Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionzinc ion binding

MMP19 DTNA ZFHX3 RTL4 KAT6A

2.44e-03891225GO:0008270
Domain-

HECTD1 BTAF1 RTTN

2.46e-032222331.25.10.10
DomainARM-like

HECTD1 BTAF1 RTTN

4.27e-03270233IPR011989
DomainHelicase_C

DDX19B BTAF1

7.61e-03107232PF00271
DomainHELICc

DDX19B BTAF1

7.61e-03107232SM00490
DomainHelicase_C

DDX19B BTAF1

7.74e-03108232IPR001650
DomainHELICASE_CTER

DDX19B BTAF1

7.88e-03109232PS51194
DomainHELICASE_ATP_BIND_1

DDX19B BTAF1

7.88e-03109232PS51192
DomainDEXDc

DDX19B BTAF1

7.88e-03109232SM00487
DomainARM-type_fold

HECTD1 BTAF1 RTTN

8.02e-03339233IPR016024
DomainHelicase_ATP-bd

DDX19B BTAF1

8.02e-03110232IPR014001
Pubmed

Sustained viral response and treatment-induced cytopenia correlate with SLCs and KLF12 genotypes in interferon/ribavirin-treated Chinese chronic hepatitis C patients.

SLC29A1 SLC4A11

1.37e-06324226750805
Pubmed

Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing.

AIMP1 HECTD1 DTNA ZFHX3 BTAF1 KAT6A HECTD4

4.73e-05148924728611215
Pubmed

Links between alpha-catenin, NF-kappaB, and squamous cell carcinoma in skin.

MMP19 NFKB1

2.68e-043524216452166
Pubmed

EpCAM Is Essential to Maintaining the Immune Homeostasis of Intestines via Keeping the Expression of pIgR in the Intestinal Epithelium of Mice.

MMP19 NFKB1

4.24e-044424235493520
Pubmed

A genome-wide short hairpin RNA screening of jurkat T-cells for human proteins contributing to productive HIV-1 replication.

AIMP1 DTNA NFKB1

4.46e-0421824319460752
Pubmed

IKK-Mediated Regulation of the COP9 Signalosome via Phosphorylation of CSN5.

AIMP1 HECTD1 SLC29A1

4.64e-0422124331950832
Pubmed

PROTAC-mediated degradation reveals a non-catalytic function of AURORA-A kinase.

AIMP1 HECTD1 NFKB1

6.41e-0424724332989298
Cytoband4q24

AIMP1 NFKB1

1.45e-04342424q24
CytobandEnsembl 112 genes in cytogenetic band chr4q24

AIMP1 NFKB1

4.40e-0459242chr4q24
CytobandEnsembl 112 genes in cytogenetic band chr16q22

DDX19B ZFHX3

4.12e-03183242chr16q22
GeneFamilyAnkyrin repeat domain containing

HECTD1 NFKB1

1.67e-02242152403
ToppCelldroplet-Bladder-BLADDER-1m-Epithelial-nan|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LRRC4 DTNA RTL4

5.69e-05140243e442c46979d725ec82f525a001c46d971fcade4d
ToppCell3'_v3-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

BTAF1 NFKB1 KAT6A

1.03e-041712432e9a20f8980b78325c52065a9c14ab3656267c05
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-ASMC|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

MAGEC3 DTNA ZFHX3

1.07e-04173243cb6389536195443633adb06e5f1b7483530773d1
ToppCellmetastatic_Lymph_Node-Myeloid_cells-CD207+CD1a+_LCs|metastatic_Lymph_Node / Location, Cell class and cell subclass

SLC29A1 GASK1A GPT

1.20e-04180243289f8c4b53ffd164fee1f459a9315c0deb5f76d0
ToppCellControl-Fibroblasts-Airway_smooth_muscle|Control / group, cell type (main and fine annotations)

MAGEC3 DTNA ZFHX3

1.20e-04180243d0de12749ef0f51f0931c6e7b9b99966bdbc3ec1
ToppCellrenal_medulla_nuclei-Adult_normal_reference-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_ascending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

DTNA SLC4A11 B3GNT3

1.26e-0418324383592c332b1e82673f993d37c7f480befdc3dcda
ToppCellfacs-Liver-Hepatocytes-24m|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

MMP19 GASK1A GPT

1.26e-04183243d0721c6aa426953a520d40e976b6e65aa7ca65e8
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-mature_alpha-beta_T_cell-T_CD4_c06-NR4A2|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

HECTD1 NFKB1 KAT6A

1.36e-04188243939790f133eac9c12d08db6ddb5f08f5107844e3
ToppCellmetastatic_Lymph_Node-Myeloid_cells-CD207+CD1a+_LCs|Myeloid_cells / Location, Cell class and cell subclass

SLC29A1 GASK1A GPT

1.45e-04192243f18da8db573e584c8b90df0814afcf020360108e
ToppCellClub_cells|World / lung cells shred on cell class, cell subclass, sample id

