Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyMolecularFunctiontubulin-tyrosine ligase activity

TTLL12 TTL

5.83e-0521532GO:0004835
GeneOntologyBiologicalProcessprotein autophosphorylation

NRG1 ATR PDGFA CAMK2A CAMK2G INSRR NBN MTOR TAF1 FGFR4

7.20e-0622815110GO:0046777
GeneOntologyCellularComponentintracellular protein-containing complex

UBR1 POLR1A CAMK2A MAT1A CAMK2G PSMA3 MARCHF6 PSMC2 POLA2 KLHL20 NCBP3 FBH1 MTOR FBXO31 WDR41 TAF1 TAF2 POTEJ TAF6 TAF1L BTRC TRAPPC9

2.43e-0697215322GO:0140535
GeneOntologyCellularComponentPML body

CASP8AP2 ATR NBN KLHL20 PIAS4 MTOR RPA1

3.80e-051251537GO:0016605
GeneOntologyCellularComponentCOPI vesicle coat

COPA COPG1 COPG2

1.04e-04131533GO:0030126
GeneOntologyCellularComponentnuclear DNA-directed RNA polymerase complex

POLR1A POLA2 TAF1 TAF2 TAF6 TAF1L

1.85e-041131536GO:0055029
GeneOntologyCellularComponentDNA-directed RNA polymerase complex

POLR1A POLA2 TAF1 TAF2 TAF6 TAF1L

2.13e-041161536GO:0000428
GeneOntologyCellularComponentRNA polymerase complex

POLR1A POLA2 TAF1 TAF2 TAF6 TAF1L

2.45e-041191536GO:0030880
GeneOntologyCellularComponenttransferase complex

UBR1 POLR1A MAT1A MARCHF6 INSRR POLA2 KLHL20 PIAS4 FBH1 FBXO31 ALG14 WDR41 TAF1 TAF2 POTEJ TAF6 TAF1L BTRC

2.46e-0496315318GO:1990234
GeneOntologyCellularComponentCOPI-coated vesicle membrane

COPA COPG1 COPG2

3.42e-04191533GO:0030663
GeneOntologyCellularComponenttranscription factor TFIID complex

TAF1 TAF2 TAF6 TAF1L

3.85e-04471534GO:0005669
GeneOntologyCellularComponentcalcium- and calmodulin-dependent protein kinase complex

CAMK2A CAMK2G

5.25e-0451532GO:0005954
GeneOntologyCellularComponentnuclear chromosome

ARID4B INO80 POLA2 ORC5 LRPPRC SUV39H1 RPA1 TOP2A

5.79e-042541538GO:0000228
GeneOntologyCellularComponentnuclear outer membrane-endoplasmic reticulum membrane network

COPA COPG1 OR5D18 VPS13C CAMK2G TPTE2 CYP26A1 MARCHF6 AGPAT3 POR COPG2 HHATL NBAS KSR1 LRPPRC UBA1 GUCY2C MTOR ALG14 SLC22A3 CYP26C1

6.88e-04132715321GO:0042175
GeneOntologyCellularComponenttransferase complex, transferring phosphorus-containing groups

POLR1A INSRR POLA2 ALG14 WDR41 TAF1 TAF2 TAF6 TAF1L

8.29e-043351539GO:0061695
GeneOntologyCellularComponentGolgi-associated vesicle membrane

SYNRG COPA COPG1 COPG2

1.04e-03611534GO:0030660
GeneOntologyCellularComponentvesicle coat

SYNRG COPA COPG1 COPG2

1.48e-03671534GO:0030120
GeneOntologyCellularComponentMLL1 complex

TAF1 TAF6 TAF1L

1.63e-03321533GO:0071339
GeneOntologyCellularComponentCOPI-coated vesicle

COPA COPG1 COPG2

1.79e-03331533GO:0030137
GeneOntologyCellularComponentMLL1/2 complex

TAF1 TAF6 TAF1L

1.79e-03331533GO:0044665
DomainTFIID_sub1_DUF3591

TAF1 TAF1L

6.41e-0521502IPR022591
DomainCoatomer_g_Cpla

COPG1 COPG2

6.41e-0521502IPR032154
DomainTBP-binding

TAF1 TAF1L

6.41e-0521502PF09247
Domain-

COPG1 COPG2

6.41e-05215022.60.40.1480
DomainDUF3591

TAF1 TAF1L

6.41e-0521502PF12157
DomainCOP-gamma_platf

COPG1 COPG2

6.41e-0521502PF08752
DomainCoatomer_g_Cpla

COPG1 COPG2

6.41e-0521502PF16381
DomainCoatomer_gsu_app_Ig-like-sub

COPG1 COPG2

6.41e-0521502IPR013040
DomainTAF_II_230-bd

TAF1 TAF1L

6.41e-0521502IPR009067
Domain-

TAF1 TAF1L

6.41e-05215021.10.1100.10
DomainCoatomer_gsu

COPG1 COPG2

6.41e-0521502IPR017106
DomainTAF1_animal

TAF1 TAF1L

6.41e-0521502IPR011177
DomainNeuregulin_C

NRG1 NRG2

1.91e-0431502IPR002154
DomainNeuregulin

NRG1 NRG2

1.91e-0431502PF02158
DomainF-box_dom

FBXW10B FBXW10 FBH1 FBXO31 BTRC

3.43e-04751505IPR001810
Domain-

FBXW10B FBXW10 WDR64 COPA CFAP43 NBAS ZNF106 WDR41 BTRC PLXNA1

3.66e-04333150102.130.10.10
DomainCaMKII_AD

CAMK2A CAMK2G

3.80e-0441502PF08332
DomainClathrin_a/coatomer_app_sub_C

COPG1 COPG2

3.80e-0441502IPR015873
DomainCa/CaM-dep_prot_kinase-assoc

CAMK2A CAMK2G

3.80e-0441502IPR013543
Domain-

COPG1 COPG2

3.80e-04415023.30.310.30
DomainWD40/YVTN_repeat-like_dom

FBXW10B FBXW10 WDR64 COPA CFAP43 NBAS ZNF106 WDR41 BTRC PLXNA1

3.84e-0433515010IPR015943
DomainWD_REPEATS_1

FBXW10B FBXW10 WDR64 COPA CFAP43 NBAS ZNF106 WDR41 BTRC

4.20e-042781509PS00678
DomainWD_REPEATS_2

FBXW10B FBXW10 WDR64 COPA CFAP43 NBAS ZNF106 WDR41 BTRC

4.31e-042791509PS50082
DomainWD_REPEATS_REGION

FBXW10B FBXW10 WDR64 COPA CFAP43 NBAS ZNF106 WDR41 BTRC

4.31e-042791509PS50294
DomainKinase-like_dom

TRPM6 ATR CAMK2A CAMK2G INSRR ARHGAP35 STK31 KSR1 GUCY2C MTOR MACF1 FGFR4 PKN3

4.38e-0454215013IPR011009
DomainG-protein_beta_WD-40_rep

FBXW10B FBXW10 COPA WDR41 BTRC

6.12e-04851505IPR020472
DomainFATC

ATR MTOR

6.31e-0451502PF02260
DomainFF_domain

ARHGAP35 TCERG1

9.41e-0461502IPR002713
DomainFF

ARHGAP35 TCERG1

9.41e-0461502PS51676
DomainFF

ARHGAP35 TCERG1

9.41e-0461502PF01846
DomainFF

ARHGAP35 TCERG1

9.41e-0461502SM00441
DomainFAT

ATR MTOR

9.41e-0461502PS51189
DomainFATC

ATR MTOR

9.41e-0461502PS51190
DomainFAT

ATR MTOR

9.41e-0461502PF02259
DomainPIK-rel_kinase_FAT

ATR MTOR

9.41e-0461502IPR003151
DomainFATC_dom

ATR MTOR

9.41e-0461502IPR003152
DomainPIK_FAT

ATR MTOR

9.41e-0461502IPR014009
DomainFATC

ATR MTOR

9.41e-0461502SM01343
Domain-

TDRD9 ERCC6L PSMC2 INO80 ARHGAP35 IFIH1 ORC5 CTPS2 MDN1 GIMAP8 FBH1 RAB39A DDX60L CHST2 CHST7

9.98e-04746150153.40.50.300
DomainTUDOR

ARID4B TDRD9 STK31

1.29e-03271503SM00333
DomainCarbohydrate_sulfotransferase

CHST2 CHST7

1.31e-0371502IPR016469
DomainP-loop_NTPase

TDRD9 ERCC6L MYO9B PSMC2 INO80 ARHGAP35 IFIH1 ORC5 CTPS2 MDN1 GIMAP8 FBH1 RAB39A DDX60L CHST2 CHST7

1.32e-0384815016IPR027417
DomainWD40

FBXW10B FBXW10 WDR64 COPA CFAP43 ZNF106 WDR41 BTRC

1.48e-032681508SM00320
DomainWD40_repeat

FBXW10B FBXW10 WDR64 COPA CFAP43 ZNF106 WDR41 BTRC

1.62e-032721508IPR001680
DomainHelicase_C

TDRD9 ERCC6L INO80 IFIH1 DDX60L

1.72e-031071505PF00271
DomainHELICc

TDRD9 ERCC6L INO80 IFIH1 DDX60L

1.72e-031071505SM00490
DomainDUF1669

FAM83F FAM83D

1.74e-0381502PF07894
DomainDUF1669

FAM83F FAM83D

1.74e-0381502IPR012461
DomainCoatomer/calthrin_app_sub_C

COPG1 COPG2

1.74e-0381502IPR009028
DomainTudor

ARID4B TDRD9 STK31

1.76e-03301503IPR002999
DomainHelicase_C

TDRD9 ERCC6L INO80 IFIH1 DDX60L

1.79e-031081505IPR001650
DomainHELICASE_CTER

TDRD9 ERCC6L INO80 IFIH1 DDX60L

1.87e-031091505PS51194
DomainHELICASE_ATP_BIND_1

TDRD9 ERCC6L INO80 IFIH1 DDX60L

1.87e-031091505PS51192
DomainDEXDc

TDRD9 ERCC6L INO80 IFIH1 DDX60L

1.87e-031091505SM00487
DomainHelicase_ATP-bd

TDRD9 ERCC6L INO80 IFIH1 DDX60L

1.95e-031101505IPR014001
DomainHEAT_REPEAT

ATR COPG1 COPG2 MTOR

2.43e-03701504PS50077
PathwayREACTOME_DISEASES_OF_SIGNAL_TRANSDUCTION_BY_GROWTH_FACTOR_RECEPTORS_AND_SECOND_MESSENGERS

PIK3AP1 NRG1 SPRED2 HDAC4 PDGFA CAMK2A CAMK2G PSMA3 PSMC2 NRG2 KSR1 HEYL MTOR MIB1 FGFR4 VCL

1.10e-0646411516M27547
PathwayREACTOME_REGULATION_OF_TP53_ACTIVITY_THROUGH_PHOSPHORYLATION

ATR NBN TAF1 TAF2 TAF6 RPA1 TAF1L

9.90e-06921157M27636
PathwayREACTOME_MAPK_FAMILY_SIGNALING_CASCADES

NRG1 SPRED2 PDGFA CAMK2A CAMK2G PSMA3 PSMC2 NRG2 KSR1 PTPRA FGFR4 VCL

1.44e-0532711512M27565
PathwayREACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION

