Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctionGTPase activator activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D DNM1L DEPDC1 SRGAP2 TBC1D3C TBC1D3B ASAP2 NF1 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

8.93e-1227911816GO:0005096
GeneOntologyMolecularFunctionnucleoside-triphosphatase regulator activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D DNM1L DEPDC1 SRGAP2 TBC1D3C CHRM4 TBC1D3B RIC8B ASAP2 NF1 KIAA1755 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

1.41e-1050711819GO:0060589
GeneOntologyMolecularFunctionGTPase regulator activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D DNM1L DEPDC1 SRGAP2 TBC1D3C CHRM4 TBC1D3B RIC8B ASAP2 NF1 KIAA1755 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

1.41e-1050711819GO:0030695
GeneOntologyMolecularFunctionenzyme activator activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D DNM1L DEPDC1 SRGAP2 TBC1D3C TBC1D3B STK3 ASAP2 NF1 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

3.13e-0765611817GO:0008047
GeneOntologyMolecularFunctionchromatin binding

RAG2 SOX15 SET SMARCA5 TOX POLR2A ASH1L NUP98 ADNP H1-8 TNRC18 POLR3D PSIP1 SETSIP ATXN7 SMARCA4 MLLT3 NIPBL

3.38e-0773911818GO:0003682
GeneOntologyMolecularFunctionenzyme regulator activity

TBC1D3E SET TBC1D3 TBC1D3H TBC1D3D DNM1L DEPDC1 SRGAP2 TBC1D3C CHRM4 TBC1D3B STK3 RIC8B ASAP2 NF1 PIK3R6 KIAA1755 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

2.60e-05141811822GO:0030234
GeneOntologyMolecularFunctionmolecular function activator activity

TBC1D3E IL16 TBC1D3 TBC1D3H INCENP TBC1D3D DNM1L DEPDC1 SRGAP2 TBC1D3C TBC1D3B STK3 ASAP2 NF1 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

1.09e-04123311819GO:0140677
GeneOntologyMolecularFunctionhistone binding

RAG2 SET SMARCA5 MORC4 SETSIP SMARCA4 MLLT3

1.01e-032651187GO:0042393
GeneOntologyBiologicalProcesspositive regulation of GTPase activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D RAB11FIP2 SRGAP2 TBC1D3C TBC1D3B ASAP2 NF1 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

8.74e-1224411715GO:0043547
GeneOntologyBiologicalProcessactivation of GTPase activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

2.92e-1110911711GO:0090630
GeneOntologyBiologicalProcessregulation of GTPase activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D RAB11FIP2 SRGAP2 TBC1D3C TBC1D3B ASAP2 NF1 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

7.48e-1033511715GO:0043087
GeneOntologyBiologicalProcesspositive regulation of hydrolase activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D RAB11FIP2 SRGAP2 IFI16 TBC1D3C TBC1D3B ASAP2 NF1 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

2.31e-0849911716GO:0051345
GeneOntologyBiologicalProcesschromatin organization

USP36 RAG2 SOX15 SET SMARCA5 TOX ASH1L IFI16 H1-8 PSIP1 BRCA2 SETSIP CTR9 SMARCA4 MLLT3 PRKDC NIPBL

1.21e-0589611717GO:0006325
GeneOntologyBiologicalProcesspositive regulation of catalytic activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D RAB11FIP2 SRGAP2 IFI16 TBC1D3C TBC1D3B ASAP2 NF1 PIK3R6 CD74 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

1.93e-05102811718GO:0043085
GeneOntologyBiologicalProcessregulation of hydrolase activity

TBC1D3E TBC1D3 TBC1D3H TBC1D3D RAB11FIP2 SRGAP2 IFI16 TBC1D3C TBC1D3B ASAP2 NF1 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

3.64e-0587811716GO:0051336
GeneOntologyBiologicalProcessprotein-DNA complex organization

USP36 RAG2 SOX15 SET SMARCA5 TOX ASH1L IFI16 H1-8 PSIP1 BRCA2 SETSIP CTR9 SMARCA4 MLLT3 PRKDC NIPBL

4.81e-0599911717GO:0071824
GeneOntologyBiologicalProcesspositive regulation of molecular function

TBC1D3E TBC1D3 TBC1D3H TBC1D3D RAB11FIP2 SRGAP2 DHX33 IFI16 TBC1D3C TBC1D3B STK3 ASAP2 NF1 PIK3R6 SMARCA4 CD74 ARHGAP25 TBC1D3I TBC1D3G TBC1D3K TBC1D3F

4.98e-05143011721GO:0044093
HumanPhenoFeeding difficulties

SOX11 SET TCF20 ACADS WFS1 PPFIBP1 POLR2A ASH1L DNM1L NUP214 ADNP ADARB1 NALCN ATXN7 PGAP1 KCNJ11 SMARCA4 NIPBL TOP3A

9.48e-0611683219HP:0011968
DomainTBC

TBC1D3E TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3I TBC1D3G TBC1D3K TBC1D3F

1.22e-11491129SM00164
DomainRabGAP-TBC

TBC1D3E TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3I TBC1D3G TBC1D3K TBC1D3F

2.57e-11531129PF00566
DomainTBC_RABGAP

TBC1D3E TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3I TBC1D3G TBC1D3K TBC1D3F

3.65e-11551129PS50086
DomainRab-GTPase-TBC_dom

TBC1D3E TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3I TBC1D3G TBC1D3K TBC1D3F

3.65e-11551129IPR000195
DomainKRAB_RELATED

SSX7 SSX8P

1.89e-03111122PS50806
DomainBAH

ASH1L TNRC18

1.89e-03111122SM00439
DomainBAH

ASH1L TNRC18

1.89e-03111122PF01426
DomainBAH

ASH1L TNRC18

1.89e-03111122PS51038
DomainBAH_dom

ASH1L TNRC18

1.89e-03111122IPR001025
DomainRho_GTPase_activation_prot

DEPDC1 SRGAP2 NF1 ARHGAP25

1.94e-03881124IPR008936
DomainKrueppel-associated_box-rel

SSX7 SSX8P

2.66e-03131122IPR003655
DomainWH2

INF2 COBL

3.09e-03141122SM00246
DomainHMG_box

SOX11 SOX15 TOX

3.95e-03531123PF00505
DomainWH2

INF2 COBL

4.05e-03161122PF02205
DomainHMG_BOX_2

SOX11 SOX15 TOX

4.17e-03541123PS50118
DomainHMG

SOX11 SOX15 TOX

4.17e-03541123SM00398
Domain-

SOX11 SOX15 TOX

4.39e-035511231.10.30.10
DomainNAP

SET SETSIP

4.57e-03171122PF00956
DomainNAP_family

SET SETSIP

4.57e-03171122IPR002164
PathwayWP_17Q12_COPY_NUMBER_VARIATION_SYNDROME

TBC1D3E TBC1D3 TBC1D3H TBC1D3C TBC1D3B TBC1D3I TBC1D3G TBC1D3K

8.49e-0899808M46448
Pubmed

TBC1D3, a hominoid oncoprotein, is encoded by a cluster of paralogues located on chromosome 17q12.

TBC1D3E TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3I TBC1D3G TBC1D3K TBC1D3F

1.64e-24111191016863688
Pubmed

H4K20me0 recognition by BRCA1-BARD1 directs homologous recombination to sister chromatids.

USP36 SMARCA5 TCF20 POLR2A NUP98 NUP214 DHX33 SRBD1 ADNP IFI16 SLC25A3 UTP18 YAF2 WIZ PSIP1 CTR9 SMARCA4 PRKDC NIPBL ILVBL TOP3A

2.94e-0912941192130804502
Pubmed

DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage.

TBC1D3E TBC1D3 TBC1D3H TBC1D3D TBC1D3B TBC1D3G TBC1D3F

6.84e-0974119716625196
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

SMARCA5 TCF20 POLR2A NUP98 NUP214 IFI16 ADARB1 UTP18 NF1 PSIP1 ATXN7 CTR9 SMARCA4 PRKDC NIPBL ANKS1A

9.94e-097741191615302935
Pubmed

N-Terminal Acetyltransferase Naa40p Whereabouts Put into N-Terminal Proteoform Perspective.

USP36 SMARCA5 POLR2A NUP98 DNM1L TACC2 SRGAP2 NUP214 ADNP SLC25A3 WIZ PSIP1 SMARCA4 PRKDC NIPBL AHNAK2 ANKS1A

2.14e-089341191733916271
Pubmed

Interactions of the Antiviral Factor Interferon Gamma-Inducible Protein 16 (IFI16) Mediate Immune Signaling and Herpes Simplex Virus-1 Immunosuppression.

USP36 SMARCA5 INCENP POLR2A NUP98 NUP214 DHX33 IFI16 STK3 UTP18 INF2

2.14e-083321191125693804
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

USP36 SMARCA5 TCF20 INCENP POLR2A NUP214 DHX33 SEC31A SRBD1 ADNP IFI16 SLC25A3 UTP18 NF1 INF2 CTR9 SMARCA4 PRKDC NIPBL AHNAK2

3.44e-0813531192029467282
Pubmed

Comprehensive Interactome Mapping of the DNA Repair Scaffold SLX4 Using Proximity Labeling and Affinity Purification.

USP36 TCF20 ADNP WIZ BRCA2 ATXN7 CTR9 SMARCA4 NIPBL

7.88e-08222119937071664
Pubmed

PRC17, a novel oncogene encoding a Rab GTPase-activating protein, is amplified in prostate cancer.

TBC1D3 TBC1D3D TBC1D3F

1.56e-074119312359748
Pubmed

Identification of novel sequences in the repertoire of hypervariable TRE17 genes from immortalized nonmalignant and malignant human keratinocytes.

TBC1D3 TBC1D3D TBC1D3F

1.56e-07411938406013
Pubmed

BAF complex is closely related to and interacts with NF1/CTF and RNA polymerase II in gene transcriptional activation.

POLR2A NF1 SMARCA4

1.56e-074119315999204
Pubmed

The Nse5/6-like SIMC1-SLF2 complex localizes SMC5/6 to viral replication centers.