LRRC4 SLC4A11 B3GNT3

1.47e-041932439d3165dc5763a07a7d873f497624d9d6528fa2db
ToppCellcellseq-Epithelial-Epithelial_Glandular|cellseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

SLC4A11 GPT B3GNT3

1.49e-04194243d0fb1ff5cf0738881e114a58f0b27489f781d72b
ToppCellproximal-Hematologic-IGSF21+_Dendritic|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DTNA BTAF1 CCNJ

1.52e-04195243c48ff83c48342875f06c6c9e7d5bc6084a992848
ToppCellproximal-Hematologic-IGSF21+_Dendritic-3|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DTNA BTAF1 CCNJ

1.52e-04195243ae9d61011e95f7840cbb154738c79745fd29943e
ToppCellproximal-3-Hematologic-IGSF21+_Dendritic|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

DTNA BTAF1 CCNJ

1.52e-041952438592d0332bc82a91e173680cfd1afc5ee189b289
ToppCellMonocytes-M2-like_CD16+_macrophages|World / Immune cells in Kidney/Urine in Lupus Nephritis

LRRC4 DTNA ZFHX3

1.52e-0419524310fa47bdcf6c9784ea930b75a5861e139421feed
ToppCellParenchymal-NucSeq-Epithelial-Epi_airway_basal-Dividing_Basal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

RTTN GPT B3GNT3

1.59e-04198243d5e125f0c4f41b47d567568d0838adcca7655f6d
ToppCellCaecum-(6)_Macrophage|Caecum / shred on region, Cell_type, and subtype

MMP19 DTNA ZFHX3

1.63e-042002432ce3930645c3daf6be578f7881e57a58df61e75c
ToppCellCaecum-Macrophage|Caecum / Region, Cell class and subclass

MMP19 DTNA ZFHX3

1.63e-04200243d83209559187a4419df2508ecc5eb9f7d72fced3
Diseasecarbohydrate intake measurement

ZFHX3 HECTD4

3.50e-0434242EFO_0010811
DiseaseAntithrombotic agent use measurement

ZFHX3 HECTD4

9.17e-0455242EFO_0009925
DiseaseLiver Dysfunction

NFKB1 GPT

1.57e-0372242C0086565
DiseaseLiver diseases

NFKB1 GPT

1.57e-0372242C0023895
DiseaseS-6-hydroxywarfarin measurement

DTNA ZFHX3 BTAF1

3.21e-03368243EFO_0803326
Diseaseprostate cancer (is_implicated_in)

ZFHX3 NFKB1

4.06e-03117242DOID:10283 (is_implicated_in)
Diseasetea consumption measurement

ZFHX3 HECTD4

4.91e-03129242EFO_0010091
Diseaselung non-small cell carcinoma (is_implicated_in)

ZFHX3 NFKB1

5.68e-03139242DOID:3908 (is_implicated_in)
Diseaselung non-small cell carcinoma (is_marker_for)

ZFHX3 NFKB1

8.29e-03169242DOID:3908 (is_marker_for)

Protein segments in the cluster

PeptideGeneStartEntry
VQQQMLKLMSVRLCP

GPT

336

P24298
QMQNRMVILLCNLKP

AIMP1

201

Q12904
LEQLNSLGCMTNMNL

CCNJ

106

Q5T5M9
QGMPKNCLLILILSM

MAGEC3

541

Q8TD91
ELINMNLAQLCSLLM

FAM135A

301

Q9P2D6
MNCQQLWLGFLLPMT

MMP19

1

Q99542
QLSLMDLMLVCNIVP

OR2V1

66

Q8NHB1
LNLGMCNIKDMPNLT

LRRC4

201

Q9HBW1
LQLNPCLAMLMALQS

HECTD4

2781

Q9Y4D8
MNLTSPLLQCNMSAT

KAT6A

1821

Q92794
ASGCLQNMLLKSLQM

GASK1A

516

Q9UFP1
IALEQLCMLLLMSDN

HECTD1

26

Q9ULT8
LCLMMQPSHLPIDLN

BTAF1

611

O14981
QRMLPRNCQMLLFSA

DDX19B

261

Q9UMR2
MLLMWDALNQPNLTC

B3GNT3

351

Q9Y2A9
LYVNMLRNNPSCMLE

DTNA

411

Q9Y4J8
MMDNLPDLITQCIQL

RTL4

201

Q6ZR62
MLCILKLASQMPLEN

RTTN

2011

Q86VV8
EPNCNLDLLMAMLFT

SLC4A11

151

Q8NBS3
PNMCHLQLMETFLIL

TEDDM1

151

Q5T9Z0
NNVMTLCAMLPLLLF

SLC29A1

81

Q99808
LSKMPACNIMLLGAQ

PRPF31

241

Q8WWY3
MLRCPLCQDMLNNKI

ZFHX3

1251

Q15911
HLAMMSNSLPCLLLL

NFKB1

656

P19838