GPLD1 CASP8AP2 USP18 FBXW10 HDAC4 COPA COPG1 PSMA3 MARCHF6 PSMC2 COPG2 B3GNT7 INO80 KLHL20 TTLL12 PIAS4 IFIH1 UBA1 IGFBP1 FBXO31 ALG14 TTL ADAMTS20 RAB39A RPA1 BTRC TRAPPC9 TOP2A

1.49e-05147511528M19806
PathwayREACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION

GPLD1 CASP8AP2 USP18 FBXW10B FBXW10 HDAC4 COPA COPG1 PSMA3 PSMC2 COPG2 B3GNT7 INO80 KLHL20 TTLL12 PIAS4 IFIH1 UBA1 IGFBP1 FBXO31 ALG14 ADAMTS20 RAB39A RPA1 TRAPPC9 TOP2A

4.15e-05138911526MM15307
PathwayREACTOME_REGULATION_OF_TP53_ACTIVITY

ATR NBN MTOR TAF1 TAF2 TAF6 RPA1 TAF1L

4.89e-051601158M27498
PathwayREACTOME_MAPK_FAMILY_SIGNALING_CASCADES

NRG1 SPRED2 PDGFA CAMK2A CAMK2G PSMA3 PSMC2 KSR1 PTPRA FGFR4 VCL

5.72e-0531811511MM15278
PathwayREACTOME_REGULATION_OF_TP53_ACTIVITY_THROUGH_PHOSPHORYLATION

NBN TAF1 TAF2 TAF6 RPA1 TAF1L

1.04e-04921156MM15338
PathwayKEGG_BASAL_TRANSCRIPTION_FACTORS

TAF1 TAF2 TAF6 TAF1L

1.81e-04351154M4864
PathwayREACTOME_INTRACELLULAR_SIGNALING_BY_SECOND_MESSENGERS

PIK3AP1 NRG1 PDGFA CAMK2A CAMK2G PSMA3 PSMC2 NRG2 MTOR FGFR4

2.40e-0431311510M27867
PathwayREACTOME_PI3K_AKT_SIGNALING_IN_CANCER

PIK3AP1 NRG1 PDGFA NRG2 MTOR FGFR4

2.78e-041101156M27162
PathwayREACTOME_REGULATION_OF_TP53_ACTIVITY

NBN MTOR TAF1 TAF2 TAF6 RPA1 TAF1L

2.98e-041571157MM15226
PathwayPID_IFNG_PATHWAY

CAMK2A CAMK2G PIAS4 MTOR

3.06e-04401154M161
PathwayKEGG_MEDICUS_REFERENCE_PDGF_PDGFR_PLCG_CAMK_SIGNALING_PATHWAY

PDGFA CAMK2A CAMK2G

3.31e-04171153M47387
PathwayREACTOME_G2_M_CHECKPOINTS

ATR PSMA3 PSMC2 NBN PIAS4 ORC5 RPA1

4.33e-041671157M19381
PathwayREACTOME_SIGNALING_BY_MODERATE_KINASE_ACTIVITY_BRAF_MUTANTS

CAMK2A CAMK2G KSR1 VCL

4.84e-04451154M27623
PathwayWP_ERBB_SIGNALING_PATHWAY

NRG1 CAMK2A NRG2 MTOR

5.27e-04461154MM15950
PathwayREACTOME_ONCOGENIC_MAPK_SIGNALING

SPRED2 CAMK2A CAMK2G KSR1 VCL

5.48e-04821155M27626
PathwayWP_ATM_SIGNALING_IN_DEVELOPMENT_AND_DISEASE

HDAC4 ATR NBN MTOR

5.72e-04471154M39518
PathwayREACTOME_HIV_TRANSCRIPTION_INITIATION

TAF1 TAF2 TAF6 TAF1L

5.72e-04471154M29568
PathwayPID_FANCONI_PATHWAY

ATR NBN FANCB RPA1

5.72e-04471154M1
PathwayREACTOME_CONSTITUTIVE_SIGNALING_BY_ABERRANT_PI3K_IN_CANCER

PIK3AP1 NRG1 PDGFA NRG2 FGFR4

5.79e-04831155M27163
PathwayREACTOME_HIV_INFECTION

DOCK2 PSMA3 PSMC2 TAF1 TAF2 TAF6 TAF1L BTRC

6.05e-042311158M12469
PathwayREACTOME_RNA_POLYMERASE_II_PROMOTER_ESCAPE

TAF1 TAF2 TAF6 TAF1L

6.20e-04481154MM15424
PathwayKEGG_MEDICUS_VARIANT_MUTATION_INACTIVATED_ERBB4_TO_NRG_ERBB4_PI3K_SIGNALING_PATHWAY

NRG1 NRG2

6.49e-0451152M48991
PathwayREACTOME_GRB7_EVENTS_IN_ERBB2_SIGNALING

NRG1 NRG2

6.49e-0451152M26937
PathwayREACTOME_GOLGI_TO_ER_RETROGRADE_TRANSPORT

COPA COPG1 AGPAT3 COPG2 BICD1 NBAS

7.06e-041311156MM15497
PathwayKEGG_ERBB_SIGNALING_PATHWAY

NRG1 CAMK2A CAMK2G NRG2 MTOR

7.18e-04871155M12467
PathwayREACTOME_GOLGI_TO_ER_RETROGRADE_TRANSPORT

COPA COPG1 AGPAT3 COPG2 BICD1 NBAS

7.95e-041341156M27751
PathwayKEGG_MEDICUS_REFERENCE_COPI_VESICLE_FORMATION

COPA COPG1 COPG2

8.31e-04231153M47772
PathwayREACTOME_LONG_TERM_POTENTIATION

NRG1 CAMK2A CAMK2G

8.31e-04231153M27949
PathwayREACTOME_HSF1_DEPENDENT_TRANSACTIVATION

CAMK2A CAMK2G MTOR

8.31e-04231153MM14953
PathwayREACTOME_INTRA_GOLGI_AND_RETROGRADE_GOLGI_TO_ER_TRAFFIC

COPA COPG1 AGPAT3 COPG2 BICD1 NBAS RAB39A

9.03e-041891157MM15356
PathwayWP_ERBB_SIGNALING

NRG1 CAMK2A CAMK2G NRG2 MTOR

9.26e-04921155M39715
PathwayREACTOME_VITAMINS

CYP26A1 CYP26C1

9.69e-0461152M27125
PathwayREACTOME_VITAMINS

CYP26A1 CYP26C1

9.69e-0461152MM14840
PathwayREACTOME_G2_M_CHECKPOINTS

PSMA3 PSMC2 NBN PIAS4 ORC5 RPA1

1.12e-031431156MM15383
PathwayREACTOME_DNA_REPLICATION_PRE_INITIATION

PSMA3 PSMC2 POLA2 ORC5 RPA1

1.17e-03971155MM15369
Pubmed

Paralog knockout profiling identifies DUSP4 and DUSP6 as a digenic dependence in MAPK pathway-driven cancers.

TRPM6 SOX9 USP18 FBXW10B FBXW10 KLHL28 ATP8A2 CAMK2G TPTE2 KLHL20 EIF3CL PTP4A1 PIAS4 UBA1 PTPRA SUV39H1 TAF1 TAF1L PLXNA1

7.81e-107301551934857952
Pubmed

Large-scale characterization of HeLa cell nuclear phosphoproteins.

UBR1 SYNRG ARID4B ATR COPA ERCC6L PSMA3 NBN ARHGAP35 POLA2 EXOSC2 EIF3CL ZNF106 UBA1 MDN1 SVIL TAF6 TOP2A ARHGEF6

2.04e-097741551915302935
Pubmed

A central chaperone-like role for 14-3-3 proteins in human cells.

SYNRG HDAC4 ERCC6L CAMK2A TTLL12 KSR1 ZNF106 LRPPRC C2CD3 MDN1 TCERG1 SYNJ2 MTOR SYDE2 SVIL MACF1 TRAPPC9 EDRF1

6.39e-088611551836931259
Pubmed

NBS1 mediates ATR-dependent RPA hyperphosphorylation following replication-fork stall and collapse.

ATR NBN RPA1

8.68e-083155318003706
Pubmed

Synthetic Lethal and Resistance Interactions with BET Bromodomain Inhibitors in Triple-Negative Breast Cancer.

SOX9 CASP8AP2 POLR1A ATR COPA PSMA3 NBN INO80 POLA2 EXOSC2 UBA1 MDN1 TCERG1 CPNE1 TAF1 TAF2 TAF6 RPA1 TOP2A

1.47e-0710141551932416067
Pubmed

Proteomic profiling of VCP substrates links VCP to K6-linked ubiquitylation and c-Myc function.

UBR1 POLR1A COPA COPG1 MYO9B CAMK2G PSMA3 PSMC2 LRPPRC UBA1 MDN1 TCERG1 MIB1 SNX27 MACF1 DDX60L TAF2 RPA1 CAPRIN1 BTRC TOP2A VCL

1.65e-0713531552229467282
Pubmed

A Degradation Motif in STAU1 Defines a Novel Family of Proteins Involved in Inflammation.

SYNRG POLR1A COPA COPG1 CAMK2G NBN INO80 ARHGAP35 EXOSC2 UBA1 SYNJ2 FAM83D MACF1 TAF2 CAPRIN1 VCL

1.72e-077241551636232890
Pubmed

The human cytoplasmic dynein interactome reveals novel activators of motility.

PIK3AP1 SYNRG VPS13C PSMC2 NBN EXOSC2 BICD1 C2CD3 SYNJ2 SLC25A15 SVIL MIB1 TAF2 RINL NEURL4 TOP2A VCL

2.97e-078531551728718761
Pubmed

Direct interaction between hnRNP-M and CDC5L/PLRG1 proteins affects alternative splice site choice.

DOCK2 NRG1 ATR COPA COPG1 ERCC6L PSMC2 NBN COPG2 ORC5 MDN1 MACF1 RPA1 TOP2A

3.86e-075821551420467437
Pubmed

Gain of Additional BIRC3 Protein Functions through 3'-UTR-Mediated Protein Complex Formation.

TRPM6 POLR1A ATR COPA COPG1 VPS13C PSMA3 POR MRPS35 EIF3CL TTLL12 LRPPRC UBA1 MDN1 TCERG1 MTOR CHST2 RPA1 CAPRIN1 PLXNA1 TOP2A VCL

3.97e-0714251552230948266
Pubmed

The TBN protein, which is essential for early embryonic mouse development, is an inducible TAFII implicated in adipogenesis.

TAF1 TAF2 TAF6 TAF1L

4.99e-0715155414580349
Pubmed

Tumor suppressor BAP1 nuclear import is governed by transportin-1.

COPA COPG1 CAMK2G PSMA3 PSMC2 MRPS35 COPG2 EXOSC2 EIF3CL TTLL12 LRPPRC UBA1 MDN1 TCERG1 SVIL MACF1 RPA1 CAPRIN1 VCL

9.67e-0711491551935446349
Pubmed

Systematic analysis of human protein complexes identifies chromosome segregation proteins.

COPA COPG1 ERCC6L MRPS35 EIF3CL TTLL12 ORC5 NBAS FANCB ZNF106 UBA1 SYNJ2 SVIL MIB1 FAM83D CAPRIN1 NEURL4 TOP2A VCL

1.04e-0611551551920360068
Pubmed

TNF-α inhibits glucocorticoid receptor-induced gene expression by reshaping the GR nuclear cofactor profile.