USP36 SMARCA5 TCF20 INCENP POLR2A NUP98 NUP214 ADNP SLC25A3 PRAM1 WIZ PSIP1 BRCA2 SMARCA4 PRKDC NIPBL

1.74e-079541191636373674
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

POLR2A KSR2 SRGAP2 NUP214 PRAG1 CHRM4 TNRC18 WIZ INF2 PLEKHO2 CCDC34 KCNJ11 COBL CACNA1H PRKDC TOP3A AHNAK2

2.35e-0711051191735748872
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

USP36 SET SMARCA5 INCENP POLR2A NUP98 DNM1L NUP214 SEC31A ADNP SLC25A3 RIC8B UTP18 NF1 PSIP1 CTR9 SMARCA4 PRKDC NIPBL

3.84e-0714251191930948266
Pubmed

The Tre2 (USP6) oncogene is a hominoid-specific gene.

TBC1D3 TBC1D3D TBC1D3C

3.89e-075119312604796
Pubmed

Human TRE17 oncogene is generated from a family of homologous polymorphic sequences by single-base changes.

TBC1D3 TBC1D3D TBC1D3F

3.89e-07511938471161
Pubmed

In-Depth In Vivo Crosslinking in Minutes by a Compact, Membrane-Permeable, and Alkynyl-Enrichable Crosslinker.

SET SMARCA5 TRO ASH1L DACT2 NUP98 KRBA2 SRBD1 SH3D21 CCDC148 TNRC18 UTP18 PSIP1 SETSIP ATXN7 CTR9 FAM186A PRKDC NIPBL

4.59e-0714421191935575683
Pubmed

Mapping the Ku Interactome Using Proximity-Dependent Biotin Identification in Human Cells.

SET SMARCA5 TCF20 ADNP IFI16 WIZ PSIP1 SMARCA4 PRKDC

6.10e-07283119930585729
Pubmed

Phosphoproteome analysis of the human mitotic spindle.

USP36 SMARCA5 INCENP NUP98 CEP350 NF1 PRKDC NIPBL

6.83e-07210119816565220
Pubmed

A putative 12 transmembrane domain cotransporter expressed in thymic cortical epithelial cells.

RAG2 CD74 PRKDC

7.75e-076119310706709
Pubmed

Transcriptional burst fraction and size dynamics during lens fiber cell differentiation and detailed insights into the denucleation process.

SMARCA5 POLR2A SMARCA4

1.35e-067119329959226
Pubmed

An Oct4-centered protein interaction network in embryonic stem cells.

SET SMARCA5 POLR2A ADNP WIZ SMARCA4 PRKDC

1.85e-06167119720362541
Pubmed

HSF1 phosphorylation establishes an active chromatin state via the TRRAP-TIP60 complex and promotes tumorigenesis.

SOX11 POLR2A DACT2 NUP214 SEC31A H1-8 WIZ BRCA2 SETSIP SMARCA4 COBL ILVBL ANKS1A

2.00e-067541191335906200
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

SET SMARCA5 TCF20 INCENP POLR2A NUP98 DNM1L ADNP IFI16 POLR3D PSIP1 CTR9 SMARCA4 PRKDC NIPBL

2.07e-0610141191532416067
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

SMARCA5 TCF20 INCENP POLR2A NUP98 NUP214 ADNP UTP18 NF1 SMARCA4 PRKDC NIPBL

2.65e-066531191222586326
Pubmed

Interaction network of human early embryonic transcription factors.

SMARCA5 TCF20 NUP98 NUP214 MORC4 TNRC18 WIZ SMARCA4 NIPBL

3.58e-06351119938297188
Pubmed

Association between insulin secretion, insulin sensitivity and type 2 diabetes susceptibility variants identified in genome-wide association studies.

TCF20 WFS1 KCNJ11

4.61e-0610119319082521
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

TCF20 PPFIBP1 RAB11FIP2 DNM1L SRGAP2 PRAG1 CEP350 STK3 NF1 MTUS1 COBL AHNAK2 ANKS1A

8.38e-068611191336931259
Pubmed

Proteomics of herpes simplex virus replication compartments: association of cellular DNA replication, repair, recombination, and chromatin remodeling proteins with ICP8.

SMARCA5 SMARCA4 PRKDC

8.40e-0612119315140983
Pubmed

Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth.

TCF20 ADNP WIZ SMARCA4 NIPBL

1.01e-0583119528794006
Pubmed

Human POGZ modulates dissociation of HP1alpha from mitotic chromosome arms through Aurora B activation.

INCENP ADNP WIZ SMARCA4 NIPBL

1.01e-0583119520562864
Pubmed

Common type 2 diabetes risk gene variants associate with gestational diabetes.

TCF20 WFS1 KCNJ11

1.09e-0513119318984664
Pubmed

Cryptic chromosome 9q34 deletion generates TAF-Ialpha/CAN and TAF-Ibeta/CAN fusion transcripts in acute myeloid leukemia.

SET NUP214

1.16e-052119217296573
Pubmed

Impairment of erythroid and megakaryocytic differentiation by a leukemia-associated and t(9;9)-derived fusion gene product, SET/TAF-Ibeta-CAN/Nup214.

SET NUP214

1.16e-052119217620317
Pubmed

Phenotypic and genetic characterization of adult T-cell acute lymphoblastic leukemia with del(9)(q34);SET-NUP214 rearrangement.

SET NUP214

1.16e-052119221720744
Pubmed

Different developmental arrest points in RAG-2 -/- and SCID thymocytes on two genetic backgrounds: developmental choices and cell death mechanisms before TCR gene rearrangement.

RAG2 PRKDC

1.16e-05211929126963
Pubmed

Partial cloning of SOX-11 and SOX-12, two new human SOX genes.

SOX11 SOX15

1.16e-05211928332506
Pubmed

The characteristics and prognostic significance of the SET-CAN/NUP214 fusion gene in hematological malignancies: A systematic review.

SET NUP214

1.16e-052119235905214
Pubmed

Loss of the deubiquitinase USP36 destabilizes the RNA helicase DHX33 and causes preimplantation lethality in mice.

USP36 DHX33

1.16e-052119229273634
Pubmed

SET-NUP214 fusion in acute myeloid leukemia- and T-cell acute lymphoblastic leukemia-derived cell lines.

SET NUP214

1.16e-052119219166587
Pubmed

The C-terminal domain of RNA Pol II helps ensure that editing precedes splicing of the GluR-B transcript.

POLR2A ADARB1

1.16e-052119217525170
Pubmed

Cardiovascular adaptations of pregnancy in T and B cell-deficient mice.

RAG2 PRKDC

1.16e-052119221613629
Pubmed

t(9;11)(p22;p15) with NUP98-LEDGF fusion gene in pediatric acute myeloid leukemia.

NUP98 PSIP1

1.16e-052119215725483
Pubmed

Dendritic cells require T cells for functional maturation in vivo.

RAG2 PRKDC

1.16e-052119210591187
Pubmed

BRCA2 Regulates Transcription Elongation by RNA Polymerase II to Prevent R-Loop Accumulation.

POLR2A BRCA2

1.16e-052119229386125
Pubmed

Memory CD4+ T cells are required for optimal NK cell effector functions against the opportunistic fungal pathogen Pneumocystis murina.

RAG2 PRKDC

1.16e-052119223203926
Pubmed

T cell receptor gamma and delta gene rearrangements in scid thymocytes. Similarity to those in normal thymocytes.

RAG2 PRKDC

1.16e-05211921661315
Pubmed

Effects of SET and SET-CAN on the differentiation of the human promonocytic cell line U937.

SET NUP214

1.16e-052119214671643
Pubmed

Expression of the novel NUP98/PSIP1 fusion transcripts in myelodysplastic syndrome with t(9;11)(p22;p15).

NUP98 PSIP1

1.16e-052119222103895
Pubmed

SET-NUP214 is a recurrent γδ lineage-specific fusion transcript associated with corticosteroid/chemotherapy resistance in adult T-ALL.

SET NUP214

1.16e-052119224449214
Pubmed

Mammalian ISWI and SWI/SNF selectively mediate binding of distinct transcription factors.

SMARCA5 SMARCA4

1.16e-052119230996347
Pubmed

ZMYM3 regulates BRCA1 localization at damaged chromatin to promote DNA repair.

SET SMARCA5 ADNP WIZ SMARCA4 NIPBL

1.35e-05150119628242625
Pubmed

TTF-1/NKX2-1 binds to DDB1 and confers replication stress resistance to lung adenocarcinomas.

SMARCA5 TCF20 NUP98 IFI16 SLC25A3 PRKDC

1.46e-05152119628192407
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

POLR2A DNM1L NUP214 CTR9 SMARCA4 PRKDC NIPBL AHNAK2

1.98e-05332119832786267
Pubmed

Shotgun sequencing of the human transcriptome with ORF expressed sequence tags.

TBC1D3H INCENP POLR2A DACT2 SEC31A CHRM4 SH3D21 RIC8B AUNIP MTUS1

2.12e-055521191010737800
Pubmed

Reciprocal interaction between SIRT6 and APC/C regulates genomic stability.

SMARCA5 POLR2A NUP98 NUP214 ADNP NF1 CTR9 SMARCA4 SMG9

2.17e-05440119934244565
Pubmed

Telencephalic embryonic subtractive sequences: a unique collection of neurodevelopmental genes.

SOX11 SMARCA5 DNM1L ADNP PSIP1 PGAP1

2.32e-05165119616107646
Pubmed

NuRD subunit CHD4 regulates super-enhancer accessibility in rhabdomyosarcoma and represents a general tumor dependency.

SMARCA5 TCF20 ADNP WIZ SMARCA4

2.89e-05103119532744500
Pubmed

An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse.

SMARCA5 WIZ SMARCA4

3.07e-0518119324025402
Pubmed

Identification of FMRP target mRNAs in the developmental brain: FMRP might coordinate Ras/MAPK, Wnt/β-catenin, and mTOR signaling during corticogenesis.

