Cluster composition

Functions

CategoryNameIntersectionWithQueryPValueGenesInTermGenesInQueryGenesInTermInQueryID
GeneOntologyCellularComponentcytoplasmic ribonucleoprotein granule

LIMD1 TNRC6C DYRK3 EIF4G1

1.96e-04269234GO:0036464
GeneOntologyCellularComponentribonucleoprotein granule

LIMD1 TNRC6C DYRK3 EIF4G1

2.51e-04287234GO:0035770
HumanPhenoMonotonic speech

LRRK2 EIF4G1

7.73e-05982HP:0031435
HumanPhenoSpastic/hyperactive bladder

LRRK2 EIF4G1

1.18e-041182HP:0005340
DomainGrowth_fac_rcpt_

MEGF8 TIE1 EGFL7

7.83e-04156223IPR009030
DomainCUB

MEGF8 LRP10

1.51e-0349222PF00431
DomainCUB

MEGF8 LRP10

1.57e-0350222SM00042
Domain-

MEGF8 LRP10

1.69e-03522222.60.120.290
DomainCUB

MEGF8 LRP10

1.76e-0353222PS01180
DomainCUB_dom

MEGF8 LRP10

2.03e-0357222IPR000859
DomainEGF_extracell

TIE1 EGFL7

2.25e-0360222IPR013111
DomainEGF_2

TIE1 EGFL7

2.25e-0360222PF07974
DomainEGF_3

MEGF8 TIE1 EGFL7

2.54e-03235223PS50026
DomainEGF

MEGF8 TIE1 EGFL7

2.54e-03235223SM00181
DomainEGF-like_dom

MEGF8 TIE1 EGFL7

2.99e-03249223IPR000742
DomainEGF_1

MEGF8 TIE1 EGFL7

3.20e-03255223PS00022
DomainEGF-like_CS

MEGF8 TIE1 EGFL7

3.41e-03261223IPR013032
DomainEGF_2

MEGF8 TIE1 EGFL7

3.56e-03265223PS01186
DomainCollagen

COL4A4 COL6A5

4.46e-0385222PF01391
DomainCollagen

COL4A4 COL6A5

4.46e-0385222IPR008160
DomainEGF_CA

MEGF8 EGFL7

4.56e-0386222PF07645
DomainEGF_Ca-bd_CS

MEGF8 EGFL7

5.76e-0397222IPR018097
DomainEGF_CA

MEGF8 EGFL7

6.00e-0399222PS01187
DomainASX_HYDROXYL

MEGF8 EGFL7

6.11e-03100222PS00010
DomainEGF-type_Asp/Asn_hydroxyl_site

MEGF8 EGFL7

6.84e-03106222IPR000152
DomainEGF_CA

MEGF8 EGFL7

8.98e-03122222SM00179
DomainEGF-like_Ca-bd_dom

MEGF8 EGFL7

9.26e-03124222IPR001881
DomainProtein_kinase_ATP_BS

TIE1 DYRK3 LRRK2

9.59e-03379223IPR017441
DomainPROTEIN_KINASE_ATP

TIE1 DYRK3 LRRK2

1.60e-02459223PS00107
DomainProt_kinase_dom

TIE1 DYRK3 LRRK2

1.90e-02489223IPR000719
PathwayREACTOME_NCAM1_INTERACTIONS

COL4A4 COL6A5

1.99e-0420152MM15061
PathwayREACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH

COL4A4 COL6A5

7.27e-0438152MM14969
PathwayREACTOME_COLLAGEN_CHAIN_TRIMERIZATION

COL4A4 COL6A5

8.46e-0441152MM15538
PathwayREACTOME_NCAM1_INTERACTIONS

COL4A4 COL6A5

8.88e-0442152M7169
PathwayREACTOME_COLLAGEN_CHAIN_TRIMERIZATION

COL4A4 COL6A5

9.74e-0444152M27812
PathwayREACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES

COL4A4 COL6A5

1.26e-0350152MM14796
PathwayREACTOME_COLLAGEN_DEGRADATION

COL4A4 COL6A5

1.41e-0353152MM14566
PathwayREACTOME_SIGNALING_BY_PDGF

COL4A4 COL6A5

1.63e-0357152MM14713
PathwayREACTOME_SIGNALING_BY_PDGF

COL4A4 COL6A5

1.69e-0358152M2049
PathwayREACTOME_ASSEMBLY_OF_COLLAGEN_FIBRILS_AND_OTHER_MULTIMERIC_STRUCTURES

COL4A4 COL6A5

1.87e-0361152M27103
PathwayREACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES

COL4A4 COL6A5

1.87e-0361152MM14637
PathwayREACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH

COL4A4 COL6A5

1.99e-0363152M11187
PathwayREACTOME_COLLAGEN_DEGRADATION

COL4A4 COL6A5

2.05e-0364152M26953
PathwayREACTOME_COLLAGEN_BIOSYNTHESIS_AND_MODIFYING_ENZYMES

COL4A4 COL6A5

2.25e-0367152M26999
PathwayREACTOME_COLLAGEN_FORMATION

COL4A4 COL6A5

2.88e-0376152MM14573
PathwayREACTOME_ECM_PROTEOGLYCANS

COL4A4 COL6A5

2.88e-0376152M27219
PathwayREACTOME_INTEGRIN_CELL_SURFACE_INTERACTIONS

COL4A4 COL6A5

2.88e-0376152MM14867
Pubmed

Genetics and clinical characteristics of keratoconus.

COL4A4 VSX1

2.74e-06424220664914
Pubmed

A DDX6-CNOT1 complex and W-binding pockets in CNOT9 reveal direct links between miRNA target recognition and silencing.

TNRC6C EIF4G1

1.27e-05824224768540
Pubmed

Mammalian miRNA RISC recruits CAF1 and PABP to affect PABP-dependent deadenylation.

TNRC6C EIF4G1

4.13e-051424219716330
Pubmed

A dual-activity topoisomerase complex regulates mRNA translation and turnover.

MEGF8 PCNX3 TRNP1 TNRC6C EIF4G1 USP40

8.36e-05110524635748872
Pubmed

Gsg1, Trnp1, and Tmem215 Mark Subpopulations of Bipolar Interneurons in the Mouse Retina.

TRNP1 VSX1

1.36e-042524228199486
Pubmed

Interrogating translational efficiency and lineage-specific transcriptomes using ribosome affinity purification.

TIE1 EGFL7

1.83e-042924224003143
Pubmed

The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices.

COL4A4 COL6A5 EGFL7

2.04e-0416724322159717
Pubmed

Secondary Placental Defects in Cxadr Mutant Mice.

TIE1 EGFL7

2.24e-043224231338035
Pubmed

Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression.

COL4A4 COL6A5 EGFL7

2.34e-0417524328071719
Pubmed

Thyroid follicle development requires Smad1/5- and endothelial cell-dependent basement membrane assembly.

TIE1 COL4A4

3.50e-044024227068110
Cytoband1q32.1

GPR25 DYRK3

1.46e-031082421q32.1
CytobandEnsembl 112 genes in cytogenetic band chr1q32

GPR25 DYRK3

1.00e-02290242chr1q32
GeneFamilyParkinson disease associated genes

LRRK2 EIF4G1

6.64e-0516142672
GeneFamilyCollagens

COL4A4 COL6A5

5.65e-0446142490
CoexpressionGSE26669_CTRL_VS_COSTIM_BLOCK_MLR_CD8_TCELL_DN

PCNX3 LRP10 LY86 SLC4A3 LRRK2

9.29e-07200245M4667
ToppCellThalamus-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Myoc_(Myoc)|Thalamus / BrainAtlas - Mouse McCarroll V32

ECRG4 CREB3L4 VSX1

2.15e-051012431d74f6b30d23e942f26fc57665b5c533ff0c089f
ToppCellThalamus-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Myoc_(Myoc)--|Thalamus / BrainAtlas - Mouse McCarroll V32

ECRG4 CREB3L4 VSX1

2.15e-05101243578946c048084f48a74d4352743017f04039d5e8
ToppCellThalamus-Macroglia-ASTROCYTE-Gja1-Astrocyte.Gja1.Myoc_(Myoc)-|Thalamus / BrainAtlas - Mouse McCarroll V32

ECRG4 CREB3L4 VSX1

2.15e-051012438a3b8abe06a8c5b546ce40c9429401058fe671d7
ToppCell3'-GW_trimst-2-SmallIntestine-Hematopoietic-Myeloid-cDC1|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A4 LY86 LRRK2