FAT4 WDR64 ARID4B ERCC6L CAMK2G MRPS35 NBN STK31 MDN1 TMTC3 UNC5C MIB1 TAF2 POTEJ

1.15e-066381551431182584
Pubmed

A multi-factor trafficking site on the spliceosome remodeling enzyme BRR2 recruits C9ORF78 to regulate alternative splicing.

COPA COPG1 PSMC2 NBN COPG2 POLA2 ORC5 LRPPRC TCERG1 GLG1 RAB39A WDR41 TOP2A

1.52e-065601551335241646
Pubmed

Cloning and expression of human TAFII250: a TBP-associated factor implicated in cell-cycle regulation.

TAF1 TAF2 TAF6

1.72e-06615537680771
Pubmed

An organelle-specific protein landscape identifies novel diseases and molecular mechanisms.

HDAC4 CAMK2A AGPAT3 MRPS35 EXOSC2 EIF3CL FANCB KSR1 LRPPRC UBA1 MTOR SNX27 RAB39A RPA1 NEURL4 TRAPPC9 EDRF1 ARHGEF6 PKN3 VCL

1.90e-0613211552027173435
Pubmed

Identification of SUMO Binding Proteins Enriched after Covalent Photo-Cross-Linking.

COPA COPG1 TTLL12 PIAS4 UBA1 MDN1 TCERG1 SNX27 TAF1 TOP2A

2.65e-063321551032786267
Pubmed

Pro-prion, as a membrane adaptor protein for E3 ligase c-Cbl, facilitates the ubiquitination of IGF-1R, promoting melanoma metastasis.

NRG1 ERCC6L PSMC2 POR MRPS35 COL25A1 ARHGAP35 KSR1 MDN1 SVIL INTS15 MIB1 TAF2 TAF1L

2.80e-066891551436543142
Pubmed

Molecular cloning and expression of the 32-kDa subunit of human TFIID reveals interactions with VP16 and TFIIB that mediate transcriptional activation.

TAF1 TAF2 TAF6

3.00e-06715537597030
Pubmed

The Mre11-Rad50-Nbs1 complex acts both upstream and downstream of ataxia telangiectasia mutated and Rad3-related protein (ATR) to regulate the S-phase checkpoint following UV treatment.

ATR NBN RPA1

3.00e-067155317526493
Pubmed

BRIT1 regulates early DNA damage response, chromosomal integrity, and cancer.

ATR NBN RPA1

3.00e-067155316872911
Pubmed

HERC5/IFI16/p53 signaling mediates breast cancer cell proliferation and migration.

UBR1 UBA1 FBXO31 MIB1 CAPRIN1 BTRC

3.25e-0690155635671810
Pubmed

The in vivo Interaction Landscape of Histones H3.1 and H3.3.

SOX9 ARID4B INO80 POLA2 EXOSC2 NCBP3 PIAS4 ORC5 SUV39H1 TAF1 TAF2 RPA1 TOP2A

3.72e-066081551336089195
Pubmed

LRRC31 inhibits DNA repair and sensitizes breast cancer brain metastasis to radiation therapy.

ATR COPA MYO9B NBAS TMTC3 MTOR CAPRIN1 NEURL4

3.74e-06202155833005030
Pubmed

Evolutionarily conserved regulators of tau identify targets for new therapies.

COPA COPG1 PSMA3 MARCHF6 PSMC2 POR PTP4A1 GLG1 RAB39A FGFR4 PLXNA1 VCL

3.82e-065161551236610398
Pubmed

Novel isotypic gamma/zeta subunits reveal three coatomer complexes in mammals.

COPA COPG1 COPG2

4.78e-068155314729954
Pubmed

In vivo assembly of coatomer, the COP-I coat precursor.

COPA COPG1 COPG2

4.78e-06815538940050
Pubmed

Phenotypic and Interaction Profiling of the Human Phosphatases Identifies Diverse Mitotic Regulators.

COPA TPTE2 PSMC2 POR NBN COPG2 PTPRT PTP4A1 UBA1 C2CD3 PTPRA SVIL MIB1 SNX27 RPA1 NEURL4 BTRC

4.89e-0610491551727880917
Pubmed

Identification of proximal SUMO-dependent interactors using SUMO-ID.

SYNRG ERCC6L NBN PIAS4 ZNF106 UBA1 TCERG1 TAF6 RPA1 CAPRIN1 TOP2A

5.41e-064441551134795231
Pubmed

The Hsp70-Hsp90 co-chaperone Hop/Stip1 shifts the proteostatic balance from folding towards degradation.

COPA COPG1 ERCC6L PSMA3 PSMC2 COPG2 TTLL12 LRPPRC UBA1 MDN1 TCERG1 MTOR RPA1

6.24e-066381551333239621
Pubmed

SRCAP complex promotes lung cancer progression by reprograming the oncogenic transcription of Hippo-YAP/TAZ signaling pathway.

SYNRG ERCC6L PSMC2 NBN ARHGAP35 UBA1 TCERG1 TAF1 TAF2 TAF6 TOP2A VCL

7.14e-065491551238280479
Pubmed

The intracellular localisation of TAF7L, a paralogue of transcription factor TFIID subunit TAF7, is developmentally regulated during male germ-cell differentiation.

TAF1 TAF6 TAF1L

7.15e-069155312665565
Pubmed

A single binding site for dilysine retrieval motifs and p23 within the gamma subunit of coatomer.

COPA COPG1 COPG2

7.15e-06915539751720
Pubmed

COP I domains required for coatomer integrity, and novel interactions with ARF and ARF-GAP.

COPA COPG1 COPG2

7.15e-069155310921873
Pubmed

∆F508 CFTR interactome remodelling promotes rescue of cystic fibrosis.

COPA COPG1 PSMA3 PSMC2 COPG2 LRPPRC UBA1 MDN1 MTOR SNX27 CPNE1 TOP2A VCL

7.25e-066471551326618866
Pubmed

Functional proteomics establishes the interaction of SIRT7 with chromatin remodeling complexes and expands its role in regulation of RNA polymerase I transcription.

POLR1A COPA COPG1 PSMC2 COPG2 TTF1 TTLL12 LRPPRC MDN1 MTOR MACF1 CAPRIN1 VCL

8.00e-066531551322586326
Pubmed

Acquisition of cellular properties during alveolar formation requires differential activity and distribution of mitochondria.

SOX9 PDGFA LRPPRC

1.02e-0510155335384838
Pubmed

WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

POLR1A NBN INO80 LRPPRC UBA1 MDN1 TAF1 TAF6 RPA1 TOP2A

1.19e-053941551027248496
Pubmed

GOLPH3 and GOLPH3L are broad-spectrum COPI adaptors for sorting into intra-Golgi transport vesicles.

COPA COPG1 COPG2 GLG1

1.24e-0532155434473204
Pubmed

KAP1 facilitates reinstatement of heterochromatin after DNA replication.

POLR1A COPA COPG1 PSMC2 MRPS35 COPG2 NBAS CTPS2 MTOR SUV39H1 SNX27 RPA1 TOP2A

1.77e-057041551329955894
Pubmed

Correction: RDH10-mediated retinol metabolism and RARα-mediated retinoic acid signaling are required for submandibular salivary gland initiation (doi: 10.1242/dev.164822).

SOX9 CYP26A1 CYP26C1

1.85e-0512155330166332
Pubmed

A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease.

PIK3AP1 MAT1A CAMK2G CFAP43 ADAM8 FBH1 SVIL CYP26C1 BTRC VCL

1.85e-054151551016385451
Pubmed

CYLD Regulates Centriolar Satellites Proteostasis by Counteracting the E3 Ligase MIB1.

COPA COPG1 EXOSC2 GLG1 MIB1 RPA1 CAPRIN1

1.86e-05182155731067453
Pubmed

SOX9 Transcriptionally Regulates mTOR-Induced Proliferation of Basal Cell Carcinomas.

SOX9 MTOR

1.97e-052155229550418
Pubmed

PlexinA1 deficiency in BALB/cAJ mice leads to excessive self-grooming and reduced prepulse inhibition.

GAD1 PLXNA1

1.97e-052155233163687
Pubmed

The ZATT-TOP2A-PICH Axis Drives Extensive Replication Fork Reversal to Promote Genome Stability.

ERCC6L TOP2A

1.97e-052155233296677
Pubmed

Taf1 knockout is lethal in embryonic male mice and heterozygous females show weight and movement disorders.

TAF1 TAF1L

1.97e-052155238804708
Pubmed

ATR prohibits replication catastrophe by preventing global exhaustion of RPA.

ATR RPA1

1.97e-052155224267891
Pubmed

Sustained expression of a neuron-specific isoform of the Taf1 gene in development stages and aging in mice.

TAF1 TAF1L

1.97e-052155222842574
Pubmed

NRG1 and NRG2 fusion positive solid tumor malignancies: a paradigm of ligand-fusion oncogenesis.

NRG1 NRG2

1.97e-052155234996744
Pubmed

CaMKII is essential for the function of the enteric nervous system.

CAMK2A CAMK2G

1.97e-052155222952977
Pubmed

Frameshift Mutations in the Mononucleotide Repeats of TAF1 and TAF1L Genes in Gastric and Colorectal Cancers with Regional Heterogeneity.

TAF1 TAF1L

1.97e-052155227571988
Pubmed

Striatal Cholinergic Dysregulation after Neonatal Decrease in X-Linked Dystonia Parkinsonism-Related TAF1 Isoforms.

TAF1 TAF1L

1.97e-052155234403156
Pubmed

Phospholipase D and the maintenance of phosphatidic acid levels for regulation of mammalian target of rapamycin (mTOR).

GPLD1 MTOR

1.97e-052155224990952
Pubmed

Opposing HDAC4 nuclear fluxes due to phosphorylation by β-adrenergic activated protein kinase A or by activity or Epac activated CaMKII in skeletal muscle fibres.

HDAC4 CAMK2A

1.97e-052155223652597
Pubmed

BCAP links IL-1R to the PI3K-mTOR pathway and regulates pathogenic Th17 cell differentiation.

PIK3AP1 MTOR

1.97e-052155230093533
Pubmed

In vitro analysis of the role of replication protein A (RPA) and RPA phosphorylation in ATR-mediated checkpoint signaling.

ATR RPA1

1.97e-052155222948311
Pubmed

Hypoxia Increases IGFBP-1 Phosphorylation Mediated by mTOR Inhibition.

IGFBP1 MTOR

1.97e-052155226714229
Pubmed

Bioactive recombinant neuregulin-1, -2, and -3 expressed in Escherichia coli.

NRG1 NRG2

1.97e-052155215039062
Pubmed

Phylogenetic relationships of the seven coat protein subunits of the coatomer complex, and comparative sequence analysis of murine xenin and proxenin.

COPA COPG2

1.97e-052155211530856
Pubmed

FBXW10 promotes hepatocarcinogenesis in male patients and mice.

FBXW10B FBXW10

1.97e-052155231400758
Pubmed

PICH promotes sister chromatid disjunction and co-operates with topoisomerase II in mitosis.

ERCC6L TOP2A

1.97e-052155226643143
Pubmed

Depletion of topoisomerase IIalpha leads to shortening of the metaphase interkinetochore distance and abnormal persistence of PICH-coated anaphase threads.

ERCC6L TOP2A

1.97e-052155217956945
Pubmed

Elevated FBXW10 drives hepatocellular carcinoma tumorigenesis via AR-VRK2 phosphorylation-dependent GAPDH ubiquitination in male transgenic mice.

FBXW10B FBXW10

1.97e-052155237450367
Pubmed

DNA binding site selection by RNA polymerase II TAFs: a TAF(II)250-TAF(II)150 complex recognizes the initiator.