NF1 SMARCA4 NIPBL

3.07e-0518119333323119
Pubmed

Compartmentalization of the SUMO/RNF4 pathway by SLX4 drives DNA repair.

INCENP NUP214 ADNP CEP350 WIZ BRCA2 CTR9 PRKDC

3.32e-05357119837059091
Pubmed

Alveolar macrophages in neonatal mice are inherently unresponsive to Pneumocystis murina infection.

RAG2 PRKDC

3.47e-053119222665378
Pubmed

Diversity of human copy number variation and multicopy genes.

TBC1D3E TBC1D3G

3.47e-053119221030649
Pubmed

ASH1L Links Histone H3 Lysine 36 Dimethylation to MLL Leukemia.

ASH1L PSIP1

3.47e-053119227154821
Pubmed

Microenvironment determines lineage fate in a human model of MLL-AF9 leukemia.

MLLT3 PRKDC

3.47e-053119218538732
Pubmed

Feasibility of Telomerase-Specific Adoptive T-cell Therapy for B-cell Chronic Lymphocytic Leukemia and Solid Malignancies.

RAG2 PRKDC

3.47e-053119227197263
Pubmed

Reversal of malignant ADAR1 splice isoform switching with Rebecsinib.

RAG2 PRKDC

3.47e-053119236803553
Pubmed

Nucleoporins nup98 and nup214 participate in nuclear export of human immunodeficiency virus type 1 Rev.

NUP98 NUP214

3.47e-05311929847314
Pubmed

An actin-dependent step in mitochondrial fission mediated by the ER-associated formin INF2.

DNM1L INF2

3.47e-053119223349293
Pubmed

The recurrent SET-NUP214 fusion as a new HOXA activation mechanism in pediatric T-cell acute lymphoblastic leukemia.

SET NUP214

3.47e-053119218299449
Pubmed

Neurofibromatosis with male breast cancer--risk factor or co-incidence? Report of two rare cases.

NF1 BRCA2

3.47e-053119225267367
Pubmed

A role for nucleoporin FG repeat domains in export of human immunodeficiency virus type 1 Rev protein and RNA from the nucleus.

NUP98 NUP214

3.47e-05311928943370
Pubmed

The SCID but not the RAG-2 gene product is required for S mu-S epsilon heavy chain class switching.

RAG2 PRKDC

3.47e-05311928885865
Pubmed

Resistance to skin tumorigenesis in DNAPK-deficient SCID mice is not due to immunodeficiency but results from hypersensitivity to TPA-induced apoptosis.

RAG2 PRKDC

3.47e-053119210545405
Pubmed

The RAG-1/2 endonuclease causes genomic instability and controls CNS complications of lymphoblastic leukemia in p53/Prkdc-deficient mice.

RAG2 PRKDC

3.47e-053119212559174
Pubmed

Differences between immunodeficient mice generated by classical gene targeting and CRISPR/Cas9-mediated gene knockout.

RAG2 PRKDC

3.47e-053119229594927
Pubmed

Xenogeneic graft-versus-host-disease in NOD-scid IL-2Rγnull mice display a T-effector memory phenotype.

RAG2 PRKDC

3.47e-053119222937164
Pubmed

Dual Specificity Kinase DYRK3 Promotes Aggressiveness of Glioblastoma by Altering Mitochondrial Morphology and Function.

DNM1L DYRK3

3.47e-053119233804169
Pubmed

Competition for specific intrathymic ligands limits positive selection in a TCR transgenic model of CD4+ T cell development.

RAG2 CD74

3.47e-053119210843678
Pubmed

Activated glucocorticoid receptor interacts with the INHAT component Set/TAF-Ibeta and releases it from a glucocorticoid-responsive gene promoter, relieving repression: implications for the pathogenesis of glucocorticoid resistance in acute undifferentiated leukemia with Set-Can translocation.

SET NUP214

3.47e-053119218096310
Pubmed

Nup98 localizes to both nuclear and cytoplasmic sides of the nuclear pore and binds to two distinct nucleoporin subcomplexes.

NUP98 NUP214

3.47e-053119212589057
Pubmed

V(D)J recombination activates a p53-dependent DNA damage checkpoint in scid lymphocyte precursors.

RAG2 PRKDC

3.47e-05311928769647
Pubmed

B cell acute lymphoblastic leukemia cells mediate RANK-RANKL-dependent bone destruction.

RAG2 PRKDC

3.47e-053119232938796
Pubmed

The nuclear pore complex: a new dynamic in HIV-1 replication.

NUP98 NUP214

3.47e-053119221327100
Pubmed

MYC multimers shield stalled replication forks from RNA polymerase.

USP36 SMARCA5 TCF20 INCENP POLR2A DHX33 SRBD1 ADNP SLC25A3 UTP18 CTR9 SMARCA4 PRKDC

3.56e-059891191336424410
Pubmed

Proximity-dependent Mapping of the Androgen Receptor Identifies Kruppel-like Factor 4 as a Functional Partner.

TCF20 MORC4 TNRC18 WIZ CTR9 SMARCA4 NIPBL

4.01e-05268119733640491
Pubmed

Systematic analysis of human protein complexes identifies chromosome segregation proteins.

SET INCENP POLR2A NUP98 TACC2 NUP214 MAD2L1BP CEP350 STK3 INF2 SMARCA4 PRKDC NIPBL TOP3A

4.24e-0511551191420360068
Pubmed

A human MAP kinase interactome.

TCF20 NUP98 NUP214 SEC31A CEP350 ASAP2 COBL PRKDC TBC1D3F

4.69e-05486119920936779
Pubmed

Assessing the combined impact of 18 common genetic variants of modest effect sizes on type 2 diabetes risk.

TCF20 WFS1 KCNJ11

4.97e-0521119318591388
Pubmed

Underlying genetic models of inheritance in established type 2 diabetes associations.

TCF20 WFS1 KCNJ11

4.97e-0521119319602701
Pubmed

Identifying biological pathways that underlie primordial short stature using network analysis.

SMARCA5 TCF20 POLR2A NUP98 NUP214 ADNP CEP350 SLC25A3 NF1 PSIP1 SMARCA4 PRKDC NIPBL

5.08e-0510241191324711643
Pubmed

Use of multiple metabolic and genetic markers to improve the prediction of type 2 diabetes: the EPIC-Potsdam Study.

TCF20 WFS1 KCNJ11

6.58e-0523119319720844
Pubmed

An improved smaller biotin ligase for BioID proximity labeling.

TCF20 ASH1L NUP98 NUP214 AHNAK2

6.75e-05123119526912792
Pubmed

Aberrant intracellular localization of SET-CAN fusion protein, associated with a leukemia, disorganizes nuclear export.

SET NUP214

6.93e-054119215239126
Pubmed

FANCD2, FANCJ and BRCA2 cooperate to promote replication fork recovery independently of the Fanconi Anemia core complex.

BRCA2 TOP3A

6.93e-054119225659033
Pubmed

Dendritic cell-dependent in vivo generation of autoregulatory T cells by antidiabetogenic MHC class II.

RAG2 PRKDC

6.93e-054119223740949
Pubmed

Dendritic cells directly trigger NK cell functions: cross-talk relevant in innate anti-tumor immune responses in vivo.

RAG2 PRKDC

6.93e-054119210202929
Pubmed

Anti-CD20 antibody therapy and susceptibility to Pneumocystis pneumonia.

RAG2 PRKDC

6.93e-054119225733518
Pubmed

The intramembrane protease SPPL2a promotes B cell development and controls endosomal traffic by cleavage of the invariant chain.

RAG2 CD74

6.93e-054119223267015
Pubmed

The importin-beta family member Crm1p bridges the interaction between Rev and the nuclear pore complex during nuclear export.

NUP98 NUP214

6.93e-05411929368759
InteractionCSNK2A1 interactions

SET IL16 POLR2A NUP98 IRF2 SRGAP2 SRBD1 ADNP IFI16 UTP18 YAF2 PSIP1 INF2 SETSIP CTR9 UBAC1 SMARCA4 ANKRD36 PRKDC

1.66e-0695611419int:CSNK2A1
InteractionSLX4 interactions

USP36 TCF20 INCENP POLR2A NUP214 ADNP CEP350 WIZ BRCA2 ATXN7 CTR9 SMARCA4 PRKDC NIPBL

4.34e-0657211414int:SLX4
InteractionXRCC6 interactions

USP36 SET SMARCA5 TCF20 DNM1L IRF2 ADNP IFI16 ADARB1 SLC25A3 TNRC18 YAF2 WIZ PSIP1 BRCA2 SMARCA4 PRKDC ILVBL

4.53e-0692811418int:XRCC6
InteractionH2AX interactions

SET SMARCA5 POLR2A ADNP IFI16 ADARB1 TNRC18 YAF2 WIZ PSIP1 BRCA2 SMARCA4 PRKDC NIPBL

6.55e-0659311414int:H2AX
InteractionH2AZ1 interactions

USP36 SET SMARCA5 TCF20 INCENP SRBD1 ADNP WIZ PSIP1 SMARCA4 PRKDC

8.40e-0637111411int:H2AZ1
InteractionH2BC9 interactions

SMARCA5 TRO POLR2A ASH1L NUP98 CRAT ADARB1 CEP350 H1-8 TNRC18 PSIP1 ANKRD36

8.56e-0644611412int:H2BC9
InteractionZNF330 interactions

USP36 SET SMARCA5 TCF20 INCENP DHX33 SRBD1 WIZ PSIP1 CTR9 SMARCA4 NIPBL

8.56e-0644611412int:ZNF330
InteractionH2BC21 interactions

SMARCA5 TCF20 INCENP POLR2A SRBD1 ADNP IFI16 ADARB1 WIZ PSIP1 CTR9 SMARCA4 PRKDC NIPBL TOP3A

8.93e-0669611415int:H2BC21
InteractionH3C1 interactions

USP36 SOX11 SET SMARCA5 INCENP POLR2A ASH1L SRBD1 ADNP TNRC18 WIZ PSIP1 CTR9 SMARCA4 MLLT3 PRKDC NIPBL

1.23e-0590111417int:H3C1
InteractionNAA40 interactions

USP36 SMARCA5 POLR2A NUP98 DNM1L TACC2 SRGAP2 NUP214 ADNP SLC25A3 WIZ PSIP1 SMARCA4 PRKDC NIPBL AHNAK2 ANKS1A

3.50e-0597811417int:NAA40
InteractionTOP1 interactions

USP36 SOX15 SMARCA5 TCF20 POLR2A ADNP IFI16 SLC25A3 NF1 BRCA2 CTR9 SMARCA4 PRKDC NIPBL

3.88e-0569611414int:TOP1
InteractionPARP1 interactions

USP36 SMARCA5 INCENP POLR2A DNM1L IRF2 DHX33 SEC31A SRBD1 IFI16 ASAP2 UTP18 WIZ PSIP1 BRCA2 CTR9 SMARCA4 PRKDC NIPBL TOP3A