8.15e-0515824378a8a498a9c84ed65e0eefaac781d5247c5b477a
ToppCell10x5'v1-week_17-19-Lymphocytic_B-B_lineage-pro_B_progenitor|week_17-19 / cell types per 3 fetal stages;per 3',per 5'

CREB3L4 C19orf73 EGFL7

8.46e-0516024330b7f24e0c3ecfa618b4e31678e18c8a4405a8d7
ToppCellPBMC_fresh-frozen-Severe-critical_progression_d03-09-Lymphocytic-Lymphocytic_ILC-NK_cell-NK_c02-NCAM1|Severe-critical_progression_d03-09 / Compartment, severity and other cell annotations on 10x 3' data (130k)

TIE1 COL4A4 VSX1

8.93e-051632431c014e373667be290d7fb5d24c06c6f313ac8fa3
ToppCelldroplet-Liver-LIVER_HEPATOCYTES-30m-Myeloid-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 TRNP1 SLC4A3

9.60e-05167243cf6206c506715cd846799c62cf7c06e3fa99f7af
ToppCelldroplet-Liver-LIVER_HEPATOCYTES-30m-Myeloid-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 TRNP1 SLC4A3

9.94e-0516924330141f76e9bfc2b4586429857c72dbc85ba65cc9
ToppCellASK440-Epithelial-Transformed_epithelium|ASK440 / Donor, Lineage and Cell class of Lung cells from Dropseq

TRNP1 COL6A5 DYRK3

1.05e-04172243df3800bcd9777d02900eba0cfc26ab73de8a1d95
ToppCelldroplet-Fat-SCAT-30m-Endothelial-nan|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 EGFL7 VSX1

1.07e-04173243eb58b0189e71e38d4f4f1cf544a82cde8d1c86bc
ToppCell5'-GW_trimst-2-LymphNode-Endothelial-blood_vessel_EC-Fetal_venous_EC|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

GPR25 TIE1 EGFL7

1.08e-041742436b5ff1cc5fe6705f7ea70b5a892dfbf91e32288d
ToppCellP03-Mesenchymal-developing_mesenchymal_cell-mesenchymal_immature_unknown_1|P03 / developmental_time, Lineage, Cell group, Cell type, Cell type_cellcyc-phase

LIMD1 TIE1 EGFL7

1.10e-04175243282f09bbdfa70d93b3f66591dcfb84c5ee0268c7
ToppCellfacs-Heart-LV|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 EGFL7 DYRK3

1.12e-04176243483e36d9bb7268bf179e69a65e1a0be099035162
ToppCelldroplet-Liver-LIVER_HEP-30m-Myeloid-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 CREB3L4 SLC4A3

1.12e-041762435e46a09a36b9645b1b1fcb0b64bd0898561af3a9
ToppCell3'-Adult-SmallIntestine-Hematopoietic-B_cells-Memory_B|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A4 LY86 LRRK2

1.14e-041772430d1c39e99144fdb9c7f6f98a1ade41c73db45b65
ToppCellControl|World / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

TIE1 COL4A4 EGFL7

1.14e-04177243b8ff6940e31b749776e81ae4f5bbd577dba9749c
ToppCell3'-Adult-SmallIntestine-Hematopoietic|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A4 LY86 LRRK2

1.16e-04178243da1695a936dbe3ca9ee3fb28ceb60511c47b35f8
ToppCell3'-Adult-SmallIntestine-Hematopoietic-B_cells|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

COL4A4 LY86 LRRK2

1.16e-04178243580fc1d45b82010c665a313b2e7a21e0116819ef
ToppCell3'-Broncho-tracheal-Endothelial-Lymphatic_EC-endothelial_cell_of_lymphatic_vessel-Lymphatic_EC_mature-Lymphatic_EC_mature_L.2.5.0.0|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

TIE1 EGFL7 VSX1

1.28e-04184243968afa6b5ba84169377a24c150bb68749fa674d9
ToppCell3'-Broncho-tracheal-Endothelial-Lymphatic_EC|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

TIE1 EGFL7 VSX1

1.28e-0418424315cbddea9efb2346a2028d77edfe9ba32923568f
ToppCell3'-Broncho-tracheal-Endothelial-Lymphatic_EC-endothelial_cell_of_lymphatic_vessel|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

TIE1 EGFL7 VSX1

1.28e-041842430087c605c161fd8a39aa394f51994a04e8353bf1
ToppCell3'-Broncho-tracheal-Endothelial-Lymphatic_EC-endothelial_cell_of_lymphatic_vessel-Lymphatic_EC_mature|3' / 5'-vs-3', Tissue groups, Lineages, Lineage subclass, Cell_type2, Cell_subtype2_L4.5