TAF1 TAF2

1.97e-052155210469661
Pubmed

TAFII250, Egr-1, and D-type cyclin expression in mice and neonatal rat cardiomyocytes treated with doxorubicin.

TAF1 TAF1L

1.97e-052155210070062
Pubmed

NBS1 directly activates ATR independently of MRE11 and TOPBP1.

ATR NBN

1.97e-052155223368512
Pubmed

Nbs1 is required for ATR-dependent phosphorylation events.

ATR NBN

1.97e-052155215616588
Pubmed

RDH10-mediated retinol metabolism and RARα-mediated retinoic acid signaling are required for submandibular salivary gland initiation.

SOX9 CYP26A1 CYP26C1

2.40e-0513155329986869
Pubmed

Interactome Rewiring Following Pharmacological Targeting of BET Bromodomains.

MYO9B INO80 EIF3CL PIAS4 MDN1 TCERG1 TAF1 TAF2 TAF6 NEURL4 TOP2A

2.94e-055331551130554943
Pubmed

Host E3 ligase HUWE1 attenuates the proapoptotic activity of the MERS-CoV accessory protein ORF3 by promoting its ubiquitin-dependent degradation.

POLR1A COPA PSMA3 PSMC2 NBN COPG2 TTLL12 LRPPRC UBA1 SNX27 RPA1

2.99e-055341551135032548
Pubmed

Structure of promoter-bound TFIID and model of human pre-initiation complex assembly.

TAF1 TAF2 TAF6

3.05e-0514155327007846
Pubmed

FBH1 promotes DNA double-strand breakage and apoptosis in response to DNA replication stress.

FBH1 FBXO31 RPA1

3.05e-0514155323319600
Pubmed

Human TFIID binds to core promoter DNA in a reorganized structural state.

TAF1 TAF2 TAF6

3.05e-0514155323332750
Pubmed

MKRN2 Physically Interacts with GLE1 to Regulate mRNA Export and Zebrafish Retinal Development.

HDAC4 PSMA3 PTPRA MTOR UNC5C MIB1 MACF1 TAF1 TOP2A

3.53e-05358155932460013
Pubmed

Comprehensive interactome profiling of the human Hsp70 network highlights functional differentiation of J domains.

CASP8AP2 POR MRPS35 NBN NCBP3 TTLL12 NBAS LRPPRC MDN1 TMTC3 GLG1 SLC25A15 MIB1 MACF1 WDR41 CAPRIN1 NEURL4 EDRF1 VCL

3.72e-0514871551933957083
Pubmed

Proteomic analysis and identification of cellular interactors of the giant ubiquitin ligase HERC2.

COPA COPG1 MYO9B COPG2 BICD1 NEURL4

3.92e-05139155625476789
Pubmed

Dominant and redundant functions of TFIID involved in the regulation of hepatic genes.

IGFBP1 TAF1 TAF6 TAF1L

4.09e-0543155418722179
Pubmed

Mutations in the carboxy-terminal domain of TBP affect the synthesis of human immunodeficiency virus type 1 full-length and short transcripts similarly.

TAF1 TAF2 TAF6

4.66e-051615538764009
Pubmed

Wild-type and transactivation-defective mutants of human immunodeficiency virus type 1 Tat protein bind human TATA-binding protein in vitro.

TAF1 TAF2 TAF6

4.66e-051615538680883
Pubmed

A novel LBP-1-mediated restriction of HIV-1 transcription at the level of elongation in vitro.

TAF1 TAF2 TAF6

4.66e-051615537836461
Pubmed

Novel mechanism and factor for regulation by HIV-1 Tat.

TAF1 TAF2 TAF6

4.66e-051615537835343
Pubmed

Direct interaction of human TFIID with the HIV-1 transactivator tat.

TAF1 TAF2 TAF6

4.66e-051615538121496
Pubmed

Defining the human deubiquitinating enzyme interaction landscape.

USP18 POLR1A COPA COPG1 CAMK2G PSMC2 MRPS35 POLA2 KLHL20 LRPPRC CTPS2 SNX27 CPNE1 NEURL4 BTRC

4.67e-0510051551519615732
Pubmed

Large-scale identification of c-MYC-associated proteins using a combined TAP/MudPIT approach.

COPG1 MYO9B PSMA3 PSMC2 COPG2 LRPPRC TOP2A

4.77e-05211155717314511
Pubmed

C9orf72 protein quality control by UBR5-mediated heterotypic ubiquitin chains.

POLR1A COPA COPG1 CAMK2G PSMA3 PSMC2 EXOSC2 EIF3CL ORC5 LRPPRC UBA1 CTPS2 MDN1 TCERG1 RAB39A WDR41 RPA1

4.90e-0512571551737317656
Pubmed

Neuron-specific protein network mapping of autism risk genes identifies shared biological mechanisms and disease-relevant pathologies.

GAD1 SYNRG COPG1 CAMK2A CAMK2G PSMC2 POR MRPS35 ARHGAP35 EIF3CL LRPPRC UBA1 GLG1 MACF1 CAPRIN1 BTRC

5.31e-0511391551636417873
Pubmed

TAF4, a subunit of transcription factor II D, directs promoter occupancy of nuclear receptor HNF4A during post-natal hepatocyte differentiation.

SOX9 TAF1 TAF6 TAF1L

5.35e-0546155425209997
Pubmed

Placental Remote Control of Fetal Metabolism: Trophoblast mTOR Signaling Regulates Liver IGFBP-1 Phosphorylation and IGF-1 Bioavailability.

IGFBP1 MTOR

5.90e-053155237108437
Pubmed

Profiling cancer gene mutations in longitudinal epithelial ovarian cancer biopsies by targeted next-generation sequencing: a retrospective study.

ATR TOP2A

5.90e-053155225846551
Pubmed

CaMKII-δ9 promotes cardiomyopathy through disrupting UBE2T-dependent DNA repair.

CAMK2A CAMK2G

5.90e-053155231481791
Pubmed

SOX9 promotes nasopharyngeal carcinoma cell proliferation, migration and invasion through BMP2 and mTOR signaling.

SOX9 MTOR

5.90e-053155231357026
Pubmed

Nonsyndromic bilateral and unilateral optic nerve aplasia: first familial occurrence and potential implication of CYP26A1 and CYP26C1 genes.

CYP26A1 CYP26C1

5.90e-053155221850183
Pubmed

CaMKIIdelta isoforms differentially affect calcium handling but similarly regulate HDAC/MEF2 transcriptional responses.

HDAC4 CAMK2A

5.90e-053155217923476
Pubmed

mTrs130 is a component of a mammalian TRAPPII complex, a Rab1 GEF that binds to COPI-coated vesicles.

COPG1 TRAPPC9

5.90e-053155219656848
Pubmed

Fluconazole alters CYP26 gene expression in mouse embryos.

CYP26A1 CYP26C1

5.90e-053155219429397
Pubmed

Deubiquitinase USP18 regulates reactive astrogliosis by stabilizing SOX9.

SOX9 USP18

5.90e-053155233694203
Pubmed

Transient expression of SOX9 protein during follicular development in the adult mouse ovary.

SOX9 POR

5.90e-053155216488195
Pubmed

Evidence for a functional genetic polymorphism of the human retinoic acid-metabolizing enzyme CYP26A1, an enzyme that may be involved in spina bifida.

CYP26A1 CYP26C1

5.90e-053155216933217
InteractionHERC2 interactions

HDAC4 COPA COPG1 MYO9B PSMC2 COPG2 BICD1 PIAS4 SUV39H1 MACF1 TAF1 TAF2 RPA1 TAF1L NEURL4

4.63e-0650314815int:HERC2
InteractionYWHAH interactions

SYNRG HDAC4 ERCC6L CAMK2G PSMC2 POLA2 IFIH1 KSR1 ZNF106 UBA1 C2CD3 TCERG1 SYNJ2 MTOR SYDE2 SVIL MACF1 RPA1 TRAPPC9 EDRF1 ARHGEF6 VCL

1.82e-05110214822int:YWHAH
InteractionGSK3B interactions

SOX9 UBR1 SYNRG HDAC4 COPG1 PRSS37 PSMC2 ARHGAP35 BICD1 TTLL12 UBA1 MTOR FAM83D MACF1 RPA1 CAPRIN1 BTRC TOP2A VCL

2.06e-0586814819int:GSK3B
InteractionBCL2L1 interactions

UBR1 CASP8AP2 USP18 HDAC4 GNLY KLHL20 MTOR SVIL EDRF1

2.86e-052131489int:BCL2L1
InteractionNR3C1 interactions

UBR1 CASP8AP2 FAT4 WDR64 ARID4B ERCC6L CAMK2G POR MRPS35 NBN STK31 LRPPRC MDN1 TMTC3 SVIL UNC5C MIB1 TAF2 POTEJ RPA1

3.06e-0597414820int:NR3C1
InteractionPPP5C interactions

GAD1 ATR CAMK2A CAMK2G PSMC2 UBA1 FAM83F CPNE1 RPA1 VCL

3.38e-0527214810int:PPP5C
InteractionSCYL1 interactions

COPA COPG1 AGPAT3 COPG2 POLA2 MACF1 TAF6 RPA1

3.61e-051691488int:SCYL1
InteractionYWHAG interactions

SYNRG HDAC4 ERCC6L CAMK2G TTLL12 KSR1 ZNF106 UBA1 C2CD3 MDN1 TCERG1 SYNJ2 MTOR SYDE2 SVIL SNX27 MACF1 RPA1 BTRC TRAPPC9 EDRF1 ARHGEF6 VCL

4.04e-05124814823int:YWHAG
GeneFamilyWD repeat domain containing|F-box and WD repeat domain containing

FBXW10B FBXW10 BTRC

3.21e-05111073559
GeneFamilyCytochrome P450 family 26

CYP26A1 CYP26C1

1.04e-04310721013
GeneFamilyWD repeat domain containing

FBXW10B FBXW10 WDR64 COPA CFAP43 WDR41 BTRC

9.43e-042621077362
CoexpressionDACOSTA_UV_RESPONSE_VIA_ERCC3_DN

SOX9 NRG1 SPRED2 HDAC4 ATR MYO9B MARCHF6 NBN ARHGAP35 KLHL20 BICD1 ORC5 NBAS LRPPRC C2CD3 PTPRA MDN1 SYNJ2 MACF1 BTRC TOP2A VCL

6.52e-0985615422M4500
CoexpressionPEREZ_TP53_TARGETS

TRPM6 USP18 GAD1 KLHL28 POLR1A METRNL VPS13C CAMK2G AGPAT3 NRG2 B3GNT7 KLHL20 HHATL IFIH1 KSR1 EDAR FAM83F UMODL1 INTS15 FAM83D CHST2 ARHGEF6