4.53e-05131611420int:PARP1
InteractionTBXT interactions

TCF20 MORC4 YAF2 WIZ SMARCA4 NIPBL

5.14e-051161146int:TBXT
InteractionNKX2-1 interactions

SMARCA5 TCF20 NUP98 IFI16 SLC25A3 SMARCA4 PRKDC

7.43e-051801147int:NKX2-1
InteractionFOXE1 interactions

SMARCA5 ADNP WIZ PSIP1 SMARCA4

9.65e-05811145int:FOXE1
InteractionPOLR1G interactions

USP36 TCF20 INCENP POLR2A DHX33 POLR3D UTP18 WIZ CTR9 SMARCA4 NIPBL

1.04e-0448911411int:POLR1G
InteractionHMGA1 interactions

SMARCA5 TCF20 POLR2A PANX2 TNRC18 PSIP1 BRCA2 CTR9 SMARCA4 PRKDC

1.35e-0441911410int:HMGA1
InteractionLLPH interactions

USP36 TRO IFI16 ADARB1 H1-8 ZFP41

1.40e-041391146int:LLPH
InteractionSMC5 interactions

USP36 SMARCA5 TCF20 INCENP POLR2A NUP98 NUP214 ADNP SLC25A3 PRAM1 WIZ PSIP1 BRCA2 SMARCA4 PRKDC NIPBL

1.59e-04100011416int:SMC5
InteractionPOLR1E interactions

USP36 POLR2A SEC31A IFI16 POLR3D UTP18 WIZ BRCA2 CTR9

1.70e-043501149int:POLR1E
InteractionCIT interactions

SMARCA5 TCF20 INCENP POLR2A ASH1L NUP98 SEC31A SRBD1 ADNP IFI16 SLC25A3 UTP18 PSIP1 INF2 CTR9 SMARCA4 PRKDC NIPBL AHNAK2 DYRK3

1.71e-04145011420int:CIT
CytobandEnsembl 112 genes in cytogenetic band chr17q12

TBC1D3E TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3I TBC1D3G TBC1D3K TBC1D3F

7.51e-1214911910chr17q12
Cytoband17q12

TBC1D3 TBC1D3H TBC1D3C TBC1D3B TBC1D3F

6.33e-0699119517q12
Cytoband2p25

SOX11 ASAP2

9.92e-041811922p25
Cytoband9q34.1

NUP214 CRAT

1.11e-031911929q34.1
CytobandEnsembl 112 genes in cytogenetic band chr17p13

SOX15 POLR2A KRBA2 DHX33 PIK3R6

2.14e-033461195chr17p13
GeneFamilyAnkyrin repeat domain containing

ANKMY1 ASAP2 ANKRD36 MYO16 ANKS1A

1.15e-03242595403
GeneFamilySRY-boxes

SOX11 SOX15

1.73e-0319592757
GeneFamilyRNA polymerase subunits

POLR2A POLR3D

4.02e-0329592726
GeneFamilyNucleoporins

NUP98 NUP214

4.88e-03325921051
CoexpressionAtlasMesoderm Day 15_vs_Mesoderm Day 30-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3G TBC1D3K TBC1D3F

2.89e-08901148PCBC_ratio_MESO-15_vs_MESO-30_cfr-2X-p05
CoexpressionAtlasDE cord blood_vs_DE blastocyst-Confounder_removed-fold2.0_adjp0.05

CELF6 TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B MTUS1 TBC1D3G TBC1D3K TBC1D3F

7.41e-0724211410PCBC_ratio_DE cord blood_vs_DE blastocyst_cfr-2X-p05
CoexpressionAtlasMesoderm Day 5-reprogram_OSKM-L_vs_Mesoderm Day 5-reprogram_NA-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B CD74 CACNA1H TBC1D3G TBC1D3K TBC1D3F

2.85e-0628111410PCBC_ratio_MESO-5_from-OSKM-L_vs_MESO-5_from-ESC_cfr-2X-p05
CoexpressionAtlasMesoderm Day 5-method_mRNA_vs_Mesoderm Day 5-method_NA-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B CD74 CACNA1H TBC1D3G TBC1D3K TBC1D3F

2.85e-0628111410PCBC_ratio_MESO-5_from-mRNA_vs_MESO-5_from-ESC_cfr-2X-p05
CoexpressionAtlasEndoderm Differentiated Cells-method_mRNA_vs_Endoderm Differentiated Cells-method_NA-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3G TBC1D3K TBC1D3F

1.99e-052131148PCBC_ratio_DE_from-mRNA_vs_DE_from-ESC_cfr-2X-p05
CoexpressionAtlasEndoderm Differentiated Cells-reprogram_OSKM-L_vs_Endoderm Differentiated Cells-reprogram_NA-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3D TBC1D3C TBC1D3B TBC1D3G TBC1D3K TBC1D3F

1.99e-052131148PCBC_ratio_DE_from-OSKM-L_vs_DE_from-ESC_cfr-2X-p05
CoexpressionAtlasEctoderm Differentiated Cells_vs_Pluripotent Stem Cells-Confounder_removed-fold2.0_adjp0.05

SOX11 TBC1D3 TBC1D3H TBC1D3D TRO RAB11FIP2 IFI16 TBC1D3C TBC1D3B SH3D21 STK3 TNRC18 ATXN7 PGAP1 CDC42EP5 CD74 CACNA1H ANKRD36 TBC1D3G TBC1D3K TBC1D3F

3.15e-05146611421PCBC_ratio_ECTO_vs_SC_cfr-2X-p05
CoexpressionAtlasMesoderm Day 5_vs_Pluripotent Stem Cells-Confounder_removed-fold2.0_adjp0.05

CELF6 TBC1D3 TBC1D3H TBC1D3D PPFIBP1 TRO DACT2 SRGAP2 PTGES3L PRAG1 TBC1D3C TBC1D3B TNRC18 INF2 ATXN7 TBC1D3G TBC1D3K TBC1D3F

4.17e-05115311418PCBC_ratio_MESO-5_vs_SC_cfr-2X-p05
CoexpressionAtlasMesoderm Day 5_vs_Endoderm Differentiated Cells-Confounder_removed-fold2.0_adjp0.05

TBC1D3 TBC1D3H TBC1D3D PRAG1 TBC1D3C TBC1D3B TBC1D3G TBC1D3K TBC1D3F

5.81e-053201149PCBC_ratio_MESO-5_vs_DE_cfr-2X-p05
CoexpressionAtlasEctoderm Differentiated Cells_vs_Endoderm Differentiated Cells-Confounder_removed-fold2.0_adjp0.05

SOX11 TBC1D3 TBC1D3H TBC1D3D RAB11FIP2 TACC2 TBC1D3C TBC1D3B RIC8B ASAP2 CDC42EP5 CD74 CACNA1H ANKRD36 TBC1D3G TBC1D3K TBC1D3F

5.95e-05107511417PCBC_ratio_ECTO_vs_DE_cfr-2X-p05
CoexpressionAtlasMesoderm Day 15_vs_Mesoderm Day 5-Confounder_removed-fold2.0_adjp0.05

FMO1 TBC1D3 TBC1D3H ACADS TBC1D3D CRAT TBC1D3C TBC1D3B SH3D21 CEP350 CDC42EP5 COBL CD74 TBC1D3G TBC1D3K TBC1D3F

1.52e-04104911416PCBC_ratio_MESO-15_vs_MESO-5_cfr-2X-p05
CoexpressionAtlaskidney_adult_RenalCapsule_k-means-cluster#2_top-relative-expression-ranked_1000

CRISPLD2 BNC2 IL16 MTUS1 PLEKHO2 PTPRQ COBL CD74 AHNAK2

1.71e-043691149gudmap_kidney_adult_RenalCapsule_k2_1000
CoexpressionAtlasratio_induced-Ectoderm_vs_StemCell_top-relative-expression-ranked_1000

CELF6 TBC1D3 TBC1D3H MORC4 TBC1D3C TBC1D3B SH3D21 CCDC148 PRAM1 TNRC18 YAF2 ZFP41 CDC42EP5 KIAA1755 TBC1D3F

2.56e-0498611415PCBC_ratio_ECTO_vs_SC_1000
CoexpressionAtlasFacebaseRNAseq_e10.5_Neural Epithelium Flanking Eminence_top-relative-expression-ranked_1000_k-means-cluster#2

SOX11 SMARCA5 SLC4A8 TOX BRCA2 MLLT3 PRKDC NIPBL

2.78e-043111148Facebase_RNAseq_e10.5_Neural Epithelium Flanking Eminence_1000_K2
ToppCellcritical-Epithelial-FOXN4+|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DEPDC1 ASAP2 PSIP1 BRCA2 CCDC34 CDC42EP5 ANKRD36

1.06e-0619811976b160b3d6a2c1b1641c2c7dcec1a7ef38411fec9
ToppCellChildren_(3_yrs)-Immune-mast_cell-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

BNC2 TRO ST3GAL4 AUNIP PIK3R6 AHNAK2

3.28e-061511196bbf735c6433c3fc2feedb24ed6f48c51d545fb60
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Deuterosomal|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CHRM4 CEP350 ASAP2 PSIP1 BRCA2 CCDC34