TIE1 EGFL7 VSX1

1.28e-04184243920f95625978132c2b6c76654ef6298244103e2d
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Epithelial|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 COL6A5 DYRK3

1.28e-04184243d7eccbd21c480d907fdc8eff2bf5ae22ae452221
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Epithelial-neuroepithelial_cell|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 COL6A5 DYRK3

1.28e-0418424322010cfe0428ebfa40952cc1a1a12ad3d25b35c9
ToppCellfacs-Brain_Non-Myeloid-Striatum-24m-Epithelial-nan|Brain_Non-Myeloid / Brain_Non-Myeloid_Brain_Myeloid - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 COL6A5 DYRK3

1.28e-04184243264e14aa1859cfc0ed5fb40e97ea189aed9ef4a5
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 COL4A4 EGFL7

1.32e-0418624390d53c2597a9f3a2b39afba75adfc54f1ca0a4db
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 COL4A4 EGFL7

1.32e-041862432cae34336f184f971f7c8684cc27c23a4e7369ed
ToppCell10x5'-Liver-Myeloid_Dendritic-DC1|Liver / Manually curated celltypes from each tissue

LY86 SLC4A3 LRRK2

1.32e-04186243e823529ffd06352c6bdec102f221fdf27f7c7369
ToppCelldroplet-Liver-Hepatocytes-24m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 COL4A4 EGFL7

1.38e-04189243ce5b3d53c9a5457a5a02b221dee18334b5eaf8b7
ToppCelldroplet-Lung-18m-Mesenchymal-fibroblast-adventitial_fibroblast-adventitial_fibroblast_l17|18m / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

ECRG4 TRNP1 SLC4A3

1.43e-04191243b51e0f5d1b93f526160c904e9091313a5364f3a7
ToppCell10x5'-GI_large-bowel-Lymphocytic_B-Memory_B_cells|GI_large-bowel / Manually curated celltypes from each tissue

COL4A4 LY86 LRRK2

1.45e-0419224331f7245bce79969674a775ecf175e7c6af68b503
ToppCellfacs-Liver-Non-hepatocytes-24m-Endothelial|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 COL4A4 EGFL7

1.45e-04192243d525f7f088a53110912600a7c9f6d33b9270d534
ToppCellhuman_hepatoblastoma-Endothelial_cells|human_hepatoblastoma / Sample and Cell Type and Tumor Cluster (all cells)

TIE1 EGFL7 DYRK3

1.45e-04192243e09f609fed033a25baacaf4a07bbbae1076da366
ToppCellfacs-Liver-Non-hepatocytes-24m-Endothelial-endothelial_cell_of_hepatic_sinusoid|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 COL4A4 EGFL7

1.45e-041922432bfac6b3956265205ca47d06888851ed68b65999
ToppCellCF-Lymphoid-B_cell|Lymphoid / Disease state, Lineage and Cell class

COL4A4 LY86 LRRK2

1.47e-041932437ebf20344a9a154fd2cffa281526867fcf0aded3
ToppCellproximal-Endothelial-Lymphatic|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

TIE1 EGFL7 VSX1

1.56e-041972438835961bd734a86063fd854cd2fb7028aefb7a72
ToppCellproximal-3-Endothelial-Lymphatic|3 / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

TIE1 EGFL7 VSX1

1.56e-041972431c64e4eb9bfbaf5d6b4349642858f83a00d4d4c6
ToppCellPBMC_fresh-frozen-Mild-Moderate_progression_d12-25-Myeloid-Monocytic-Classical_Monocyte-Mono_c3-CD14-VCAN|Mild-Moderate_progression_d12-25 / Compartment, severity and other cell annotations on 10x 3' data (130k)

CTSA LY86 LRRK2

1.56e-04197243280804810041783f1b7704914b62ffefbb0d88f6
ToppCellproximal-Endothelial-Lymphatic-3|proximal / Location, Lineage, Cell class (ontology) and Donor from 10X sequencing (macrophage renamed)

TIE1 EGFL7 VSX1

1.56e-041972438d79e747e344656e2bfc7fe872b4430dca941196
ToppCellfacs-Lung-18m|Lung / method, tissue, age, lineage, sublineage, cell ontologies, cell type and subtype

