPLDDLF

KLC1

166

Q07866
SSDEEEEKEEIPPKS

RTF1

336

Q92541
DDPCFPSKLKDEDDE

SMCHD1

441

A6NHR9
DDDEEAPKPSSDLEA

SCN9A

41

Q15858
SDSDEEEESKEPPIK

MYCBP2

181

O75592
PVASASDPEKDEDDD

REV3L

2096

O60673
EDDSPKSLEEATPSK

TXNDC2

416

Q86VQ3
DGSHREDDEDSKPKP

SCN8A

41

Q9UQD0
EDDEDSKPKPNSDLE

SCN8A

46

Q9UQD0
DSETEKPEADDPKDN

SAP30BP

76

Q9UHR5
EASNDEDDPKDKTLP

SNAPC4

66

Q5SXM2
FKPPEDSQDDESDSD

THOC5

301

Q13769