2.19e-06120115422M4391
CoexpressionWAKABAYASHI_ADIPOGENESIS_PPARG_BOUND_8D

PIAS4 C2CD3 CTPS2 IGFBP1 FBH1 FAM83F PRELID2 MTOR SUV39H1 MIB1 WDR41 CAPRIN1 PLXNA1 TOP2A ARHGEF6

6.68e-0664615415M2419
CoexpressionZHANG_BREAST_CANCER_PROGENITORS_UP

CASP8AP2 ATR MARCHF6 COL25A1 ORC5 EDAR SYDE2 ADAMTS20 TAF2 RPA1 CAPRIN1 TOP2A

1.05e-0543415412M15150
CoexpressionWAKABAYASHI_ADIPOGENESIS_PPARG_BOUND_8D

PIAS4 C2CD3 CTPS2 IGFBP1 FBH1 FAM83F PRELID2 MTOR SUV39H1 MIB1 WDR41 CAPRIN1 PLXNA1 TOP2A ARHGEF6

1.12e-0567515415MM1073
CoexpressionZHANG_BREAST_CANCER_PROGENITORS_UP

CASP8AP2 ATR MARCHF6 COL25A1 ORC5 EDAR SYDE2 ADAMTS20 TAF2 RPA1 CAPRIN1 TOP2A

1.44e-0544815412MM1044
CoexpressionGSE22935_24H_VS_48H_MBOVIS_BCG_STIM_MYD88_KO_MACROPHAGE_UP

DOCK2 SPRED2 INSRR NBN PTPRT IFIH1 PTPRA BTRC

2.43e-051991548M7756
CoexpressionGSE3203_UNTREATED_VS_IFNB_TREATED_LN_BCELL_DN

GAD1 CAMK2A CFAP43 KSR1 PRELID2 SVIL KBTBD12 PLXNA1

2.52e-052001548M6789
CoexpressionBARIS_THYROID_CANCER_DN

UBA1 GLG1 FGFR4 PKN3 VCL

2.54e-05591545M15411
CoexpressionKAUFFMANN_DNA_REPAIR_GENES

ATR NBN POLA2 FANCB UBA1 MTOR RPA1 TOP2A

6.77e-052301548M11563
CoexpressionAtlasdev gonad_e13.5_F_MeioticGermCell_Oct_k-means-cluster#2_top-relative-expression-ranked_1000

CASP8AP2 ATR COPG2 FANCB LRPPRC MDN1 MTOR SUV39H1 SNX27 TAF1 TAF6 EDRF1

1.02e-0536115012gudmap_dev gonad_e13.5_F_MeioticGermCell_Oct_k2_1000
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_ciliated-Deuterosomal|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MAT1A CFAP43 SLC9C2 UMODL1 TEKT1 CFAP61 TOP2A CFAP99

4.60e-071981548f31790442ef142f1c0c49bf3daf2d0efb193d2c9
ToppCellTCGA-Stomach-Primary_Tumor-Stomach_Adenocarcinoma-Stomach_Adenocarcinoma_-_Tubular|TCGA-Stomach / Sample_Type by Project: Shred V9

SOX9 FBXW10B ATR ERCC6L STK31 LRPPRC TOP2A

5.34e-07138154793497c0a5d5e54006653b2dedc7a7041e1a613e6
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D062|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

MAT1A NRG2 CFAP43 SLC9C2 PTPRT TEKT1 CFAP61

2.93e-061781547de5d50d7ca9ee9eb62f50c88a0c6d47f0694b2e6
ToppCellLPS_only-Myeloid-Monocytes,_Macrophages-Monocytes-Macrophages|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 METRNL FPR3 C1QC RAB39A

3.04e-061791547dc03b9045510eb1bb934329646bb92dd06890ce9
ToppCellLPS_only-Myeloid-Monocytes,_Macrophages|LPS_only / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 METRNL FPR3 C1QC RAB39A

3.04e-061791547330c1326ba93bb8f32559ee1cc40e357cc44ad8d
ToppCellChildren_(3_yrs)-Epithelial-ciliated_cell-D032|Children_(3_yrs) / Lineage, Cell type, age group and donor

CFAP43 EFHB SLC9C2 PTPRT TEKT1 CFAP61 CFAP99

4.36e-06189154768a3cf7763d6f9b95d6d6524eff7a16042703f1d
ToppCellAdult-Immune-interstitial_macrophage_(C1Q_positive)|Adult / Lineage, Cell type, age group and donor

DOCK2 PIK3AP1 MYO9B METRNL FPR3 C1QC RAB39A

5.00e-06193154731c0978ba78c9516d498aec0798902e57555e557
ToppCellPCW_13-14-Mesenchymal-Mesenchymal_fibroblastic-mes_immature5_(6)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

FAT4 EDAR UNC5C MACF1 FGFR4 CHST2 TMEM178B

5.17e-061941547b1bb0f846d2865efdd9bc8842b16b9d069785882
ToppCellfacs-Bladder-nan-3m|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COPA COPG1 UBA1 PTPRA GLG1 MACF1 CAPRIN1

5.53e-06196154744f5b1b474399c9316729155f2ea95a82ca66e30
ToppCellfacs-Bladder-nan-3m-Epithelial|Bladder / Skin_Bladder_Kidney_Mammary_Gland - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COPA COPG1 UBA1 PTPRA GLG1 MACF1 CAPRIN1

5.53e-061961547c0e90d964baa2eb4fbd18a52379ccec5d3bf59a8
ToppCellControl-NK|Control / Disease condition and Cell class

PIK3AP1 METRNL GNLY B3GNT7 ADAM8 MACF1 CHST2

6.11e-061991547f3316fb97c6065286ffd22a0ad9fe7aa5b3b5650
ToppCellParenchymal-NucSeq-Epithelial-Epi_airway_ciliated-Ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CFAP43 EFHB SLC9C2 PTPRT TEKT1 CFAP61 CFAP99

6.31e-062001547926a7ea94b5908aebf103893ea83ce9d25285b65
ToppCellParenchymal-NucSeq-Epithelial-Epi_airway_ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

CFAP43 EFHB SLC9C2 PTPRT TEKT1 CFAP61 CFAP99

6.31e-06200154706ce6e03498ba38ef6a06eaf2731e3b2eeda59eb
ToppCelldroplet-Liver-HEPATOCYTES-1m-Myeloid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CASP8AP2 FAM83F UMODL1 PRELID2 TTL RINL

1.61e-05154154666c93733116e31b65dfb4b0b00de5c39d19cdb84
ToppCellLPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 EFHB SLC9C2 CFAP61 CFAP99

1.67e-0515515465f1e2195a6b831e1b636f5cc3a282ca423721822
ToppCellLPS-IL1RA+antiTNF-Epithelial_airway-Ciliated_cells-Ciliated|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 EFHB SLC9C2 CFAP61 CFAP99

1.67e-0515515460944429459f642a1bcc56edc1ec28aaecde3e2dc
ToppCellFLU-Healthy-1|Healthy / Virus stimulation, Condition and Cluster

USP18 GNLY IFIH1 CPNE1 DDX60L PLXNA1

1.93e-05159154697c8e16a7ac10ebba96daee97f9fb1d4a404f23b
ToppCellprimary_visual_cortex-Neuronal-GABAergic_neuron-Lamp5-Lamp5_Lsp1|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

GAD1 SYDE2 UNC5C FAM83D CHST7 ARHGEF6

1.93e-0515915460dccc4275b9b4f8554dd556da7218e130bff8fd1
ToppCellFLU-Healthy-1|FLU / Virus stimulation, Condition and Cluster

USP18 GNLY IFIH1 CPNE1 DDX60L PLXNA1

1.93e-051591546fe2a9f79b058e89214256e736f6e266830cdfa28
ToppCelldroplet-Liver-LIVER-NPC-1m-Lymphocytic-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

DOCK2 ATR ATP8A2 NCBP3 PIAS4 PRELID2

2.38e-0516515468c7a6f9e2ca0ce077426d3d0726e3f5a4c03b296
ToppCellfacs-Heart-LV-3m-Lymphocytic-B_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NRG1 FBXW10 FANCB GIMAP8 RPUSD2 TEKT1

2.91e-051711546c6fc9ef9735dbf5314a4c7dac2b2954b0985ae4d
ToppCellfacs-Heart-LV-3m-Lymphocytic-B_cell|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

NRG1 FBXW10 FANCB GIMAP8 RPUSD2 TEKT1

2.91e-05171154655b194a9bf4d3e4b5d96e0d1298424359c441cbb
ToppCellPCW_13-14-Epithelial-Epithelial_ciliated|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

MAT1A EFHB PTPRT TEKT1 CFAP61 CFAP99

3.31e-051751546b1369d2b74f461e6822d0c33e9b50fe0dfbceb54
ToppCellPCW_13-14-Epithelial-Epithelial_ciliated-epi_ciliated_(14)|PCW_13-14 / Celltypes from embryonic and fetal-stage human lung

MAT1A EFHB PTPRT TEKT1 CFAP61 CFAP99

3.31e-051751546c82ec6deb6ccdd991a69a62b6d62d5b14c803d7a
ToppCellLPS-IL1RA+antiTNF-Myeloid-Monocytes,_Macrophages|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 FPR3 C1QC RAB39A

3.53e-051771546cdad5a2f672a7f07c05669bfcaf1ec74defd3de7
ToppCellLPS-IL1RA+antiTNF-Myeloid-Monocytes,_Macrophages-Monocytes-Macrophages|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 FPR3 C1QC RAB39A

3.53e-051771546991ae76bb615392d84aeb89886148fa42c1c649c
ToppCell3'-Pediatric_IBD-SmallIntestine-Epithelial-Tuft-related-Tuft|Pediatric_IBD / Celltypes from developing, pediatric, Crohn's, & adult GI tract

SOX9 CARMIL3 NRG2 PTPRT FGFR4 CFAP61

3.65e-051781546f17c3b7bb562ac24c6a03fe3c9ba94c2b434c141
ToppCellLPS-IL1RA-Myeloid-Monocytes,_Macrophages-Monocytes-Macrophages|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 METRNL FPR3 RAB39A

3.88e-05180154697241f62ee133dcb0d4855ffda5dd1349de9f7b2
ToppCellLPS-IL1RA-Myeloid-Monocytes,_Macrophages|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 METRNL FPR3 RAB39A

3.88e-05180154641896546cd1cc458e08c0d4e19aa4860e5d4fcd6
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

CFAP43 SLC9C2 PTPRT TEKT1 CFAP61 CFAP99

4.00e-051811546dfce05bd472f67e6e2bb60ebd6fd34f0a9aeeca6
ToppCellE18.5-samps-Mesenchymal-Matrix_fibroblast|E18.5-samps / Age Group, Lineage, Cell class and subclass

FAT4 COL25A1 UNC5C MACF1 FGFR4 CHST2

4.13e-051821546ceb37c214662a48efb56ab0d015977c6fab478b0
ToppCellAdult-Epithelial-ciliated_cell-D122|Adult / Lineage, Cell type, age group and donor

MAT1A CFAP43 SLC9C2 PTPRT TEKT1 CFAP61

4.13e-0518215467ded554a4b441e6496db673ba206c0d76ccad7d9
ToppCellLPS-antiTNF-Myeloid-Monocytes,_Macrophages|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 METRNL FPR3 RAB39A

4.13e-051821546d5d6bc16458bc665e7ad6669040d79f73f640044
ToppCellLPS-antiTNF-Myeloid-Monocytes,_Macrophages-Monocytes-Macrophages|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

DOCK2 PIK3AP1 NRG1 METRNL FPR3 RAB39A

4.13e-0518215460b59ead4bb4486c7ec2ee90b94ee3a09905612c5
ToppCellCOVID-19_Mild-gd_T|COVID-19_Mild / Disease condition and Cell class

PIK3AP1 METRNL CARMIL3 GNLY MACF1 VCL

4.25e-051831546f593a89b0aa8fffdfa403769916facfd30358521
ToppCellPBMC_fresh-frozen-Severe-critical_convalescent_d14-21-Lymphocytic-Lymphocytic_T-CD8-positive,_alpha-beta_T_cell-T_CD8_c11-MKI67-FOS|Severe-critical_convalescent_d14-21 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PSMC2 FAM83D CHST7 PLXNA1 TOP2A ARHGEF6