TIE1 LRP10 EIF4G1

1.61e-04199243c11e0044d3cc37f6bb26df033ad4448b419addfc
ToppCell(7)_Epithelial_cells-(7)_Epithelial-A_(AT2)|(7)_Epithelial_cells / Lung cell shreds - cell class (v4) and cell subclass (v4)

LIMD1 EGFL7 LRRK2

1.61e-0419924309cf004032e5af912ee0cdde6e24ce3bcf7673cd
ToppCellControl_saline|World / Treatment groups by lineage, cell group, cell type

TIE1 COL4A4 EGFL7

1.61e-0419924311c9c1779caceb725ecccf3f23b7d4e6dbd1af64
ToppCellParenchymal|World / Cell types per location group and 10X technology with lineage, and cell group designations

COL4A4 EGFL7 LRRK2

1.61e-04199243cce684df78421b814083aed16c4cbbac5f287bbc
ToppCell3'-Adult-LargeIntestine-Endothelial-blood_vessel_EC-Mature_arterial_EC|Adult / Celltypes from developing, pediatric, Crohn's, & adult GI tract

TIE1 EGFL7 LRRK2

1.61e-041992430075bcc7d2a5031e76a24cb176e16ac998d846fd
ToppCell367C-Myeloid-Macrophage-SPP1+_Macrophage_4|Macrophage / Donor, Lineage, Cell class and subclass (all cells)

COL4A4 TRNP1

8.61e-04812428cb94dda18010b3b05e5ab72235850483013c03a
ToppCellBronchus_Control_(B.)-Endothelial-TX-Endothelial-2|Bronchus_Control_(B.) / Sample group, Lineage and Cell type

CREB3L4 EGFL7

8.61e-0481242a1193b2cfb84a6b6593779fef5f54a61567a12d7
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Stem_cells-ectodermal/neuroectodermal-like_cells|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

ECRG4 VSX1

9.04e-04832426782bfb4d1391949cb001f96fd9c9585392722a6
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_2-Mgp-Endothelial_Tip.Dcn.Mgp-Penk_(Penk)|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

1.16e-03942428fb9adf0db3b0007204716869d895700cbdc6231
ToppCell367C-Myeloid-Macrophage-SPP1+_Macrophage_4|Myeloid / Donor, Lineage, Cell class and subclass (all cells)

COL4A4 TRNP1

1.21e-03962427e02df1f28fea1d962f9b1d3835212765a6642cc
ToppCellLPS-IL1RA+antiTNF-Epithelial_alveolar-Mes-Like-Differentiating_AT1|LPS-IL1RA+antiTNF / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL4A4 TRNP1

1.52e-03108242d620f07243c2628494e689bbfabc14c453f4b1f4
ToppCellPND07-28-samps-Myeloid-Macrophage-macrophage-A|PND07-28-samps / Age Group, Lineage, Cell class and subclass

TRNP1 COL6A5

1.64e-03112242d21cfcb04a27cc9fb74e0c2afa8a8cdfb886ae21
ToppCellFrontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_2-Endothelial_Tip.Dcn.1500015O10Rik_(1500015O10Rik)-|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

1.69e-03114242c3feca81edee445cbe5e46a07e1a59327dc2e981
ToppCellFrontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_2-Endothelial_Tip.Dcn.1500015O10Rik_(1500015O10Rik)|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

1.69e-0311424289350483d2ce57afc612fe25398e35af121d50f0
ToppCellBrain_organoid-organoid_Kanton_Nature-Organoid-2M-Stem_cells|Organoid-2M / Sample Type, Dataset, Time_group, and Cell type.

ECRG4 VSX1

1.72e-03115242f3062a7247b376e9978dc01109fb94d6dd960052
ToppCellLPS-IL1RA-Endothelial-Epi-like|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL4A4 EGFL7

1.75e-03116242cf4e3c34570f57502ec524881d351ef8e47976d2
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_2-Mgp|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

2.00e-03124242b0ed84522180f8cea541461faf7882c57abf8cd4
ToppCellEndothelial-G|World / shred on cell class and cell subclass (v4)

TIE1 EGFL7

2.00e-031242424b72809463f2986b7d1b7ab9de633ac4d7854a92
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_2|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