8.72e-061791196d15182c668d7c37be8214cad9f1fe35d1409c9a1
ToppCell5'-Airway_Nasal-Epithelial-Airway_ciliated-multi-ciliated_epithelial_cell-Deuterosomal-Deuterosomal_L.0.3.4.0|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CHRM4 CEP350 ASAP2 PSIP1 BRCA2 CCDC34

8.72e-061791196e22a275a7c0ed19113c833a75d6c49fcc19aa13a
ToppCellCerebellum-Neuronal|Cerebellum / BrainAtlas - Mouse McCarroll V32

TRO KSR2 DNM1L PANX2 ADARB1 NALCN

1.12e-05187119661b9d6eb131a674598aa8409d7fa909c8765442d
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-Mes-Like|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC4A8 KSR2 CRAT BRCA2 PTPRQ

1.17e-051101195c80d1c3df75648e2c8f6832279c2acca63d76681
ToppCellmoderate-Epithelial-FOXN4+|moderate / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DEPDC1 ASAP2 PSIP1 BRCA2 CCDC34 ANKRD36

1.38e-0519411965dffa578149104dda33774361e9e77b227b5f1ce
ToppCellmoderate-Epithelial-FOXN4+|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DEPDC1 CEP350 PSIP1 BRCA2 CCDC34 ANKRD36

1.38e-051941196dff3fb10372053951d41e0ccd41aac3ece6009bd
ToppCellParenchymal-10x5prime-Stromal-Peri/Epineurial_-NAF_endoneurial|10x5prime / Cell types per location group and 10X technology with lineage, and cell group designations

CRISPLD2 SOX15 ST3GAL4 RIC8B MTUS1 CDC42EP5

1.64e-0520011968a4c210a3130f7baedf15ecbc0f4903b97da0352
ToppCellLPS-antiTNF-Epithelial_alveolar-Mes-Like-Differentiating_AT1|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

SLC4A8 ANKMY1 PRAG1 CACNA1H PACRG

2.43e-0512811952cf0384240a4a663869cf6b27d954236f6214a9a
ToppCell3'_v3-Lung-Lymphocytic_T_CD4-T_CD4/CD8|Lung / Manually curated celltypes from each tissue

DACT2 CHRM4 PGAP1 MLLT3 ANKRD36

5.35e-051511195999c11d19b61d6b130ad5e623afa83cbdfe13cdd
ToppCellprimary_visual_cortex-Neuronal-glutamatergic_neuron-L5_IT-L5_IT_VISp_Batf3|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

TOX INCENP INF2 COBL ARHGAP25

6.43e-051571195921805932f7974d37aed547861d555b07f30aba6
ToppCellControl-Endothelial-Epi-like|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

RABEPK ACADS DACT2 KRBA2 MORC4

6.43e-0515711954d02c50d5d1b892ea241e98724386d8a5a156a46
ToppCellControl-Endothelial-Epi-like-Alv_Cap|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

RABEPK ACADS DACT2 KRBA2 MORC4

6.43e-0515711952c369660c752c0fb3bd798a561d3359e2f9aa983
ToppCellcritical-Myeloid-Mast_cell|critical / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

BNC2 TRO PIK3R6 CACNA1H MYO16

8.14e-05165119534a1cc6ccd46c059354e8fbde1ac69f202695a4e
ToppCellChildren_(3_yrs)-Mesenchymal-myofibroblast_cell-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

CRISPLD2 SOX15 BNC2 ADARB1 NALCN

8.37e-05166119594636dbc039f794c735960c3425e00bdd5523602
ToppCellNS-critical-d_07-13-Myeloid-Mast_cell|d_07-13 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

BNC2 TRO ADARB1 CACNA1H MYO16

8.61e-0516711958a14fd980d8ebe8ef0216221f619d31aaa27ff15
ToppCell390C-Lymphocytic-NK_cells-Proliferating_NK_cell|390C / Donor, Lineage, Cell class and subclass (all cells)

SOX11 INCENP DEPDC1 AUNIP CCDC34

9.37e-0517011955319f73cff64f2bb67472c7156ee1d0f006c6fc0
ToppCellnormal_Lung-T/NK_cells-CD8+/CD4+_Mixed_Th|T/NK_cells / Location, Cell class and cell subclass

MORC4 CEP350 MTUS1 INF2 PGAP1

9.90e-0517211950657c736f3c52d25cf7f652eac005ddcde9232ef
ToppCelldroplet-Kidney-nan-24m-Lymphocytic-CD45|Kidney / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

INCENP DEPDC1 PRAM1 AUNIP DYRK3

9.90e-05172119595219814e37259e34be053572cc95d4639360c27
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

FAM215A KRBA2 DEPDC1 SSX7 BRCA2

1.04e-04174119584da9faff088d05233183b425385beb054c92d1b
ToppCellPND28-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC-EPC_G2M|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

INCENP DEPDC1 SRGAP2 NF1 CCDC34

1.04e-04174119572df66319f6efbd88ecf439013d97409fbf3cb52
ToppCellPND28-Endothelial-Endothelial_blood-vessel-Microvascular_EC-EPC|PND28 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

INCENP DEPDC1 SRGAP2 NF1 CCDC34

1.04e-041741195c6087fd0e036ec7f40f0f8f17d1f6ce13ddb5235
ToppCellrenal_cortex_nuclei-Adult_normal_reference-Epithelial-Proximal_tubule_epithelial_cell-kidney_proximal_tubule_epithelial_cell_cycling-Cycling_Proximal_Tubule_Epithelial_Cell_G2M|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

INCENP FAM215A KRBA2 DEPDC1 BRCA2

1.04e-041741195dbb4e1a6c3319ce40f81bfd2d1745a88a2cc412e
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Inh_GABAergic-i_Gaba_3-GABA_PVALB_2|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

SOX11 TOX DACT2 MTUS1 MYO16

1.07e-04175119511f49f00e000cbc137e3540a6d6805cde21d96e6
ToppCellNS-critical-d_16-33-Epithelial-FOXN4+|d_16-33 / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

DEPDC1 H1-8 ASAP2 BRCA2 CCDC34

1.10e-0417611957cf1a06ceee1ec06532f44c729c31b4d58e5ea49
ToppCell390C-Lymphocytic-NK_cells-Proliferating_NK_cell|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

SOX11 INCENP DEPDC1 AUNIP CCDC34

1.10e-0417611958813c01ea080f373fe3970c5e1ba4c2dca0f7f02
ToppCell3'-GW_trimst-2-LargeIntestine-Hematopoietic-Myeloid-cDC1|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

IL16 AUNIP PIK3R6 NALCN CD74

1.10e-04176119587f90834c7278516beff7814b78f7c75732d9bf0
ToppCellkidney_cells-Adult_normal_reference-Endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell_of_renal_cortex|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

WFS1 PPFIBP1 MTUS1 PLEKHO2 CDC42EP5

1.13e-041771195227d4f423b00be2e0c5797e2c5275d342e69a0f4
ToppCellkidney_cells-Adult_normal_reference-Endothelial-lymphatic_endothelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

WFS1 PPFIBP1 MTUS1 PLEKHO2 CDC42EP5

1.13e-04177119566ffa279147961080c104242a08b176e301d80e3
ToppCellmetastatic_Brain-Fibroblasts-Undetermined|metastatic_Brain / Location, Cell class and cell subclass

BNC2 FMO1 PPFIBP1 DACT2 MORC4

1.13e-04177119554f39be5d90363cfd44dea1a96ae06d3143aa795
ToppCelldroplet-Limb_Muscle-nan-18m-Mesenchymal-skeletal_muscle_cell|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

PTGES3L CRAT UBAC1 KCNJ11 MLLT3

1.13e-041771195f6ff1b035fa2418f2448c99d81faa927ece93dfa
ToppCellkidney_cells-Adult_normal_reference-Endothelial-lymphatic_endothelial_cell-lymphatic_endothelial_cell_of_renal_cortex-lymphatic_endothelial_cell_of_renal_cortex|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

WFS1 PPFIBP1 MTUS1 PLEKHO2 CDC42EP5

1.13e-0417711950cbf54608d2ba0a0500af142f2029fe5e118c3c2
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell-Medullary_Thick_Ascending_Limb_Cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TOX ST3GAL4 NRK COBL CACNA1H

1.16e-041781195dfed0fbf7a73b8a9e00178ec58dc4592b271c344
ToppCellwk_15-18-Mesenchymal-Chondrocyte-ASPN+_chondrocyte|wk_15-18 / Celltypes from embryonic and fetal-stage human lung

TBC1D3B SH3D21 NRK ANKRD36 AHNAK2

1.16e-041781195a55130670aa95a87b833dd3cd2de461d779e4c06
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell-kidney_loop_of_Henle_thick_ascending_limb_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TOX ST3GAL4 NRK COBL CACNA1H

1.19e-041791195d0fa700648db8ce76a8aa689879a25048299fa40
ToppCell390C-Lymphocytic-NK_cells-Proliferating_NK_cell|NK_cells / Donor, Lineage, Cell class and subclass (all cells)

SOX11 INCENP DEPDC1 AUNIP CCDC34

1.19e-041791195e67ad7ab04d0c1309296f57c1f53c5ca14c213fe
ToppCellILEUM-non-inflamed-(7)_Lymphatics|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

SOX11 WFS1 PPFIBP1 MTUS1 ANKS1A

1.19e-04179119599777a8931356d1206b8ab22aaa1b1d5a600b809
ToppCellrenal_papilla_nuclei-Adult_normal_reference-Epithelial-Distal_tubule_epithelial_cell|Adult_normal_reference / Celltypes from Cells and Nuclei per compartment and clinical group

TOX ST3GAL4 NRK COBL CACNA1H

1.19e-0417911952e49b215b71438400aebb483f2c2c08d5e956961
ToppCell5'-Parenchyma_lung-Mesenchymal-Mesenchymal_Myocytic-myocytic_fibroblast-Myofibroblasts-Myofibroblasts_L.2.3.2.2|5' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