4.39e-0518415467f8488dbb1ee41372cdbcd34a2e14b377218bf0f
ToppCellsaliva-Severe-critical_progression_d28-40-Myeloid-Macrophage-macrophage,_alveolar-Macro_c2-CCL3L1|Severe-critical_progression_d28-40 / Compartment, severity and other cell annotations on 10x 3' data (130k)

PIK3AP1 USP18 NBN IFIH1 DDX60L PKN3

4.52e-051851546f30fb9d75cdb757b206312992aaf7485bc900f96
ToppCellAdult-Epithelial-ciliated_cell-D175|Adult / Lineage, Cell type, age group and donor

CFAP43 SLC9C2 PTPRT TEKT1 CFAP61 CFAP99

4.52e-05185154630f4980dee6cd5959655f8d74049f3bfb5312611
ToppCellCOVID-19_Convalescent-PLT_4|World / Disease Group and Platelet Clusters

KLHL28 ARID4B EXOSC2 BICD1 ORC5 CHST7

4.66e-0518615465954a1e3ffafb33f2a9bc87af3343f304fda4c92
ToppCellTCGA-Pancreas-Primary_Tumor-Pancreatic_Adenocarcinoma-Ductal_Adenocarcinoma-1|TCGA-Pancreas / Sample_Type by Project: Shred V9

UBR1 CASP8AP2 ARID4B KLHL20 EDAR TAF1

4.66e-05186154603db813598b67b1e08f759758a1c2023396921fa
ToppCellFetal_29-31_weeks-Epithelial-ciliated_cell|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

CFAP43 SLC9C2 PTPRT TEKT1 CFAP61 CFAP99

4.80e-0518715469e10ed56090d82589bc457788282f664b70ace4b
ToppCellEpithelial-ciliated_cell|World / Lineage, Cell type, age group and donor

CFAP43 SLC9C2 PTPRT TEKT1 CFAP61 CFAP99

4.94e-05188154661a459f3fe57e5728efc72637ff2edc2d343492b
ToppCellAdult-Epithelial-ciliated_cell-D231|Adult / Lineage, Cell type, age group and donor

CFAP43 EFHB SLC9C2 PTPRT TEKT1 CFAP61

4.94e-05188154634b11f72ca73153d02edcd09b38983ad1a504659
ToppCellChildren_(3_yrs)-Epithelial-ciliated_cell|Children_(3_yrs) / Lineage, Cell type, age group and donor

CFAP43 EFHB SLC9C2 PTPRT TEKT1 CFAP61

4.94e-0518815462b6dfc88be9ded7b88da9fe78a9cd9f9b3af8af3
ToppCellPND07-28-samps-Mesenchymal-Matrix_fibroblast|PND07-28-samps / Age Group, Lineage, Cell class and subclass

COL25A1 UNC5C MACF1 FGFR4 CHST2 VCL

5.09e-051891546dc5164591dea45b420798b94dda211be03daa70c
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Macrophage_Dendritic-M2_Macrophage|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK2 PIK3AP1 MYO9B FPR3 C1QC RAB39A

5.24e-051901546788ff9d8888d2dd25b7e1d7e0e5d57751ce86f19
ToppCellfacs-GAT-Fat-3m|GAT / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COPA UBA1 SVIL CPNE1 CAPRIN1 VCL

5.24e-0519015461d92be1b41cff59e834a9d28868f554bd1f3e471
ToppCellrenal_medulla_nuclei-Hypertensive_with+without-CKD-Immune-Myeloid-Macrophage_Dendritic|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK2 PIK3AP1 MYO9B FPR3 C1QC RAB39A

5.40e-051911546baa70781633a3fe5bf987f9d8dff3884f5167e7f
ToppCellCD8+_Memory_T_cell-CV-7|CD8+_Memory_T_cell / cell class, Virus stimulation and cluster

UBR1 VPS13C NBAS GLG1 MACF1 EDRF1

5.40e-0519115469454f642c3621370fa23640b631301346b300950
ToppCellAnterior_Cingulate_gyrus_(CgG)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1-4_LAMP5_DUSP4_(Lamp5_Rosehip)|Anterior_Cingulate_gyrus_(CgG) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

GAD1 NRG1 PTPRT PRELID2 ADAMTS20 PLXNA1

5.55e-05192154663d1b3efe93e5ff939278ebe40bacb38218ea09b
ToppCellSomatosensory_Cortex_(S1)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1-4_LAMP5_DUSP4_(Lamp5_Rosehip)|Somatosensory_Cortex_(S1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

GAD1 COL25A1 PTPRT PRELID2 ADAMTS20 PLXNA1

5.55e-051921546342842378c20267c5044bdd622515e8b9f895623
ToppCellPrimary_Motor_Cortex_(M1)-Neuronal-Inh_GABAergic-i_Gaba_1-GABA_L1_LAMP5-Inh_L1-4_LAMP5_DUSP4_(Lamp5_Rosehip)|Primary_Motor_Cortex_(M1) / Sample groups (6 Anatomical region groups), with 5 level hierarchy of cell types

GAD1 COL25A1 PTPRT PRELID2 ADAMTS20 PLXNA1

5.55e-051921546bd3fa6c8fcb618db64d11f25cabaf08608957c35
ToppCellFetal_29-31_weeks-Immune-alveolar_macrophage_(MARCO_positive)-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

DOCK2 PIK3AP1 MYO9B METRNL FPR3 ADAM8

5.88e-0519415463043f6230fa723037c8cf7123f611ae847b39fd4
ToppCellILEUM-non-inflamed-(6)_ILC1|non-inflamed / shred on tissue, inflammation_status, cell class(v3), cell subclass (v2)

PIK3AP1 METRNL GNLY B3GNT7 ADAM8 PTP4A1

5.88e-051941546396f9a6b370721d425cbe335dbeea5f9514c92dc
ToppCellSmart-start-Cell-Wel_seq-Non-neoplastic-Myeloid-TAM-BDM-TAM-BDM_hypoxia/MES-E|Smart-start-Cell-Wel_seq / Platform, Oncotype, Lineage, Cell_class, celltype (level4), mutation group

DOCK2 PIK3AP1 MYO9B METRNL ADAM8 ZNF106

6.05e-051951546d53585715c7f5827c4f5a6db11cb31857ee9d4f0
ToppCellImmune-alveolar_macrophage_(MARCO_positive)|World / Lineage, Cell type, age group and donor

DOCK2 PIK3AP1 MYO9B FPR3 C1QC DDX60L

6.05e-051951546f92114ef995e690a3bedc62c89c5fd6773d0d9f7
ToppCellPCW_10-12-Mesenchymal-Mesenchymal_fibroblastic-mes_immature5_(6)|PCW_10-12 / Celltypes from embryonic and fetal-stage human lung

FAT4 EDAR UNC5C MACF1 CHST2 TMEM178B

6.05e-0519515460e55fa5b3cbeb7baee3d4ac272a3bf80381ec937
ToppCellControl_saline-Epithelial_airway-airway_epithelial-Ciliated|Control_saline / Treatment groups by lineage, cell group, cell type

MAT1A EFHB UMODL1 TEKT1 CFAP61 CFAP99

6.05e-05195154660067b5359174f0d1a8b5748bfc0690762e9e740
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Immune-Myeloid-Macrophage_Dendritic|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK2 PIK3AP1 MYO9B FPR3 C1QC RAB39A

6.05e-05195154634a9462f4e843f3065cc58c17ad71c1b5b836ae1
ToppCellfrontal_cortex-Neuronal-GABAergic_neuron-Lamp5-Lamp5_Lhx6|frontal_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

GAD1 COL25A1 UNC5C CHST7 ARHGEF6

6.11e-051201545a4e3f9a83bc52ccc75bcd64b1be4e2c5441f6d1a
ToppCellT_cells-CD56_dim_CD16+_NK_cells|T_cells / Immune cells in Kidney/Urine in Lupus Nephritis

PIK3AP1 METRNL GNLY ADAM8 CHST2 VCL

6.23e-05196154607b557b8530c19ca5b31ad2eac00c36ef1939266
ToppCellParenchymal-10x3prime_v2-Epithelial-Epi_airway_ciliated-Deuterosomal|10x3prime_v2 / Cell types per location group and 10X technology with lineage, and cell group designations

FBXW10B FBXW10 ERCC6L TEKT1 TOP2A CFAP99

6.40e-051971546861e8df9bd74dc5e17bafdc1fb3fef546753c73a
ToppCellCOVID-19|World / Condition, Lineage and Cell class

USP18 GNLY ADAM8 IFIH1 GIMAP8 MACF1

6.40e-051971546228f641d79282cc3dc51b95a1f4b0cccfc200735
ToppCellCOVID-19_Mild|World / Disease group, lineage and cell class

USP18 ARID4B METRNL VPS13C IFIH1 DDX60L

6.40e-0519715465c33454b10023decd2f5ccda9229b6512659711e
ToppCellsevere-Lymphocytic-NK_cells|Lymphocytic / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

PIK3AP1 METRNL GNLY B3GNT7 ADAM8 CHST2

6.59e-0519815466ef22f33b43e9adceea11738e3cba0e8b59b4ec6
ToppCellCOVID-19_Severe-NK|COVID-19_Severe / Disease condition and Cell class

PIK3AP1 METRNL GNLY B3GNT7 ADAM8 CHST2

6.59e-051981546742c4d6016cfa48444a5919a885ab8d02cad7e18
ToppCellTCGA-Skin-Metastatic-Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

DOCK2 PIK3AP1 ARID4B VPS13C GIMAP8 RAB39A

6.59e-051981546af4fb9eb2295c7b90624b38ba25619aa15254efa
ToppCellrenal_cortex_nuclei-Renal_AKI_(acute_kidney_injury)-Immune-Myeloid|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

DOCK2 PIK3AP1 MYO9B FPR3 C1QC RAB39A

6.59e-05198154696883ad8e189a46ed5b7eaafc0543e53682d26ed
ToppCellmild-Lymphocytic-NK_cells|Lymphocytic / Cohort 2 (Rhapsody WB + PBMC) with disease condition, lineage and cell classs

PIK3AP1 METRNL GNLY B3GNT7 ADAM8 CHST2

6.59e-0519815461d20fc9948965de52a98f758035edfdd12cafc5f
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class (2021.03.09)

USP18 ARID4B METRNL VPS13C IFIH1 DDX60L

6.59e-05198154644417089b62056269cac38d3134ff209c05b7007
ToppCellTCGA-Skin-Metastatic|TCGA-Skin / Sample_Type by Project: Shred V9

DOCK2 PIK3AP1 ARID4B VPS13C GIMAP8 RAB39A

6.59e-051981546ad39cce004867f083f8da1954e0cf5a263815184
ToppCell390C-Lymphocytic-NK_cells|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

PIK3AP1 METRNL GNLY B3GNT7 ADAM8 CHST2

6.59e-051981546623e5ada1a54cd42c32a1519b84dbe782384ee0c
ToppCellTracheal-NucSeq-Immune_Myeloid-Monocytic-Monocyte_CD16|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DOCK2 PIK3AP1 FPR3 GIMAP8 C1QC RAB39A

6.59e-0519815460b928a829844f49f4d47e88908af192cb919011f
ToppCellTCGA-Skin-Metastatic-Melanoma-Skin_Cutaneous_Melanoma|TCGA-Skin / Sample_Type by Project: Shred V9