2.00e-03124242231862f849d8ab73c6a44c782d33ef2f07661baf
ToppCellTCGA-Brain-Primary_Tumor-Low_Grade_Glioma-Oligodendroglioma-2|TCGA-Brain / Sample_Type by Project: Shred V9

CREB3L4 COL4A4

2.09e-03127242018ffd9ff1913787cb0086a8581b399a121eaba1
ToppCellFrontal_cortex-Endothelial-ENDOTHELIAL_STALK-Flt1_2|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

TIE1 CREB3L4

2.23e-03131242d5bc40cd585582856881081b7130dec3515b4ae0
ToppCelldroplet-Heart-4Chambers-21m-Endothelial-nan|Heart / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

TIE1 EGFL7

2.26e-03132242fc79898eeb39c26505cf04df95c3dd75a6593295
ToppCellFrontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2-Dcn_2_2|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

2.36e-031352424451c44f3ad788437f4e2ae81049fbbab53f967e
ToppCellFrontal_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2|Frontal_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

2.36e-0313524245f67f33c8320d9fb6dbceae603b564f6a8ffd1e
ToppCell3'-GW_trimst-2-SmallIntestine-Mesenchymal-immature_mesenchymal_cell-Mesoderm_1_(HAND1+)|GW_trimst-2 / Celltypes from developing, pediatric, Crohn's, & adult GI tract

MEGF8 COL4A4

2.36e-031352425113bb1713f99d01103b9a99de5d80393081cf87
ToppCellLPS-IL1RA-Endothelial-Epi-like-Alv_Cap|LPS-IL1RA / V2 postpublication: Rhesus Genome Updated; Treatment groups by lineage, cell_type_level1, cell_type_level2

COL4A4 EGFL7

2.47e-031382425f8ac8f67e34a7cf560099208e6884102532391e
ToppCell10x5'v1-week_12-13-Myeloid_DC-DC-DC3|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

TRNP1 LY86

2.50e-03139242c320847311ba9a844fc4760251372a2a9152787b
ToppCellLA-15._Ventricular_Cardiomyocyte_III|World / Chamber and Cluster_Paper

ECRG4 CREB3L4

2.50e-031392429e2a84d5ed7232b70eadbba754d9ca13f2d50fe9
ToppCellPND07-28-samps-Endothelial-Postnatal_endothelial-endothelial_cells_D|PND07-28-samps / Age Group, Lineage, Cell class and subclass

TIE1 EGFL7

2.54e-03140242b9aeb7dda7f377b580dd8a44912f300721437387
ToppCellSmart-seq2-tissue-resident_(Smart-seq2)-myeloid-myeloid_dendritic-dendritic_cell|tissue-resident_(Smart-seq2) / Per Platform+tissue_group, by lineage_subgroup, cell_group, cell_type

LY86 SLC4A3

2.61e-031422428b5441d0564e67ab4db58d9082909b5dab430a28
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW16-OPC_related-Oligodendrocyte/OPC|GW16 / Sample Type, Dataset, Time_group, and Cell type.

LIMD1 DYRK3

2.61e-0314224243e72e4b9ae33768672ef90c8bbfd2ca1818c746
ToppCellFetal_brain-organoid_Tanaka_cellReport-GW16-OPC_related|GW16 / Sample Type, Dataset, Time_group, and Cell type.

LIMD1 DYRK3

2.61e-03142242d2d150e3019a5b7b143e50b1c1c2b6764abf36bf
ToppCellPND07-Immune-Immune_Myeloid-DC-cDC2-cDC2_mature|PND07 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CTSA LY86

2.68e-03144242f5d0d0564fcbec8a5d87119e0807b619faa77b0f
ToppCell10x3'2.3-week_12-13-Myeloid_DC-DC-tDC|week_12-13 / cell types per 3 fetal stages;per 3',per 5'

LIMD1 SLC4A3

2.72e-03145242a6c291811bf62f1c13f1b4b396d75c2223cf1c7d
ToppCellTCGA-Blood_and_Bone_Marrow-Primary_Blood_Derived_Cancer_-_Peripheral_Blood-Leukemia-Acute_Myeloid_Leukemia-7|TCGA-Blood_and_Bone_Marrow / Sample_Type by Project: Shred V9

EGFL7 DYRK3

2.72e-0314524288090a226ddfa6df59976f025bf0fd84ca0f72ef
ToppCellkidney_cells-Hypertensive_with+without-CKD-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_3|Hypertensive_with+without-CKD / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A4 LRRK2