CRISPLD2 BNC2 NALCN NRK KIAA1755

1.26e-041811195b116c68393d8836bac080f81a8fcbeb52e0403e7
ToppCelldroplet-Lung-18m-Hematologic-lymphocytic-Proliferating_T_cell-proliferating_T|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

INCENP DEPDC1 AUNIP KIAA1755 CTSW

1.36e-0418411951edefa2a049d7e22d0bdb1ea3d7ef1c8d6ae0fe3
ToppCelldroplet-Lung-18m-Hematologic-lymphocytic-Proliferating_T_cell|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

INCENP DEPDC1 AUNIP KIAA1755 CTSW

1.36e-0418411958578c50eaa8ce1cefc0228185c66c8e25f4bfc32
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_1-D122|Adult / Lineage, Cell type, age group and donor

WFS1 PPFIBP1 TACC2 PTPRQ MYO16

1.36e-041841195561592edc3083fad41b91811151b442207c65dd9
ToppCellChildren_(3_yrs)-Epithelial-alveolar_epithelial_cell_type_1|Children_(3_yrs) / Lineage, Cell type, age group and donor

WFS1 PPFIBP1 PTPRQ COBL MYO16

1.39e-0418511951c222f7285d6e3dae0354dc7e853ddc0ea55e63e
ToppCellTransplant_Alveoli_and_parenchyma-Immune-Mast_cells|Transplant_Alveoli_and_parenchyma / Tissue, Lineage and Cell class of Lung Cells from 10X

ST3GAL4 PIK3R6 ARHGAP25 CTSW AHNAK2

1.39e-041851195a6e5328801c233a44153420e2cdae644b253f540
ToppCell3'-Child09-12-SmallIntestine-Endothelial-lymphatic_endothelial-LEC3_(ADGRG3+)|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX11 WFS1 PPFIBP1 NALCN MTUS1

1.39e-0418511959de1db2ce9e44956b1214daf6e1e161334679c88
ToppCell3'-Child09-12-SmallIntestine-Endothelial-lymphatic_endothelial|Child09-12 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX11 WFS1 PPFIBP1 NALCN MTUS1

1.39e-04185119518f5d9438c76e37988a7d17aa2a080af6bedbfc4
ToppCellControl-Fibroblasts-Alveolar_FB|Control / group, cell type (main and fine annotations)

CRISPLD2 BNC2 IL16 ADARB1 PGAP1

1.46e-04187119592d468dde81125d51daf7abd4703741abe1ab91c
ToppCellwk_08-11-Hematologic-Myeloid-DC1|wk_08-11 / Celltypes from embryonic and fetal-stage human lung

IL16 CRIP3 PIK3R6 CD74 TBC1D3G

1.46e-0418711952907cc0b8789c5e1468917caa21fa0feb025305e
ToppCellAdult-Epithelial-alveolar_epithelial_cell_type_1|Adult / Lineage, Cell type, age group and donor

WFS1 PPFIBP1 PTPRQ COBL MYO16

1.46e-04187119577f78aec946bc6bd85c29aee9ca978ce49f853a3
ToppCellControl-Fibroblasts-Other_FB|Control / group, cell type (main and fine annotations)

CRISPLD2 BNC2 IL16 ADARB1 NALCN

1.46e-041871195bd3739c4a52aa1ba5deffd778e113a9800f7e158
ToppCellFetal_29-31_weeks-Epithelial-alveolar_epithelial_cell_type_1-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

PRAG1 ASAP2 NRK COBL MYO16

1.50e-04188119543a3a59f92ad93509d4166bd025aed0b1b39a008
ToppCellLV-14._Fibroblast_III|World / Chamber and Cluster_Paper

USP36 CRISPLD2 BNC2 ST3GAL4 PGAP1

1.54e-0418911953922135d1f6fc768d71ba3b465585fead6ea68a8
ToppCellRA-14._Fibroblast_III|RA / Chamber and Cluster_Paper

USP36 CRISPLD2 BNC2 ST3GAL4 PGAP1

1.54e-04189119546e9a58aacd79db5a02898a8c7244e1884adcfd1
ToppCelldroplet-Marrow-BM_(NON-STC)-30m-Hematologic-nan|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

AUNIP PSIP1 BRCA2 CCDC34 UBAC1

1.54e-04189119516dfc37d8d390ed7f927bc844c47c9c5a89a0928
ToppCellRA-14._Fibroblast_III|World / Chamber and Cluster_Paper

USP36 CRISPLD2 BNC2 ST3GAL4 PGAP1

1.54e-041891195b6e12d24d2b0735730bdc625f8318c1c9c2a9b3b
ToppCelldroplet-Marrow-BM_(NON-STC)-30m-Hematologic|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

AUNIP PSIP1 BRCA2 CCDC34 UBAC1

1.54e-0418911953ade3fa9369e85304b20d7233b581f18ad5ecc89
ToppCellLPS-IL1RA-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CRISPLD2 BNC2 ADARB1 KIAA1755 MYO16

1.58e-04190119545df8fee00f8949937863159d7aa042e72748d9b
ToppCellSomatosensory_Cortex_(S1)-Non-neuronal-Endothelial_Myeloid|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

BNC2 SRGAP2 IFI16 CD74 ARHGAP25

1.58e-041901195d4f954e0748898df69e1710df558564db703dd61
ToppCell10x3'2.3-week_12-13-Lymphocytic_B-B_lineage-pro_B_progenitor|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

RAG2 SMARCA5 IFI16 PSIP1 SMARCA4

1.58e-041901195f623f0bdece6002b68ac2207e99408b24a2b1194
ToppCellFetal_29-31_weeks-Mesenchymal-matrix_fibroblast_1_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

CRISPLD2 NUP98 ST3GAL4 PGAP1 MYO16

1.62e-04191119508720998aa55131d7377c4c67c4c935865bd7d79
ToppCelldroplet-Spleen-SPLEEN-30m-Lymphocytic-immature_NKT_cell|Spleen / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

INCENP DACT2 DEPDC1 AUNIP CCDC34

1.62e-041911195c8b99bd3a30c81ee4deba9cbf0196920ab3ab550
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2-AF1|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CRISPLD2 BNC2 IL16 ADARB1 PGAP1

1.62e-0419111956688cee34beee4f151ac17fccbc9c26a9aad72e1
ToppCell10x5'-lymph-node_spleen-Lymphocytic_T_CD4-T_CD4/CD8|lymph-node_spleen / Manually curated celltypes from each tissue

USP36 POLR2A ASH1L ATXN7 ANKRD36

1.65e-04192119547646d7e4990be85072987f92bf18d52f8da752e
ToppCellP07-Mesenchymal-developing_mesenchymal_cell-mesenchymal_proliferating_cell|P07 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

SOX11 INCENP DEPDC1 PSIP1 CCDC34

1.65e-0419211955ef79faddb433c09ff36660d8bf7a3af5a67bf1d
ToppCellnucseq-Mesenchymal-Fibroblastic-Fibroblastic_2|nucseq / Celltype signatures by Technology, Lineage, Lineage_subclass, Celltype_group, Cell_type2

CRISPLD2 BNC2 IL16 ADARB1 PGAP1

1.65e-04192119599ce9e3c4c50cf64ebb62145f2b5420efa0db309
ToppCelldroplet-Pancreas-Endocrine-21m-Epithelial-pancreatic_B_cell|Pancreas / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CRISPLD2 FMO1 WFS1 SEC31A SMARCA4

1.70e-041931195fe451b3295d77b2bd1ac25cf29310c85835a45fe
ToppCell5'-Adult-SmallIntestine-Endothelial-lymphatic_endothelial-LEC3_(ADGRG3+)|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

WFS1 PPFIBP1 NALCN MTUS1 ANKS1A

1.70e-041931195bd0027fa97de41ae22ff64a61c8e217496f122ca
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_2_cell|Children_(3_yrs) / Lineage, Cell type, age group and donor

CRISPLD2 BNC2 IL16 FMO1 KIAA1755

1.70e-0419311959ab47b360bee1d4f1092c2269e58acebe9584021
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_2_cell-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

CRISPLD2 BNC2 IL16 ST3GAL4 KIAA1755

1.70e-041931195261cafc167c86ab277be4ea7f08b0173e2dde26e
ToppCellChildren_(3_yrs)-Mesenchymal-matrix_fibroblast_1_cell-D139|Children_(3_yrs) / Lineage, Cell type, age group and donor

CRISPLD2 BNC2 IL16 ADARB1 PGAP1

1.74e-041941195e93de9428c986b8943fc169258847c650cfab0e5
ToppCellLV-14._Fibroblast_III|LV / Chamber and Cluster_Paper

USP36 CRISPLD2 BNC2 ST3GAL4 PGAP1

1.74e-041941195927c26aea0147f7a4b8fb3f192de4de263f1b978
ToppCellRA|World / Chamber and Cluster_Paper

CRISPLD2 BNC2 ST3GAL4 PGAP1 PTPRQ

1.74e-04194119508f0afbb68a63150fbe107a5337299081c3f69e4
ToppCellE12.5|World / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

SOX11 SET PSIP1 CCDC34 NRK

1.74e-0419411954b335e4da58de1cd94194dc4208ce83854e5e50a
ToppCellLPS-antiTNF-Stromal_mesenchymal-Matrix_Fibroblast-Activated_MatrixFB|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

CRISPLD2 BNC2 ADARB1 KIAA1755 MYO16

1.74e-04194119589b706af2b25991fc2707eb24f49ba6ff3ae01f7
ToppCellASK428-Epithelial-Transformed_epithelium|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

BNC2 IL16 TRO IFI16 PLEKHO2

1.78e-041951195c750602c765a51075ba6ede78e3ba80b62374481
ToppCellcycling_basal_cell|World / shred by cell class for nasal brushing

DEPDC1 AUNIP PSIP1 BRCA2 CCDC34

1.82e-041961195aa7bac70a2fe4a3cb28d89fa1a87c68c2ead1349
ToppCell10x5'v1-week_14-16-Lymphocytic_B|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