DOCK2 PIK3AP1 ARID4B VPS13C GIMAP8 RAB39A

6.59e-05198154662cbf4b29e8af4983fb47a17f96da62682a5137e
ToppCellPBMC-Mild|PBMC / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

USP18 ARID4B METRNL VPS13C IFIH1 DDX60L

6.59e-05198154628ef3fc4c17dcb765537b75917f7db78baa522db
ToppCellTracheal-NucSeq-Immune_Myeloid-Macrophage_other-Macro_CHIT1|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DOCK2 PIK3AP1 FPR3 GIMAP8 C1QC RAB39A

6.77e-0519915466ce7612ee2ae211eb0f73391e96089ad5431c537
ToppCellTracheal-NucSeq-Immune_Myeloid-Macrophage_other|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DOCK2 PIK3AP1 FPR3 GIMAP8 C1QC RAB39A

6.96e-052001546f3dc07a7cc8cf041da8fe610d21af595818cf2d8
ToppCellLPS_IL1RA_TNF-Epithelial_airway-airway_epithelial-Ciliated|LPS_IL1RA_TNF / Treatment groups by lineage, cell group, cell type

TDRD9 MAT1A EFHB SLC9C2 TEKT1 CFAP99

6.96e-05200154696701a4d57753f5ec0dd5c7550054bbcc946bc5f
ToppCellmild|World / Cohort 1 (10x PBMC) with disease condition, cell group and cell class

USP18 ARID4B VPS13C IFIH1 MACF1 DDX60L

6.96e-05200154612f1685ce8f218433068e090c9d839cd5a1910bf
ToppCellBronchial-NucSeq-Immune_Myeloid-Monocytic-Monocyte_CD14|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DOCK2 PIK3AP1 MYO9B METRNL FPR3 KSR1

6.96e-0520015465432bdf495431cd26f6e4cd585100f3652588913
ToppCellTracheal-NucSeq-Epithelial-Epi_airway_ciliated|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

MAT1A CFAP43 SLC9C2 TEKT1 CFAP61 CFAP99

6.96e-05200154673ac1cf40ddd764be1100cbfaaa29563665457d8
ToppCellBronchial-NucSeq-Immune_Myeloid-Macrophage_other|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DOCK2 PIK3AP1 MYO9B FPR3 TTL RAB39A

6.96e-05200154678d75d381cb2b9a4c9eb7c32a07b014eaee39195
ToppCellCOVID-19_Mild-NK|COVID-19_Mild / Disease condition and Cell class

PIK3AP1 METRNL GNLY B3GNT7 ADAM8 CHST2

6.96e-052001546b586b0f1127293c2f8529be16b24229359041da2
ToppCellBronchial-NucSeq-Immune_Myeloid|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

DOCK2 PIK3AP1 MYO9B FPR3 C1QC DDX60L

6.96e-0520015462f5b71e55c2de0e77fdae6667eb57f333acc6cd1
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW12-Stem_cells|GW12 / Sample Type, Dataset, Time_group, and Cell type.

SOX9 ERCC6L FANCB FAM83D TOP2A PKN3

6.96e-0520015460bba93f1271dac704dddcdea8cb0f84a7ac6f42a
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW12-Stem_cells-Neuroepithelial_cell|GW12 / Sample Type, Dataset, Time_group, and Cell type.

SOX9 ERCC6L FANCB FAM83D TOP2A PKN3

6.96e-052001546c9479452ab8c51139522383f745f02171ebbd7e2
ToppCellTCGA-Cervix-Primary_Tumor-Endocervical_Adenocarcinoma-Mucinous_Adenocarcinoma-4|TCGA-Cervix / Sample_Type by Project: Shred V9

CFAP43 SLC9C2 TEKT1 CFAP61 CFAP99

1.35e-041421545369f2e51e0283a4de70e6c7a3b95672c0838f205
ToppCellLPS-antiTNF-Epithelial_airway-Ciliated_cells-Ciliated|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 IGFBP1 CFAP61 CFAP99

1.64e-041481545d61123f0c811287843d066b932b4a9ff09c07c5b
ToppCellLPS-antiTNF-Epithelial_airway-Ciliated_cells|LPS-antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 IGFBP1 CFAP61 CFAP99

1.64e-041481545c8e93b87212f55774223caa385859c566fa1981f
ToppCellCOVID-19-kidney-Technical/muscle_(Imm)|COVID-19 / Disease (COVID-19 only), tissue and cell type

WDR64 ATP8A2 ADAM29 PTPRT ADAMTS20

1.75e-0415015450205318a870e091add66ee4305747dda9f51510d
ToppCellTracheal-NucSeq-Immune_Lymphocytic-NK-ILC-T_NK-NK_CD56bright|NucSeq / Cell types per location group and 10X technology with lineage, and cell group designations

ERCC6L GNLY ADAM8 TAF1L TOP2A

1.80e-041511545535872e231ac0ee7b4fc4d02a260752cbbf50a2b
ToppCellLPS-IL1RA-Epithelial_airway-Ciliated_cells|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 EFHB CFAP61 CFAP99

1.80e-04151154581cf939ed4df9574fbfff265e109cb9f947d7e6e
ToppCellLPS-IL1RA-Epithelial_airway-Ciliated_cells-Ciliated|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 EFHB CFAP61 CFAP99

1.80e-0415115459cbcbbc22965a9f0be8364e733d205dd64f2a533
ToppCellprimary_visual_cortex-Neuronal-GABAergic_neuron-Lamp5-Lamp5_Ntn1_Npy2r|primary_visual_cortex / Per Region, Lineage, Cell class, Cell type, Cell subtype

GAD1 FAT4 COL25A1 PTPRT CHST7

1.86e-0415215458ff5a178a8f3550d89a003c0858820aab3773386
ToppCellControl-Epithelial_airway-Ciliated_cells-Ciliated|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 EFHB CFAP61 CFAP99

1.97e-0415415454e3bc24043144143842627cacf6f90dda2228910
ToppCellControl-Epithelial_airway-Ciliated_cells|Control / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

MAT1A CFAP43 EFHB CFAP61 CFAP99

1.97e-0415415457556a4b2b062da5ae7ec2bbb66e745e7662db628
ToppCell10x5'-GI_small-bowel-Lymphocytic_T_CD4/8-lo-Tgd_CRTAM|GI_small-bowel / Manually curated celltypes from each tissue

PIK3AP1 METRNL NRG2 GNLY FAM83F

2.03e-0415515451c67f58ed79331addbc012dab0cb09a7f350aedb
ToppCelldroplet-Liver-HEPATOCYTES-1m-Myeloid-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CASP8AP2 UMODL1 PRELID2 TTL RPUSD2

2.16e-041571545b527e88382c8d21188a0f222b3302523e8816dfc
ToppCell367C-Lymphocytic-NK_cells-NK_cell_B|Lymphocytic / Donor, Lineage, Cell class and subclass (all cells)

METRNL GNLY UMODL1 CHST2 VCL

2.22e-0415815451bf692f1e85f677cd62805437b7a59cfaf3b0449
ToppCell356C-Fibroblasts-Fibroblast-D-|Fibroblasts / Donor, Lineage, Cell class and subclass (all cells)

DOCK2 SWT1 EIF3CL GIMAP8 SLC25A15

2.29e-041591545299e2162a82e31196d7f3a110c2db622349edfff
DiseaseAdenocarcinoma of lung (disorder)

TRPM6 ATR INSRR ARHGAP35 TTF1 FGFR4 TAF1L TOP2A

1.01e-052061488C0152013
DiseaseIntellectual Disability

SOX9 HDAC4 CAMK2A ATP8A2 MTOR ALG14 SNX27 MACF1 TAF1 TAF2 TAF6

1.70e-0544714811C3714756
Diseasemonocyte percentage of leukocytes

PIK3AP1 POLR1A ARID4B METRNL CYP26A1 B3GNT7 NCBP3 IFIH1 KSR1 GLG1 SLC22A3 NEURL4

3.32e-0473114812EFO_0007989
DiseaseAicardi-Goutieres Syndrome 2

USP18 IFIH1

3.70e-0461482C3489724
DiseaseLissencephaly

TMTC3 MACF1

3.70e-0461482C0266463
DiseaseAICARDI-GOUTIERES SYNDROME 1

USP18 IFIH1

3.70e-0461482C0796126
DiseasePseudo-TORCH syndrome

USP18 IFIH1

5.16e-0471482C3489725
DiseaseLarge cell carcinoma of lung

TRPM6 ATR MTOR

5.51e-04321483C0345958
Diseaseamino acid measurement

FAT4 SPRED2 HDAC4 CAMK2G ORC5 NBAS GUCY2C FBXO31 CYP26C1 TTL TEKT1

6.48e-0467814811EFO_0005134
DiseaseAICARDI-GOUTIERES SYNDROME

USP18 IFIH1

6.86e-0481482C0393591
DiseaseAutoinflammatory disorder

USP18 COPA IFIH1

7.19e-04351483C3860213
Diseaseorthostatic hypotension

PIK3AP1 GUCY2C

8.79e-0491482EFO_0005252
DiseaseAdenoid Cystic Carcinoma

ARID4B INSRR FGFR4 TOP2A

1.64e-031001484C0010606
Diseasepallidum volume change measurement

EFHB TRAPPC9

1.88e-03131482EFO_0021494
Diseaseepisodic memory

TRPM6 METRNL NBAS

2.28e-03521483EFO_0004333
Diseasemean reticulocyte volume

POLR1A SPRED2 ATR MYO9B PTPRA TMTC3 MTOR SLC22A3 CPNE1 RPA1 TRAPPC9

2.39e-0379914811EFO_0010701
Diseasegranulysin measurement

GNLY CPNE1

2.51e-03151482EFO_0008144
Diseasehead and neck squamous cell carcinoma (is_implicated_in)