2.72e-031452428da10bc6611976e1ec85e09f04a2dc5bf6555c9e
ToppCellPND14-Endothelial-Endothelial_blood-vessel-Microvascular_EC-CAP1-CAP1_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

TIE1 EGFL7

2.75e-031462422d907e50206c4762a8baa741363bc7f0a04bd84e
ToppCellPND03-Immune-Immune_Myeloid-DC-cDC2-cDC2_mature|PND03 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CTSA LY86

2.83e-031482423f48f5ba0a0928ddf6da7a1be1976933921f42ad
ToppCellBAL-Mild-Myeloid-cDC-cDC-cDC_4|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

CREB3L4 LRRK2

2.87e-03149242a85a051e0d82430160967e72fa04b55f43e84513
ToppCellLymphoid-Lymphoid-B_cells|Lymphoid / shred on cell class and cell subclass (v4)

LIMD1 LY86

2.90e-031502425ebf6b4b9b029422a4676ba09a6a9225bd25db47
ToppCellPND14-Immune-Immune_Lymphocytic_T/NK-Lymphocytic_T-CD4_T-CD4_T_prolif|PND14 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

GPR25 TRNP1

2.90e-031502427bc61eb4b8c4a1909f4b7bcd1c6a88ef46102669
ToppCellChildren_(3_yrs)-Endothelial-endothelial_cell_of_vein-D046|Children_(3_yrs) / Lineage, Cell type, age group and donor

TIE1 EGFL7

2.90e-031502424f31867cb85253ff6d22f3b02ef972a42cb41123
ToppCelldroplet-Fat-Scat-21m-Myeloid-monocyte|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LY86 COL6A5

2.90e-03150242b6e5e04aaf1c5265ac07581868d3159f9292a84c
ToppCellBAL-Mild-Myeloid-cDC-cDC-cDC_4|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

CREB3L4 LRRK2

2.90e-031502427a381f5ae94eba5eb60dcbf83416b4eb18c279ea
ToppCellrenal_medulla_nuclei-Renal_AKI_(acute_kidney_injury)-Epithelial-Intermediate_tubule_epithelial_cell-kidney_loop_of_Henle_thin_descending_limb_epithelial_cell-Descending_Thin_Limb_Cell_Type_3|Renal_AKI_(acute_kidney_injury) / Celltypes from Cells and Nuclei per compartment and clinical group

COL4A4 LRRK2

2.94e-0315124216fc903fc71e25717b9908416f0bcd29c0a65a61
ToppCellFetal_29-31_weeks-Endothelial-endothelial_cell_of_artery-D088|Fetal_29-31_weeks / Lineage, Cell type, age group and donor

TIE1 EGFL7

2.94e-031512423b4c57bad61e17a573e6f8dc6b917fba5fd56c43
ToppCellfacs-Lung-EPCAM-24m-Mesenchymal-pulmonary_interstitial_fibroblast|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 DYRK3

2.94e-03151242523dcd243c285a6b74830a93c82cca8784edd658
ToppCellfacs-Lung-EPCAM-24m-Mesenchymal-Myofibroblast|Lung / Lung_Trachea - method, tissue, subtissue, age, lineage, cell ontology and free annotation

ECRG4 DYRK3

2.94e-03151242f3406094ce79cc80398b82d58ca6fd87a96e68d4
ToppCelldroplet-Fat-Scat-21m-Myeloid-nan|Fat / Fat_BAT_GAT_MAT_SCAT - method, tissue, subtissue, age, lineage, cell ontology and free annotation

LY86 COL6A5

2.94e-0315124279827a76c675dcb82f59c0a45d0f962b02d5bfd6
ToppCellfacs-Marrow-T-cells-24m-Myeloid-monocyte_+_promonocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CTSA LY86

2.98e-03152242d279592c501fca9cb474ad916fea32282e6969cb
ToppCellfacs-Marrow-T-cells-24m-Myeloid-promonocyte|Marrow / Spleen_Marrow_Thymus - method, tissue, subtissue, age, lineage, cell ontology and free annotation

CTSA LY86

2.98e-031522423b59143b2b4ee24eb6378f87ff568124193256e9
ToppCellPosterior_cortex-Endothelial-ENDOTHELIAL_TIP-Dcn_2|Posterior_cortex / BrainAtlas - Mouse McCarroll V32