RAG2 IFI16 PSIP1 SMARCA4 CD74

1.86e-04197119531dfd9842410b5c629f39b5130233995dceb0aef
ToppCelltumor_Lung-T/NK_cells-CD8+/CD4+_Mixed_Th|T/NK_cells / Location, Cell class and cell subclass

USP36 POLR2A ATXN7 PGAP1 CTSW

1.86e-041971195dcce1c3dc5f3e53c368f758eb0fd5afcd86325e7
ToppCell10x5'v1-week_14-16-Lymphocytic_B-B_lineage|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

RAG2 IFI16 PSIP1 SMARCA4 CD74

1.86e-0419711957290f05d0b8465637420119941bcbf2fae44a7e4
ToppCellASK440-Epithelial-Type_1|Epithelial / Donor, Lineage and Cell class of Lung cells from Dropseq

WFS1 PPFIBP1 MAD2L1BP INF2 ANKS1A

1.86e-041971195782449c522c9e16e72bf999a73090688a3aefe06
ToppCellrenal_cortex_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Monocytic-Monocyte-derived_Cell|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

SRGAP2 IFI16 PRAM1 PIK3R6 CD74

1.86e-041971195826cc6baafab13e7ef5cfcf28cd79d0fbf3af38d
ToppCellH1299-infected-SARSCoV2|infected / Cell line, Condition and Strain

POLR2A CEP350 PSIP1 CCDC34 ANKRD36

1.86e-0419711950fa3e4cf93e77d78b1f97b906c5b13ca741ae17e
ToppCellNS-critical-LOC-Lymphoid-CTL|LOC / Location, Severity, dps_group, Lineage and Cell class of Upper airway (combined)

IL16 PSIP1 MLLT3 ANKRD36 CTSW

1.91e-041981195e2acb074142aa62c763139bbcf36f6f85038d04b
ToppCelldroplet-Marrow-nan-18m-Myeloid-granulocytopoietic_cell|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

RAG2 INCENP DEPDC1 CCDC34 SMARCA4

1.91e-04198119554da18209ad67bf6b6b984786d95962fa90e6e8d
ToppCellsystemic_lupus_erythematosus-flare|systemic_lupus_erythematosus / PBMC cell types (v2) per disease, treatment status, and sex

SMARCA5 ASH1L IFI16 ARHGAP25 ANKRD36

1.91e-0419811954c93ee921d56132d80832d8e94563f32ccf13bbc
ToppCellE16.5-Mesenchymal-Mesenchymal_structural-Fibroblastic-PMP|E16.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

INCENP ADARB1 PSIP1 CCDC34 MLLT3

1.91e-041981195148f5fee19ea8dff7f2de4ca69c3b03e5221985d
ToppCellB_cells-Activate_B_cells|B_cells / Immune cells in Kidney/Urine in Lupus Nephritis

IL16 PRAG1 PSIP1 CD74 ARHGAP25

1.91e-041981195a663082d7fbd6db11d3d3024bbb8ba00183e19f8
ToppCell10x_3'_v2v3-Neoplastic-Differentiated-like-AC-like-AC-like_Prolif-E|10x_3'_v2v3 / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

DEPDC1 PSIP1 BRCA2 CCDC34 PRKDC

1.91e-0419811957225a6194c52b01c581e58d3cda107c4af96dc4f
ToppCellEpithelial_cells-AT1-AT2_cells|Epithelial_cells / lung cells shred on cell class, cell subclass, sample id

WFS1 PPFIBP1 PRAG1 INF2 ANKS1A

1.91e-041981195fbc46b20bcd44f2083170aacbc6f5dd00fba685c
ToppCell(0)_NK_Dividing|World / Lung cell shreds - cell class (v4) and cell subclass (v4)

DEPDC1 AUNIP BRCA2 CCDC34 CTSW

1.91e-0419811955ebb4965b723302152b42bfaf48bb77a57dd02c5
ToppCell(09)_Interm._secr.>cil.-(2)_GFP_FOXI1|(09)_Interm._secr.>cil. / shred by cell type by condition

SEC31A ADNP CEP350 MTUS1 NIPBL

1.95e-041991195fc680f85ebd3bab4c72876a19a461b0afb5f51ce
ToppCellBALF-PFMC-Severe-critical_progression_d12-22_with-steroid-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c10-MKI67-GZMK|Severe-critical_progression_d12-22_with-steroid / Compartment, severity and other cell annotations on 10x 3' data (130k)

INCENP DEPDC1 BRCA2 CCDC34 CTSW

1.95e-041991195616c04b0605907fb218263f2164c36cb2fa26b87
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuroepithelial|6m / Sample Type, Dataset, Time_group, and Cell type.

BNC2 PPFIBP1 SEC31A IFI16 NRK

2.00e-0420011952cc98abf11f5b58707de45a2282f03d47f00f035
ToppCell10x3'2.3-week_14-16-Lymphocytic_B|week_14-16 / cell types per 3 fetal stages;per 3',per 5'

RAG2 IFI16 PSIP1 SMARCA4 CD74

2.00e-04200119519a4213f180ac2d29625d140b602a93a74ab3fdd
ToppCellmetastatic_Lymph_Node-T/NK_cells-Undetermined|T/NK_cells / Location, Cell class and cell subclass

INCENP DEPDC1 AUNIP BRCA2 CCDC34

2.00e-0420011959c2095dcf70f1288d55d0ff4a97efd4fd8d0c9ee
ToppCellSepsis-Int-URO-Lymphocyte-T/NK-T/NK_proliferative|Int-URO / Disease, condition lineage and cell class

INCENP DEPDC1 AUNIP BRCA2 CCDC34

2.00e-04200119599acc1ea01288efdd5b166aa20d66735f2bbe543
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

SMARCA5 ASH1L IFI16 CEP350 NIPBL

2.00e-04200119512f1685ce8f218433068e090c9d839cd5a1910bf
ToppCellcritical-Epithelial-FOXN4+|Epithelial / Severity, Lineage and Cell class of Nasopharyngeal (NS) Samples from Patients and Controls

DEPDC1 CEP350 ASAP2 PSIP1 BRCA2

2.00e-042001195f39db4250ce220a3eb58edee3f7fc3671701d46f
ToppCellBrain_organoid-organoid_Tanaka_cellReport-6m-Neuroepithelial-Proteoglycan-expressing_cell|6m / Sample Type, Dataset, Time_group, and Cell type.

BNC2 PPFIBP1 SEC31A IFI16 NRK

2.00e-0420011950f7431f670f3a175377cefae3479403a881bb8fb
Drughaloperidol; Up 200; 10uM; MCF7; HT_HG-U133A_EA

IRF2 TACC2 ST3GAL4 SRBD1 INF2 MLLT3 NIPBL TOP3A

6.18e-0619611381082_UP
DrugDroperidol [548-73-2]; Up 200; 10.6uM; PC3; HT_HG-U133A

RAG2 IL16 ACADS ADARB1 NF1 INF2 COBL PACRG

6.42e-0619711384629_UP
Diseasediet measurement

BNC2 SLC4A8 TCF20 TOX RAB11FIP2 ADARB1 RIC8B NF1 NALCN INF2 SMARCA4 CACNA1H PRKDC NIPBL MYO16

5.89e-06104910715EFO_0008111
Diseasesevere combined immunodeficiency, autosomal recessive, T cell-negative, B cell-negative, Nk cell-positive (implicated_via_orthology)

RAG2 PRKDC

1.30e-0521072DOID:0090013 (implicated_via_orthology)
Diseasesevere combined immunodeficiency (implicated_via_orthology)

RAG2 PRKDC

3.90e-0531072DOID:627 (implicated_via_orthology)
Diseasepro‐interleukin‐16 measurement

IL16 MLLT3

7.01e-04111072EFO_0010629
Diseaseprediabetes syndrome (biomarker_via_orthology)

SLC4A8 KCNJ11

8.40e-04121072DOID:11716 (biomarker_via_orthology)
DiseasePrecursor T-Cell Lymphoblastic Leukemia-Lymphoma

SET NUP214 SMARCA4

9.52e-04531073C1961099
DiseaseCoffin-Siris syndrome

SOX11 SMARCA4

9.90e-04131072C0265338
DiseaseAcute Myeloid Leukemia, M1

NUP98 NUP214 NF1 PSIP1

1.13e-031251074C0026998
DiseaseAcute Myeloid Leukemia (AML-M2)

NUP98 NUP214 NF1 PSIP1

1.13e-031251074C1879321
DiseaseSarcoma, Spindle Cell

NF1 SMARCA4

1.15e-03141072C0205945
DiseaseSarcoma, Epithelioid

NF1 SMARCA4

1.15e-03141072C0205944
Diseasecannabis dependence

RABEPK TCF20 TOX ACADS

1.50e-031351074EFO_0007191
Diseasecentral nervous system disease (implicated_via_orthology)

SMARCA5 SEC31A

1.51e-03161072DOID:331 (implicated_via_orthology)
Diseasesquamous cell carcinoma

BNC2 RAB11FIP2 BRCA2

1.88e-03671073EFO_0000707
DiseaseCCL4 measurement

TBC1D3 TBC1D3F

2.37e-03201072EFO_0004751
DiseaseSevere Combined Immunodeficiency

RAG2 PRKDC

2.37e-03201072C0085110
Diseasefreckles

BNC2 RAB11FIP2

2.37e-03201072EFO_0003963
DiseaseDrugs used in diabetes use measurement

WFS1 KSR2 NF1 ATXN7 KCNJ11

2.41e-032551075EFO_0009924
Diseasenon-small cell lung carcinoma

BRCA2 NALCN ANKS1A

2.59e-03751073EFO_0003060
DiseaseSarcoma

NF1 SMARCA4

2.62e-03211072C1261473
Diseasesquamous cell lung carcinoma

SRBD1 PRAG1 BRCA2 COBL

3.11e-031651074EFO_0000708
Diseasemalignant astrocytoma (is_marker_for)