FANCB FGFR4

2.51e-03151482DOID:5520 (is_implicated_in)
DiseaseRhabdomyosarcoma

NBN FGFR4

2.51e-03151482C0035412
DiseaseMetastatic melanoma

GUCY2C MTOR TAF1

2.54e-03541483C0278883
DiseaseIGF-1 measurement

VPS13C CYP26A1 LRPPRC SLC22A3 CYP26C1 DDX60L CFAP61 TOP2A

3.32e-034881488EFO_0004627
Diseaseuric acid measurement

GAD1 NRG1 FAT4 POLR1A SWT1 INSRR POLA2 SLC22A3 RPA1

3.76e-036101489EFO_0004761
Diseasevital capacity

NRG1 SPRED2 METRNL CAMK2G B3GNT7 INO80 STK31 ZNF106 EDAR WDR41 FGFR4 TMEM178B PLXNA1 ARHGEF6

3.81e-03123614814EFO_0004312
Diseaseemphysema pattern measurement

SVIL TRAPPC9

4.04e-03191482EFO_0005850
Diseasetestosterone measurement

TRPM6 UBR1 POLR1A ERCC6L MYO9B METRNL POR COL25A1 PTP4A1 SLC22A3 CYP26C1 MACF1 ARHGEF6 PKN3

5.00e-03127514814EFO_0004908

Protein segments in the cluster

PeptideGeneStartEntry
LLGDIAKRVYEVISV

UMODL1

246

Q5DID0
ESCLSIVREKLYKGI

TTF1

706

Q15361
LIVVDDVRKSVHLYC

ADAM29

256

Q9UKF5
ELLGKVVCVDYISLD

ARID4B

171

Q4LE39
IAKCGILCIRDVYTL

CFAP43

656

Q8NDM7
VGCCKEILRTVYKAV

CFAP61

116

Q8NHU2
VCKGDIIYVTRVEEG

ARHGEF6

181

Q15052
NGLEILECKYRVAVT

BICD1

411

Q96G01
LECKYRVAVTEVIDL

BICD1

416

Q96G01
VDSDKVIIITCDRGY

CXorf66

336

Q5JRM2
LRVISACADGKIRIY

FBXW10

626

Q5XX13
VLCLQYDERVIITGS

BTRC

346

Q9Y297
YIVSVRCEEKTVGRL

FAT4

1666

Q6V0I7
LYVIVECAAKGNLRE

FGFR4

546

P22455
KVIIVYVESICRVET

ALG14

166

Q96F25
AVVLVTLAGIIVYRK

ADAM8

666

P78325
ETTVYVIVRCKLDDR

PIK3AP1

191

Q6ZUJ8
LKIYSGDLVVCETVI

PIK3AP1

246

Q6ZUJ8
VANRPLKCIVEETYI

CASP8AP2

1781

Q9UKL3
CGTTYKVLKEIVERV

CAPRIN1

226

Q14444
TYVVVTVCLKAGLET

ATP8A2

1006

Q9NTI2
RDVYCRLKGVGQVVE

ADAMTS20

1496

P59510
LTRDIYELIKKGEIC

RAB39A

171

Q14964
ILKRTECQFLYEVRG

GUCY2C

971

P25092
VYRLICKGTIEERIL

INO80

1221

Q9ULG1
PVVYCVRLAKALVDD

INTS15

141

Q96N11
EELYQKRVLTITGIC

NRG1

236

Q02297
LVVKDRTISFLGCVV

OR5D18

86

Q8NGL1
LRVISACADGKIRIY

FBXW10B

626

O95170
FVLEVLSGCLEYRKL

CFAP99

46

D6REC4
LSGCLEYRKLLTVVV

CFAP99

51

D6REC4
ELALRSYVLVESVCK

MDN1

296

Q9NU22
ARLAVGCVVELVFKV

HDAC4

771

P56524
TYCGVQLVKERERTL

HHATL

476

Q9HCP6
VVTVDAKIYERCELA

SPACA5

16

Q96QH8
ICAVVVEYETKAGRI

POR

471

P16435
CRLVLSYVLEGLKSV

EDRF1

601

Q3B7T1
VVCREYELERPKSVI

KIAA1109

946

Q2LD37
RKKILDVYANVCGVV

EDAR

326

Q9UNE0
IITVCYGIIAAKIHR

FPR3

216

P25089
YCKDLRLGSEVLEQV

CARMIL3

221

Q8ND23
KVLRESDVGVVVYVA

DDX60L

781

Q5H9U9
EQILVDCRDTLKYGV

GAD1

166

Q99259
LRKLEITGVSCRDVY

FBXO31

121

Q5XUX0
RVGKVLCSPVESEYI

PLXNA1

901

Q9UIW2
CRIELYRVVESLAKA

IGFBP1

176

P08833
QEIRTLEAKLVRYIC

KSR1

71

Q8IVT5
CDDIRVNVVYGLIVI

OR51E1

191

Q8TCB6
LSVVAVVSCLYLGVK

COL25A1

41

Q9BXS0
EICRKQGVAVYILLD

FAM83D

181

Q9H4H8
LYQKRVLTITGICVA

NRG2

401

O14511
ELGRDYRTCLTIVQK

GNLY

61

P22749
PKVRLETIYICGVDE

NCBP3

121

Q53F19
LGVCYIVVKVSLLVV

MARCHF6

366

O60337
VKAGLCRRVLVQVSY

MAT1A

306

Q00266
FRECLTEVIRYLGVL

HEYL

121

Q9NQ87
VSEILEKVTCERRYI

LRPPRC

321

P42704
KEVEQVYLRCAAGAV

METRNL

66

Q641Q3
RIFGEVAVATVICKD

PRSS37

186

A4D1T9
LICVKALKTRYIGEV

EXOSC2

66

Q13868
LVYEARCDVTLTLKE

NBAS

891

A2RRP1
CKIDIESGQRYLEVI

MACF1

2641

Q9UPN3
GDLVQVCYDLERIKL

MIB1

336

Q86YT6
VTNLVEVGRVKCVRY

PTPRT

986

O14522
KDRYVVCGRVFLSLE

FANCB

611

Q8NB91
LVDIIGICKSYEDAT

RPA1

316

P27694
ANLCVLLYRSGVKVV

C1QC

176

P02747
SELEGQVISCLKLRY

GLG1

961

Q92896
CAIIERVQRYLEEKG

EIF3CL

481

B5ME19
YVRNICKALLDVLGI

ATR

371

Q13535
VEIAYVGATILDVCK

FBH1

706

Q8NFZ0
ELCDVVLVVGAKKIY

KLHL20

66

Q9Y2M5
ICVLDQKVYVIGGIA

KLHL28

326

Q9NXS3
DIISIESCKEYLLGV

C2CD3

1306

Q4AC94
ERKYCVELLNSILEV

DOCK2

881

Q92608
ICREYIVGLSVETER

COPA

1056

P53621
CVFREKETLNIVLVG

GIMAP8

431

Q8ND71
LDIKECNIVIRYGLV

IFIH1

796

Q9BYX4
AALGRLRYVDCVVKE

CYP26C1

361

Q6V0L0
FEYKRAIVDCIISIV

COPG2

411

Q9UBF2
IKYRRLGEEATVLCV

INSRR

851

P14616
KVIPVGYRVATCLTE

EFHB

266

Q8N7U6
EQLKYIGCVIKETLR

CYP26A1

351

O43174
FEYKRAIVDCIISII

COPG1

411

Q9Y678
RGDVYLLVVVKSVIT

B3GNT7

131

Q8NFL0
IYTTICRIGTVIKDN

NBEAP1

76

P0C6P0
KLGRKVETITIIYDC

SEC14L2

141

O76054
CYVIVTEIVGSKQRR

SLC22A3

226

O75751
VIGEDAACIAYIRLT

CAMK2G

501

Q13555
AVVDLYGKCTQITVL

NEURL4

191

Q96JN8
IRVKICRVETEYSFL

CPNE1

261

Q99829
KENVVVYRLITCGTV

ERCC6L

576

Q2NKX8
GNVTKEVIVLYLTLC

KRBA2

221

Q6ZNG9
DVTVLVDYTVRKFCI

PTPRA

371

P18433
IESLYCEKRILEAVG

PKN3

601

Q6P5Z2
DKGQVRKCLDVVEIY

KBTBD12

506

Q3ZCT8
AVLLVRAQEIGYTVC

OR52L2P

101

Q8NGH6
VLICRIVKGYTLADE

MTOR

1211

P42345
LVVSYKVGVCRVDPR

RPUSD2

326

Q8IZ73
IKLVGERYCKTTDVL

MRPS35

191

P82673
CFIRVIGSELVQKYV

PSMC2

236

P35998
EIEKRGCQVVGLYRL

SYDE2

841

Q5VT97
CQLLTDEVSYRIKEI

TAF6

36

P49848
IAALIRKGEIERCTY

TMEM178B

121

H3BS89
TYGIEAALRVIEKEI

POLR1A

1611

O95602
KRELGCRATYIQTIE

SVIL

1506

O95425
LLKIICGVVTIRTVY

SYNJ2

181

O15056
LLGVVEVYRVTKRVE

SYNRG

1171

Q9UMZ2
DVKYVIDFCLTRTLV

TDRD9

456

Q8NDG6
CVGLEKGTLVLIIYE

TEDDM1

96

Q5T9Z0
GVEYVVGRKNCAILI

NBN

21

O60934
KEYVRCETVRKPAVI

TAF1L

1196

Q8IZX4
CETVRKPAVIDAYVR

TAF1L

1201

Q8IZX4
RCETVRKPAVIDAYV

TAF1

1181

P21675
IRIAALEAVVDYTKV

TAF2

886

Q6P1X5
LLGVFYTVCRDLKEL

ORC5

211

O43913
IVRDIKEKLCYVALD

POTEJ

871

P0CG39
ITETCLAYREKRIGI

TEKT1

111

Q969V4
VCIREAVSQVLKGYD

SOX9

71

P48436
EALIEKLVELCVQYG

POLA2

21

Q14181
VVRRCVKVLAGQEYA

CAMK2A

26

Q9UQM7
EYREKLTIGCRQLVE

SWT1

856

Q5T5J6
AVYPVDCIKSRIQVL

SLC25A15

226

Q9Y619
VVVLTKCDEGVERYI

ARHGAP35

196

Q9NRY4
IVDAACKRRVPVYII

FAM83F

181

Q8NEG4
VVQKGIRYDLCIFRT

SUV39H1

236

O43463
AYRKEVVGLVDDRVC

CHST2

266

Q9Y4C5
ALEAECRKYPVVVIK

CHST7

236

Q9NS84
LKIISVEKCLVRYID

STK31

101

Q9BXU1
KVALLLEVCRDVYAG

RINL

426

Q6ZS11
RYERLQKICSIALVG

CTPS2

291

Q9NRF8
GEEATVKAVIACILY

TRPM6

631

Q9BX84
KCLRGTVAAVYDVTL

AGPAT3

216

Q9NRZ7
AVPAVCKTRTVIYEI

PDGFA

91

P04085
DCVPEERRKLIVAYV

TCERG1

1061

O14776
CLVKYLLSTRVDGQV

RNF222

41

A6NCQ9
VRKIIRVCKGILEYL

VCL

131

P18206
RVCKGILEYLTVAEV

VCL

136

P18206
LYGRKVITENVIVDC

GPLD1

196

P80108
IFLKIRECRVVLVEG

UBR1

1666

Q8IWV7
ESTGVIYRKRIAICQ

PRELID2

46

Q8N945
EYLEKVCSIRVIGES

SNX27

241

Q96L92
GERQKDKLVVLECYV

SPRED2

61

Q7Z698
DKLVVLECYVRKDLV

SPRED2

66

Q7Z698
IDAVLDKLYVCASVE

VPS13C

2041

Q709C8
TCRDIVKEVAKIIYI

PSMA3

186

P25788
VVGLVCLELYKVVQG

UBA1

901

P22314
ELCYKVIVTRESGLQ

TTLL12

96

Q14166
VKAVQVVLRICYSDT

PIAS4

186

Q8N2W9
VGCLKKYDTVLDILR

TOP2A

1006

P11388
IIGELSCLLKREIEY

SLC9C2

946

Q5TAH2
FIIYSIRGDVCDLKV

TPTE2

401

Q6XPS3
GVIELEACIKAVRVL

TRAPPC9

341

Q96Q05
ALYTIRVKDSLICVD

USP18

166

Q9UMW8
LKEITLIVGVVTACY

TMTC3

6

Q6ZXV5
KLYAELCQGIVDIAI

TTL

341

Q8NG68
DVALYVGIVIAVIVC

UNC5C

376

O95185
ELKKYGVTTIVRVCE

PTP4A1

36

Q93096
KLLVVGSYDCTISVR

ZNF106

1671

Q9H2Y7
CVVAAVGKELIIFRL

WDR41

186

Q9HAD4
ITGCDYLLQLKRIVA

WDR64

166

B1ANS9
RLDGTKCYVLVEVKE

MYO9B

56

Q13459