ECRG4 VSX1

3.02e-03153242151c469b26f9adf04dd6f117f03bef760cc3d45d
ToppCellE18.5-Immune-Immune_Myeloid-Monocytic-Macrophage-IM-IM_prolif|E18.5 / Age_group by Lineage, Lineage_subclass, Cell_type, subtypes-by-prolif

CTSA LY86

3.06e-0315424279ebda35dd1719e157738d7c13e5b8ccc3991f03
ToppCell10x5'-bone_marrow-Lymphocytic_B-Pro-B|bone_marrow / Manually curated celltypes from each tissue

EGFL7 DYRK3

3.06e-031542428a8c3851888ab86ca2b13ccc042cde1fef8d88f8
ToppCellE16.5-samps-Endothelial-Immature_fetal_endothelial-Matrix_Endothelial|E16.5-samps / Age Group, Lineage, Cell class and subclass

TIE1 EGFL7

3.06e-03154242928f49839b046b90c2f942458f3e365ddc4e0bc9
ToppCelldroplet-Liver-Npc-21m-Myeloid-Kupffer_cell|Liver / Large_Intestine_Pancreas_Liver - method, tissue, subtissue, age, lineage, cell ontology and free annotation

COL4A4 LY86

3.10e-031552425d600e159738231d0607ea1a1ebd8510fc241b36
ToppCellPBMC-Mild-Myeloid-cDC-cDC-cDC_3|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.01)

LY86 SLC4A3

3.10e-031552429a27558c457f05808af07190b7a5006b047f1d58
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb-24m-Myeloid-macrophage|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GPR25 LY86

3.10e-03155242d2e489a08b4e711bd2ed483dcc4da7dbbaa4feea
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb-24m-Myeloid|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GPR25 LY86

3.10e-03155242cb456d6f13bfb5cb400c0840a0ab6ba4616dcf37
ToppCellfacs-Limb_Muscle-ForelimbandHindlimb-24m-Myeloid-nan|Limb_Muscle / Tongue_Heart_Limb_Muscle_Aorta_Diaphragm - method, tissue, subtissue, age, lineage, cell ontology and free annotation

GPR25 LY86

3.10e-03155242a547fdcd974b0813ce6c8cccfec9fff74cac2d1a
ToppCellPBMC-Mild-Myeloid-cDC-cDC-cDC_3|Mild / Location, Disease Group, Cell group, Cell class and sub_cluster (2021.03.09)

LY86 SLC4A3

3.10e-03155242ab539c04f10276ae919d82b1c75f99a84eb695bf

Protein segments in the cluster

PeptideGeneStartEntry
IGSLGGLCGLFGLPW

SLC4A3

1031

P48751
GWKRTSGLPGACGAA

EGFL7

91

Q9UHF1
LLCWGPGGISGNKLK

ECRG4

21

Q9H1Z8
LGGRWPFGDGLCKLS

GPR25

101

O00155
QGSKGDLGLPGWLGT

COL4A4

511

P53420
WDRPCGLGSGLGAGE

LRP10

311

Q7Z4F1
CKEGPLGWSSDGSLG

LIMD1

401

Q9UGP4
WTLIFPSCSGGGGGK

LY86

11

O95711
LLSSEGPSGKWSLGG

PCNX3

1926

Q9H6A9
GGNCSLWVGEGLGLP

MEGF8

1046

Q7Z7M0
GGFCIGKVEPSWLGP

LRRK2

806

Q5S007
GGGGWADPRTCLSLL

IKBIP

36

Q70UQ0
WLNGGPGCSSLDGLL

CTSA

81

P10619
IAGCPGAWGQKGLKG

COL6A5

1441

A8TX70
TGSGCVSGLWRKGLG

C19orf73

81

Q9NVV2
LSWGKGSSGGSGAKP

EIF4G1

1091

Q04637
GLQGWKSGGDRGCGL

CREB3L4

46

Q8TEY5
GPPGSKDWGTALKGC

DYRK3

476

O43781
PCLGGKGSSELLWGG

TNRC6C

1636

Q9HCJ0
GPCALLWKGGDSPGQ

SPATA31E1

1166

Q6ZUB1
AEGGLLGSCAPWLLG

VSX1

256

Q9NZR4
GAGRWGPGCTKECPG

TIE1

216

P35590
ASALGLGGCVPWGAG

TRNP1

186

Q6NT89
SAGCPGGEGWTAIPK

USP40

691

Q9NVE5