IL16 NF1

3.14e-03231072DOID:3069 (is_marker_for)
Diseaseperiodontal measurement

ASH1L IFI16

3.41e-03241072EFO_0007780

Protein segments in the cluster

PeptideGeneStartEntry
KSPLMKQSVKKPPPG

CHRM4

246

P08173
SLKRQPKKPSQPKFM

C2orf16

1336

Q68DN1
KPLMLIAPKPQDKKS

ADNP

266

Q9H2P0
PKRGRPKSKEMPQLE

ASH1L

826

Q9NR48
PKSKEMPQLEGPPKR

ASH1L

831

Q9NR48
LPKISPQKPPRKDME

CCDC148

571

Q8NFR7
RPQGMSKKPQKPKHS

CXorf49;

361

A8MYA2
KSKPIPIMPASPQKG

DNM1L

606

O00429
PMPTPGLTLGKKEDK

ACADS

216

P16219
DLAPKKKPRKSSMPV

BNC2

626

Q6ZN30
PKPMSKEPKPDSNLL

MLLT3

256

P42568
PMPKKLRFNITPEIK

CRAT

376

P43155
KAAMRRKDSPPPGKV

ANKRD36

531

A6QL64
MIETKSSKPVPKPRV

ANKS1A

1081

Q92625
KTLPGMNRPIQVKPA

CELF6

111

Q96J87
PQRVLPLKKPPMKSL

RAG2

491

P55895
KMPKRTKLLAQQPLP

PACRG

16

Q96M98
MKQLPVLEPGDKPRK

RABEPK

1

Q7Z6M1
MLPLSERPSKKGKKP

IRF2

111

P14316
SPLFRNPMSDPKKKE

NUP98

516

P52948
PPPEMPESLKKKLGL

SLC25A3

346

Q00325
LKIDPQMPAKKPKRG

KIAA0100

1491

Q14667
KVPPKPDKAMRAPSS

H1-8

216

Q8IZA3
PSPQAEEMLKKKPRA

MAD2L1BP

101

Q15013
KEPELMPKTPSQKNR

INCENP

51

Q9NQS7
MKTPPKGPSRKNLFT

MTUS1

856

Q9ULD2
PPPSPDSKKKSRGIM

PPFIBP1

576

Q86W92
STMKKIPPRKPKRSP

MYO16

1341

Q9Y6X6
VKTKERNGRLPKPMP

KIAA1755

441

Q5JYT7
PPAPMPRKSQATKLK

ASAP2

931

O43150
VTPPGTPPMRKKNKL

KSR2

271

Q6VAB6
TPPMRKKNKLKPPGT

KSR2

276

Q6VAB6
GPLRKRSVPMAKAKP

KCNJ11

366

Q14654
QPRVMRPTKPKKTSA

CRISPLD2

266

Q9H0B8
EILVRKPMSSKPKPP

IL16

586

Q14005
PPPSLSEVARKMKKK

NIPBL

1161

Q6KC79
DKPTIKQPMLILRKP

DEPDC1

791

Q5TB30
SLPKVPAKLSPMKQA

NUP214

931

P35658
RKTPGPVLPKNALMQ

ADARB1

71

P78563
SVPSSPMSRKPQKLK

ATXN7

661

O15265
AKPKEPTMVAPRARK

INF2

611

Q27J81
TMDIKAPARPKTKPT

PTPRQ

1781

Q9UMZ3
KEMVPAKPPKGLVGR

ILVBL

221

A1L0T0
PPKSKAEKIKRSPMD

DACT2

491

Q5SW24
PIKKKELNSPQMTPF

BRCA2

3311

P51587
MPPPKEAKDLSGRKS

CCDC34

326

Q96HJ3
RVLKGVNKLPPPSVM

FMO1

391

Q01740
VSVKSEMKKRRAPPP

COBL

291

O75128
KPERLPPSMKGKIKS

CTR9

996

Q6PD62
KFPLTARVQKPDMKP

CTSW

356

P56202
KLVKKILGPAPRMEP

CEP350

431

Q5VT06
PLEPKFAKTILMSPK

DHX33

501

Q9H6R0
PSHRMKKKGPSLPRG

ANKMY1

851

Q9P2S6
PATLPRAKKMKGPIK

C17orf80

46

Q9BSJ5
RTGLPQGKKSPPHMK

CRIP3

101

Q6Q6R5
MPVLKQLGPAQPKKR

CDC42EP5

1

Q6NZY7
KTNPRNNDPKSMKLP

IFI16

391

Q16666
ENLRMKLPKPPKPVS

CD74

91

P04233
KKPKVMVPPSSPQEL

FAM186A

2086

A6NE01
TATRPKKMGSQLPKP

FATE1

71

Q969F0
GMKQKRKPASSEPTP

FAM215A

26

Q9Y5M1
EPALGARRKKKMSPP

CACNA1H

2176

O95180
GMPPPKLLEQSKRAK

DYRK3

426

O43781
KPGTKMLTLLPGERK

AUNIP

31

Q9H7T9
KNPVPKRGLAPKPMT

KRBA2

241

Q6ZNG9
GAAEPPVVKRPRKKM

PANX2

416

Q96RD6
KASKPLQMQIKAPPR

NRK

456

Q7Z2Y5
RKKPKMDPSAKPSAS

SOX11

121

P35716
GAKPKRKPGMRPDWK

UTP18

16

Q9Y5J1
KMKAPPKAARKTPGL

POLR3D

231

P05423
APIKEPKKLMPKTSL

SH3D21

141

A4FU49
LIDNRKVPLNPPGKM

LRRC27

401

Q9C0I9
KVPLNPPGKMKPSKE

LRRC27

406

Q9C0I9
AKPKEELLKPMGLKP

RIC8B

481

Q9NVN3
KAKPKPLLMPINTFS

PIK3R6

736

Q5UE93
RKLPGKIDPSMLPAR

MORC4

436

Q8TE76
PPMDPKLLKQLRKAE

PRAM1

556

Q96QH2
LSPNPPNLTKKMKKI

SMARCA4

1451

P51532
KPIVLMKPREEGKGP

SMG9

96

Q9H0W8
MAPKRQSPLPLQKKK

SETSIP

11

P0DME0
MAPKRQSPLPPQKKK

SET

1

Q01105
SLPMQQPRKIKQKPT

ST3GAL4

246

Q11206
KRPSELPKDIKMISP

PGAP1

716

Q75T13
RKMFPGLAAPSLPKK

WIZ

1161

O95785
KNVPSQEKRKMPGVP

SLC4A8

411

Q2Y0W8
PKRMPRVKKNAPQIS

SRBD1

61

Q8N5C6
GHLPKVQRPSLKMPK

AHNAK2

756

Q8IVF2
LPKLQMPSFKVPKVD

AHNAK2

1411

Q8IVF2
LPKLQMPSFKVPKVD

AHNAK2

2236

Q8IVF2
MPSLKTPKVDLKGPQ

AHNAK2

3561

Q8IVF2
LPKLQMPSFKVPKVD

AHNAK2

4381

Q8IVF2
TEVKIPKPRGRPKMV

PSIP1

186

O75475
SMKKLTRKQGDLPPP

TBC1D3B

346

A6NDS4
SMKKLTRKQGDLPPP

TBC1D3H

346

P0C7X1
PLITMPATRPKPKKA

TNRC18

2426

O15417
PGTLPLEKVKRPMNA

SOX15

41

O60248
MEQPPAPKSKLKKLS

STK3

1

Q13188
MEKPAGRKKKTPTPR

ZFP41

1

Q8N8Y5
LAMDPPVVNRPKKSK

TRO

56

Q12816
SMKKLTRKKGDVPPP

TBC1D3F

346

A6NER0
RIFPKIMPKKPAEEG

SSX7

106

Q7RTT5
RIIPKIMPKKPAEEG

SSX8P

106

Q7RTT4
PNPLERPIKMGWLKK

ARHGAP25

41

P42331
PRAMQKSGRPLKSLK

POLR2A

326

P24928
KSVKMAAPVKPPATR

SRGAP2

1026

O75044
MGDKKSPTRPKRQPK

YAF2

1

Q8IY57
PPPRIERGLKLMSKI

NF1

1431

P21359
RPKMKKTPEKLDNTP

TACC2

2301

O95359
SMKKLTRKKGDLPPP

TBC1D3E

346

A0A087X179
QMKSKPKKPFLLGPQ

RAB11FIP2

206

Q7L804
NPPPKRATEMQSKVK

TCF20

1736

Q9UGU0
PPPKSRHLLKMNKSS

PRAG1

716

Q86YV5
LKLKFKRGSLPPTMP

TOP3A

716

Q13472
LLLKMNKDSKPPGNL

PRKDC

3666

P78527
QRSLPVKPSKMLKPS

ZBED9

661

Q6R2W3
TPPPKILSEKLKASM

PLEKHO2

311

Q8TD55
SMKKLTRKQGDLPPP

TBC1D3D

346

A0A087WVF3
LIKKRAPSPLPKMAD

UBAC1

91

Q9BSL1
ELLKKVSTKRPPPAM

PTGES3L

136

E9PB15
QKTPTSPLKMKPGRP

SMARCA5

111

O60264
SPLKMKPGRPRIKKD

SMARCA5

116

O60264
NDPPALNRVPKKKKM

SEC31A

996

O94979
SMKKLTRKQGDLPPP

TBC1D3G

346

Q6DHY5
SMKKLTRKKGDLPPP

TBC1D3

346

Q8IZP1
EKRPASDMGKKPKTP

TOX

236

O94900
TVMKGDPKALRPKPT

ZSCAN5C

206

A6NGD5
SMKKLTRKKGDLPPP

TBC1D3K

346

A0A087X1G2
MSPPPAKKLALSAKK

USP36

681

Q9P275
SMKKLTRKQGDLPPP

TBC1D3I

346

A0A087WXS9
SMKKLTRKKGDLPPP

TBC1D3C

346

Q6IPX1
PGPVPKSLQKQRRML

WFS1

216

O76024
KFPNRPQMVKISKLP

NALCN

636

Q8IZF0